MoFEM Namespace Reference

implementation of Data Operators for Forces and Sources More...

Namespaces
namespace	BcManagerImplTools
namespace	DemkowiczHexAndQuad
namespace	Exceptions
	Exceptions and handling errors data structures.
namespace	IntRules
namespace	LogKeywords
namespace	Types
	Types.

Classes
struct	AccelerationCubitBcData
	Definition of the acceleration bc data structure. More...
struct	AddEssentialToLhsPipelineImpl
	Function (factory) for setting operators for lhs pipeline. More...
struct	AddEssentialToLhsPipelineImpl< OpEssentialLhsImpl< DisplacementCubitBcData, BASE_DIM, FIELD_DIM, A, I, OpBase >, A, I, OpBase >
struct	AddEssentialToLhsPipelineImpl< OpEssentialLhsImpl< HeatFluxCubitBcData, BASE_DIM, FIELD_DIM, A, I, OpBase >, A, I, OpBase >
struct	AddEssentialToRhsPipelineImpl
	Function (factory) for setting operators for rhs pipeline. More...
struct	AddEssentialToRhsPipelineImpl< OpEssentialRhsImpl< DisplacementCubitBcData, BASE_DIM, FIELD_DIM, A, I, OpBase >, A, I, OpBase >
struct	AddEssentialToRhsPipelineImpl< OpEssentialRhsImpl< HeatFluxCubitBcData, BASE_DIM, FIELD_DIM, A, I, OpBase >, A, I, OpBase >
struct	AddFluxToLhsPipelineImpl
struct	AddFluxToRhsPipelineImpl
struct	AddFluxToRhsPipelineImpl< MoFEM::OpFluxRhsImpl< ThermoElasticOps::SetTargetTemperature, 1, 1, A, I, OpBase >, A, I, OpBase >
struct	AddFluxToRhsPipelineImpl< OpFluxRhsImpl< NaturalForceMeshsets, BASE_DIM, FIELD_DIM, A, I, OpBase >, A, I, OpBase >
struct	AddFluxToRhsPipelineImpl< OpFluxRhsImpl< NaturalForceMeshsetsScalarAndVectorScaling, BASE_DIM, FIELD_DIM, A, I, OpBase >, A, I, OpBase >
struct	AddFluxToRhsPipelineImpl< OpFluxRhsImpl< NaturalMeshsetType< BCTYPE >, BASE_DIM, FIELD_DIM, A, I, OpBase >, A, I, OpBase >
struct	AddFluxToRhsPipelineImpl< OpFluxRhsImpl< NaturalMeshsetTypeVectorScaling< BCTYPE >, BASE_DIM, FIELD_DIM, A, I, OpBase >, A, I, OpBase >
struct	AddFluxToRhsPipelineImpl< OpFluxRhsImpl< NaturalTemperatureMeshsets, BASE_DIM, FIELD_DIM, A, I, OpBase >, A, I, OpBase >
struct	AddHOOps
	Add operators pushing bases from local to physical configuration. More...
struct	AddHOOps< 1, 2, 2 >
struct	AddHOOps< 1, 3, 3 >
struct	AddHOOps< 2, 2, 2 >
struct	AddHOOps< 2, 3, 3 >
struct	AddHOOps< 3, 3, 3 >
struct	AssemblyTypeSelector
struct	BaseFunction
	Base class if inherited used to calculate base functions. More...
struct	BaseFunctionCtx
	Base class used to exchange data between element data structures and class calculating base functions. More...
struct	BaseFunctionUnknownInterface
struct	BasicEntityData
	PipelineManager data. like access to moab interface and basic tag handlers. More...
struct	BasicMethod
	Data structure to exchange data between mofem and User Loop Methods. More...
struct	BasicMethodPtr
struct	BcDisplacementMeshsetType
struct	BcFluxMeshsetType
struct	BcForceMeshsetType
struct	BcManager
	Simple interface for fast problem set-up. More...
struct	BcMeshsetType
struct	BcScalarMeshsetType
struct	BernsteinBezier
	Evaluating BB polynomial. More...
struct	BitFEId_mi_tag
struct	BitFieldId_mi_tag
struct	BitFieldId_space_mi_tag
struct	BitProblemId_mi_tag
struct	BitRefManager
	Managing BitRefLevels. More...
struct	Block_BodyForces
	Body force data structure. More...
struct	BlockData
struct	BlockMatData
struct	BlockSetAttributes
	Arbitrary block attributes data structure. More...
struct	CfgCubitBcData
	Definition of the cfd_bc data structure. More...
struct	CommInterface
	Managing BitRefLevels. More...
struct	ComposedProblemsData
struct	Composite_Cubit_msId_And_MeshsetType_mi_tag
struct	Composite_Ent_And_EntDofIdx_mi_tag
struct	Composite_Ent_and_ShortId_mi_tag
struct	Composite_Ent_Order_And_CoeffIdx_mi_tag
struct	Composite_EntType_and_ParentEntType_mi_tag
struct	Composite_EntType_and_Space_mi_tag
struct	Composite_mi_tag
struct	Composite_Name_And_Ent_And_EntDofIdx_mi_tag
struct	Composite_Name_And_Ent_mi_tag
struct	Composite_Name_And_Part_mi_tag
struct	Composite_Name_Ent_And_Part_mi_tag
struct	Composite_Name_Ent_Order_And_CoeffIdx_mi_tag
struct	Composite_ParentEnt_And_BitsOfRefinedEdges_mi_tag
struct	Composite_ParentEnt_And_EntType_mi_tag
struct	Composite_Part_And_Order_mi_tag
struct	Composite_SeriesID_And_Step_mi_tag
struct	Composite_SeriesName_And_Step_mi_tag
struct	Composite_SeriesName_And_Time_mi_tag
struct	Composite_Unique_mi_tag
struct	ContactPrismElementForcesAndSourcesCore
	ContactPrism finite element. More...
struct	CoreInterface
	Interface. More...
struct	CoreTmp
struct	CoreTmp< 0 >
	Core (interface) class. More...
struct	CoreTmp<-1 >
struct	CoreValue
struct	CreateRowComressedADJMatrix
	Create compressed matrix. More...
struct	CubitMeshsetMaskedType_mi_tag
struct	CubitMeshSets
	this struct keeps basic methods for moab meshset about material and boundary conditions More...
struct	CubitMeshSets_change_add_bit_to_cubit_bc_type
	change meshset type More...
struct	CubitMeshSets_change_attributes
struct	CubitMeshSets_change_attributes_data_structure
struct	CubitMeshSets_change_bc_data_structure
struct	CubitMeshSets_change_name
	change meshset name More...
struct	CubitMeshsets_name
struct	CubitMeshsetType_mi_tag
	MultiIndex Tag for field id. More...
struct	CutMeshInterface
	Interface to cut meshes. More...
struct	DataOperator
	base operator to do operations at Gauss Pt. level More...
struct	DefaultElementAdjacency
	default adjacency map More...
struct	DeprecatedCoreInterface
	Deprecated interface functions. More...
struct	DerivedEntitiesFieldData
	this class derive data form other data structure More...
struct	DisplacementCubitBcData
	Definition of the displacement bc data structure. More...
struct	DisplacementCubitBcDataWithRotation
	A specialized version of DisplacementCubitBcData that includes an additional rotation offset. More...
struct	DMCtx
	PETSc Discrete Manager data structure. More...
struct	DOF_Unique_mi_tag
struct	DofEntity
	keeps information about DOF on the entity More...
struct	DofEntity_active_change
struct	DofMethod
	Data structure to exchange data between mofem and User Loop Methods on entities. More...
struct	EdgeElementForcesAndSourcesCore
	Edge finite element. More...
struct	EdgeElementForcesAndSourcesCoreOnChildParent
	Base face element used to integrate on skeleton. More...
struct	EdgePolynomialBase
	Calculate base functions on tetrahedral. More...
struct	Ent_Ent_mi_tag
struct	Ent_FiniteElement_mi_tag
struct	Ent_mi_tag
struct	Ent_Owner_mi_tag
struct	Ent_ParallelStatus
struct	EntDofIdx_mi_tag
struct	EntFiniteElement
	Finite element data for entity. More...
struct	EntitiesFieldData
	data structure for finite element entity More...
struct	EntityCacheDofs
struct	EntityCacheNumeredDofs
struct	EntityMethod
	Data structure to exchange data between mofem and User Loop Methods on entities. More...
struct	EntityStorage
struct	EntPolynomialBaseCtx
	Class used to pass element data to calculate base functions on tet,triangle,edge. More...
struct	EntType_mi_tag
struct	EqBit
struct	EssentialBC
	Essential boundary conditions. More...
struct	EssentialBcStorage
	[Storage and set boundary conditions] More...
struct	EssentialMeshsetType
	Specialisation for b.c. applied by different types of meshsets. More...
struct	EssentialOpType
	Wrapper on user dtat (element) operator used to select specialization of essential bc. More...
struct	EssentialPostProcLhs
	Class (Function) to enforce essential constrains on the left hand side diagonal. More...
struct	EssentialPostProcLhs< DisplacementCubitBcData >
	Specialization for DisplacementCubitBcData. More...
struct	EssentialPostProcRhs
	Class (Function) to enforce essential constrains on the right hand side diagonal. More...
struct	EssentialPostProcRhs< DisplacementCubitBcData >
	Specialization for DisplacementCubitBcData. More...
struct	EssentialPreProc
	Class (Function) to enforce essential constrains. More...
struct	EssentialPreProc< DisplacementCubitBcData >
	Specialization for DisplacementCubitBcData. More...
struct	EssentialPreProc< TemperatureCubitBcData >
	Specialization for TemperatureCubitBcData. More...
struct	EssentialPreProcReaction
	Class (Function) to calculate residual side diagonal. More...
struct	EssentialPreProcReaction< DisplacementCubitBcData >
	Specialization for DisplacementCubitBcData. More...
struct	FaceElementForcesAndSourcesCore
	Face finite element. More...
struct	FaceElementForcesAndSourcesCoreOnChildParent
	Base face element used to integrate on skeleton. More...
struct	FaceElementForcesAndSourcesCoreOnChildParentSwitch
struct	FaceElementForcesAndSourcesCoreOnSide
	Base face element used to integrate on skeleton. More...
struct	FaceElementForcesAndSourcesCoreOnSideSwitch
struct	FatPrismElementForcesAndSourcesCore
	FatPrism finite element. More...
struct	FatPrismPolynomialBase
	Calculate base functions on tetrahedralFIXME: Need moab and mofem finite element structure to work (that not perfect) More...
struct	FatPrismPolynomialBaseCtx
	Class used to pass element data to calculate base functions on fat prism. More...
struct	FE_Unique_mi_tag
struct	FEDofEntity
	keeps information about indexed dofs for the finite element More...
struct	FEEnt_mi_tag
struct	FEMethod
	structure for User Loop Methods on finite elements More...
struct	FENumeredDofEntity
	keeps information about indexed dofs for the finite element More...
struct	Field
	Provide data structure for (tensor) field approximation. More...
struct	FieldBlas
	Basic algebra on fields. More...
struct	FieldEntity
	Struct keeps handle to entity in the field. More...
struct	FieldEntity_change_order
	structure to change FieldEntity order More...
struct	FieldEntityEntFiniteElementAdjacencyMap
	FieldEntityEntFiniteElementAdjacencyMap of mofem finite element and entities. More...
struct	FieldEntityEntFiniteElementAdjacencyMap_change_ByWhat
struct	FieldEvaluatorInterface
	Field evaluator interface. More...
struct	FieldName_mi_tag
	MultiIndex Tag for field name. More...
struct	FieldSeries
	Structure for recording (time) series. More...
struct	FieldSeriesStep
	Structure for keeping time and step. More...
struct	FiniteElement
	Finite element definition. More...
struct	FiniteElement_change_bit_add
	Add field to data. More...
struct	FiniteElement_change_bit_off
	Unset field from data. More...
struct	FiniteElement_change_bit_reset
	Reset field from data. More...
struct	FiniteElement_col_change_bit_add
	Add field to column. More...
struct	FiniteElement_col_change_bit_off
	Unset field from column. More...
struct	FiniteElement_col_change_bit_reset
	Reset field from column. More...
struct	FiniteElement_Meshset_mi_tag
struct	FiniteElement_name_mi_tag
struct	FiniteElement_row_change_bit_add
	Add field to row. More...
struct	FiniteElement_row_change_bit_off
	Unset field from row. More...
struct	FiniteElement_row_change_bit_reset
	Reset field from row. More...
struct	FlatPrismElementForcesAndSourcesCore
	FlatPrism finite element. More...
struct	FlatPrismPolynomialBase
	Calculate base functions on tetrahedralFIXME: Need moab and mofem finite element structure to work (that not perfect) More...
struct	FlatPrismPolynomialBaseCtx
	Class used to pass element data to calculate base functions on flat prism. More...
struct	FluxOpType
	Wrapper to generate natural b.c. specialisation based on operator type. More...
struct	ForceCubitBcData
	Definition of the force bc data structure. More...
struct	ForcesAndSourcesCore
	structure to get information form mofem into EntitiesFieldData More...
struct	FormsIntegrators
	Integrator forms. More...
struct	GenericAttributeData
	Generic attribute data structure. More...
struct	GenericCubitBcData
	Generic bc data structure. More...
struct	GetFTensor0FromVecImpl
struct	GetFTensor1FromArray
struct	GetFTensor1FromArray< 2, S >
struct	GetFTensor1FromArray< 3, S >
struct	GetFTensor1FromArray< 4, S >
struct	GetFTensor1FromArray< 6, S >
struct	GetFTensor1FromArray< 9, S >
struct	GetFTensor1FromMatImpl
struct	GetFTensor1FromMatImpl< 1, S, T, ublas::row_major, A >
struct	GetFTensor1FromMatImpl< 2, S, T, ublas::row_major, A >
struct	GetFTensor1FromMatImpl< 3, S, T, ublas::row_major, A >
struct	GetFTensor1FromMatImpl< 4, S, T, ublas::row_major, A >
struct	GetFTensor1FromMatImpl< 6, S, T, ublas::row_major, A >
struct	GetFTensor1FromMatImpl< 9, S, T, ublas::row_major, A >
struct	GetFTensor1FromPtrImpl
struct	GetFTensor1FromPtrImpl< 2, S >
struct	GetFTensor1FromPtrImpl< 3, S >
struct	GetFTensor2FromArrayImpl
	Get FTensor2 from array. More...
struct	GetFTensor2FromArrayImpl< 2, 2, S, T, L, A >
struct	GetFTensor2FromArrayImpl< 3, 3, S, T, L, A >
struct	GetFTensor2FromArrayRawPtrImpl
struct	GetFTensor2FromArrayRawPtrImpl< 2, 2, T, L, A >
struct	GetFTensor2FromArrayRawPtrImpl< 3, 3, T, L, A >
struct	GetFTensor2SymmetricFromMatImpl
struct	GetFTensor2SymmetricFromMatImpl< 2, S, T, L, A >
struct	GetFTensor2SymmetricFromMatImpl< 3, S, T, L, A >
struct	GetFTensor3DgFromMatImpl
struct	GetFTensor3DgFromMatImpl< 1, 1, S, T, ublas::row_major, A >
struct	GetFTensor3DgFromMatImpl< 2, 2, S, T, ublas::row_major, A >
struct	GetFTensor3DgFromMatImpl< 3, 3, S, T, ublas::row_major, A >
struct	GetFTensor3FromMatImpl
struct	GetFTensor3FromMatImpl< 1, 1, 1, S, T, ublas::row_major, A >
struct	GetFTensor3FromMatImpl< 2, 2, 2, S, T, ublas::row_major, A >
struct	GetFTensor3FromMatImpl< 2, 2, 3, S, T, ublas::row_major, A >
struct	GetFTensor3FromMatImpl< 3, 2, 2, S, T, ublas::row_major, A >
struct	GetFTensor3FromMatImpl< 3, 3, 3, S, T, ublas::row_major, A >
struct	GetFTensor3FromMatImpl< 3, 3, 6, S, T, ublas::row_major, A >
struct	GetFTensor3FromMatImpl< 6, 3, 3, S, T, ublas::row_major, A >
struct	GetFTensor4DdgFromMatImpl
struct	GetFTensor4DdgFromMatImpl< 1, 1, S, T, ublas::row_major, A >
struct	GetFTensor4DdgFromMatImpl< 2, 2, S, T, ublas::row_major, A >
struct	GetFTensor4DdgFromMatImpl< 3, 3, S, T, ublas::row_major, A >
struct	GetFTensor4FromMatImpl
struct	GetFTensor4FromMatImpl< 1, 1, 1, 1, S, T, ublas::row_major, A >
struct	GetFTensor4FromMatImpl< 2, 2, 2, 2, S, T, ublas::row_major, A >
struct	GetFTensor4FromMatImpl< 3, 3, 3, 3, S, T, ublas::row_major, A >
struct	HashBit
struct	HeatFluxCubitBcData
	Definition of the heat flux bc data structure. More...
struct	HexPolynomialBase
	Calculate base functions on tetrahedral. More...
struct	Idx_mi_tag
struct	IdxDataType
struct	IdxDataTypePtr
struct	IntegratedJacobiPolynomial
struct	IntegratedJacobiPolynomialCtx
struct	interface_DofEntity
	Interface to DofEntity. More...
struct	interface_EntFiniteElement
	interface to EntFiniteElement More...
struct	interface_Field
struct	interface_Field< T, T >
struct	interface_FieldEntity
	Interface to FieldEntity. More...
struct	interface_FieldImpl
	Pointer interface for MoFEM::Field. More...
struct	interface_FieldSeries
struct	interface_FiniteElement
struct	interface_FiniteElement< T, T >
struct	interface_FiniteElementImpl
	Inetface for FE. More...
struct	interface_RefElement
	intrface to RefElement More...
struct	interface_RefEntity
	interface to RefEntity More...
struct	ISManager
	Section manager is used to create indexes and sections. More...
struct	JacobiPolynomial
	Calculating Legendre base functions. More...
struct	JacobiPolynomialCtx
	Class used to give arguments to Legendre base functions. More...
struct	KernelLobattoPolynomial
	Calculating Lobatto base functions. More...
struct	KernelLobattoPolynomialCtx
	Class used to give arguments to Kernel Lobatto base functions. More...
struct	KeyFromKey
struct	KspCtx
	Interface for linear (KSP) solver. More...
struct	KspMethod
	data structure for ksp (linear solver) context More...
struct	LegendrePolynomial
	Calculating Legendre base functions. More...
struct	LegendrePolynomialCtx
	Class used to give arguments to Legendre base functions. More...
struct	LobattoPolynomial
	Calculating Lobatto base functions. More...
struct	LobattoPolynomialCtx
	Class used to give arguments to Lobatto base functions. More...
struct	LogManager
	Log manager is used to build and partition problems. More...
struct	LtBit
struct	Mat_Elastic
	Elastic material data structure. More...
struct	Mat_Elastic_EberleinHolzapfel1
	Mat_Elastic with Fibres. More...
struct	Mat_Elastic_TransIso
	Transverse Isotropic material data structure. More...
struct	Mat_Interf
	Linear interface data structure. More...
struct	Mat_Moisture
	moisture transport material data structure More...
struct	Mat_Thermal
	Thermal material data structure. More...
struct	MatrixManager
	Matrix manager is used to build and partition problems. More...
struct	MedInterface
	Interface for load MED files. More...
struct	MeshRefinement
	Mesh refinement interface. More...
struct	Meshset_mi_tag
struct	MeshsetsManager
	Interface for managing meshsets containing materials and boundary conditions. More...
struct	Modify_change_nothing
	Do nothing, used to rebuild database. More...
struct	NaturalBC
	Natural boundary conditions. More...
struct	NaturalForceMeshsets
	Type generating specialisation for force meshsets. More...
struct	NaturalForceMeshsetsScalarAndVectorScaling
	Type generating specialisation for force meshsets. More...
struct	NaturalMeshsetType
	Type generating natural b.c. specialisations for meshsets. More...
struct	NaturalMeshsetTypeVectorScaling
struct	NaturalTemperatureMeshsets
	Type generating specialisation for temperature meshsets. More...
struct	NodeMergerInterface
	Merge node by collapsing edge between them. More...
struct	NumeredDofEntity
	keeps information about indexed dofs for the problem More...
struct	NumeredDofEntity_local_idx_change
struct	NumeredDofEntity_mofem_index_change
struct	NumeredDofEntity_part_and_all_indices_change
struct	NumeredDofEntity_part_and_glob_idx_change
struct	NumeredDofEntity_part_and_indices_change
struct	NumeredDofEntity_part_and_mofem_glob_idx_change
struct	NumeredEntFiniteElement
	Partitioned (Indexed) Finite Element in Problem. More...
struct	NumeredEntFiniteElement_change_part
	Change finite element part. More...
struct	OpAddParentEntData
	Operator to project base functions from parent entity to child. More...
struct	OpBaseDerivativesBase
struct	OpBaseDerivativesMass
struct	OpBaseDerivativesMass< 1 >
struct	OpBaseDerivativesMass< 3 >
struct	OpBaseDerivativesNext
struct	OpBaseDerivativesNext< 1 >
	Specialisation for calculate directives for scalar base functions. More...
struct	OpBaseDerivativesNext< 3 >
	Specialisation for calculate directives for scalar base functions. More...
struct	OpBaseDerivativesSetHOInvJacobian
struct	OpBaseDerivativesSetHOInvJacobian< 2 >
struct	OpBaseImpl
struct	OpBaseImpl< USER_ASSEMBLE, EleOp >
struct	OpBaseTimesScalarImpl
struct	OpBaseTimesScalarImpl< 1, S, GAUSS, OpBase >
struct	OpBaseTimesVectorImpl
struct	OpBaseTimesVectorImpl< 1, FIELD_DIM, S, GAUSS, OpBase >
struct	OpBaseTimesVectorImpl< 3, FIELD_DIM, S, GAUSS, OpBase >
struct	OpCalcNormL2Tensor0
	Get norm of input VectorDouble for Tensor0. More...
struct	OpCalcNormL2Tensor1
	Get norm of input MatrixDouble for Tensor1. More...
struct	OpCalcNormL2Tensor2
	Get norm of input MatrixDouble for Tensor2. More...
struct	OpCalculateDivergenceVectorFieldValues
	Calculate field values (template specialization) for tensor field rank 1, i.e. vector field. More...
struct	OpCalculateHcurlVectorCurl
	Calculate curl of vector field. More...
struct	OpCalculateHcurlVectorCurl< 1, 2 >
	Calculate curl of vector field. More...
struct	OpCalculateHcurlVectorCurl< 3, 3 >
	Calculate curl of vector field. More...
struct	OpCalculateHdivVectorDivergence
	Calculate divergence of vector field. More...
struct	OpCalculateHdivVectorDivergenceDot
	Calculate divergence of vector field dot. More...
struct	OpCalculateHOCoords
	Calculate HO coordinates at gauss points. More...
struct	OpCalculateHOJac
struct	OpCalculateHOJac< 2 >
struct	OpCalculateHOJac< 3 >
struct	OpCalculateHOJacForFaceImpl
	Calculate jacobian for face element. More...
struct	OpCalculateHOJacForFaceImpl< 2 >
struct	OpCalculateHOJacForFaceImpl< 3 >
struct	OpCalculateHOJacForVolume
	Calculate jacobian on Hex or other volume which is not simplex. More...
struct	OpCalculateHTensorTensorField
	Calculate tenor field using tensor base, i.e. Hdiv/Hcurl. More...
struct	OpCalculateHVecTensorDivergence
	Calculate divergence of tonsorial field using vectorial base. More...
struct	OpCalculateHVecTensorField
	Calculate tenor field using vectorial base, i.e. Hdiv/Hcurl. More...
struct	OpCalculateHVecTensorTrace
	Calculate trace of vector (Hdiv/Hcurl) space. More...
struct	OpCalculateHVecVectorField
	Get vector field for H-div approximation. More...
struct	OpCalculateHVecVectorField_General
	Get vector field for H-div approximation. More...
struct	OpCalculateHVecVectorField_General< 3, Field_Dim, double, ublas::row_major, DoubleAllocator >
	Get vector field for H-div approximation. More...
struct	OpCalculateHVecVectorFieldDot
	Get vector field for H-div approximation. More...
struct	OpCalculateHVecVectorFieldDot< 3, Field_Dim >
struct	OpCalculateHVecVectorGradient
	Calculate gradient of vector field. More...
struct	OpCalculateHVecVectorHessian
	Calculate gradient of vector field. More...
struct	OpCalculateInvJacForFatPrism
	Calculate inverse of jacobian for face element. More...
struct	OpCalculateInvJacForFlatPrism
	Calculate inverse of jacobian for face element. More...
struct	OpCalculateScalarFieldGradient
	Get field gradients at integration pts for scalar filed rank 0, i.e. vector field. More...
struct	OpCalculateScalarFieldGradient_General
	Evaluate field gradient values for scalar field, i.e. gradient is tensor rank 1 (vector) More...
struct	OpCalculateScalarFieldGradient_General< Tensor_Dim, double, ublas::row_major, DoubleAllocator >
	Evaluate field gradient values for scalar field, i.e. gradient is tensor rank 1 (vector), specialization. More...
struct	OpCalculateScalarFieldHessian
	Evaluate field gradient values for scalar field, i.e. gradient is tensor rank 1 (vector), specialization. More...
struct	OpCalculateScalarFieldValues
	Get value at integration points for scalar field. More...
struct	OpCalculateScalarFieldValues_General
	Scalar field values at integration points. More...
struct	OpCalculateScalarFieldValuesFromPetscVecImpl
	Get rate of scalar field at integration points. More...
struct	OpCalculateTensor2FieldValues
	Get values at integration pts for tensor filed rank 2, i.e. matrix field. More...
struct	OpCalculateTensor2FieldValues_General
	Calculate field values for tenor field rank 2. More...
struct	OpCalculateTensor2FieldValues_General< Tensor_Dim0, Tensor_Dim1, double, ublas::row_major, DoubleAllocator >
struct	OpCalculateTensor2FieldValuesDot
	Get time direvarive values at integration pts for tensor filed rank 2, i.e. matrix field. More...
struct	OpCalculateTensor2SymmetricFieldGradient
	Get field gradients at integration pts for symmetric tensorial field rank 2. More...
struct	OpCalculateTensor2SymmetricFieldGradient_General
	Evaluate field gradient values for symmetric 2nd order tensor field, i.e. gradient is tensor rank 3. More...
struct	OpCalculateTensor2SymmetricFieldGradient_General< Tensor_Dim0, Tensor_Dim1, double, ublas::row_major, DoubleAllocator >
struct	OpCalculateTensor2SymmetricFieldValues
	Calculate symmetric tensor field values at integration pts. More...
struct	OpCalculateTensor2SymmetricFieldValuesDot
	Calculate symmetric tensor field rates ant integratio pts. More...
struct	OpCalculateVectorFieldGradient
	Get field gradients at integration pts for scalar filed rank 0, i.e. vector field. More...
struct	OpCalculateVectorFieldGradient_General
	Evaluate field gradient values for vector field, i.e. gradient is tensor rank 2. More...
struct	OpCalculateVectorFieldGradient_General< Tensor_Dim0, Tensor_Dim1, double, ublas::row_major, DoubleAllocator >
struct	OpCalculateVectorFieldGradientDot
	Get field gradients time derivative at integration pts for scalar filed rank 0, i.e. vector field. More...
struct	OpCalculateVectorFieldHessian
struct	OpCalculateVectorFieldValues
	Get values at integration pts for tensor filed rank 1, i.e. vector field. More...
struct	OpCalculateVectorFieldValues_General
	Calculate field values for tenor field rank 1, i.e. vector field. More...
struct	OpCalculateVectorFieldValues_General< Tensor_Dim, double, ublas::row_major, DoubleAllocator >
	Calculate field values (template specialization) for tensor field rank 1, i.e. vector field. More...
struct	OpCalculateVectorFieldValuesFromPetscVecImpl
	Approximate field values for given petsc vector. More...
struct	OpConvectiveTermLhsDuImpl
struct	OpConvectiveTermLhsDuImpl< 1, 1, SPACE_DIM, GAUSS, OpBase >
struct	OpConvectiveTermLhsDuImpl< 1, FIELD_DIM, SPACE_DIM, GAUSS, OpBase >
struct	OpConvectiveTermLhsDyImpl
struct	OpConvectiveTermLhsDyImpl< 1, 1, SPACE_DIM, GAUSS, OpBase >
struct	OpConvectiveTermLhsDyImpl< 1, FIELD_DIM, SPACE_DIM, GAUSS, OpBase >
struct	OpConvectiveTermRhsImpl
struct	OpConvectiveTermRhsImpl< 1, 1, SPACE_DIM, GAUSS, OpBase >
struct	OpConvectiveTermRhsImpl< 1, FIELD_DIM, SPACE_DIM, GAUSS, OpBase >
struct	OpDGProjectionCoefficients
struct	OpDGProjectionEvaluation
struct	OpDGProjectionMassMatrix
struct	OperatorsTester
	Calculate directional derivative of the right hand side and compare it with tangent matrix derivative. More...
struct	OpEssentialLhsImpl
	Enforce essential constrains on lhs. More...
struct	OpEssentialLhsImpl< DisplacementCubitBcData, BASE_DIM, FIELD_DIM, A, I, OpBase >
struct	OpEssentialLhsImpl< HeatFluxCubitBcData, BASE_DIM, FIELD_DIM, A, I, OpBase >
struct	OpEssentialLhsImpl< TemperatureCubitBcData, 1, 1, A, I, OpBase >
struct	OpEssentialRhsImpl
	Enforce essential constrains on rhs. More...
struct	OpEssentialRhsImpl< DisplacementCubitBcData, 1, FIELD_DIM, A, I, OpBase >
struct	OpEssentialRhsImpl< HeatFluxCubitBcData, 3, FIELD_DIM, A, I, OpBase >
struct	OpEssentialRhsImpl< TemperatureCubitBcData, 1, 1, A, I, OpBase >
struct	OpFluxLhsImpl
struct	OpFluxRhsImpl
struct	OpFluxRhsImpl< NaturalMeshsetType< BLOCKSET >, 1, 1, A, I, OpBase >
struct	OpFluxRhsImpl< NaturalMeshsetType< BLOCKSET >, 1, FIELD_DIM, A, I, OpBase >
struct	OpFluxRhsImpl< NaturalMeshsetType< BLOCKSET >, 3, FIELD_DIM, A, I, OpBase >
struct	OpFluxRhsImpl< NaturalMeshsetType< FORCESET >, 1, FIELD_DIM, A, I, OpBase >
struct	OpFluxRhsImpl< NaturalMeshsetType< HEATFLUXSET >, 1, 1, A, I, OpBase >
struct	OpFluxRhsImpl< NaturalMeshsetType< PRESSURESET >, 1, FIELD_DIM, A, I, OpBase >
struct	OpFluxRhsImpl< NaturalMeshsetType< TEMPERATURESET >, 3, FIELD_DIM, A, I, OpBase >
struct	OpFluxRhsImpl< NaturalMeshsetType< UNKNOWNSET >, 1, 1, A, I, OpBase >
struct	OpFluxRhsImpl< NaturalMeshsetType< UNKNOWNSET >, 1, FIELD_DIM, A, I, OpBase >
	Base class for OpFluxRhsImpl<NaturalMeshsetType<T>, 1, FIELD_DIM, A, I, OpBase> More...
struct	OpFluxRhsImpl< NaturalMeshsetType< UNKNOWNSET >, 3, FIELD_DIM, A, I, OpBase >
struct	OpFluxRhsImpl< NaturalMeshsetTypeVectorScaling< BLOCKSET >, 1, FIELD_DIM, A, I, OpBase >
struct	OpFluxRhsImpl< NaturalMeshsetTypeVectorScaling< UNKNOWNSET >, 1, FIELD_DIM, A, I, OpBase >
struct	OpGetCoordsAndNormalsOnPrism
	calculate normals at Gauss points of triangle element More...
struct	OpGetDataAndGradient
	Get field values and gradients at Gauss points. More...
struct	OpGetHONormalsOnFace
	Calculate normals at Gauss points of triangle element. More...
struct	OpGetHOTangentOnEdge
	Calculate tangent vector on edge form HO geometry approximation. More...
struct	OpGetHOTangentsOnEdge
	Calculate tangent vector on edge form HO geometry approximation. More...
struct	OpGradGradImpl
struct	OpGradGradImpl< 1, 1, SPACE_DIM, GAUSS, OpBase >
struct	OpGradGradImpl< 1, FIELD_DIM, SPACE_DIM, GAUSS, OpBase >
struct	OpGradGradSymTensorGradGradImpl
struct	OpGradGradSymTensorGradGradImpl< 1, 1, SPACE_DIM, S, GAUSS, OpBase >
struct	OpGradSymTensorGradImpl
struct	OpGradSymTensorGradImpl< 1, SPACE_DIM, SPACE_DIM, S, GAUSS, OpBase >
struct	OpGradTensorGradImpl
struct	OpGradTensorGradImpl< 1, SPACE_DIM, SPACE_DIM, S, GAUSS, OpBase >
struct	OpGradTimesSymTensorImpl
struct	OpGradTimesSymTensorImpl< 1, SPACE_DIM, SPACE_DIM, S, GAUSS, OpBase >
struct	OpGradTimesTensorImpl
struct	OpGradTimesTensorImpl< 1, 1, SPACE_DIM, S, GAUSS, OpBase >
struct	OpGradTimesTensorImpl< 1, SPACE_DIM, SPACE_DIM, S, GAUSS, OpBase >
struct	OpHOSetContravariantPiolaTransformOnEdge3D
	transform Hcurl base fluxes from reference element to physical edge More...
struct	OpHOSetContravariantPiolaTransformOnFace3D
	transform Hdiv base fluxes from reference element to physical triangle More...
struct	OpHOSetCovariantPiolaTransformOnFace3D
	transform Hcurl base fluxes from reference element to physical triangle More...
struct	OpInvertMatrix
struct	OpLoopSide
	Element used to execute operators on side of the element. More...
struct	OpLoopThis
	Execute "this" element in the operator. More...
struct	OpMakeHdivFromHcurl
	Make Hdiv space from Hcurl space in 2d. More...
struct	OpMassImpl
struct	OpMassImpl< 1, 1, GAUSS, OpBase >
struct	OpMassImpl< 1, FIELD_DIM, GAUSS, OpBase >
struct	OpMassImpl< 3, 4, GAUSS, OpBase >
struct	OpMassImpl< 3, 9, GAUSS, OpBase >
struct	OpMassImpl< 3, FIELD_DIM, GAUSS, OpBase >
struct	OpMixDivTimesScalarImpl
struct	OpMixDivTimesScalarImpl< SPACE_DIM, GAUSS, OpBase >
struct	OpMixDivTimesUImpl
struct	OpMixDivTimesUImpl< 1, FIELD_DIM, FIELD_DIM, GAUSS, OpBase, CoordSys >
struct	OpMixDivTimesUImpl< 3, 1, SPACE_DIM, GAUSS, OpBase, CoordSys >
struct	OpMixDivTimesUImpl< 3, FIELD_DIM, SPACE_DIM, GAUSS, OpBase, CoordSys >
struct	OpMixDivTimesVecImpl
struct	OpMixDivTimesVecImpl< SPACE_DIM, GAUSS, OpBase, CoordSys >
struct	OpMixScalarTimesDivImpl
struct	OpMixScalarTimesDivImpl< SPACE_DIM, GAUSS, OpBase, COORDINATE_SYSTEM >
struct	OpMixTensorTimesGradImpl
struct	OpMixTensorTimesGradImpl< SPACE_DIM, GAUSS, OpBase >
struct	OpMixTensorTimesGradUImpl
struct	OpMixTensorTimesGradUImpl< SPACE_DIM, GAUSS, OpBase >
struct	OpMixVecTimesDivLambdaImpl
struct	OpMixVecTimesDivLambdaImpl< SPACE_DIM, GAUSS, OpBase >
struct	OpMixVectorTimesGradImpl
struct	OpMixVectorTimesGradImpl< 1, SPACE_DIM, SPACE_DIM, GAUSS, OpBase >
struct	OpMixVectorTimesGradImpl< 3, SPACE_DIM, SPACE_DIM, GAUSS, OpBase >
struct	OpMultiplyDeterminantOfJacobianAndWeightsForFatPrisms
	Operator for fat prism element updating integration weights in the volume. More...
struct	OpNormalMixVecTimesScalarImpl
	Multiply vector times normal on the face times scalar function. More...
struct	OpNormalMixVecTimesScalarImpl< 2, GAUSS, OpBase >
struct	OpNormalMixVecTimesScalarImpl< 3, GAUSS, OpBase >
struct	OpNormalMixVecTimesVectorFieldImpl
	Multiply vector times normal on the face times vector field. More...
struct	OpNormalMixVecTimesVectorFieldImpl< SPACE_DIM, GAUSS, OpBase >
struct	OpPostProcMapInMoab
	Post post-proc data at points from hash maps. More...
struct	OpRunParent
	Operator to execute finite element instance on parent element. This operator is typically used to project field from parent to child, or vice versa. It enables to evaluate filed data of parent entity on chile entity integration points. More...
struct	OpScaleBaseBySpaceInverseOfMeasure
	Scale base functions by inverses of measure of element. More...
struct	OpScaleMatrix
struct	OpSchurAssembleBegin
	Clear Schur complement internal data. More...
struct	OpSchurAssembleEnd
	Assemble Schur complement. More...
struct	OpSchurAssembleEnd< SCHUR_DGESV >
struct	OpSchurAssembleEnd< SCHUR_DSYSV >
struct	OpSchurAssembleEndImpl
	Assemble Schur complement (Implementation) More...
struct	OpSetBc
	Set indices on entities on finite element. More...
struct	OpSetContravariantPiolaTransform
	apply contravariant (Piola) transfer to Hdiv space More...
struct	OpSetContravariantPiolaTransformOnEdge2D
struct	OpSetContravariantPiolaTransformOnFace
	transform Hdiv base fluxes from reference element to physical triangle More...
struct	OpSetContravariantPiolaTransformOnFace2DImpl
	Apply contravariant (Piola) transfer to Hdiv space on face. More...
struct	OpSetContravariantPiolaTransformOnFace2DImpl< 2 >
struct	OpSetContravariantPiolaTransformOnFace2DImpl< 3 >
struct	OpSetCovariantPiolaTransform
	apply covariant transfer to Hcurl space More...
struct	OpSetCovariantPiolaTransformOnEdge
	transform Hcurl base fluxes from reference element to physical edge More...
struct	OpSetCovariantPiolaTransformOnFace
	transform Hcurl base fluxes from reference element to physical triangle More...
struct	OpSetCovariantPiolaTransformOnFace2DImpl
	Transform Hcurl base fluxes from reference element to physical triangle. More...
struct	OpSetCovariantPiolaTransformOnFace2DImpl< 2 >
	Apply contravariant (Piola) transfer to Hdiv space on face. More...
struct	OpSetHOContravariantPiolaTransform
	Apply contravariant (Piola) transfer to Hdiv space for HO geometry. More...
struct	OpSetHOCovariantPiolaTransform
	Apply covariant (Piola) transfer to Hcurl space for HO geometry. More...
struct	OpSetHOInvJacToScalarBases
	Set inverse jacobian to base functions. More...
struct	OpSetHOInvJacToScalarBases< 2 >
struct	OpSetHOInvJacToScalarBasesImpl
struct	OpSetHOInvJacVectorBase
	transform local reference derivatives of shape function to global derivatives if higher order geometry is given More...
struct	OpSetHOWeights
	Set inverse jacobian to base functions. More...
struct	OpSetHOWeightsOnEdge
	Modify integration weights on face to take in account higher-order geometry. More...
struct	OpSetHOWeightsOnFace
	Modify integration weights on face to take in account higher-order geometry. More...
struct	OpSetHOWeightsOnSubDim
struct	OpSetHOWeightsOnSubDim< 2 >
struct	OpSetHOWeightsOnSubDim< 3 >
struct	OpSetInvJacH1
	Transform local reference derivatives of shape function to global derivatives. More...
struct	OpSetInvJacH1ForFace
struct	OpSetInvJacH1ForFaceEmbeddedIn3DSpace
struct	OpSetInvJacH1ForFatPrism
	Transform local reference derivatives of shape functions to global derivatives. More...
struct	OpSetInvJacH1ForFlatPrism
	Transform local reference derivatives of shape functions to global derivatives. More...
struct	OpSetInvJacHcurlFaceImpl
	Transform local reference derivatives of shape function to global derivatives for face. More...
struct	OpSetInvJacHcurlFaceImpl< 2 >
struct	OpSetInvJacHcurlFaceImpl< 3 >
struct	OpSetInvJacHdivAndHcurl
	brief Transform local reference derivatives of shape function to global derivatives More...
struct	OpSetInvJacL2ForFace
struct	OpSetInvJacL2ForFaceEmbeddedIn3DSpace
struct	OpSetInvJacSpaceForFaceImpl
	Transform local reference derivatives of shape functions to global derivatives. More...
struct	OpSetInvJacSpaceForFaceImpl< 2, 1 >
struct	OpSetInvJacSpaceForFaceImpl< 2, 2 >
struct	OpSetInvJacSpaceForFaceImpl< 3, 1 >
struct	OpSetInvJacToScalarBasesBasic
struct	OpSourceImpl
struct	OpSourceImpl< 1, 1, GAUSS, SourceFunctionSpecialization::S< OpBase > >
	Integrate source. More...
struct	OpSourceImpl< 1, FIELD_DIM, GAUSS, SourceFunctionSpecialization::S< OpBase > >
struct	OpSourceImpl< 3, FIELD_DIM, GAUSS, SourceFunctionSpecialization::S< OpBase > >
struct	OpSourceImpl< 3, FIELD_DIM, I, SourceBoundaryNormalSpecialization::S< OpBase > >
	This is specialisation for sources on boundary which depends on normal. More...
struct	OpSymmetrizeTensor
struct	OpTensorTimesSymmetricTensor
	Calculate \( \pmb\sigma_{ij} = \mathbf{D}_{ijkl} \pmb\varepsilon_{kl} \). More...
struct	OpUnSetBc
struct	Order_mi_tag
	MultiIndex Tag for field order. More...
struct	PairNameFEMethodPtr
struct	ParentFiniteElementAdjacencyFunction
	Create adjacency to parent elements. More...
struct	ParentFiniteElementAdjacencyFunctionSkeleton
	Create adjacency to parent skeleton elements. More...
struct	Part_mi_tag
struct	PetscData
struct	PetscGlobalIdx_mi_tag
struct	PetscLocalIdx_mi_tag
struct	PipelineManager
	PipelineManager interface. More...
struct	PostProcBrokenMeshInMoab
struct	PostProcBrokenMeshInMoab< EdgeElementForcesAndSourcesCore >
struct	PostProcBrokenMeshInMoab< FaceElementForcesAndSourcesCore >
struct	PostProcBrokenMeshInMoab< VolumeElementForcesAndSourcesCore >
struct	PostProcBrokenMeshInMoabBase
struct	PostProcBrokenMeshInMoabBaseBeginImpl
struct	PostProcBrokenMeshInMoabBaseContImpl
struct	PostProcBrokenMeshInMoabBaseEndImpl
struct	PostProcGenerateRefMesh
	Element for postprocessing. Uses MoAB to generate post-processing mesh. More...
struct	PostProcGenerateRefMesh< MBEDGE >
struct	PostProcGenerateRefMesh< MBHEX >
struct	PostProcGenerateRefMesh< MBQUAD >
struct	PostProcGenerateRefMesh< MBTET >
struct	PostProcGenerateRefMesh< MBTRI >
struct	PostProcGenerateRefMeshBase
struct	PressureCubitBcData
	Definition of the pressure bc data structure. More...
struct	PrismInterface
	Create interface from given surface and insert flat prisms in-between. More...
struct	PrismsFromSurfaceInterface
	merge node from two bit levels More...
struct	Problem
	keeps basic data about problem More...
struct	Problem_mi_tag
struct	ProblemChangeRefLevelBitAdd
	add ref level to problem More...
struct	ProblemChangeRefLevelBitDofMaskAdd
	set prof dof bit ref mask More...
struct	ProblemChangeRefLevelBitDofMaskSet
	set prof dof bit ref mask More...
struct	ProblemChangeRefLevelBitSet
	set ref level to problem More...
struct	ProblemClearComposedProblemData
	Clear composed problem data structure. More...
struct	ProblemClearNumeredFiniteElementsChange
	clear problem finite elements More...
struct	ProblemClearSubProblemData
	Clear sub-problem data structure. More...
struct	ProblemFiniteElementChangeBitAdd
	add finite element to problem More...
struct	ProblemFiniteElementChangeBitUnSet
	remove finite element from problem More...
struct	ProblemsManager
	Problem manager is used to build and partition problems. More...
struct	ProblemZeroNbColsChange
	zero nb. of DOFs in col More...
struct	ProblemZeroNbRowsChange
	zero nb. of DOFs in row More...
struct	Proc_mi_tag
struct	Projection10NodeCoordsOnField
	Projection of edge entities with one mid-node on hierarchical basis. More...
struct	ProjectionFieldOn10NodeTet
struct	QuadPolynomialBase
	Calculate base functions on triangle. More...
struct	RefElement
	keeps data about abstract refined finite element More...
struct	RefElement_EDGE
	keeps data about abstract EDGE finite element More...
struct	RefElement_MESHSET
	keeps data about abstract MESHSET finite element More...
struct	RefElement_PRISM
	keeps data about abstract PRISM finite element More...
struct	RefElement_VERTEX
	keeps data about abstract VERTEX finite element More...
struct	RefElementFace
	keeps data about abstract TRI finite element More...
struct	RefElementVolume
	keeps data about abstract TET finite element More...
struct	RefEntExtractor
	Extract entity handle form multi-index container. More...
struct	RefEntity_change_left_shift
	ref mofem entity, left shift More...
struct	RefEntity_change_parent
	change parent More...
struct	RefEntity_change_right_shift
	ref mofem entity, right shift More...
struct	RefEntityTmp
struct	RefEntityTmp< 0 >
	Struct keeps handle to refined handle. More...
struct	RefEntityTmp<-1 >
struct	ScalingMethod
struct	SCHUR_DGESV
struct	SCHUR_DSYSV
struct	SchurL2Mats
	Schur complement data storage. More...
struct	SeriesID_mi_tag
struct	SeriesName_mi_tag
struct	SeriesRecorder
struct	SetBitRefLevelTool
	tool class with methods used more than twp times More...
struct	SetOtherGlobalGhostVector
struct	SetOtherLocalGhostVector
struct	SideNumber
	keeps information about side number for the finite element More...
struct	SideNumber_mi_tag
struct	Simple
	Simple interface for fast problem set-up. More...
struct	SmartPetscObj
	intrusive_ptr for managing petsc objects More...
struct	SnesCtx
	Interface for nonlinear (SNES) solver. More...
struct	SnesMethod
	data structure for snes (nonlinear solver) context More...
struct	SourceBoundaryNormalSpecialization
struct	SourceFunctionSpecialization
struct	Space_mi_tag
struct	TemperatureCubitBcData
	Definition of the temperature bc data structure. More...
struct	TempMeshset
struct	TetGenInterface
	TetGen interface. More...
struct	TetPolynomialBase
	Calculate base functions on tetrahedral. More...
struct	TimeScale
	Force scale operator for reading two columns. More...
struct	TimeScaleVector
	Force scale operator for reading four columns (time and vector) More...
struct	Tools
	Auxiliary tools. More...
struct	TriPolynomialBase
	Calculate base functions on triangle. More...
struct	TsCtx
	Interface for Time Stepping (TS) solver. More...
struct	TSMethod
	data structure for TS (time stepping) context More...
struct	Unique_Ent_mi_tag
struct	Unique_FiniteElement_mi_tag
struct	Unique_mi_tag
struct	UnknownInterface
	base class for all interface classes More...
struct	VecManager
	Vector manager is used to create vectors \mofem_vectors. More...
struct	VelocityCubitBcData
	Definition of the velocity bc data structure. More...
struct	Version
struct	VertexElementForcesAndSourcesCore
	Vertex finite element. More...
struct	VolumeElementForcesAndSourcesCore
	Volume finite element base. More...
struct	VolumeElementForcesAndSourcesCoreOnContactPrismSide
	Base volume element used to integrate on contact surface (could be extended to other volume elements) mofem_forces_and_sources_volume_element. More...
struct	VolumeElementForcesAndSourcesCoreOnContactPrismSideSwitch
struct	VolumeElementForcesAndSourcesCoreOnSide
	Base volume element used to integrate on skeleton. More...
struct	VolumeElementForcesAndSourcesCoreOnSideSwitch
struct	VolumeElementForcesAndSourcesCoreSwitch
struct	WrapMPIComm
	Wrap MPI comminitactor such that is destroyed when is out of scope. More...

Typedefs
template<typename T >
using	ShardVec = boost::shared_ptr< std::vector< T > >
using	VecOfTimeScalingMethods = std::vector< boost::shared_ptr< ScalingMethod > >
	Vector of time scaling methods. More...
template<int FIELD_DIM>
using	VecOfTimeVectorScalingMethods = std::vector< boost::shared_ptr< TimeScaleVector< FIELD_DIM > > >
	Vector of time vector scaling methods. More...
using	TimeScaleVector3 = TimeScaleVector< 3 >
using	TimeScaleVector2 = TimeScaleVector< 3 >
using	DofsAllocator = ublas::unbounded_array< FEDofEntity *, std::allocator< FEDofEntity * > >
using	VectorDofs = ublas::vector< FEDofEntity *, DofsAllocator >
using	FieldEntAllocator = ublas::unbounded_array< FieldEntity *, std::allocator< FieldEntity * > >
using	VectorFieldEntities = ublas::vector< FieldEntity *, FieldEntAllocator >
using	BaseDerivatives = EntitiesFieldData::EntData::BaseDerivatives
using	ScalarFun = boost::function< double(const double, const double, const double)>
	Scalar function type. More...
using	TimeFun = boost::function< double(double)>
	Lambda function used to scale with time. More...
using	FEFun = boost::function< double(const FEMethod *fe_ptr)>
	Lambda function used to scale with time. More...
using	ConstantFun = boost::function< double()>
	Constant function type. More...
template<int DIM>
using	VectorFun = boost::function< FTensor::Tensor1< double, DIM >(const double, const double, const double)>
	Vector function type. More...
using	OpCalculateHOJacVolume = OpCalculateHOJacForVolume
using	OpCalculateHOJacForFace = OpCalculateHOJacForFaceImpl< 2 >
using	OpCalculateHOJacForFaceEmbeddedIn3DSpace = OpCalculateHOJacForFaceImpl< 3 >
template<CubitBC BC>
using	BcTemperature = BcScalarMeshsetType< BC >
using	Core = CoreTmp< 0 >
using	Sev = MoFEM::LogManager::SeverityLevel
typedef multi_index_container< boost::shared_ptr< RefElement >, indexed_by< ordered_unique< tag< Ent_mi_tag >, const_mem_fun< RefElement::interface_type_RefEntity, EntityHandle, &RefElement::getEnt > >, ordered_non_unique< tag< Ent_Ent_mi_tag >, const_mem_fun< RefElement::interface_type_RefEntity, EntityHandle, &RefElement::getParentEnt > >, ordered_non_unique< tag< Composite_ParentEnt_And_BitsOfRefinedEdges_mi_tag >, composite_key< RefElement, const_mem_fun< RefElement::interface_type_RefEntity, EntityHandle, &RefElement::getParentEnt >, const_mem_fun< RefElement, int, &RefElement::getBitRefEdgesUlong > > > > >	RefElement_multiIndex_parents_view
using	Interface = DeprecatedCoreInterface
typedef CubitMeshSet_multiIndex::index< CubitMeshsetType_mi_tag >::type	CubitMeshsetByType
typedef CubitMeshSet_multiIndex::index< CubitMeshsetMaskedType_mi_tag >::type	CubitMeshsetByMask
typedef CubitMeshSet_multiIndex::index< CubitMeshsets_name >::type	CubitMeshsetByName
typedef CubitMeshSet_multiIndex::index< CubitMeshsetType_mi_tag >::type	CubitMeshsetById
typedef multi_index_container< CubitMeshSets, indexed_by< hashed_unique< tag< Meshset_mi_tag >, member< CubitMeshSets, EntityHandle, &CubitMeshSets::meshset > >, ordered_non_unique< tag< CubitMeshsetType_mi_tag >, const_mem_fun< CubitMeshSets, unsigned long int, &CubitMeshSets::getBcTypeULong > >, ordered_non_unique< tag< CubitMeshsetMaskedType_mi_tag >, const_mem_fun< CubitMeshSets, unsigned long int, &CubitMeshSets::getMaksedBcTypeULong > >, ordered_non_unique< tag< CubitMeshsets_name >, const_mem_fun< CubitMeshSets, std::string, &CubitMeshSets::getName > >, hashed_unique< tag< Composite_Cubit_msId_And_MeshsetType_mi_tag >, composite_key< CubitMeshSets, const_mem_fun< CubitMeshSets, int, &CubitMeshSets::getMeshsetId >, const_mem_fun< CubitMeshSets, unsigned long int, &CubitMeshSets::getMaksedBcTypeULong > > > > >	CubitMeshSet_multiIndex
	Stores data about meshsets (see CubitMeshSets) storing data about boundary conditions, interfaces, sidesets, nodests, blocksets. More...
using	DofEntityByUId = DofEntity_multiIndex::index< Unique_mi_tag >::type
using	DofEntityByEnt = DofEntity_multiIndex::index< Ent_mi_tag >::type
	Dof multi-index by entity. More...
using	DofEntity_multiIndex_uid_view = multi_index_container< boost::shared_ptr< DofEntity >, indexed_by< ordered_unique< const_mem_fun< DofEntity, UId, &DofEntity::getLocalUniqueId > > > >
	multi-index view on DofEntity by uid More...
using	DofEntity_multiIndex_global_uid_view = multi_index_container< boost::shared_ptr< DofEntity >, indexed_by< ordered_unique< const_mem_fun< DofEntity, UId, &DofEntity::getGlobalUniqueId > > > >
	multi-index view on DofEntity by uid More...
typedef std::vector< boost::weak_ptr< DofEntity > >	DofEntity_vector_view
	vector view on DofEntity by uid More...
typedef multi_index_container< boost::shared_ptr< DofEntity >, indexed_by< ordered_unique< const_mem_fun< DofEntity, UId, &DofEntity::getLocalUniqueId > >, ordered_non_unique< const_mem_fun< DofEntity, char, &DofEntity::getActive > > > >	DofEntity_multiIndex_active_view
	multi-index view on DofEntity activity More...
using	FEDofEntityByUId = FEDofEntity_multiIndex::index< Unique_mi_tag >::type
	Dof entity multi-index by UId and entity. More...
using	FENumeredDofEntityByUId = FENumeredDofEntity_multiIndex::index< Unique_mi_tag >::type
	Dof entity multi-index by UId. More...
using	FENumeredDofEntityByEnt = FENumeredDofEntity_multiIndex::index< Ent_mi_tag >::type
	Numbered DoF multi-index by entity. More...
using	NumeredDofEntityByUId = NumeredDofEntity_multiIndex::index< Unique_mi_tag >::type
	Numbered DoF multi-index by UId. More...
using	NumeredDofEntityByLocalIdx = NumeredDofEntity_multiIndex::index< PetscLocalIdx_mi_tag >::type
	Numbered DoF multi-index by local index. More...
using	NumeredDofEntityByEnt = NumeredDofEntity_multiIndex::index< Ent_mi_tag >::type
	Numbered DoF multi-index by entity. More...
using	NumeredDofEntity_multiIndex_uid_view_ordered = multi_index_container< boost::shared_ptr< NumeredDofEntity >, indexed_by< ordered_unique< const_mem_fun< NumeredDofEntity::interface_type_DofEntity, UId, &NumeredDofEntity::getLocalUniqueId > > > >
using	NumeredDofEntity_multiIndex_idx_view_hashed = multi_index_container< boost::shared_ptr< NumeredDofEntity >, indexed_by< hashed_unique< const_mem_fun< NumeredDofEntity, DofIdx, &NumeredDofEntity::getDofIdx > > > >
using	NumeredDofEntity_multiIndex_petsc_local_dof_view_ordered_non_unique = multi_index_container< boost::shared_ptr< NumeredDofEntity >, indexed_by< ordered_non_unique< const_mem_fun< NumeredDofEntity, DofIdx, &NumeredDofEntity::getPetscLocalDofIdx > > > >
using	NumeredDofEntity_multiIndex_coeff_idx_ordered_non_unique = multi_index_container< boost::shared_ptr< NumeredDofEntity >, indexed_by< ordered_non_unique< const_mem_fun< NumeredDofEntity::interface_type_DofEntity, FieldCoefficientsNumber, &NumeredDofEntity::getDofCoeffIdx > > > >
using	ElementAdjacencyFunct = boost::function< MoFEMErrorCode(Interface &moab, const Field &field, const EntFiniteElement &fe, std::vector< EntityHandle > &adjacency)>
	user adjacency function More...
using	CacheTuple = std::tuple< std::vector< EntityCacheDofs >, std::vector< EntityCacheNumeredDofs >, std::vector< EntityCacheNumeredDofs > >
using	CacheTupleWeakPtr = boost::weak_ptr< CacheTuple >
using	CacheTupleSharedPtr = boost::shared_ptr< CacheTuple >
using	FieldEntityByUId = FieldEntity_multiIndex::index< Unique_mi_tag >::type
	Entity index by field name. More...
using	FieldEntity_multiIndex_global_uid_view = multi_index_container< boost::shared_ptr< FieldEntity >, indexed_by< ordered_unique< tag< Unique_mi_tag >, const_mem_fun< FieldEntity, UId, &FieldEntity::getGlobalUniqueId > > > >
	multi-index view on DofEntity by uid More...
using	FieldEntity_multiIndex_ent_view = multi_index_container< boost::shared_ptr< FieldEntity >, indexed_by< sequenced<>, ordered_non_unique< tag< Ent_mi_tag >, const_mem_fun< FieldEntity::interface_type_RefEntity, EntityHandle, &FieldEntity::getEnt > > > >
using	FieldEntity_multiIndex_spaceType_view = multi_index_container< boost::shared_ptr< FieldEntity >, indexed_by< sequenced<>, ordered_non_unique< tag< Composite_EntType_and_Space_mi_tag >, composite_key< FieldEntity, const_mem_fun< FieldEntity::interface_type_RefEntity, EntityType, &FieldEntity::getEntType >, const_mem_fun< FieldEntity::interface_type_Field, FieldSpace, &FieldEntity::getSpace > > > > >
typedef std::vector< boost::weak_ptr< FieldEntity > >	FieldEntity_vector_view
using	FieldEntity_multiIndex = multi_index_container< boost::shared_ptr< FieldEntity >, indexed_by< ordered_unique< tag< Unique_mi_tag >, member< FieldEntity, UId, &FieldEntity::localUId > >, ordered_non_unique< tag< Ent_mi_tag >, const_mem_fun< FieldEntity::interface_type_RefEntity, EntityHandle, &FieldEntity::getEnt > > > >
typedef boost::function< int(const int order)>	FieldOrderFunct
	user adjacency function More...
typedef FieldOrderFunct	FieldOrderTable[MBMAXTYPE]
	user adjacency function table More...
typedef multi_index_container< boost::shared_ptr< Field >, indexed_by< ordered_unique< tag< BitFieldId_mi_tag >, const_mem_fun< Field, const BitFieldId &, &Field::getId >, LtBit< BitFieldId > > > >	Field_multiIndex_view
using	EmptyFieldBlocks = Problem::EmptyFieldBlocks
typedef multi_index_container< boost::shared_ptr< RefElement >, indexed_by< ordered_unique< tag< Ent_mi_tag >, const_mem_fun< RefElement::interface_type_RefEntity, EntityHandle, &RefElement::getEnt > > > >	RefElement_multiIndex
using	RefEntity = RefEntityTmp< 0 >
using	RefEntity_multiIndex = multi_index_container< boost::shared_ptr< RefEntity >, indexed_by< ordered_unique< tag< Ent_mi_tag >, const_mem_fun< RefEntity, EntityHandle, &RefEntity::getEnt > >, ordered_non_unique< tag< Ent_Ent_mi_tag >, const_mem_fun< RefEntity, EntityHandle, &RefEntity::getParentEnt > >, ordered_non_unique< tag< Composite_EntType_and_ParentEntType_mi_tag >, composite_key< RefEntity, const_mem_fun< RefEntity, EntityType, &RefEntity::getEntType >, const_mem_fun< RefEntity, EntityType, &RefEntity::getParentEntType > > >, ordered_non_unique< tag< Composite_ParentEnt_And_EntType_mi_tag >, composite_key< RefEntity, const_mem_fun< RefEntity, EntityType, &RefEntity::getEntType >, const_mem_fun< RefEntity, EntityHandle, &RefEntity::getParentEnt > > > > >
using	RefEntity_multiIndex_view_by_hashed_parent_entity = multi_index_container< boost::shared_ptr< RefEntity >, indexed_by< hashed_non_unique< const_mem_fun< RefEntity, EntityHandle, &RefEntity::getParentEnt > >, hashed_unique< tag< Composite_EntType_and_ParentEntType_mi_tag >, composite_key< boost::shared_ptr< RefEntity >, const_mem_fun< RefEntity, EntityHandle, &RefEntity::getEnt >, const_mem_fun< RefEntity, EntityHandle, &RefEntity::getParentEnt > > > > >
	multi-index view of RefEntity by parent entity More...
using	RefEntity_multiIndex_view_by_ordered_parent_entity = multi_index_container< boost::shared_ptr< RefEntity >, indexed_by< ordered_non_unique< const_mem_fun< RefEntity, EntityHandle, &RefEntity::getParentEnt > >, hashed_unique< tag< Composite_EntType_and_ParentEntType_mi_tag >, composite_key< boost::shared_ptr< RefEntity >, const_mem_fun< RefEntity, EntityHandle, &RefEntity::getEnt >, const_mem_fun< RefEntity, EntityHandle, &RefEntity::getParentEnt > > > > >
using	RefEntity_multiIndex_view_sequence_ordered_view = multi_index_container< boost::shared_ptr< RefEntity >, indexed_by< sequenced<>, ordered_unique< tag< Ent_mi_tag >, const_mem_fun< RefEntity, EntityHandle, &RefEntity::getEnt > > > >
typedef multi_index_container< FieldSeries, indexed_by< ordered_unique< tag< SeriesID_mi_tag >, const_mem_fun< FieldSeries, EntityID, &FieldSeries::get_meshset_id > >, ordered_unique< tag< SeriesName_mi_tag >, const_mem_fun< FieldSeries, boost::string_ref, &FieldSeries::getNameRef > > > >	Series_multiIndex
	Series multi index. More...
typedef multi_index_container< FieldSeriesStep, indexed_by< ordered_unique< tag< Composite_SeriesID_And_Step_mi_tag >, composite_key< FieldSeriesStep, const_mem_fun< FieldSeriesStep::interface_type_FieldSeries, EntityID, &FieldSeriesStep::get_meshset_id >, member< FieldSeriesStep, int, &FieldSeriesStep::step_number > > >, ordered_unique< tag< Composite_SeriesName_And_Step_mi_tag >, composite_key< FieldSeriesStep, const_mem_fun< FieldSeriesStep::interface_type_FieldSeries, boost::string_ref, &FieldSeriesStep::getNameRef >, member< FieldSeriesStep, int, &FieldSeriesStep::step_number > > >, ordered_non_unique< tag< SeriesName_mi_tag >, const_mem_fun< FieldSeriesStep::interface_type_FieldSeries, boost::string_ref, &FieldSeriesStep::getNameRef > >, ordered_non_unique< tag< Composite_SeriesName_And_Time_mi_tag >, composite_key< FieldSeriesStep, const_mem_fun< FieldSeriesStep::interface_type_FieldSeries, boost::string_ref, &FieldSeriesStep::getNameRef >, const_mem_fun< FieldSeriesStep, double, &FieldSeriesStep::get_time > > > > >	SeriesStep_multiIndex
	Step multi index. More...
typedef std::deque< PairNameFEMethodPtr >	FEMethodsSequence
typedef std::deque< BasicMethodPtr >	BasicMethodsSequence
using	PostProcGenerateRefMeshPtr = boost::shared_ptr< PostProcGenerateRefMeshBase >
using	PostProcBrokenMeshInMoabBaseBegin = PostProcBrokenMeshInMoabBaseBeginImpl< PostProcBrokenMeshInMoabBase< ForcesAndSourcesCore > >
	Enable to run stack of post-processing elements. Use this to begin stack. More...
template<typename E >
using	PostProcBrokenMeshInMoabBaseCont = PostProcBrokenMeshInMoabBaseContImpl< PostProcBrokenMeshInMoabBase< E > >
	Enable to run stack of post-processing elements. More...
using	PostProcBrokenMeshInMoabBaseEnd = PostProcBrokenMeshInMoabBaseEndImpl< PostProcBrokenMeshInMoabBase< ForcesAndSourcesCore > >
	Enable to run stack of post-processing elements. Use this to end stack. More...
typedef multi_index_container< BlockMatData, indexed_by< ordered_unique< composite_key< BlockMatData, member< BlockMatData, std::string, &BlockMatData::rowField >, member< BlockMatData, std::string, &BlockMatData::colField >, member< BlockMatData, EntityType, &BlockMatData::rowType >, member< BlockMatData, EntityType, &BlockMatData::colType >, member< BlockMatData, int, &BlockMatData::rowSide >, member< BlockMatData, int, &BlockMatData::colSide > > >, ordered_non_unique< composite_key< BlockMatData, member< BlockMatData, std::string, &BlockMatData::rowField >, member< BlockMatData, std::string, &BlockMatData::colField >, member< BlockMatData, EntityType, &BlockMatData::rowType >, member< BlockMatData, EntityType, &BlockMatData::colType > > >, ordered_non_unique< composite_key< BlockMatData, member< BlockMatData, std::string, &BlockMatData::rowField >, member< BlockMatData, std::string, &BlockMatData::colField > > >, ordered_non_unique< member< BlockMatData, std::string, &BlockMatData::rowField > >, ordered_non_unique< member< BlockMatData, std::string, &BlockMatData::colField > > > >	BlockMatContainer
using	EntData = EntitiesFieldData::EntData
using	DomainEle = VolumeElementForcesAndSourcesCore
using	DomainEleOp = DomainEle::UserDataOperator
using	DomainEleOpAssembly = FormsIntegrators< DomainEleOp >::Assembly< USER_ASSEMBLE >::OpBase
using	SkeletonEle = FaceElementForcesAndSourcesCore
using	SkeletonEleOp = SkeletonEle::UserDataOperator
using	SkeletonEleOpAssembly = FormsIntegrators< SkeletonEleOp >::Assembly< USER_ASSEMBLE >::OpBase
using	BoundaryEle = FaceElementForcesAndSourcesCore
using	BoundaryEleOp = BoundaryEle::UserDataOperator
using	BoundaryEleOpAssembly = FormsIntegrators< BoundaryEleOp >::Assembly< USER_ASSEMBLE >::OpBase
using	DomainSideEle = VolumeElementForcesAndSourcesCoreOnSide
using	DomainSideEleOp = DomainSideEle::UserDataOperator
using	DomainSideEleOpAssembly = FormsIntegrators< DomainSideEleOp >::Assembly< USER_ASSEMBLE >::OpBase
Scalar values
using	OpCalculateScalarFieldValuesDot = OpCalculateScalarFieldValuesFromPetscVecImpl< PetscData::CTX_SET_X_T >
using	OpCalculateScalarFieldValuesDotDot = OpCalculateScalarFieldValuesFromPetscVecImpl< PetscData::CTX_SET_X_TT >
using	OpCalculateScalarValuesDot = OpCalculateScalarFieldValuesDot
Vector field values at integration points
template<int Tensor_Dim>
using	OpCalculateVectorFieldValuesDot = OpCalculateVectorFieldValuesFromPetscVecImpl< Tensor_Dim, PetscData::CTX_SET_X_T >
	Get time derivatives of values at integration pts for tensor filed rank 1, i.e. vector field. More...
template<int Tensor_Dim>
using	OpCalculateVectorFieldValuesDotDot = OpCalculateVectorFieldValuesFromPetscVecImpl< Tensor_Dim, PetscData::CTX_SET_X_TT >
	Get second time derivatives of values at integration pts for tensor filed rank 1, i.e. vector field. More...
Operators for faces
using	OpSetInvJacHcurlFace = OpSetInvJacHcurlFaceImpl< 2 >
using	OpSetInvJacHcurlFaceEmbeddedIn3DSpace = OpSetInvJacHcurlFaceImpl< 3 >
using	OpSetCovariantPiolaTransformOnFace2D = OpSetCovariantPiolaTransformOnFace2DImpl< 2 >
using	OpSetContravariantPiolaTransformOnFace2D = OpSetContravariantPiolaTransformOnFace2DImpl< 2 >
using	OpSetContravariantPiolaTransformOnFace2DEmbeddedIn3DSpace = OpSetContravariantPiolaTransformOnFace2DImpl< 3 >
Operators for edges
using	OpSetContrariantPiolaTransformOnEdge = OpSetContravariantPiolaTransformOnEdge2D

Enumerations
enum	AssemblyType { PETSC , SCHUR , USER_ASSEMBLE , LAST_ASSEMBLE }
	[Storage and set boundary conditions] More...
enum	IntegrationType { GAUSS , USER_INTEGRATION , LAST_INTEGRATION }
	Form integrator integration types. More...

Functions
PetscErrorCode	PetscOptionsGetInt (PetscOptions *, const char pre[], const char name[], PetscInt *ivalue, PetscBool *set)
PetscErrorCode	PetscOptionsGetReal (PetscOptions *, const char pre[], const char name[], PetscReal *dval, PetscBool *set)
PetscErrorCode	PetscOptionsGetScalar (PetscOptions *, const char pre[], const char name[], PetscScalar *dval, PetscBool *set)
PetscErrorCode	PetscOptionsGetString (PetscOptions *, const char pre[], const char name[], char str[], size_t size, PetscBool *set)
PetscErrorCode	PetscOptionsGetBool (PetscOptions *, const char pre[], const char name[], PetscBool *bval, PetscBool *set)
PetscErrorCode	PetscOptionsGetRealArray (PetscOptions *, const char pre[], const char name[], PetscReal dval[], PetscInt *nmax, PetscBool *set)
PetscErrorCode	PetscOptionsGetEList (PetscOptions *, const char pre[], const char name[], const char *const *list, PetscInt next, PetscInt *value, PetscBool *set)
PetscErrorCode	PetscOptionsGetIntArray (PetscOptions options, const char pre[], const char name[], PetscInt dvalue[], PetscInt *nmax, PetscBool *set)
PetscErrorCode	PetscOptionsGetScalarArray (PetscOptions options, const char pre[], const char name[], PetscScalar dvalue[], PetscInt *nmax, PetscBool *set)
template<typename T >
PetscObject	getPetscObject (T obj)
auto	createDM (MPI_Comm comm, const std::string dm_type_name)
	Creates smart DM object. More...
DEPRECATED auto	createSmartDM (MPI_Comm comm, const std::string dm_type_name)
MPI_Comm	getCommFromPetscObject (PetscObject obj)
	Get the Comm From Petsc Object object. More...
auto	createGhostVector (MPI_Comm comm, PetscInt n, PetscInt N, PetscInt nghost, const PetscInt ghosts[])
	Create smart ghost vector. More...
DEPRECATED auto	createSmartGhostVector (MPI_Comm comm, PetscInt n, PetscInt N, PetscInt nghost, const PetscInt ghosts[])
auto	createVectorMPI (MPI_Comm comm, PetscInt n, PetscInt N)
	Create MPI Vector. More...
DEPRECATED auto	createSmartVectorMPI (MPI_Comm comm, PetscInt n, PetscInt N)
SmartPetscObj< Vec >	vectorDuplicate (Vec vec)
	Create duplicate vector of smart vector. More...
DEPRECATED SmartPetscObj< Vec >	smartVectorDuplicate (Vec vec)
SmartPetscObj< Mat >	matDuplicate (Mat mat, MatDuplicateOption op)
DEPRECATED SmartPetscObj< Mat >	smartMatDuplicate (Mat mat, MatDuplicateOption op)
auto	createTS (MPI_Comm comm)
auto	createSNES (MPI_Comm comm)
auto	createKSP (MPI_Comm comm)
auto	createPC (MPI_Comm comm)
auto	createISGeneral (MPI_Comm comm, PetscInt n, const PetscInt idx[], PetscCopyMode mode)
	Creates a data structure for an index set containing a list of integers. More...
auto	createAOMappingIS (IS isapp, IS ispetsc)
	Creates an application mapping using two index sets. More...
auto	createAOMapping (MPI_Comm comm, PetscInt napp, const PetscInt myapp[], const PetscInt mypetsc[])
	Creates an application mapping using two integer arrays. More...
auto	createVecScatter (Vec x, IS ix, Vec y, IS iy)
	Create a Vec Scatter object. More...
template<typename T1 >
auto	getVectorAdaptor (T1 ptr, const size_t n)
	Get Vector adaptor. More...
template<typename T1 >
auto	getMatrixAdaptor (T1 ptr, const size_t n, const size_t m)
	Get Matrix adaptor. More...
template<class X >
std::string	toString (X x)
template<int S = 1, class T , class A >
static auto	getFTensor0FromVec (ublas::vector< T, A > &data)
	Get tensor rank 0 (scalar) form data vector. More...
template<int Tensor_Dim, int S = 1, class T , class L , class A >
FTensor::Tensor1< FTensor::PackPtr< T *, S >, Tensor_Dim >	getFTensor1FromMat (ublas::matrix< T, L, A > &data)
	Get tensor rank 1 (vector) form data matrix. More...
template<int Tensor_Dim, int S = 1>
auto	getFTensor1FromMat (MatrixDouble &data)
	Get tensor rank 1 (vector) form data matrix (specialization) More...
template<int Tensor_Dim0, int Tensor_Dim1, class T , class L , class A >
FTensor::Tensor2< FTensor::PackPtr< T *, 1 >, Tensor_Dim0, Tensor_Dim1 >	getFTensor2FromMat (ublas::matrix< T, L, A > &data)
	Get tensor rank 2 (matrix) form data matrix. More...
template<>
FTensor::Tensor2< FTensor::PackPtr< double *, 1 >, 4, 4 >	getFTensor2FromMat (MatrixDouble &data)
template<>
FTensor::Tensor2< FTensor::PackPtr< double *, 1 >, 3, 6 >	getFTensor2FromMat (MatrixDouble &data)
template<>
FTensor::Tensor2< FTensor::PackPtr< double *, 1 >, 6, 6 >	getFTensor2FromMat (MatrixDouble &data)
template<>
FTensor::Tensor2< FTensor::PackPtr< double *, 1 >, 9, 9 >	getFTensor2FromMat (MatrixDouble &data)
template<>
FTensor::Tensor2< FTensor::PackPtr< double *, 1 >, 3, 3 >	getFTensor2FromMat (MatrixDouble &data)
template<>
FTensor::Tensor2< FTensor::PackPtr< double *, 1 >, 3, 2 >	getFTensor2FromMat (MatrixDouble &data)
template<>
FTensor::Tensor2< FTensor::PackPtr< double *, 1 >, 6, 3 >	getFTensor2FromMat (MatrixDouble &data)
template<>
FTensor::Tensor2< FTensor::PackPtr< double *, 1 >, 2, 2 >	getFTensor2FromMat (MatrixDouble &data)
template<>
FTensor::Tensor2< FTensor::PackPtr< double *, 1 >, 1, 1 >	getFTensor2FromMat (MatrixDouble &data)
template<int Tensor_Dim0, int Tensor_Dim1>
static FTensor::Tensor2< FTensor::PackPtr< double *, 1 >, Tensor_Dim0, Tensor_Dim1 >	getFTensor2FromMat (MatrixDouble &data)
	Get tensor rank 2 (matrix) form data matrix (specialization) More...
template<int Tensor_Dim, int S, class T , class L , class A >
static auto	getFTensor2SymmetricFromMat (ublas::matrix< T, L, A > &data)
	Get symmetric tensor rank 2 (matrix) form data matrix. More...
template<int Tensor_Dim, int S = 1>
static auto	getFTensor2SymmetricFromMat (MatrixDouble &data)
template<int Tensor_Dim01, int Tensor_Dim23, int S = 1, class T , class L , class A >
static FTensor::Ddg< FTensor::PackPtr< T *, 1 >, Tensor_Dim01, Tensor_Dim23 >	getFTensor4DdgFromMat (ublas::matrix< T, L, A > &data)
	Get symmetric tensor rank 4 on first two and last indices from form data matrix. More...
template<int Tensor_Dim01, int Tensor_Dim23, int S = 1>
static auto	getFTensor4DdgFromMat (MatrixDouble &data)
template<int Tensor_Dim01, int Tensor_Dim2, int S = 1, class T , class L , class A >
static FTensor::Dg< FTensor::PackPtr< T *, 1 >, Tensor_Dim01, Tensor_Dim2 >	getFTensor3DgFromMat (ublas::matrix< T, L, A > &data)
	Get symmetric tensor rank 3 on the first two indices from form data matrix. More...
template<int Tensor_Dim01, int Tensor_Dim2, int S = 1>
static auto	getFTensor3DgFromMat (MatrixDouble &data)
template<int Tensor_Dim0, int Tensor_Dim1, int Tensor_Dim2, int Tensor_Dim3, int S = 1, class T , class L , class A >
static FTensor::Tensor4< FTensor::PackPtr< T *, 1 >, Tensor_Dim0, Tensor_Dim1, Tensor_Dim2, Tensor_Dim3 >	getFTensor4FromMat (ublas::matrix< T, L, A > &data)
	Get tensor rank 4 (non symmetric) form data matrix. More...
template<int Tensor_Dim0, int Tensor_Dim1, int Tensor_Dim2, int Tensor_Dim3, int S = 1>
static auto	getFTensor4FromMat (MatrixDouble &data)
template<int Tensor_Dim0, int Tensor_Dim1, int Tensor_Dim2, int S = 1, class T , class L , class A >
static FTensor::Tensor3< FTensor::PackPtr< T *, 1 >, Tensor_Dim0, Tensor_Dim1, Tensor_Dim2 >	getFTensor3FromMat (ublas::matrix< T, L, A > &data)
	Get tensor rank 3 (non symmetries) form data matrix. More...
template<int Tensor_Dim0, int Tensor_Dim1, int Tensor_Dim2, int S = 1>
static auto	getFTensor3FromMat (MatrixDouble &data)
template<int DIM, int S = DIM>
FTensor::Tensor1< FTensor::PackPtr< double *, S >, DIM >	getFTensor1FromPtr (double *ptr)
	Make Tensor1 from pointer. More...
template<int DIM1, int DIM2>
FTensor::Tensor2< FTensor::PackPtr< double *, DIM1 *DIM2 >, DIM1, DIM2 >	getFTensor2FromPtr (double *ptr)
	Make Tensor2 from pointer. More...
template<>
FTensor::Tensor2< FTensor::PackPtr< double *, 6 >, 3, 2 >	getFTensor2FromPtr< 3, 2 > (double *ptr)
template<>
FTensor::Tensor2< FTensor::PackPtr< double *, 9 >, 3, 3 >	getFTensor2FromPtr< 3, 3 > (double *ptr)
template<>
FTensor::Tensor2< FTensor::PackPtr< double *, 4 >, 2, 2 >	getFTensor2FromPtr< 2, 2 > (double *ptr)
template<int DIM1, int DIM2, int DIM3>
FTensor::Tensor3< FTensor::PackPtr< double *, DIM1 *DIM2 *DIM3 >, DIM1, DIM2, DIM3 >	getFTensor3FromPtr (double *ptr)
template<>
FTensor::Tensor3< FTensor::PackPtr< double *, 12 >, 3, 2, 2 >	getFTensor3FromPtr< 3, 2, 2 > (double *ptr)
template<int DIM>
FTensor::Tensor2_symmetric< FTensor::PackPtr< double *, DIM *DIM >, DIM >	getFTensor2SymmetricLowerFromPtr (double *ptr)
	Make symmetric Tensor2 from pointer, taking lower triangle of matrix. More...
template<>
FTensor::Tensor2_symmetric< FTensor::PackPtr< double *, 9 >, 3 >	getFTensor2SymmetricLowerFromPtr< 3 > (double *ptr)
template<>
FTensor::Tensor2_symmetric< FTensor::PackPtr< double *, 4 >, 2 >	getFTensor2SymmetricLowerFromPtr< 2 > (double *ptr)
template<int DIM, int S>
auto	getFTensor1FromArray (VectorDouble &data)
	Get FTensor1 from array. More...
template<int DIM, int S = 0>
auto	getFTensor1FromArray (VectorDouble3 &data)
	Get FTensor1 from array. More...
template<>
auto	getFTensor1FromArray< 3, 0 > (VectorDouble3 &data)
template<int DIM, int S>
FTensor::Tensor1< FTensor::PackPtr< double *, S >, DIM >	getFTensor1FromMat (MatrixDouble &data, const size_t rr)
template<>
FTensor::Tensor1< FTensor::PackPtr< double *, 1 >, 2 >	getFTensor1FromMat (MatrixDouble &data, const size_t rr)
template<>
FTensor::Tensor1< FTensor::PackPtr< double *, 1 >, 3 >	getFTensor1FromMat (MatrixDouble &data, const size_t rr)
template<>
FTensor::Tensor1< FTensor::PackPtr< double *, 1 >, 4 >	getFTensor1FromMat (MatrixDouble &data, const size_t rr)
template<>
FTensor::Tensor1< FTensor::PackPtr< double *, 1 >, 9 >	getFTensor1FromMat (MatrixDouble &data, const size_t rr)
template<int DIM, int S>
FTensor::Tensor1< FTensor::PackPtr< double *, S >, DIM >	getFTensor1FromArrayDiag (MatrixDouble &data, const size_t rr)
	Get FTensor1 from array. More...
template<>
FTensor::Tensor1< FTensor::PackPtr< double *, 2 >, 2 >	getFTensor1FromArrayDiag (MatrixDouble &data, const size_t rr)
template<>
FTensor::Tensor1< FTensor::PackPtr< double *, 3 >, 3 >	getFTensor1FromArrayDiag (MatrixDouble &data, const size_t rr)
template<int DIM1, int DIM2, int S>
FTensor::Tensor2< FTensor::PackPtr< double *, S >, DIM1, DIM2 >	getFTensor2FromArray (MatrixDouble &data, const size_t rr, const size_t cc=0)
template<int DIM1, int DIM2>
FTensor::Tensor2< double *, DIM1, DIM2 >	getFTensor2FromArray (MatrixDouble &data, const size_t rr, const size_t cc, const int ss)
template<int S, typename T , typename L , typename A >
auto	getFTensor2FromArray2by2 (ublas::matrix< T, L, A > &data, const FTensor::Number< S > &, const size_t rr, const size_t cc=0)
template<int S, typename T , typename L , typename A >
auto	getFTensor2FromArray3by3 (ublas::matrix< T, L, A > &data, const FTensor::Number< S > &, const size_t rr, const size_t cc=0)
template<int DIM1, int DIM2, int S>
auto	getFTensor2FromArray (MatrixADouble &data, const size_t rr)
MoFEMErrorCode	computeMatrixInverse (MatrixDouble &mat)
	compute matrix inverse with lapack dgetri More...
MoFEMErrorCode	solveLinearSystem (MatrixDouble &mat, VectorDouble &f)
	solve linear system with lapack dgesv More...
MoFEMErrorCode	solveLinearSystem (const MatrixDouble &mat, VectorDouble &f)
	Solve linear system of equations using Lapack. More...
MoFEMErrorCode	computeEigenValuesSymmetric (const MatrixDouble &mat, VectorDouble &eig, MatrixDouble &eigen_vec)
	compute eigenvalues of a symmetric matrix using lapack dsyev More...
template<int DIM, typename T1 , typename T2 >
MoFEMErrorCode	computeEigenValuesSymmetric (FTensor::Tensor2< T1, DIM, DIM > &eigen_vec, FTensor::Tensor1< T2, DIM > &eig)
	compute eigenvalues of a symmetric matrix using lapack dsyev More...
template<int DIM, typename T1 , typename T2 , typename T3 >
MoFEMErrorCode	computeEigenValuesSymmetric (const FTensor::Tensor2_symmetric< T1, DIM > &mat, FTensor::Tensor1< T2, DIM > &eig, FTensor::Tensor2< T3, DIM, DIM > &eigen_vec)
	compute eigenvalues of a symmetric tensor using lapack dsyev More...
template<int DIM>
DEPRECATED MoFEMErrorCode	computeEigenValuesSymmetric (FTensor::Tensor2< double, DIM, DIM > &eigen_vec, FTensor::Tensor1< double, DIM > &eig)
template<int DIM>
DEPRECATED MoFEMErrorCode	computeEigenValuesSymmetric (const FTensor::Tensor2_symmetric< double, DIM > &mat, FTensor::Tensor1< double, DIM > &eig, FTensor::Tensor2< double, DIM, DIM > &eigen_vec)
template<int DIM>
DEPRECATED MoFEMErrorCode	computeEigenValuesSymmetric (const FTensor::Tensor2_symmetric< FTensor::PackPtr< double *, 1 >, DIM > &mat, FTensor::Tensor1< double, DIM > &eig, FTensor::Tensor2< double, DIM, DIM > &eigen_vec)
template<typename T >
static auto	determinantTensor3by3 (T &t)
	Calculate the determinant of a 3x3 matrix or a tensor of rank 2. More...
template<int Tensor_Dim, class T , class L , class A >
MoFEMErrorCode	invertTensor3by3 (ublas::matrix< T, L, A > &jac_data, ublas::vector< T, A > &det_data, ublas::matrix< T, L, A > &inv_jac_data)
	Calculate inverse of tensor rank 2 at integration points. More...
template<>
MoFEMErrorCode	invertTensor3by3< 3, double, ublas::row_major, DoubleAllocator > (MatrixDouble &jac_data, VectorDouble &det_data, MatrixDouble &inv_jac_data)
template<class T1 , class T2 >
MoFEMErrorCode	determinantTensor3by3 (T1 &t, T2 &det)
	Calculate determinant 3 by 3. More...
template<class T1 , class T2 >
MoFEMErrorCode	determinantTensor2by2 (T1 &t, T2 &det)
	Calculate determinant 2 by 2. More...
template<class T1 , class T2 , class T3 >
MoFEMErrorCode	invertTensor3by3 (T1 &t, T2 &det, T3 &inv_t)
	Calculate matrix inverse 3 by 3. More...
template<class T1 , class T2 , class T3 >
MoFEMErrorCode	invertTensor2by2 (T1 &t, T2 &det, T3 &inv_t)
	Calculate matrix inverse 2 by 2. More...
template<typename Extractor , typename Iterator >
moab::Range::iterator	insertOrdered (Range &r, Extractor, Iterator begin_iter, Iterator end_iter)
	Insert ordered mofem multi-index into range. More...
template<typename MI , typename MO = Modify_change_nothing>
MoFEMErrorCode	reconstructMultiIndex (const MI &mi, MO &&mo=Modify_change_nothing())
	Template used to reconstruct multi-index. More...
auto	get_temp_meshset_ptr (moab::Interface &moab)
	Create smart pointer to temporary meshset. More...
auto	id_from_handle (const EntityHandle h)
auto	type_from_handle (const EntityHandle h)
	get type from entity handle More...
auto	ent_form_type_and_id (const EntityType type, const EntityID id)
	get entity handle from type and id More...
auto	dimension_from_handle (const EntityHandle h)
	get entity dimension form handle More...
auto	type_name_from_handle (const EntityHandle h)
	get entity type name from handle More...
auto	field_bit_from_bit_number (const int bit_number)
	get field bit id from bit number More...
template<typename I >
auto	rangeInserter (const I f, const I s, boost::function< bool(I it)> tester, boost::function< MoFEMErrorCode(I f, I s)> inserter)
	Insert ranges. More...
template<typename Dest = void, typename... Arg>
constexpr auto	make_array (Arg &&...arg)
	Create Array. More...
void	tet_type_6 (moab::Interface &moab, const EntityHandle *conn, const EntityHandle *edge_new_nodes, EntityHandle *new_tets_conn)
int	tet_type_5 (moab::Interface &moab, const EntityHandle *conn, const EntityHandle *edge_new_nodes, EntityHandle *new_tets_conn)
int	tet_type_4 (const EntityHandle *conn, const int *split_edges, const EntityHandle *edge_new_nodes, EntityHandle *new_tets_conn)
int	tet_type_3 (const EntityHandle *conn, const int *split_edges, const EntityHandle *edge_new_nodes, EntityHandle *new_tets_conn)
int	tet_type_2 (const EntityHandle *conn, const int *split_edges, const EntityHandle *edge_new_nodes, EntityHandle *new_tets_conn)
void	tet_type_1 (const EntityHandle *conn, const int split_edge, const EntityHandle edge_new_node, EntityHandle *new_tets_conn)
MoFEMErrorCode	tri_type_1 (const EntityHandle *conn, const int split_edge, const EntityHandle edge_new_node, EntityHandle *new_tris_conn)
MoFEMErrorCode	tri_type_2 (const EntityHandle *conn, const int *split_edges, const EntityHandle *edge_new_nodes, EntityHandle *new_tris_conn)
MoFEMErrorCode	tri_type_3 (const EntityHandle *conn, const EntityHandle *edge_new_nodes, EntityHandle *new_tris_conn)
MoFEMErrorCode	prism_type_1 (const EntityHandle *conn, const BitRefEdges split_edges, const EntityHandle *edge_new_nodes, EntityHandle *new_prism_conn)
MoFEMErrorCode	prism_type_2 (const EntityHandle *conn, const BitRefEdges split_edges, const EntityHandle *edge_new_nodes, EntityHandle *new_prism_conn)
MoFEMErrorCode	prism_type_3 (const EntityHandle *conn, const BitRefEdges split_edges, const EntityHandle *edge_new_nodes, EntityHandle *new_prism_conn)
MoFEMErrorCode	quad_split_all_edges (const EntityHandle *conn, const EntityHandle *edge_new_nodes, EntityHandle *new_quad_conn)
MoFEMErrorCode	Hcurl_Ainsworth_EdgeBaseFunctions_MBTET (int *sense, int *p, double *N, double *diffN, double *edgeN[], double *diff_edgeN[], int nb_integration_pts, PetscErrorCode(*base_polynomials)(int p, double s, double *diff_s, double *L, double *diffL, const int dim))
	Edge based H-curl base functions on tetrahedral. More...
MoFEMErrorCode	Hcurl_Ainsworth_EdgeBaseFunctions_MBTET_ON_EDGE (int sense, int p, double *N, double *diffN, double *edgeN, double *diff_edgeN, int nb_integration_pts, PetscErrorCode(*base_polynomials)(int p, double s, double *diff_s, double *L, double *diffL, const int dim))
	Edge based H-curl base functions on edge. More...
MoFEMErrorCode	Hcurl_Ainsworth_EdgeBaseFunctions_MBTET_ON_FACE (int *sense, int *p, double *N, double *diffN, double *edgeN[], double *diff_edgeN[], int nb_integration_pts, PetscErrorCode(*base_polynomials)(int p, double s, double *diff_s, double *L, double *diffL, const int dim))
	Edge based H-curl base functions on face. More...
MoFEMErrorCode	Hcurl_Ainsworth_EdgeBasedFaceFunctions_MBTET (int *faces_nodes, int *p, double *N, double *diffN, double *phi_f_e[4][3], double *diff_phi_f_e[4][3], int nb_integration_pts, PetscErrorCode(*base_polynomials)(int p, double s, double *diff_s, double *L, double *diffL, const int dim))
	Face edge base functions of Hcurl space on tetrahedral. More...
MoFEMErrorCode	Hcurl_Ainsworth_EdgeBasedFaceFunctions_MBTET_ON_FACE (int *faces_nodes, int p, double *N, double *diffN, double *phi_f_e[3], double *diff_phi_f_e[3], int nb_integration_pts, PetscErrorCode(*base_polynomials)(int p, double s, double *diff_s, double *L, double *diffL, const int dim))
	Face edge base functions of Hcurl space. More...
MoFEMErrorCode	Hcurl_Ainsworth_BubbleFaceFunctions_MBTET (int *faces_nodes, int *p, double *N, double *diffN, double *phi_f[4], double *diff_phi_f[4], int nb_integration_pts, PetscErrorCode(*base_polynomials)(int p, double s, double *diff_s, double *L, double *diffL, const int dim))
	Face edge base functions of Hcurl space on face on tetrahedral. More...
MoFEMErrorCode	Hcurl_Ainsworth_BubbleFaceFunctions_MBTET_ON_FACE (int *faces_nodes, int p, double *N, double *diffN, double *phi_f, double *diff_phi_f, int nb_integration_pts, PetscErrorCode(*base_polynomials)(int p, double s, double *diff_s, double *L, double *diffL, const int dim))
	Face edge base functions of Hcurl space on face. More...
MoFEMErrorCode	Hcurl_Ainsworth_FaceInteriorFunctions_MBTET (int *faces_nodes, int p, double *N, double *diffN, double *phi_v, double *diff_phi_v, int nb_integration_pts, PetscErrorCode(*base_polynomials)(int p, double s, double *diff_s, double *L, double *diffL, const int dim))
	Face base interior function. More...
MoFEMErrorCode	Hcurl_Ainsworth_VolumeInteriorFunctions_MBTET (int p, double *N, double *diffN, double *phi_v, double *diff_phi_v, int nb_integration_pts, PetscErrorCode(*base_polynomials)(int p, double s, double *diff_s, double *L, double *diffL, const int dim))
	Volume interior function. More...
MoFEMErrorCode	Hcurl_Ainsworth_FaceFunctions_MBTET (int *face_nodes, int *p, double *N, double *diffN, double *phi_f[4], double *diff_phi_f[4], int nb_integration_pts, PetscErrorCode(*base_polynomials)(int p, double s, double *diff_s, double *L, double *diffL, const int dim))
	Face H-curl functions. More...
MoFEMErrorCode	Hcurl_Ainsworth_FaceFunctions_MBTET_ON_FACE (int *faces_nodes, int p, double *N, double *diffN, double *phi_f, double *diff_phi_f, int nb_integration_pts, PetscErrorCode(*base_polynomials)(int p, double s, double *diff_s, double *L, double *diffL, const int dim))
	Face H-curl functions. More...
MoFEMErrorCode	Hcurl_Ainsworth_VolumeFunctions_MBTET (int p, double *N, double *diffN, double *phi_v, double *diff_phi_v, int nb_integration_pts, PetscErrorCode(*base_polynomials)(int p, double s, double *diff_s, double *L, double *diffL, const int dim))
	H-curl volume base functions. More...
MoFEMErrorCode	Hcurl_Demkowicz_EdgeBaseFunctions_MBTET (int *sense, int *p, double *n, double *diff_n, double *phi[], double *diff_phi[], int nb_integration_pts)
	Edge based H-curl base functions on tetrahedral. More...
MoFEMErrorCode	Hcurl_Demkowicz_EdgeBaseFunctions_MBTRI (int *sense, int *p, double *n, double *diff_n, double *phi[], double *diff_phi[], int nb_integration_pts)
	Edge based H-curl base functions on teriangle. More...
MoFEMErrorCode	Hcurl_Demkowicz_EdgeBaseFunctions_MBEDGE (int sense, int p, double *n, double *diff_n, double *phi, double *diff_phi, int nb_integration_pts)
	Edge based H-curl base functions on edge. More...
MoFEMErrorCode	Hcurl_Demkowicz_FaceBaseFunctions_MBTET (int *faces_nodes, int *p, double *n, double *diff_n, double *phi[], double *diff_phi[], int nb_integration_pts)
	Face base interior function. More...
MoFEMErrorCode	Hcurl_Demkowicz_FaceBaseFunctions_MBTRI (int *faces_nodes, int p, double *n, double *diff_n, double *phi, double *diff_phi, int nb_integration_pts)
	Face base interior function. More...
MoFEMErrorCode	Hcurl_Demkowicz_VolumeBaseFunctions_MBTET (int p, double *n, double *diff_n, double *phi, double *diff_phi, int nb_integration_pts)
	Volume base interior function. More...
MoFEMErrorCode	Hdiv_Ainsworth_EdgeFaceShapeFunctions_MBTET (int *faces_nodes, int *p, double *N, double *diffN, double *phi_f_e[4][3], double *diff_phi_f_e[4][3], int gdim, PetscErrorCode(*base_polynomials)(int p, double s, double *diff_s, double *L, double *diffL, const int dim))
	Hdiv base functions, Edge-based face functions by Ainsworth [1]. More...
MoFEMErrorCode	Hdiv_Ainsworth_EdgeFaceShapeFunctions_MBTET_ON_FACE (int *faces_nodes, int p, double *N, double *diffN, double *phi_f_e[3], double *diff_phi_f_e[3], int gdim, int nb, PetscErrorCode(*base_polynomials)(int p, double s, double *diff_s, double *L, double *diffL, const int dim))
	Hdiv base functions, Edge-based face functions by Ainsworth [1]. More...
MoFEMErrorCode	Hdiv_Ainsworth_FaceBubbleShapeFunctions (int *faces_nodes, int *p, double *N, double *diffN, double *phi_f[], double *diff_phi_f[], int gdim, PetscErrorCode(*base_polynomials)(int p, double s, double *diff_s, double *L, double *diffL, const int dim))
	Face bubble functions by Ainsworth [1]. More...
MoFEMErrorCode	Hdiv_Ainsworth_FaceBubbleShapeFunctions_ON_FACE (int *faces_nodes, int p, double *N, double *diffN, double *phi_f, double *diff_phi_f, int gdim, int nb, PetscErrorCode(*base_polynomials)(int p, double s, double *diff_s, double *L, double *diffL, const int dim))
	Face bubble functions by Ainsworth [1]. More...
MoFEMErrorCode	Hdiv_Ainsworth_EdgeBasedVolumeShapeFunctions_MBTET (int p, double *N, double *diffN, double *phi_v_e[6], double *diff_phi_v_e[6], int gdim, PetscErrorCode(*base_polynomials)(int p, double s, double *diff_s, double *L, double *diffL, const int dim))
	Hdiv base function, Edge-based interior (volume) functions by Ainsworth [1]. More...
MoFEMErrorCode	Hdiv_Ainsworth_FaceBasedVolumeShapeFunctions_MBTET (int p, double *N, double *diffN, double *phi_v_f[], double *diff_phi_v_f[], int gdim, PetscErrorCode(*base_polynomials)(int p, double s, double *diff_s, double *L, double *diffL, const int dim))
MoFEMErrorCode	Hdiv_Ainsworth_VolumeBubbleShapeFunctions_MBTET (int p, double *N, double *diffN, double *phi_v, double *diff_phi_v, int gdim, PetscErrorCode(*base_polynomials)(int p, double s, double *diff_s, double *L, double *diffL, const int dim))
	Interior bubble functions by Ainsworth [1]. More...
MoFEMErrorCode	Hdiv_Demkowicz_Face_MBTET_ON_FACE (int *faces_nodes, int p, double *N, double *diffN, double *phi_f, double *diff_phi_f, int gdim, int nb)
MoFEMErrorCode	Hdiv_Demkowicz_Interior_MBTET (int p, double *N, double *diffN, int p_face[], double *phi_f[4], double *diff_phi_f[4], double *phi_v, double *diff_phi_v, int gdim)
MoFEMErrorCode	quad_split_all_edges (const EntityHandle *conn, const BitRefEdges split_edges, const EntityHandle *edge_new_nodes, EntityHandle *new_quad_conn)
template<class TYPE >
static MoFEMErrorCode	get_value (MatrixDouble &pts_x, MatrixDouble &pts_t, TYPE *ctx)
template<typename T = EntityStorage>
MoFEMErrorCode	VecSetValues (Vec V, const EntitiesFieldData::EntData &data, const double *ptr, InsertMode iora)
	Assemble PETSc vector. More...
template<>
MoFEMErrorCode	VecSetValues< EntityStorage > (Vec V, const EntitiesFieldData::EntData &data, const double *ptr, InsertMode iora)
template<typename T = EntityStorage>
MoFEMErrorCode	VecSetValues (Vec V, const EntitiesFieldData::EntData &data, const VectorDouble &vec, InsertMode iora)
	Assemble PETSc vector. More...
template<typename T = EntityStorage>
MoFEMErrorCode	MatSetValues (Mat M, const EntitiesFieldData::EntData &row_data, const EntitiesFieldData::EntData &col_data, const double *ptr, InsertMode iora)
	Assemble PETSc matrix. More...
template<typename T = EntityStorage>
MoFEMErrorCode	MatSetValues (Mat M, const EntitiesFieldData::EntData &row_data, const EntitiesFieldData::EntData &col_data, const MatrixDouble &mat, InsertMode iora)
	Assemble PETSc matrix. More...
template<>
MoFEMErrorCode	MatSetValues< EntityStorage > (Mat M, const EntitiesFieldData::EntData &row_data, const EntitiesFieldData::EntData &col_data, const double *ptr, InsertMode iora)
template<>
MoFEMErrorCode	VecSetValues< EssentialBcStorage > (Vec V, const EntitiesFieldData::EntData &data, const double *ptr, InsertMode iora)
	Set values to vector in operator. More...
template<>
MoFEMErrorCode	MatSetValues< EssentialBcStorage > (Mat M, const EntitiesFieldData::EntData &row_data, const EntitiesFieldData::EntData &col_data, const double *ptr, InsertMode iora)
	Set values to matrix in operator. More...
template<>
MoFEMErrorCode	MatSetValues< AssemblyTypeSelector< PETSC > > (Mat M, const EntitiesFieldData::EntData &row_data, const EntitiesFieldData::EntData &col_data, const double *ptr, InsertMode iora)
template<>
MoFEMErrorCode	VecSetValues< AssemblyTypeSelector< PETSC > > (Vec V, const EntitiesFieldData::EntData &data, const double *ptr, InsertMode iora)
double	scalar_fun_one (const double, const double, const double)
template<typename E >
MoFEMErrorCode	addHOOpsVol (const std::string field, E &e, bool h1, bool hcurl, bool hdiv, bool l2)
template<typename E >
MoFEMErrorCode	addHOOpsFace3D (const std::string field, E &e, bool hcurl, bool hdiv)
template<>
MoFEMErrorCode	invertTensor3by3< 3, double, ublas::row_major, DoubleAllocator > (MatrixDouble &jac_data, VectorDouble &det_data, MatrixDouble &inv_jac_data)
static void	constructor_data (EntitiesFieldData *data, const EntityType type)
static void	constructor_derived_data (DerivedEntitiesFieldData *derived_data, const boost::shared_ptr< EntitiesFieldData > &data_ptr)
std::ostream &	operator<< (std::ostream &os, const EntitiesFieldData::EntData &e)
std::ostream &	operator<< (std::ostream &os, const EntitiesFieldData &e)
static auto	cmp_uid_lo (const boost::weak_ptr< FieldEntity > &a, const UId &b)
static auto	cmp_uid_hi (const UId &b, const boost::weak_ptr< FieldEntity > &a)
template<typename ENTMULTIINDEX >
static int	getMaxOrder (const ENTMULTIINDEX &multi_index)
template<>
MoFEMErrorCode	VecSetValues< EssentialBcStorage > (Vec V, const EntitiesFieldData::EntData &data, const double *ptr, InsertMode iora)
	Set values to vector in operator. More...
template<>
MoFEMErrorCode	MatSetValues< EssentialBcStorage > (Mat M, const EntitiesFieldData::EntData &row_data, const EntitiesFieldData::EntData &col_data, const double *ptr, InsertMode iora)
	Set values to matrix in operator. More...
MoFEMErrorCode	schur_mat_set_values_wrap (Mat M, const EntitiesFieldData::EntData &row_data, const EntitiesFieldData::EntData &col_data, const MatrixDouble &mat, InsertMode iora)
template<>
MoFEMErrorCode	MatSetValues< SchurL2Mats > (Mat M, const EntitiesFieldData::EntData &row_data, const EntitiesFieldData::EntData &col_data, const MatrixDouble &mat, InsertMode iora)
template<>
MoFEMErrorCode	VecSetValues< SchurL2Mats > (Vec V, const EntitiesFieldData::EntData &data, const VectorDouble &nf, InsertMode iora)
template<>
MoFEMErrorCode	MatSetValues< AssemblyTypeSelector< SCHUR > > (Mat M, const EntitiesFieldData::EntData &row_data, const EntitiesFieldData::EntData &col_data, const MatrixDouble &mat, InsertMode iora)
template<>
MoFEMErrorCode	VecSetValues< AssemblyTypeSelector< SCHUR > > (Vec V, const EntitiesFieldData::EntData &data, const VectorDouble &nf, InsertMode iora)
template<class T >
static auto	get_sub_iface_options_imp (T *const ptr, int) -> decltype(ptr->getSubInterfaceOptions())
template<class T >
static auto	get_sub_iface_options_imp (T *const ptr, long) -> MoFEMErrorCode
template<int V, typename std::enable_if<(V >=0), int >::type * = nullptr>
void	set_ref_ent_basic_data_ptr_impl (boost::shared_ptr< BasicEntityData > &ptr)
std::ostream &	operator<< (std::ostream &strm, const LogManager::SeverityLevel &level)
static std::vector< med_geometrie_element >	moab2med_element_type (const EntityType type)
std::ostream &	operator<< (std::ostream &os, const MedInterface::FieldData &field_data)
static auto	min_non_abs (const double a, const double b)
std::ostream &	operator<< (std::ostream &os, const FENumeredDofEntity &e)
std::ostream &	operator<< (std::ostream &os, const DisplacementCubitBcData &e)
std::ostream &	operator<< (std::ostream &os, const ForceCubitBcData &e)
std::ostream &	operator<< (std::ostream &os, const VelocityCubitBcData &e)
std::ostream &	operator<< (std::ostream &os, const AccelerationCubitBcData &e)
std::ostream &	operator<< (std::ostream &os, const TemperatureCubitBcData &e)
std::ostream &	operator<< (std::ostream &os, const PressureCubitBcData &e)
std::ostream &	operator<< (std::ostream &os, const HeatFluxCubitBcData &e)
std::ostream &	operator<< (std::ostream &os, const CfgCubitBcData &e)
std::ostream &	operator<< (std::ostream &os, const CubitMeshSets &e)
std::ostream &	operator<< (std::ostream &os, const DofEntity &e)
std::ostream &	operator<< (std::ostream &os, const NumeredDofEntity &e)
std::ostream &	operator<< (std::ostream &os, const FEDofEntity &e)
std::ostream &	operator<< (std::ostream &os, const FiniteElement &e)
std::ostream &	operator<< (std::ostream &os, const EntFiniteElement &e)
std::ostream &	operator<< (std::ostream &os, const NumeredEntFiniteElement &e)
template<typename ENTSVIEW , typename DOFSVIEW , typename EXTRACTOR , typename INSERTER >
static MoFEMErrorCode	get_cache_data_dofs_view (ENTSVIEW &ents_view, DOFSVIEW &dofs_view, EXTRACTOR &&extractor, INSERTER &&inserter)
std::ostream &	operator<< (std::ostream &os, const FieldEntity &e)
std::ostream &	operator<< (std::ostream &os, const Field &e)
std::ostream &	operator<< (std::ostream &os, const FieldEntityEntFiniteElementAdjacencyMap &e)
std::ostream &	operator<< (std::ostream &os, const BlockSetAttributes &e)
std::ostream &	operator<< (std::ostream &os, const Mat_Elastic &e)
std::ostream &	operator<< (std::ostream &os, const Mat_Elastic_EberleinHolzapfel1 &e)
std::ostream &	operator<< (std::ostream &os, const Mat_Thermal &e)
std::ostream &	operator<< (std::ostream &os, const Mat_Moisture &e)
std::ostream &	operator<< (std::ostream &os, const Block_BodyForces &e)
std::ostream &	operator<< (std::ostream &os, const Mat_Elastic_TransIso &e)
std::ostream &	operator<< (std::ostream &os, const Mat_Interf &e)
std::ostream &	operator<< (std::ostream &os, const Problem &e)
std::ostream &	operator<< (std::ostream &os, const RefElement &e)
std::ostream &	operator<< (std::ostream &os, const RefElementVolume &e)
std::ostream &	operator<< (std::ostream &os, const RefElementFace &e)
std::ostream &	operator<< (std::ostream &os, const RefElement_EDGE &e)
std::ostream &	operator<< (std::ostream &os, const RefElement_VERTEX &e)
std::ostream &	operator<< (std::ostream &os, const RefEntity &e)
std::ostream &	operator<< (std::ostream &os, const FieldSeries &e)
std::ostream &	operator<< (std::ostream &os, const FieldSeriesStep &e)
template<EntityType TYPE>
EntityHandle	get_id_for_max_type ()
template<EntityType TYPE>
EntityHandle	get_id_for_min_type ()
EntityHandle	get_id_for_max_type (const EntityType type)
EntityHandle	get_id_for_min_type (const EntityType type)
void *	get_tag_ptr (moab::Interface &moab, Tag th, EntityHandle ent, int *tag_size)
	Get the tag ptr object. More...
PetscErrorCode	DMRegister_MoFEM (const char sname[])
	Register MoFEM problem. More...
PetscErrorCode	DMMoFEMCreateMoFEM (DM dm, MoFEM::Interface *m_field_ptr, const char problem_name[], const MoFEM::BitRefLevel bit_level, const MoFEM::BitRefLevel bit_mask=MoFEM::BitRefLevel().set())
	Must be called by user to set MoFEM data structures. More...
PetscErrorCode	DMMoFEMDuplicateDMCtx (DM dm, DM dm_duplicate)
	Duplicate internal data struture. More...
PetscErrorCode	DMMoFEMSwapDMCtx (DM dm, DM dm_swap)
	Swap internal data struture. More...
PetscErrorCode	DMMoFEMCreateSubDM (DM subdm, DM dm, const char problem_name[])
	Must be called by user to set Sub DM MoFEM data structures. More...
PetscErrorCode	DMoFEMGetInterfacePtr (DM dm, MoFEM::Interface **m_field_ptr)
	Get pointer to MoFEM::Interface. More...
PetscErrorCode	DMMoFEMGetProblemPtr (DM dm, const MoFEM::Problem **problem_ptr)
	Get pointer to problem data structure. More...
PetscErrorCode	DMMoFEMSetDestroyProblem (DM dm, PetscBool destroy_problem)
PetscErrorCode	DMMoFEMGetDestroyProblem (DM dm, PetscBool *destroy_problem)
PetscErrorCode	DMMoFEMSetSquareProblem (DM dm, PetscBool square_problem)
	set squared problem More...
PetscErrorCode	DMMoFEMGetSquareProblem (DM dm, PetscBool *square_problem)
	get squared problem More...
PetscErrorCode	DMMoFEMResolveSharedFiniteElements (DM dm, std::string fe_name)
	Resolve shared entities. More...
PetscErrorCode	DMMoFEMGetProblemFiniteElementLayout (DM dm, std::string fe_name, PetscLayout *layout)
	Get finite elements layout in the problem. More...
PetscErrorCode	DMMoFEMAddElement (DM dm, std::string fe_name)
	add element to dm More...
PetscErrorCode	DMMoFEMAddElement (DM dm, std::vector< std::string > fe_name)
	add element to dm More...
PetscErrorCode	DMMoFEMUnSetElement (DM dm, std::string fe_name)
	unset element from dm More...
PetscErrorCode	DMoFEMMeshToLocalVector (DM dm, Vec l, InsertMode mode, ScatterMode scatter_mode)
	set local (or ghosted) vector values on mesh for partition only More...
PetscErrorCode	DMoFEMMeshToGlobalVector (DM dm, Vec g, InsertMode mode, ScatterMode scatter_mode)
	set ghosted vector values on all existing mesh entities More...
PetscErrorCode	DMoFEMPreProcessFiniteElements (DM dm, MoFEM::FEMethod *method)
	execute finite element method for each element in dm (problem) More...
PetscErrorCode	DMoFEMPostProcessFiniteElements (DM dm, MoFEM::FEMethod *method)
	execute finite element method for each element in dm (problem) More...
PetscErrorCode	DMoFEMLoopFiniteElementsUpAndLowRank (DM dm, const char fe_name[], MoFEM::FEMethod *method, int low_rank, int up_rank, CacheTupleWeakPtr cache_ptr=CacheTupleSharedPtr())
	Executes FEMethod for finite elements in DM. More...
PetscErrorCode	DMoFEMLoopFiniteElementsUpAndLowRank (DM dm, const std::string fe_name, boost::shared_ptr< MoFEM::FEMethod > method, int low_rank, int up_rank, CacheTupleWeakPtr cache_ptr=CacheTupleSharedPtr())
	Executes FEMethod for finite elements in DM. More...
PetscErrorCode	DMoFEMLoopFiniteElements (DM dm, const char fe_name[], MoFEM::FEMethod *method, CacheTupleWeakPtr cache_ptr=CacheTupleSharedPtr())
	Executes FEMethod for finite elements in DM. More...
PetscErrorCode	DMoFEMLoopFiniteElements (DM dm, const std::string fe_name, boost::shared_ptr< MoFEM::FEMethod > method, CacheTupleWeakPtr cache_ptr=CacheTupleSharedPtr())
	Executes FEMethod for finite elements in DM. More...
PetscErrorCode	DMoFEMLoopDofs (DM dm, const char field_name[], MoFEM::DofMethod *method)
	execute method for dofs on field in problem More...
PetscErrorCode	DMMoFEMKSPSetComputeRHS (DM dm, const char fe_name[], MoFEM::FEMethod *method, MoFEM::BasicMethod *pre_only, MoFEM::BasicMethod *post_only)
	set KSP right hand side evaluation function More...
PetscErrorCode	DMMoFEMKSPSetComputeRHS (DM dm, const std::string fe_name, boost::shared_ptr< MoFEM::FEMethod > method, boost::shared_ptr< MoFEM::BasicMethod > pre_only, boost::shared_ptr< MoFEM::BasicMethod > post_only)
	set KSP right hand side evaluation function More...
PetscErrorCode	DMMoFEMKSPSetComputeOperators (DM dm, const char fe_name[], MoFEM::FEMethod *method, MoFEM::BasicMethod *pre_only, MoFEM::BasicMethod *post_only)
	Set KSP operators and push mofem finite element methods. More...
PetscErrorCode	DMMoFEMKSPSetComputeOperators (DM dm, const std::string fe_name, boost::shared_ptr< MoFEM::FEMethod > method, boost::shared_ptr< MoFEM::BasicMethod > pre_only, boost::shared_ptr< MoFEM::BasicMethod > post_only)
	Set KSP operators and push mofem finite element methods. More...
PetscErrorCode	DMMoFEMSNESSetFunction (DM dm, const char fe_name[], MoFEM::FEMethod *method, MoFEM::BasicMethod *pre_only, MoFEM::BasicMethod *post_only)
	set SNES residual evaluation function More...
PetscErrorCode	DMMoFEMSNESSetFunction (DM dm, const std::string fe_name, boost::shared_ptr< MoFEM::FEMethod > method, boost::shared_ptr< MoFEM::BasicMethod > pre_only, boost::shared_ptr< MoFEM::BasicMethod > post_only)
	set SNES residual evaluation function More...
PetscErrorCode	DMMoFEMSNESSetJacobian (DM dm, const char fe_name[], MoFEM::FEMethod *method, MoFEM::BasicMethod *pre_only, MoFEM::BasicMethod *post_only)
	set SNES Jacobian evaluation function More...
PetscErrorCode	DMMoFEMSNESSetJacobian (DM dm, const std::string fe_name, boost::shared_ptr< MoFEM::FEMethod > method, boost::shared_ptr< MoFEM::BasicMethod > pre_only, boost::shared_ptr< MoFEM::BasicMethod > post_only)
	set SNES Jacobian evaluation function More...
PetscErrorCode	DMMoFEMTSSetIFunction (DM dm, const char fe_name[], MoFEM::FEMethod *method, MoFEM::BasicMethod *pre_only, MoFEM::BasicMethod *post_only)
	set TS implicit function evaluation function More...
PetscErrorCode	DMMoFEMTSSetIFunction (DM dm, const std::string fe_name, boost::shared_ptr< MoFEM::FEMethod > method, boost::shared_ptr< MoFEM::BasicMethod > pre_only, boost::shared_ptr< MoFEM::BasicMethod > post_only)
	set TS implicit function evaluation function More...
PetscErrorCode	DMMoFEMTSSetIJacobian (DM dm, const std::string fe_name, boost::shared_ptr< MoFEM::FEMethod > method, boost::shared_ptr< MoFEM::BasicMethod > pre_only, boost::shared_ptr< MoFEM::BasicMethod > post_only)
	set TS Jacobian evaluation function More...
PetscErrorCode	DMMoFEMTSSetIJacobian (DM dm, const char fe_name[], MoFEM::FEMethod *method, MoFEM::BasicMethod *pre_only, MoFEM::BasicMethod *post_only)
	set TS Jacobian evaluation function More...
PetscErrorCode	DMMoFEMTSSetRHSFunction (DM dm, const std::string fe_name, boost::shared_ptr< MoFEM::FEMethod > method, boost::shared_ptr< MoFEM::BasicMethod > pre_only, boost::shared_ptr< MoFEM::BasicMethod > post_only)
	set TS the right hand side function More...
PetscErrorCode	DMMoFEMTSSetRHSFunction (DM dm, const char fe_name[], MoFEM::FEMethod *method, MoFEM::BasicMethod *pre_only, MoFEM::BasicMethod *post_only)
PetscErrorCode	DMMoFEMTSSetRHSJacobian (DM dm, const std::string fe_name, boost::shared_ptr< MoFEM::FEMethod > method, boost::shared_ptr< MoFEM::BasicMethod > pre_only, boost::shared_ptr< MoFEM::BasicMethod > post_only)
	set TS the right hand side jacobian More...
PetscErrorCode	DMMoFEMTSSetRHSJacobian (DM dm, const char fe_name[], MoFEM::FEMethod *method, MoFEM::BasicMethod *pre_only, MoFEM::BasicMethod *post_only)
PetscErrorCode	DMMoFEMTSSetI2Function (DM dm, const std::string fe_name, boost::shared_ptr< MoFEM::FEMethod > method, boost::shared_ptr< MoFEM::BasicMethod > pre_only, boost::shared_ptr< MoFEM::BasicMethod > post_only)
	set TS implicit function evaluation function More...
PetscErrorCode	DMMoFEMTSSetI2Function (DM dm, const char fe_name[], MoFEM::FEMethod *method, MoFEM::BasicMethod *pre_only, MoFEM::BasicMethod *post_only)
	set TS implicit function evaluation function More...
PetscErrorCode	DMMoFEMTSSetI2Jacobian (DM dm, const std::string fe_name, boost::shared_ptr< MoFEM::FEMethod > method, boost::shared_ptr< MoFEM::BasicMethod > pre_only, boost::shared_ptr< MoFEM::BasicMethod > post_only)
	set TS Jacobian evaluation function More...
PetscErrorCode	DMMoFEMTSSetI2Jacobian (DM dm, const char fe_name[], MoFEM::FEMethod *method, MoFEM::BasicMethod *pre_only, MoFEM::BasicMethod *post_only)
	set TS Jacobian evaluation function More...
PetscErrorCode	DMMoFEMTSSetMonitor (DM dm, TS ts, const std::string fe_name, boost::shared_ptr< MoFEM::FEMethod > method, boost::shared_ptr< MoFEM::BasicMethod > pre_only, boost::shared_ptr< MoFEM::BasicMethod > post_only)
	Set Monitor To TS solver. More...
PetscErrorCode	DMMoFEMTSSetMonitor (DM dm, TS ts, const char fe_name[], MoFEM::FEMethod *method, MoFEM::BasicMethod *pre_only, MoFEM::BasicMethod *post_only)
	Set Monitor To TS solver. More...
PetscErrorCode	DMMoFEMGetKspCtx (DM dm, MoFEM::KspCtx **ksp_ctx)
	get MoFEM::KspCtx data structure More...
PetscErrorCode	DMMoFEMGetKspCtx (DM dm, const boost::shared_ptr< MoFEM::KspCtx > &ksp_ctx)
	get MoFEM::KspCtx data structure More...
PetscErrorCode	DMMoFEMSetKspCtx (DM dm, boost::shared_ptr< MoFEM::KspCtx > ksp_ctx)
	set MoFEM::KspCtx data structure More...
PetscErrorCode	DMMoFEMGetSnesCtx (DM dm, MoFEM::SnesCtx **snes_ctx)
	get MoFEM::SnesCtx data structure More...
PetscErrorCode	DMMoFEMGetSnesCtx (DM dm, const boost::shared_ptr< MoFEM::SnesCtx > &snes_ctx)
	get MoFEM::SnesCtx data structure More...
PetscErrorCode	DMMoFEMSetSnesCtx (DM dm, boost::shared_ptr< MoFEM::SnesCtx > snes_ctx)
	Set MoFEM::SnesCtx data structure. More...
PetscErrorCode	DMMoFEMGetTsCtx (DM dm, MoFEM::TsCtx **ts_ctx)
	get MoFEM::TsCtx data structure More...
PetscErrorCode	DMMoFEMGetTsCtx (DM dm, const boost::shared_ptr< MoFEM::TsCtx > &ts_ctx)
	get MoFEM::TsCtx data structure More...
PetscErrorCode	DMMoFEMSetTsCtx (DM dm, boost::shared_ptr< MoFEM::TsCtx > ts_ctx)
	Set MoFEM::TsCtx data structure. More...
PetscErrorCode	DMMoFEMSetIsPartitioned (DM dm, PetscBool is_partitioned)
PetscErrorCode	DMMoFEMGetIsPartitioned (DM dm, PetscBool *is_partitioned)
PetscErrorCode	DMSetOperators_MoFEM (DM dm)
	Set operators for MoFEM dm. More...
PetscErrorCode	DMCreate_MoFEM (DM dm)
	Create dm data structure with MoFEM data structure. More...
PetscErrorCode	DMDestroy_MoFEM (DM dm)
	Destroys dm with MoFEM data structure. More...
PetscErrorCode	DMCreateGlobalVector_MoFEM (DM dm, Vec *g)
	DMShellSetCreateGlobalVector. More...
PetscErrorCode	DMCreateGlobalVector_MoFEM (DM dm, SmartPetscObj< Vec > &g_ptr)
	DMShellSetCreateGlobalVector. More...
PetscErrorCode	DMCreateLocalVector_MoFEM (DM dm, Vec *l)
	DMShellSetCreateLocalVector. More...
PetscErrorCode	DMCreateMatrix_MoFEM (DM dm, Mat *M)
PetscErrorCode	DMCreateMatrix_MoFEM (DM dm, SmartPetscObj< Mat > &M)
PetscErrorCode	DMSetFromOptions_MoFEM (DM dm)
PetscErrorCode	DMSetUp_MoFEM (DM dm)
PetscErrorCode	DMSubDMSetUp_MoFEM (DM subdm)
PetscErrorCode	DMMoFEMAddSubFieldRow (DM dm, const char field_name[])
PetscErrorCode	DMMoFEMAddSubFieldRow (DM dm, const char field_name[], boost::shared_ptr< Range > r_ptr)
	Add field to sub dm problem on rows. More...
PetscErrorCode	DMMoFEMAddSubFieldCol (DM dm, const char field_name[])
PetscErrorCode	DMMoFEMAddSubFieldCol (DM dm, const char field_name[], boost::shared_ptr< Range > r_ptr)
	Add field to sub dm problem on columns. More...
PetscErrorCode	DMMoFEMGetIsSubDM (DM dm, PetscBool *is_sub_dm)
PetscErrorCode	DMMoFEMGetSubRowIS (DM dm, IS *is)
	get sub problem is More...
PetscErrorCode	DMMoFEMGetSubColIS (DM dm, IS *is)
	get sub problem is More...
PetscErrorCode	DMMoFEMAddRowCompositeProblem (DM dm, const char prb_name[])
	Add problem to composite DM on row. More...
PetscErrorCode	DMMoFEMAddColCompositeProblem (DM dm, const char prb_name[])
	Add problem to composite DM on col. More...
PetscErrorCode	DMMoFEMGetIsCompDM (DM dm, PetscBool *is_comp_dm)
	Get if this DM is composite DM. More...
PetscErrorCode	DMGlobalToLocalBegin_MoFEM (DM dm, Vec, InsertMode, Vec)
PetscErrorCode	DMGlobalToLocalEnd_MoFEM (DM dm, Vec, InsertMode, Vec)
PetscErrorCode	DMLocalToGlobalBegin_MoFEM (DM, Vec, InsertMode, Vec)
PetscErrorCode	DMLocalToGlobalEnd_MoFEM (DM, Vec, InsertMode, Vec)
PetscErrorCode	DMCreateFieldIS_MoFEM (DM dm, PetscInt *numFields, char ***fieldNames, IS **fields)
PetscErrorCode	DMMoFEMGetFieldIS (DM dm, RowColData rc, const char field_name[], IS *is)
	get field is in the problem More...
PetscErrorCode	DMMoFEMSetVerbosity (DM dm, const int verb)
	Set verbosity level. More...
auto	getProblemPtr (DM dm)
	get problem pointer from DM More...
auto	createDMMatrix (DM dm)
	Get smart matrix from DM. More...
DEPRECATED auto	smartCreateDMMatrix (DM dm)
auto	createDMVector (DM dm)
	Get smart vector from DM. More...
DEPRECATED auto	smartCreateDMVector (DM dm)
auto	getDMKspCtx (DM dm)
	Get KSP context data structure used by DM. More...
DEPRECATED auto	smartGetDMKspCtx (DM dm)
auto	getDMSnesCtx (DM dm)
	Get SNES context data structure used by DM. More...
DEPRECATED auto	smartGetDMSnesCtx (DM dm)
auto	getDMTsCtx (DM dm)
	Get TS context data structure used by DM. More...
DEPRECATED auto	smartGetDMTsCtx (DM dm)
auto	getDMSubData (DM dm)
	Get sub problem data structure. More...
template<class S , class T0 , class T1 , class T2 >
static PetscErrorCode	DMMoFEMKSPSetComputeRHS (DM dm, S fe_name, T0 method, T1 pre_only, T2 post_only)
template<class S , class T0 , class T1 , class T2 >
static PetscErrorCode	DMMoFEMKSPSetComputeOperators (DM dm, S fe_name, T0 method, T1 pre_only, T2 post_only)
template<class S , class T0 , class T1 , class T2 >
static PetscErrorCode	DMMoFEMSNESSetFunction (DM dm, S fe_name, T0 method, T1 pre_only, T2 post_only)
template<class S , class T0 , class T1 , class T2 >
static PetscErrorCode	DMMoFEMSNESSetJacobian (DM dm, S fe_name, T0 method, T1 pre_only, T2 post_only)
template<class S , class T0 , class T1 , class T2 >
static PetscErrorCode	DMMoFEMTSSetIFunction (DM dm, S fe_name, T0 method, T1 pre_only, T2 post_only)
template<class S , class T0 , class T1 , class T2 >
static PetscErrorCode	DMMoFEMTSSetIJacobian (DM dm, S fe_name, T0 method, T1 pre_only, T2 post_only)
template<class S , class T0 , class T1 , class T2 >
static PetscErrorCode	DMMoFEMTSSetRHSFunction (DM dm, S fe_name, T0 method, T1 pre_only, T2 post_only)
template<class S , class T0 , class T1 , class T2 >
static PetscErrorCode	DMMoFEMTSSetRHSJacobian (DM dm, S fe_name, T0 method, T1 pre_only, T2 post_only)
template<class S , class T0 , class T1 , class T2 >
static PetscErrorCode	DMMoFEMTSSetI2Function (DM dm, S fe_name, T0 method, T1 pre_only, T2 post_only)
template<class S , class T0 , class T1 , class T2 >
static PetscErrorCode	DMMoFEMTSSetI2Jacobian (DM dm, S fe_name, T0 method, T1 pre_only, T2 post_only)
template<class S , class T0 , class T1 , class T2 >
static PetscErrorCode	DMMoFEMTSSetMonitor (DM dm, TS ts, S fe_name, T0 method, T1 pre_only, T2 post_only)
PetscErrorCode	KspRhs (KSP ksp, Vec f, void *ctx)
	Run over elements in the lists. More...
PetscErrorCode	KspMat (KSP ksp, Mat A, Mat B, void *ctx)
	Run over elements in the list. More...
PetscErrorCode	SnesRhs (SNES snes, Vec x, Vec f, void *ctx)
	This is MoFEM implementation for the right hand side (residual vector) evaluation in SNES solver. More...
PetscErrorCode	SnesMat (SNES snes, Vec x, Mat A, Mat B, void *ctx)
	This is MoFEM implementation for the left hand side (tangent matrix) evaluation in SNES solver. More...
MoFEMErrorCode	SnesMoFEMSetAssemblyType (SNES snes, MatAssemblyType type)
	Set assembly type at the end of SnesMat. More...
MoFEMErrorCode	SnesMoFEMSetBehavior (SNES snes, MoFEMTypes bh)
	Set behavior if finite element in sequence does not exist. More...
MoFEMErrorCode	MoFEMSNESMonitorFields (SNES snes, PetscInt its, PetscReal fgnorm, SnesCtx *snes_ctx)
	Sens monitor printing residual field by field. More...
PetscErrorCode	TsSetIFunction (TS ts, PetscReal t, Vec u, Vec u_t, Vec F, void *ctx)
	Set IFunction for TS solver. More...
PetscErrorCode	TsSetIJacobian (TS ts, PetscReal t, Vec u, Vec u_t, PetscReal a, Mat A, Mat B, void *ctx)
	Set function evaluating jacobina in TS solver. More...
PetscErrorCode	TsMonitorSet (TS ts, PetscInt step, PetscReal t, Vec u, void *ctx)
	Set monitor for TS solver. More...
PetscErrorCode	TsSetRHSFunction (TS ts, PetscReal t, Vec u, Vec F, void *ctx)
	TS solver function. More...
PetscErrorCode	TsSetRHSJacobian (TS ts, PetscReal t, Vec u, Mat A, Mat B, void *ctx)
	TS solver function. More...
PetscErrorCode	TsSetI2Jacobian (TS ts, PetscReal t, Vec u, Vec u_t, Vec u_tt, PetscReal a, PetscReal aa, Mat A, Mat B, void *ctx)
	Calculation Jaconian for second order PDE in time. More...
PetscErrorCode	TsSetI2Function (TS ts, PetscReal t, Vec u, Vec u_t, Vec u_tt, Vec F, void *ctx)
	Calculation the right hand side for second order PDE in time. More...
MoFEMErrorCode	set_plastic_ep_dm (MoFEM::Interface &m_field, SmartPetscObj< DM > &dm, SmartPetscObj< DM > &dm_plastic)
MoFEMErrorCode	set_plastic_tau_dm (MoFEM::Interface &m_field, SmartPetscObj< DM > &dm, SmartPetscObj< DM > &dm_plastic_tau)
MoFEMErrorCode	set_contact_dm (MoFEM::Interface &m_field, SmartPetscObj< DM > &dm, SmartPetscObj< DM > &dm_contact)

Variables
DEPRECATED typedef EdgeElementForcesAndSourcesCore	EdgeElementForcesAndSourcesCoreBase
DEPRECATED typedef EntitiesFieldData	DataForcesAndSourcesCore
DEPRECATED typedef DerivedEntitiesFieldData	DerivedDataForcesAndSourcesCore
DEPRECATED typedef FaceElementForcesAndSourcesCore	FaceElementForcesAndSourcesCoreBase
DEPRECATED typedef FlatPrismElementForcesAndSourcesCore	FlatPrismElementForcesAndSurcesCore
	USe FlatPrismElementForcesAndSourcesCore. More...
DEPRECATED typedef ForcesAndSourcesCore	ForcesAndSurcesCore
DEPRECATED typedef VolumeElementForcesAndSourcesCore	VolumeElementForcesAndSourcesCoreBase
DEPRECATED typedef VolumeElementForcesAndSourcesCoreOnContactPrismSide	VolumeElementForcesAndSourcesCoreOnContactPrismSideBase
DEPRECATED typedef VolumeElementForcesAndSourcesCoreOnSide	VolumeElementForcesAndSourcesCoreOnSideBase
DEPRECATED typedef DofMethod	EntMethod
const EntityHandle	no_handle
	No entity handle is indicated by zero handle, i.e. root meshset. More...
static constexpr int	edges_conn [] = {0, 1, 1, 2, 2, 0, 0, 3, 1, 3, 2, 3}
static constexpr int	oposite_edge [] = {5, 3, 4, 1, 2, 0}
static constexpr int	edge_permutations [6][6]
static constexpr int	edge_mirror_cross [6] = {0, 3, 4, 1, 2, 5}
static constexpr int	edge_mirror_vertical [6] = {0, 4, 3, 2, 1, 5}
static constexpr int	cyclic_node_rotate_face_3 [3][4]
static constexpr int	cyclic_edge_rotate_face_3 [3][6]
static constexpr char	edge_bits_mark [] = {1, 2, 4, 8, 16, 32}
Tag	th
Field_multiIndex::index< FieldName_mi_tag >::type::iterator	field_it
VectorDouble	L
VectorDouble	K
static char	dummy_file
boost::weak_ptr< BlockMatContainer >	block_mat_container_ptr

Detailed Description

implementation of Data Operators for Forces and Sources

name space of MoFEM library functions and classes

file DataOperators.cpp

Typedef Documentation

BaseDerivatives

using MoFEM::BaseDerivatives = typedef EntitiesFieldData::EntData::BaseDerivatives

Definition at line 1117 of file EntitiesFieldData.hpp.

BasicMethodsSequence

typedef std::deque<BasicMethodPtr> MoFEM::BasicMethodsSequence

Definition at line 57 of file AuxPETSc.hpp.

BcTemperature

template<CubitBC BC>

using MoFEM::BcTemperature = typedef BcScalarMeshsetType<BC>

Definition at line 16 of file BcManager.hpp.

BlockMatContainer

typedef multi_index_container< BlockMatData, indexed_by< ordered_unique< composite_key< BlockMatData, member<BlockMatData, std::string, &BlockMatData::rowField>, member<BlockMatData, std::string, &BlockMatData::colField>, member<BlockMatData, EntityType, &BlockMatData::rowType>, member<BlockMatData, EntityType, &BlockMatData::colType>, member<BlockMatData, int, &BlockMatData::rowSide>, member<BlockMatData, int, &BlockMatData::colSide> > >, ordered_non_unique< composite_key< BlockMatData, member<BlockMatData, std::string, &BlockMatData::rowField>, member<BlockMatData, std::string, &BlockMatData::colField>, member<BlockMatData, EntityType, &BlockMatData::rowType>, member<BlockMatData, EntityType, &BlockMatData::colType> > >, ordered_non_unique< composite_key< BlockMatData, member<BlockMatData, std::string, &BlockMatData::rowField>, member<BlockMatData, std::string, &BlockMatData::colField> > >, ordered_non_unique< member<BlockMatData, std::string, &BlockMatData::rowField> >, ordered_non_unique< member<BlockMatData, std::string, &BlockMatData::colField> > > > MoFEM::BlockMatContainer

Definition at line 129 of file BlockMatData.hpp.

BoundaryEle

using MoFEM::BoundaryEle = typedef FaceElementForcesAndSourcesCore

Definition at line 137 of file MultifieldPlasticity.hpp.

BoundaryEleOp

using MoFEM::BoundaryEleOp = typedef BoundaryEle::UserDataOperator

Definition at line 138 of file MultifieldPlasticity.hpp.

BoundaryEleOpAssembly

using MoFEM::BoundaryEleOpAssembly = typedef FormsIntegrators<BoundaryEleOp>::Assembly<USER_ASSEMBLE>::OpBase

Definition at line 139 of file MultifieldPlasticity.hpp.

CacheTuple

using MoFEM::CacheTuple = typedef std::tuple< std::vector<EntityCacheDofs>, std::vector<EntityCacheNumeredDofs>, std::vector<EntityCacheNumeredDofs> >

Definition at line 487 of file FEMultiIndices.hpp.

CacheTupleSharedPtr

using MoFEM::CacheTupleSharedPtr = typedef boost::shared_ptr<CacheTuple>

Definition at line 495 of file FEMultiIndices.hpp.

CacheTupleWeakPtr

using MoFEM::CacheTupleWeakPtr = typedef boost::weak_ptr<CacheTuple>

Definition at line 494 of file FEMultiIndices.hpp.

ConstantFun

using MoFEM::ConstantFun = typedef boost::function<double()>

Constant function type.

Definition at line 158 of file FormsIntegrators.hpp.

Core

using MoFEM::Core = typedef CoreTmp<0>

Definition at line 1094 of file Core.hpp.

CubitMeshSet_multiIndex

MoFEM::CubitMeshSet_multiIndex

Stores data about meshsets (see CubitMeshSets) storing data about boundary conditions, interfaces, sidesets, nodests, blocksets.

Parameters

Meshset_mi_tag	index by meshset handle
CubitMeshsetType_mi_tag	index by bc type, see CubitBC
CubitMeshsetMaskedType_mi_tag	index by NODESET, SIDESET, BLOCKSET only
CubitMeshsets_name	index by meshset name
Composite_Cubit_msId_And_MeshsetType_mi_tag	index by meshset id and type NODESET, SIDESET or BLOCKSET

Example:

  MeshsetsManager *m_mng;
  CHKERR m_field.getInterface(m_mng);
  auto &index = m_mng->getMeshsetsMultindex();
 
 
  auto mit =
index.get<CubitMeshsetMaskedType_mi_tag>().lower_bound(BLOCKSET); auto
hi_mit =
index.get<CubitMeshsetMaskedType_mi_tag>().upper_bound(BLOCKSET);
 
  // Make a loop over all BLOCKSET
  for(;mit!=hi_mit;mit++) {
    int id = mit->getMeshsetId();            // get blockset id
    EntityHandle handle = mit->getMeshset(); // get block meshset
    std::vector< double > attributes;
    // get block attributes
    auto mit->getAttributes(attributes);
    // do something
  }

Definition at line 383 of file BCMultiIndices.hpp.

CubitMeshsetById

typedef CubitMeshSet_multiIndex::index<CubitMeshsetType_mi_tag>::type MoFEM::CubitMeshsetById

Definition at line 24 of file MeshsetsManager.hpp.

CubitMeshsetByMask

typedef CubitMeshSet_multiIndex::index<CubitMeshsetMaskedType_mi_tag>::type MoFEM::CubitMeshsetByMask

Definition at line 18 of file MeshsetsManager.hpp.

CubitMeshsetByName

typedef CubitMeshSet_multiIndex::index<CubitMeshsets_name>::type MoFEM::CubitMeshsetByName

Definition at line 21 of file MeshsetsManager.hpp.

CubitMeshsetByType

typedef CubitMeshSet_multiIndex::index<CubitMeshsetType_mi_tag>::type MoFEM::CubitMeshsetByType

Definition at line 15 of file MeshsetsManager.hpp.

DofEntityByUId

using MoFEM::DofEntityByUId = typedef DofEntity_multiIndex::index<Unique_mi_tag>::type

Definition at line 319 of file DofsMultiIndices.hpp.

DofsAllocator

using MoFEM::DofsAllocator = typedef ublas::unbounded_array< FEDofEntity *, std::allocator<FEDofEntity *> >

Definition at line 17 of file EntitiesFieldData.hpp.

DomainEle

using MoFEM::DomainEle = typedef VolumeElementForcesAndSourcesCore

Definition at line 127 of file MultifieldPlasticity.hpp.

DomainEleOp

using MoFEM::DomainEleOp = typedef DomainEle::UserDataOperator

Definition at line 128 of file MultifieldPlasticity.hpp.

DomainEleOpAssembly

using MoFEM::DomainEleOpAssembly = typedef FormsIntegrators<DomainEleOp>::Assembly<USER_ASSEMBLE>::OpBase

Definition at line 129 of file MultifieldPlasticity.hpp.

DomainSideEle

using MoFEM::DomainSideEle = typedef VolumeElementForcesAndSourcesCoreOnSide

Definition at line 142 of file MultifieldPlasticity.hpp.

DomainSideEleOp

using MoFEM::DomainSideEleOp = typedef DomainSideEle::UserDataOperator

Definition at line 143 of file MultifieldPlasticity.hpp.

DomainSideEleOpAssembly

using MoFEM::DomainSideEleOpAssembly = typedef FormsIntegrators<DomainSideEleOp>::Assembly<USER_ASSEMBLE>::OpBase

Definition at line 144 of file MultifieldPlasticity.hpp.

EmptyFieldBlocks

typedef Problem::EmptyFieldBlocks MoFEM::EmptyFieldBlocks

Definition at line 562 of file ProblemsMultiIndices.hpp.

EntData

typedef DataForcesAndSourcesCore::EntData ElectroPhysiology::EntData

Definition at line 125 of file MultifieldPlasticity.hpp.

FEFun

using MoFEM::FEFun = typedef boost::function<double(const FEMethod *fe_ptr)>

Lambda function used to scale with time.

Definition at line 152 of file FormsIntegrators.hpp.

FEMethodsSequence

typedef std::deque<PairNameFEMethodPtr> MoFEM::FEMethodsSequence

Definition at line 56 of file AuxPETSc.hpp.

Field_multiIndex_view

typedef multi_index_container< boost::shared_ptr<Field>, indexed_by< ordered_unique<tag<BitFieldId_mi_tag>, const_mem_fun<Field, const BitFieldId &, &Field::getId>, LtBit<BitFieldId> > > > MoFEM::Field_multiIndex_view

Definition at line 475 of file FieldMultiIndices.hpp.

FieldEntAllocator

using MoFEM::FieldEntAllocator = typedef ublas::unbounded_array< FieldEntity *, std::allocator<FieldEntity *> >

Definition at line 25 of file EntitiesFieldData.hpp.

FieldEntity_multiIndex

using MoFEM::FieldEntity_multiIndex = typedef multi_index_container< boost::shared_ptr<FieldEntity>, indexed_by< ordered_unique<tag<Unique_mi_tag>, member<FieldEntity, UId, &FieldEntity::localUId> >, ordered_non_unique<tag<Ent_mi_tag>, const_mem_fun<FieldEntity::interface_type_RefEntity, EntityHandle, &FieldEntity::getEnt> > > >

Definition at line 480 of file FieldEntsMultiIndices.hpp.

FieldEntity_multiIndex_ent_view

using MoFEM::FieldEntity_multiIndex_ent_view = typedef multi_index_container< boost::shared_ptr<FieldEntity>, indexed_by< sequenced<>, ordered_non_unique<tag<Ent_mi_tag>, const_mem_fun<FieldEntity::interface_type_RefEntity, EntityHandle, &FieldEntity::getEnt> > > >

Definition at line 446 of file FieldEntsMultiIndices.hpp.

FieldEntity_multiIndex_spaceType_view

using MoFEM::FieldEntity_multiIndex_spaceType_view = typedef multi_index_container< boost::shared_ptr<FieldEntity>, indexed_by< sequenced<>, ordered_non_unique< tag<Composite_EntType_and_Space_mi_tag>, composite_key<FieldEntity, const_mem_fun<FieldEntity::interface_type_RefEntity, EntityType, &FieldEntity::getEntType>, const_mem_fun<FieldEntity::interface_type_Field, FieldSpace, &FieldEntity::getSpace> > > > >

Definition at line 458 of file FieldEntsMultiIndices.hpp.

FieldEntity_vector_view

typedef std::vector<boost::weak_ptr<FieldEntity> > MoFEM::FieldEntity_vector_view

Definition at line 478 of file FieldEntsMultiIndices.hpp.

Interface

using MoFEM::Interface = typedef DeprecatedCoreInterface

Definition at line 1975 of file Interface.hpp.

NumeredDofEntity_multiIndex_coeff_idx_ordered_non_unique

using MoFEM::NumeredDofEntity_multiIndex_coeff_idx_ordered_non_unique = typedef multi_index_container< boost::shared_ptr<NumeredDofEntity>, indexed_by<ordered_non_unique<const_mem_fun< NumeredDofEntity::interface_type_DofEntity, FieldCoefficientsNumber, &NumeredDofEntity::getDofCoeffIdx> >> >

Definition at line 516 of file DofsMultiIndices.hpp.

NumeredDofEntity_multiIndex_idx_view_hashed

using MoFEM::NumeredDofEntity_multiIndex_idx_view_hashed = typedef multi_index_container< boost::shared_ptr<NumeredDofEntity>, indexed_by<hashed_unique<const_mem_fun<NumeredDofEntity, DofIdx, &NumeredDofEntity::getDofIdx> >> >

Definition at line 505 of file DofsMultiIndices.hpp.

NumeredDofEntity_multiIndex_petsc_local_dof_view_ordered_non_unique

using MoFEM::NumeredDofEntity_multiIndex_petsc_local_dof_view_ordered_non_unique = typedef multi_index_container<boost::shared_ptr<NumeredDofEntity>, indexed_by<ordered_non_unique<const_mem_fun< NumeredDofEntity, DofIdx, &NumeredDofEntity::getPetscLocalDofIdx> >> >

Definition at line 510 of file DofsMultiIndices.hpp.

NumeredDofEntity_multiIndex_uid_view_ordered

using MoFEM::NumeredDofEntity_multiIndex_uid_view_ordered = typedef multi_index_container<boost::shared_ptr<NumeredDofEntity>, indexed_by< ordered_unique<const_mem_fun< NumeredDofEntity::interface_type_DofEntity, UId, &NumeredDofEntity::getLocalUniqueId > > > >

Definition at line 492 of file DofsMultiIndices.hpp.

OpCalculateHOJacForFace

using MoFEM::OpCalculateHOJacForFace = typedef OpCalculateHOJacForFaceImpl<2>

Definition at line 264 of file HODataOperators.hpp.

OpCalculateHOJacForFaceEmbeddedIn3DSpace

using MoFEM::OpCalculateHOJacForFaceEmbeddedIn3DSpace = typedef OpCalculateHOJacForFaceImpl<3>

Definition at line 265 of file HODataOperators.hpp.

OpCalculateHOJacVolume

using MoFEM::OpCalculateHOJacVolume = typedef OpCalculateHOJacForVolume

Deprecated:

use OpCalculateHOJacForVolume

Definition at line 34 of file HODataOperators.hpp.

OpCalculateScalarFieldValuesDot

using MoFEM::OpCalculateScalarFieldValuesDot = typedef OpCalculateScalarFieldValuesFromPetscVecImpl<PetscData::CTX_SET_X_T>

Definition at line 272 of file UserDataOperators.hpp.

OpCalculateScalarFieldValuesDotDot

using MoFEM::OpCalculateScalarFieldValuesDotDot = typedef OpCalculateScalarFieldValuesFromPetscVecImpl<PetscData::CTX_SET_X_TT>

Definition at line 274 of file UserDataOperators.hpp.

OpCalculateScalarValuesDot

using MoFEM::OpCalculateScalarValuesDot = typedef OpCalculateScalarFieldValuesDot

Deprecated:

Name inconsistent with other operators

Definition at line 281 of file UserDataOperators.hpp.

OpSetContrariantPiolaTransformOnEdge

using MoFEM::OpSetContrariantPiolaTransformOnEdge = typedef OpSetContravariantPiolaTransformOnEdge2D

Deprecated:

Name is deprecated and this is added for back compatibility

Definition at line 3049 of file UserDataOperators.hpp.

OpSetContravariantPiolaTransformOnFace2D

using MoFEM::OpSetContravariantPiolaTransformOnFace2D = typedef OpSetContravariantPiolaTransformOnFace2DImpl<2>

Definition at line 3024 of file UserDataOperators.hpp.

OpSetContravariantPiolaTransformOnFace2DEmbeddedIn3DSpace

using MoFEM::OpSetContravariantPiolaTransformOnFace2DEmbeddedIn3DSpace = typedef OpSetContravariantPiolaTransformOnFace2DImpl<3>

Definition at line 3026 of file UserDataOperators.hpp.

OpSetCovariantPiolaTransformOnFace2D

using MoFEM::OpSetCovariantPiolaTransformOnFace2D = typedef OpSetCovariantPiolaTransformOnFace2DImpl<2>

Definition at line 2976 of file UserDataOperators.hpp.

OpSetInvJacHcurlFace

using MoFEM::OpSetInvJacHcurlFace = typedef OpSetInvJacHcurlFaceImpl<2>

Definition at line 2927 of file UserDataOperators.hpp.

OpSetInvJacHcurlFaceEmbeddedIn3DSpace

using MoFEM::OpSetInvJacHcurlFaceEmbeddedIn3DSpace = typedef OpSetInvJacHcurlFaceImpl<3>

Definition at line 2928 of file UserDataOperators.hpp.

PostProcBrokenMeshInMoabBaseBegin

using MoFEM::PostProcBrokenMeshInMoabBaseBegin = typedef PostProcBrokenMeshInMoabBaseBeginImpl< PostProcBrokenMeshInMoabBase<ForcesAndSourcesCore> >

Enable to run stack of post-processing elements. Use this to begin stack.

See scalar_check_approximation.cpp

Definition at line 935 of file PostProcBrokenMeshInMoabBase.hpp.

PostProcBrokenMeshInMoabBaseCont

template<typename E >

using MoFEM::PostProcBrokenMeshInMoabBaseCont = typedef PostProcBrokenMeshInMoabBaseContImpl<PostProcBrokenMeshInMoabBase<E> >

Enable to run stack of post-processing elements.

See scalar_check_approximation.cpp

Template Parameters

E

Definition at line 946 of file PostProcBrokenMeshInMoabBase.hpp.

PostProcBrokenMeshInMoabBaseEnd

using MoFEM::PostProcBrokenMeshInMoabBaseEnd = typedef PostProcBrokenMeshInMoabBaseEndImpl< PostProcBrokenMeshInMoabBase<ForcesAndSourcesCore> >

Enable to run stack of post-processing elements. Use this to end stack.

Definition at line 953 of file PostProcBrokenMeshInMoabBase.hpp.

PostProcGenerateRefMeshPtr

using MoFEM::PostProcGenerateRefMeshPtr = typedef boost::shared_ptr<PostProcGenerateRefMeshBase>

Definition at line 53 of file PostProcBrokenMeshInMoabBase.hpp.

RefElement_multiIndex_parents_view

typedef multi_index_container< boost::shared_ptr<RefElement>, indexed_by< ordered_unique<tag<Ent_mi_tag>, const_mem_fun<RefElement::interface_type_RefEntity, EntityHandle, &RefElement::getEnt> >, ordered_non_unique< tag<Ent_Ent_mi_tag>, const_mem_fun<RefElement::interface_type_RefEntity, EntityHandle, &RefElement::getParentEnt> >, ordered_non_unique< tag<Composite_ParentEnt_And_BitsOfRefinedEdges_mi_tag>, composite_key< RefElement, const_mem_fun<RefElement::interface_type_RefEntity, EntityHandle, &RefElement::getParentEnt>, const_mem_fun<RefElement, int, &RefElement::getBitRefEdgesUlong> > > > > MoFEM::RefElement_multiIndex_parents_view

Definition at line 30 of file MeshRefinement.cpp.

RefEntity

using MoFEM::RefEntity = typedef RefEntityTmp<0>

Definition at line 566 of file RefEntsMultiIndices.hpp.

RefEntity_multiIndex_view_by_ordered_parent_entity

using MoFEM::RefEntity_multiIndex_view_by_ordered_parent_entity = typedef multi_index_container< boost::shared_ptr<RefEntity>, indexed_by<ordered_non_unique<const_mem_fun<RefEntity, EntityHandle, &RefEntity::getParentEnt> >, hashed_unique< tag<Composite_EntType_and_ParentEntType_mi_tag>, composite_key<boost::shared_ptr<RefEntity>, const_mem_fun<RefEntity, EntityHandle, &RefEntity::getEnt>, const_mem_fun<RefEntity, EntityHandle, &RefEntity::getParentEnt> >> > >

Definition at line 779 of file RefEntsMultiIndices.hpp.

RefEntity_multiIndex_view_sequence_ordered_view

using MoFEM::RefEntity_multiIndex_view_sequence_ordered_view = typedef multi_index_container< boost::shared_ptr<RefEntity>, indexed_by< sequenced<>, ordered_unique<tag<Ent_mi_tag>, const_mem_fun<RefEntity, EntityHandle, &RefEntity::getEnt> >> >

Definition at line 794 of file RefEntsMultiIndices.hpp.

Sev

typedef LogManager::SeverityLevel MoFEM::Sev

Examples

ThermoElasticOps.hpp.

Definition at line 17 of file CoreTemplates.hpp.

ShardVec

template<typename T >

using MoFEM::ShardVec = typedef boost::shared_ptr<std::vector<T> >

Definition at line 10 of file Templates.hpp.

SkeletonEle

using MoFEM::SkeletonEle = typedef FaceElementForcesAndSourcesCore

Definition at line 132 of file MultifieldPlasticity.hpp.

SkeletonEleOp

using MoFEM::SkeletonEleOp = typedef SkeletonEle::UserDataOperator

Definition at line 133 of file MultifieldPlasticity.hpp.

SkeletonEleOpAssembly

using MoFEM::SkeletonEleOpAssembly = typedef FormsIntegrators<SkeletonEleOp>::Assembly<USER_ASSEMBLE>::OpBase

Definition at line 134 of file MultifieldPlasticity.hpp.

TimeFun

using MoFEM::TimeFun = typedef boost::function<double(double)>

Lambda function used to scale with time.

Definition at line 146 of file FormsIntegrators.hpp.

TimeScaleVector2

using MoFEM::TimeScaleVector2 = typedef TimeScaleVector<3>

Definition at line 127 of file ScalingMethod.hpp.

TimeScaleVector3

using MoFEM::TimeScaleVector3 = typedef TimeScaleVector<3>

Definition at line 126 of file ScalingMethod.hpp.

VecOfTimeScalingMethods

using MoFEM::VecOfTimeScalingMethods = typedef std::vector<boost::shared_ptr<ScalingMethod> >

Vector of time scaling methods.

Definition at line 20 of file Natural.hpp.

VecOfTimeVectorScalingMethods

template<int FIELD_DIM>

using MoFEM::VecOfTimeVectorScalingMethods = typedef std::vector<boost::shared_ptr<TimeScaleVector<FIELD_DIM> >>

Vector of time vector scaling methods.

Definition at line 27 of file Natural.hpp.

VectorDofs

using MoFEM::VectorDofs = typedef ublas::vector<FEDofEntity *, DofsAllocator>

Definition at line 23 of file EntitiesFieldData.hpp.

VectorFieldEntities

using MoFEM::VectorFieldEntities = typedef ublas::vector<FieldEntity *, FieldEntAllocator>

Definition at line 31 of file EntitiesFieldData.hpp.

Function Documentation

addHOOpsFace3D()

template<typename E >

MoFEMErrorCode MoFEM::addHOOpsFace3D	(	const std::string	field,
		E &	e,
		bool	hcurl,
		bool	hdiv
	)

Deprecated:

do not use this function, instead use AddHOOps.

Template Parameters

E

Parameters

field
e
hcurl
hdiv

Returns

MoFEMErrorCode

Definition at line 779 of file HODataOperators.hpp.

                                                                {
  std::vector<FieldSpace> spaces;
  if (hcurl)
    spaces.push_back(HCURL);
  if (hdiv)
    spaces.push_back(HDIV);
  return AddHOOps<2, 3, 3>::add(e.getOpPtrVector(), spaces, field);
}

addHOOpsVol()

template<typename E >

MoFEMErrorCode MoFEM::addHOOpsVol	(	const std::string	field,
		E &	e,
		bool	h1,
		bool	hcurl,
		bool	hdiv,
		bool	l2
	)

Deprecated:

do not use this function, instead use AddHOOps.

Template Parameters

E

Parameters

field
e
h1
hcurl
hdiv
l2

Returns

MoFEMErrorCode

Definition at line 754 of file HODataOperators.hpp.

                                                                      {
  std::vector<FieldSpace> spaces;
  if (h1)
    spaces.push_back(H1);
  if (hcurl)
    spaces.push_back(HCURL);
  if (hdiv)
    spaces.push_back(HDIV);
  if (l2)
    spaces.push_back(L2);
  return AddHOOps<3, 3, 3>::add(e.getOpPtrVector(), spaces, field);
}

cmp_uid_hi()

static auto MoFEM::cmp_uid_hi ( const UId &  b, const boost::weak_ptr< FieldEntity > &  a  )

static

Definition at line 29 of file ForcesAndSourcesCore.cpp.

                                                                          {
  if (auto a_ptr = a.lock()) {
    if (b < a_ptr->getLocalUniqueId())
      return true;
    else
      return false;
  } else {
    return true;
  }
}

cmp_uid_lo()

static auto MoFEM::cmp_uid_lo ( const boost::weak_ptr< FieldEntity > &  a, const UId &  b  )

static

Definition at line 18 of file ForcesAndSourcesCore.cpp.

                                                                          {
  if (auto a_ptr = a.lock()) {
    if (a_ptr->getLocalUniqueId() < b)
      return true;
    else
      return false;
  } else {
    return false;
  }
}

computeEigenValuesSymmetric() [1/6]

template<int DIM>

DEPRECATED MoFEMErrorCode MoFEM::computeEigenValuesSymmetric	(	const FTensor::Tensor2_symmetric< double, DIM > &	mat,
		FTensor::Tensor1< double, DIM > &	eig,
		FTensor::Tensor2< double, DIM, DIM > &	eigen_vec
	)

Deprecated:

do not use, is kept for backward compatibility

Definition at line 1467 of file Templates.hpp.

                                                                         {
  return computeEigenValuesSymmetric<DIM, double, double, double>(mat, eig,
                                                                  eigen_vec);
}

computeEigenValuesSymmetric() [2/6]

template<int DIM>

DEPRECATED MoFEMErrorCode MoFEM::computeEigenValuesSymmetric	(	const FTensor::Tensor2_symmetric< FTensor::PackPtr< double *, 1 >, DIM > &	mat,
		FTensor::Tensor1< double, DIM > &	eig,
		FTensor::Tensor2< double, DIM, DIM > &	eigen_vec
	)

Deprecated:

do not use, is kept for backward compatibility

Definition at line 1478 of file Templates.hpp.

                                                 {
  return computeEigenValuesSymmetric<DIM, FTensor::PackPtr<double *, 1>, double,
                                     double>(mat, eig, eigen_vec);
}

computeEigenValuesSymmetric() [3/6]

template<int DIM, typename T1 , typename T2 , typename T3 >

MoFEMErrorCode MoFEM::computeEigenValuesSymmetric ( const FTensor::Tensor2_symmetric< T1, DIM > &  mat, FTensor::Tensor1< T2, DIM > &  eig, FTensor::Tensor2< T3, DIM, DIM > &  eigen_vec  )

inline

compute eigenvalues of a symmetric tensor using lapack dsyev

Template Parameters

DIM

Parameters

mat	input tensor pointer of size DIM x DIM
eig	output eigen values sorted
eigen_vec	output matrix of row eigen vectors

Returns

MoFEMErrorCode

Definition at line 1438 of file Templates.hpp.

                                             {
  MoFEMFunctionBegin;
  for (int ii = 0; ii != DIM; ii++)
    for (int jj = 0; jj != DIM; jj++)
      eigen_vec(ii, jj) = mat(ii, jj);
 
  CHKERR computeEigenValuesSymmetric(eigen_vec, eig);
 
  MoFEMFunctionReturn(0);
}

computeEigenValuesSymmetric() [4/6]

MoFEMErrorCode MoFEM::computeEigenValuesSymmetric ( const MatrixDouble &  mat, VectorDouble &  eig, MatrixDouble &  eigen_vec  )

inline

compute eigenvalues of a symmetric matrix using lapack dsyev

Parameters

mat	input symmetric matrix
eig	output eigen values sorted
eigen_vec	output matrix of row eigen vectors

Returns

MoFEMErrorCode

Definition at line 1371 of file Templates.hpp.

                                                                           {
  MoFEMFunctionBegin;
 
  const size_t M = mat.size1();
  const size_t N = mat.size2();
 
  if (M == 0 || M != N)
    SETERRQ2(
        PETSC_COMM_SELF, MOFEM_DATA_INCONSISTENCY,
        "The input matrix for eigen value computation is not square %d != %d",
        M, N);
  if (eig.size() != M)
    eig.resize(M, false);
 
  eigen_vec = mat;
  const int n = M;
  const int lda = M;
  const int size = (M + 2) * M;
  int lwork = size;
  double *work = new double[size];
 
  if (lapack_dsyev('V', 'U', n, &*eigen_vec.data().begin(), lda,
                   &*eig.data().begin(), work, lwork) > 0)
    SETERRQ(PETSC_COMM_SELF, MOFEM_INVALID_DATA,
            "The algorithm failed to compute eigenvalues.");
 
  delete[] work;
  MoFEMFunctionReturn(0);
}

computeEigenValuesSymmetric() [5/6]

template<int DIM>

DEPRECATED MoFEMErrorCode MoFEM::computeEigenValuesSymmetric	(	FTensor::Tensor2< double, DIM, DIM > &	eigen_vec,
		FTensor::Tensor1< double, DIM > &	eig
	)

Deprecated:

do not use, is kept for backward compatibility

Definition at line 1457 of file Templates.hpp.

                                                              {
  return computeEigenValuesSymmetric<DIM, double, double>(eigen_vec, eig);
}

computeEigenValuesSymmetric() [6/6]

template<int DIM, typename T1 , typename T2 >

MoFEMErrorCode MoFEM::computeEigenValuesSymmetric ( FTensor::Tensor2< T1, DIM, DIM > &  eigen_vec, FTensor::Tensor1< T2, DIM > &  eig  )

inline

compute eigenvalues of a symmetric matrix using lapack dsyev

Template Parameters

DIM

Parameters

eigen_vec	input / output DIM x DIM matrix of row eigen vectors
eig	output eigen values sorted

Returns

MoFEMErrorCode

Definition at line 1412 of file Templates.hpp.

                                                          {
  MoFEMFunctionBegin;
 
  const int n = DIM;
  const int lda = DIM;
  const int lwork = (DIM + 2) * DIM;
  std::array<double, (DIM + 2) * DIM> work;
 
  if (lapack_dsyev('V', 'U', n, &eigen_vec(0, 0), lda, &eig(0), work.data(),
                   lwork) > 0)
    SETERRQ(PETSC_COMM_SELF, MOFEM_INVALID_DATA,
            "The algorithm failed to compute eigenvalues.");
  MoFEMFunctionReturn(0);
}

computeMatrixInverse()

MoFEMErrorCode MoFEM::computeMatrixInverse ( MatrixDouble &  mat )

inline

compute matrix inverse with lapack dgetri

Parameters

mat	input square matrix / output inverse matrix

Returns

MoFEMErrorCode

Definition at line 1284 of file Templates.hpp.

                                                              {
  MoFEMFunctionBegin;
 
  const size_t M = mat.size1();
  const size_t N = mat.size2();
 
  if (M != N)
    SETERRQ2(PETSC_COMM_SELF, MOFEM_DATA_INCONSISTENCY,
             "The input matrix for inverse computation is not square %d != %d",
             M, N);
 
  int *ipv = new int[N];
  int lwork = N * N;
  double *work = new double[lwork];
  int info;
  info = lapack_dgetrf(N, N, &*mat.data().begin(), N, ipv);
  if (info != 0)
    SETERRQ1(PETSC_COMM_SELF, MOFEM_DATA_INCONSISTENCY,
             "lapack error info = %d", info);
  info = lapack_dgetri(N, &*mat.data().begin(), N, ipv, work, lwork);
  if (info != 0)
    SETERRQ1(PETSC_COMM_SELF, MOFEM_DATA_INCONSISTENCY,
             "lapack error info = %d", info);
 
  delete[] ipv;
  delete[] work;
 
  MoFEMFunctionReturn(0);
}

constructor_data()

static void MoFEM::constructor_data ( EntitiesFieldData *  data, const EntityType  type  )

static

Definition at line 42 of file EntitiesFieldData.cpp.

                                                                             {
 
  using EntData = EntitiesFieldData::EntData;
 
  auto set_default = [&]() {
    std::array<size_t, MBMAXTYPE> count;
    std::fill(count.begin(), count.end(), 0);
    const int dim_type = moab::CN::Dimension(type);
    data->dataOnEntities[MBVERTEX].resize(1);
    if (type != MBVERTEX) {
      for (auto dd = dim_type; dd > 0; --dd) {
        int nb_ents = moab::CN::NumSubEntities(type, dd);
        for (int ii = 0; ii != nb_ents; ++ii) {
          auto sub_ent_type = moab::CN::SubEntityType(type, dd, ii);
          count[sub_ent_type] = nb_ents;
        }
        for (auto tt = moab::CN::TypeDimensionMap[dd].first;
             tt <= moab::CN::TypeDimensionMap[dd].second; ++tt) {
          data->dataOnEntities[tt].resize(count[tt]);
        }
      }
    }
  };
 
  switch (type) {
  case MBENTITYSET:
    break;
 
  default:
    set_default();
  }
}

constructor_derived_data()

static void MoFEM::constructor_derived_data ( DerivedEntitiesFieldData *  derived_data, const boost::shared_ptr< EntitiesFieldData > &  data_ptr  )

static

Definition at line 86 of file EntitiesFieldData.cpp.

                                                                             {
 
  using EntData = EntitiesFieldData::EntData;
  using DerivedEntData = DerivedEntitiesFieldData::DerivedEntData;
 
  for (int tt = MBVERTEX; tt != MBMAXTYPE; ++tt) {
    auto &ent_data = data_ptr->dataOnEntities[tt];
    auto &derived_ent_data = derived_data->dataOnEntities[tt];
    for (auto c = derived_ent_data.size(); c < ent_data.size(); ++c) {
      boost::shared_ptr<EntData> ent_data_ptr(data_ptr, &ent_data[c]);
      derived_ent_data.push_back(new DerivedEntData(ent_data_ptr));
    }
    derived_ent_data.resize(ent_data.size());
  }
}

createAOMapping()

auto MoFEM::createAOMapping ( MPI_Comm  comm, PetscInt  napp, const PetscInt  myapp[], const PetscInt  mypetsc[]  )

inline

Creates an application mapping using two integer arrays.

AOCreateMappingIS.

Parameters

comm	MPI communicator that is to share the AO
napp	size of integer arrays
myapp	integer array that defines an ordering
mypetsc	integer array that defines another ordering (may be NULL to indicate the identity ordering)

Returns

SmartPetscObj<AO>(ao);

Definition at line 322 of file PetscSmartObj.hpp.

                                                                              {
  AO ao;
  CHK_THROW_MESSAGE(AOCreateMapping(comm, napp, myapp, mypetsc, &ao),
                    "create ao");
  return SmartPetscObj<AO>(ao);
}

createAOMappingIS()

auto MoFEM::createAOMappingIS ( IS  isapp, IS  ispetsc  )

inline

Creates an application mapping using two index sets.

AOCreateMappingIS.

Parameters

isapp	index set that defines an ordering
ispetsc	index set that defines another ordering, maybe NULL for identity
aoout	the new application ordering

Returns

SmartPetscObj<AO>(ao)

Definition at line 302 of file PetscSmartObj.hpp.

                                                    {
  AO ao;
  CHK_THROW_MESSAGE(AOCreateMappingIS(isapp, ispetsc, &ao),
                    "Failed to create AO");
  return SmartPetscObj<AO>(ao);
};

createDM()

auto MoFEM::createDM ( MPI_Comm  comm, const std::string  dm_type_name  )

inline

Creates smart DM object.

DM object can be used as any other object, but is destroyed as smart pointer when no longer used.

CHKERR DMRegister_MoFEM("MOFEM")
{
   auto dm = createDM(PETSC_COMM_WORLD, "MOFEM");
 
   // ...
 
   // dm is automatically destroyed when program goes out of the scope
}

Definition at line 137 of file PetscSmartObj.hpp.

                                                                  {
  DM dm;
  CHK_THROW_MESSAGE(DMCreate(comm, &dm), "Failed to create DM");
  CHK_THROW_MESSAGE(DMSetType(dm, dm_type_name.c_str()), "Failed set DM type");
  return SmartPetscObj<DM>(dm);
};

createGhostVector()

auto MoFEM::createGhostVector ( MPI_Comm  comm, PetscInt  n, PetscInt  N, PetscInt  nghost, const PetscInt  ghosts[]  )

inline

Create smart ghost vector.

For details abut arguments see here: VecCreateGhost.

auto vec = createGhostVector(...);

Definition at line 175 of file PetscSmartObj.hpp.

                                                                        {
  Vec vv;
  CHK_THROW_MESSAGE(VecCreateGhost(comm, n, N, nghost, ghosts, &vv),
                    "Failed to create ghosted Vec");
  return SmartPetscObj<Vec>(vv);
};

createISGeneral()

auto MoFEM::createISGeneral ( MPI_Comm  comm, PetscInt  n, const PetscInt  idx[], PetscCopyMode  mode  )

inline

Creates a data structure for an index set containing a list of integers.

AOCreateMappingIS.

Parameters

comm	the MPI communicator
n	the length of the index set
idx	the list of integers
mode	PETSC_COPY_VALUES, PETSC_OWN_POINTER, or PETSC_USE_POINTER; see PetscCopyMode for meaning of this flag.

Returns

SmartPetscObj<IS>(is)

Definition at line 283 of file PetscSmartObj.hpp.

                                                {
  IS is;
  CHK_THROW_MESSAGE(ISCreateGeneral(comm, n, idx, mode, &is), "Create IS");
  return SmartPetscObj<IS>(is);
}

createKSP()

auto MoFEM::createKSP ( MPI_Comm  comm )

inline

Examples

level_set.cpp.

Definition at line 257 of file PetscSmartObj.hpp.

                                     {
  KSP ksp;
  CHK_THROW_MESSAGE(KSPCreate(comm, &ksp), "Failed to create KSP");
  return SmartPetscObj<KSP>(ksp);
};

createPC()

auto MoFEM::createPC ( MPI_Comm  comm )

inline

Definition at line 263 of file PetscSmartObj.hpp.

                                    {
  PC pc;
  CHK_THROW_MESSAGE(PCCreate(comm, &pc), "Failed to create PC");
  return SmartPetscObj<PC>(pc);
};

createSmartDM()

DEPRECATED auto MoFEM::createSmartDM ( MPI_Comm  comm, const std::string  dm_type_name  )

inline

Deprecated:

use createDM

Definition at line 145 of file PetscSmartObj.hpp.

                                                                   {
  return createDM(comm, dm_type_name);
}

createSmartGhostVector()

DEPRECATED auto MoFEM::createSmartGhostVector ( MPI_Comm  comm, PetscInt  n, PetscInt  N, PetscInt  nghost, const PetscInt  ghosts[]  )

inline

Deprecated:

use createGhostVector

Definition at line 184 of file PetscSmartObj.hpp.

                                                                       {
  return createGhostVector(comm, n, N, nghost, ghosts);
}

createSmartVectorMPI()

DEPRECATED auto MoFEM::createSmartVectorMPI ( MPI_Comm  comm, PetscInt  n, PetscInt  N  )

inline

Deprecated:

use createVectorMPI

Definition at line 205 of file PetscSmartObj.hpp.

                                                        {
  return createVectorMPI(comm, n, N);
}

createSNES()

auto MoFEM::createSNES ( MPI_Comm  comm )

inline

Examples

mortar_contact.cpp, mortar_contact_thermal.cpp, simple_contact.cpp, simple_contact_thermal.cpp, and test_jacobian_of_simple_contact_element.cpp.

Definition at line 251 of file PetscSmartObj.hpp.

                                      {
  SNES snes;
  CHK_THROW_MESSAGE(SNESCreate(comm, &snes), "Failed to create SNES");
  return SmartPetscObj<SNES>(snes);
};

createTS()

auto MoFEM::createTS ( MPI_Comm  comm )

inline

Definition at line 245 of file PetscSmartObj.hpp.

                                    {
  TS ts;
  CHK_THROW_MESSAGE(TSCreate(comm, &ts), "Failed to create TS");
  return SmartPetscObj<TS>(ts);
};

createVecScatter()

auto MoFEM::createVecScatter ( Vec  x, IS  ix, Vec  y, IS  iy  )

inline

Create a Vec Scatter object.

VecScatterCreate.

Parameters

x	a vector that defines the shape (parallel data layout of the vector) of vectors from which we scatter
ix	the indices of xin to scatter (if NULL scatters all values)
y	a vector that defines the shape (parallel data layout of the vector) of vectors to which we scatter
iy	the indices of yin to hold results (if NULL fills entire vector yin in order)

Returns

Definition at line 345 of file PetscSmartObj.hpp.

                                                         {
  VecScatter s;
  CHK_THROW_MESSAGE(VecScatterCreate(x, ix, y, iy, &s), "create scatter");
  return SmartPetscObj<VecScatter>(s);
}

createVectorMPI()

auto MoFEM::createVectorMPI ( MPI_Comm  comm, PetscInt  n, PetscInt  N  )

inline

Create MPI Vector.

For details abut arguments see here: VecCreateMPI.

Definition at line 198 of file PetscSmartObj.hpp.

                                                                   {
  Vec vv;
  CHK_THROW_MESSAGE(VecCreateMPI(comm, n, N, &vv), "Failed to create Vec");
  return SmartPetscObj<Vec>(vv);
};

determinantTensor2by2()

template<class T1 , class T2 >

MoFEMErrorCode MoFEM::determinantTensor2by2 ( T1 &  t, T2 &  det  )

inline

Calculate determinant 2 by 2.

Definition at line 1534 of file Templates.hpp.

                                                            {
  MoFEMFunctionBeginHot;
  det = t(0, 0) * t(1, 1) - t(0, 1) * t(1, 0);
  MoFEMFunctionReturnHot(0);
}

determinantTensor3by3() [1/2]

template<typename T >

static auto MoFEM::determinantTensor3by3 ( T &  t )

inlinestatic

Calculate the determinant of a 3x3 matrix or a tensor of rank 2.

Template Parameters

T

Parameters

t

Returns

double

Definition at line 1493 of file Templates.hpp.

                                                                     {
  return t(0, 0) * t(1, 1) * t(2, 2) + t(1, 0) * t(2, 1) * t(0, 2) +
         t(2, 0) * t(0, 1) * t(1, 2) - t(0, 0) * t(2, 1) * t(1, 2) -
         t(2, 0) * t(1, 1) * t(0, 2) - t(1, 0) * t(0, 1) * t(2, 2);
}

determinantTensor3by3() [2/2]

template<class T1 , class T2 >

MoFEMErrorCode MoFEM::determinantTensor3by3 ( T1 &  t, T2 &  det  )

inline

Calculate determinant 3 by 3.

Definition at line 1523 of file Templates.hpp.

                                                            {
  MoFEMFunctionBeginHot;
  det = determinantTensor3by3(t);
  MoFEMFunctionReturnHot(0);
}

dimension_from_handle()

auto MoFEM::dimension_from_handle ( const EntityHandle  h )

inline

get entity dimension form handle

Definition at line 1795 of file Templates.hpp.

                                                        {
  return moab::CN::Dimension(type_from_handle(h));
};

DMMoFEMAddSubFieldCol()

PetscErrorCode MoFEM::DMMoFEMAddSubFieldCol	(	DM	dm,
		const char	field_name[],
		boost::shared_ptr< Range >	r_ptr
	)

Add field to sub dm problem on columns.

Parameters

dm
field_name
range	of entities

Returns

PetscErrorCode

Definition at line 291 of file DMMoFEM.cpp.

                                                                   {
  PetscValidHeaderSpecific(dm, DM_CLASSID, 1);
  MoFEMFunctionBeginHot;
  DMCtx *dm_field = static_cast<DMCtx *>(dm->data);
  if (!dm->data) {
    SETERRQ(PETSC_COMM_SELF, MOFEM_NOT_IMPLEMENTED,
            "data structure for MoFEM not yet created");
  }
  if (!dm_field->isSubDM) {
    SETERRQ(PETSC_COMM_SELF, MOFEM_DATA_INCONSISTENCY, "this is not sub-dm");
  }
  dm_field->colFields.push_back(field_name);
  dm_field->mapTypeCol[field_name] = r_ptr;
  MoFEMFunctionReturnHot(0);
}

DMMoFEMDuplicateDMCtx()

PetscErrorCode MoFEM::DMMoFEMDuplicateDMCtx	(	DM	dm,
		DM	dm_duplicate
	)

Duplicate internal data struture.

Parameters

dm
dm_duplicate

Returns

PetscErrorCode

Definition at line 184 of file DMMoFEM.cpp.

                                                             {
  MoFEMFunctionBegin;
 
  if (!dm->data)
    SETERRQ(PETSC_COMM_SELF, MOFEM_DATA_INCONSISTENCY,
            "data structure for MoFEM not yet created");
 
  if (static_cast<DMCtx *>(dm_duplicate->data)->referenceNumber == 0)
    delete static_cast<DMCtx *>(dm_duplicate->data);
 
  dm_duplicate->data = dm->data;
  ++(static_cast<DMCtx *>(dm_duplicate->data)->referenceNumber);
 
  MoFEMFunctionReturn(0);
}

DMMoFEMGetDestroyProblem()

PetscErrorCode MoFEM::DMMoFEMGetDestroyProblem	(	DM	dm,
		PetscBool *	destroy_problem
	)

Get if problem will be destroyed with DM

Parameters

dm	the DM object
destroy	return if PETSC_TRUE problem is destroyed

Returns

error code

Definition at line 433 of file DMMoFEM.cpp.

                                                                           {
  MoFEMFunctionBeginHot;
  PetscValidHeaderSpecific(dm, DM_CLASSID, 1);
  MoFEMFunctionBeginHot;
  DMCtx *dm_field = static_cast<DMCtx *>(dm->data);
  *destroy_problem = dm_field->destroyProblem;
  MoFEMFunctionReturnHot(0);
}

DMMoFEMGetSubColIS()

PetscErrorCode MoFEM::DMMoFEMGetSubColIS	(	DM	dm,
		IS *	is
	)

get sub problem is

Parameters

dm	has to be created with DMMoFEMSetSquareProblem
is	return is on the row

Returns

error code

Returns IS with global indices of the DM used to create SubDM

Definition at line 335 of file DMMoFEM.cpp.

                                                 {
  MoFEMFunctionBegin;
  PetscValidHeaderSpecific(dm, DM_CLASSID, 1);
  MoFEMFunctionBeginHot;
  DMCtx *dm_field = static_cast<DMCtx *>(dm->data);
  if (dm_field->isSubDM != PETSC_TRUE) {
    SETERRQ(PETSC_COMM_SELF, MOFEM_NOT_IMPLEMENTED,
            "This DM is not created as a SubDM");
  }
  if (dm_field->isProblemBuild != PETSC_TRUE) {
    SETERRQ(PETSC_COMM_SELF, MOFEM_NOT_IMPLEMENTED, "Problem is not build");
  }
  boost::shared_ptr<Problem::SubProblemData> sub_data =
      dm_field->problemPtr->getSubData();
  CHKERR sub_data->getColIs(is);
  MoFEMFunctionReturn(0);
}

DMMoFEMGetSubRowIS()

PetscErrorCode MoFEM::DMMoFEMGetSubRowIS	(	DM	dm,
		IS *	is
	)

get sub problem is

Parameters

dm	has to be created with DMMoFEMSetSquareProblem
is	return is on the row

Returns

error code

Returns IS with global indices of the DM used to create SubDM

Definition at line 317 of file DMMoFEM.cpp.

                                                 {
  MoFEMFunctionBegin;
  PetscValidHeaderSpecific(dm, DM_CLASSID, 1);
  MoFEMFunctionBeginHot;
  DMCtx *dm_field = static_cast<DMCtx *>(dm->data);
  if (dm_field->isSubDM != PETSC_TRUE) {
    SETERRQ(PETSC_COMM_SELF, MOFEM_NOT_IMPLEMENTED,
            "This DM is not created as a SubDM");
  }
  if (dm_field->isProblemBuild != PETSC_TRUE) {
    SETERRQ(PETSC_COMM_SELF, MOFEM_NOT_IMPLEMENTED, "Problem is not build");
  }
  boost::shared_ptr<Problem::SubProblemData> sub_data =
      dm_field->problemPtr->getSubData();
  CHKERR sub_data->getRowIs(is);
  MoFEMFunctionReturn(0);
}

DMMoFEMKSPSetComputeOperators()

template<class S , class T0 , class T1 , class T2 >

static PetscErrorCode MoFEM::DMMoFEMKSPSetComputeOperators ( DM  dm, S  fe_name, T0  method, T1  pre_only, T2  post_only  )

static

Definition at line 645 of file DMMoFEM.cpp.

                                                                               {
  PetscValidHeaderSpecific(dm, DM_CLASSID, 1);
  MoFEMFunctionBegin;
  DMCtx *dm_field = static_cast<DMCtx *>(dm->data);
  if (pre_only) {
    dm_field->kspCtx->getPreProcSetOperators().push_back(pre_only);
  }
  if (method) {
    dm_field->kspCtx->getSetOperators().push_back(
        PairNameFEMethodPtr(fe_name, method));
  }
  if (post_only) {
    dm_field->kspCtx->getPostProcSetOperators().push_back(post_only);
  }
  CHKERR DMKSPSetComputeOperators(dm, KspMat, dm_field->kspCtx.get());
  MoFEMFunctionReturn(0);
}

DMMoFEMKSPSetComputeRHS()

template<class S , class T0 , class T1 , class T2 >

static PetscErrorCode MoFEM::DMMoFEMKSPSetComputeRHS ( DM  dm, S  fe_name, T0  method, T1  pre_only, T2  post_only  )

static

Definition at line 604 of file DMMoFEM.cpp.

                                                                         {
  PetscValidHeaderSpecific(dm, DM_CLASSID, 1);
  MoFEMFunctionBegin;
  DMCtx *dm_field = static_cast<DMCtx *>(dm->data);
  if (pre_only) {
    dm_field->kspCtx->getPreProcComputeRhs().push_back(pre_only);
  }
  if (method) {
    dm_field->kspCtx->getComputeRhs().push_back(
        PairNameFEMethodPtr(fe_name, method));
  }
  if (post_only) {
    dm_field->kspCtx->getPostProcComputeRhs().push_back(post_only);
  }
  CHKERR DMKSPSetComputeRHS(dm, KspRhs, dm_field->kspCtx.get());
  MoFEMFunctionReturn(0);
}

DMMoFEMSetDestroyProblem()

PetscErrorCode MoFEM::DMMoFEMSetDestroyProblem	(	DM	dm,
		PetscBool	destroy_problem
	)

If this is set to PETSC_TRUE problem is deleted with DM

Parameters

dm	the DM object
destroy	if PETSC_TRUE problem is destroyed

Returns

error code

Definition at line 424 of file DMMoFEM.cpp.

                                                                          {
  MoFEMFunctionBeginHot;
  PetscValidHeaderSpecific(dm, DM_CLASSID, 1);
  MoFEMFunctionBeginHot;
  DMCtx *dm_field = static_cast<DMCtx *>(dm->data);
  dm_field->destroyProblem = destroy_problem;
  MoFEMFunctionReturnHot(0);
}

DMMoFEMSetVerbosity()

PetscErrorCode MoFEM::DMMoFEMSetVerbosity	(	DM	dm,
		const int	verb
	)

Set verbosity level.

Parameters

dm
verb	see VERBOSITY_LEVELS for list of the levels

Returns

PetscErrorCode

Definition at line 1489 of file DMMoFEM.cpp.

                                                          {
  PetscValidHeaderSpecific(dm, DM_CLASSID, 1);
  MoFEMFunctionBeginHot;
  DMCtx *dm_field = static_cast<DMCtx *>(dm->data);
  dm_field->verbosity = verb;
  MoFEMFunctionReturnHot(0);
}

DMMoFEMSNESSetFunction()

template<class S , class T0 , class T1 , class T2 >

static PetscErrorCode MoFEM::DMMoFEMSNESSetFunction ( DM  dm, S  fe_name, T0  method, T1  pre_only, T2  post_only  )

static

Definition at line 685 of file DMMoFEM.cpp.

                                                                        {
  PetscValidHeaderSpecific(dm, DM_CLASSID, 1);
  MoFEMFunctionBegin;
  DMCtx *dm_field = static_cast<DMCtx *>(dm->data);
  if (pre_only) {
    dm_field->snesCtx->getPreProcComputeRhs().push_back(pre_only);
  }
  if (method) {
    dm_field->snesCtx->getComputeRhs().push_back(
        PairNameFEMethodPtr(fe_name, method));
  }
  if (post_only) {
    dm_field->snesCtx->getPostProcComputeRhs().push_back(post_only);
  }
  CHKERR DMSNESSetFunction(dm, SnesRhs, dm_field->snesCtx.get());
  MoFEMFunctionReturn(0);
}

DMMoFEMSNESSetJacobian()

template<class S , class T0 , class T1 , class T2 >

static PetscErrorCode MoFEM::DMMoFEMSNESSetJacobian ( DM  dm, S  fe_name, T0  method, T1  pre_only, T2  post_only  )

static

Definition at line 726 of file DMMoFEM.cpp.

                                                                        {
  PetscValidHeaderSpecific(dm, DM_CLASSID, 1);
  MoFEMFunctionBegin;
  DMCtx *dm_field = static_cast<DMCtx *>(dm->data);
  if (pre_only) {
    dm_field->snesCtx->getPreProcSetOperators().push_back(pre_only);
  }
  if (method) {
    dm_field->snesCtx->getSetOperators().push_back(
        PairNameFEMethodPtr(fe_name, method));
  }
  if (post_only) {
    dm_field->snesCtx->getPostProcSetOperators().push_back(post_only);
  }
  CHKERR DMSNESSetJacobian(dm, SnesMat, dm_field->snesCtx.get());
  MoFEMFunctionReturn(0);
}

DMMoFEMSwapDMCtx()

PetscErrorCode MoFEM::DMMoFEMSwapDMCtx	(	DM	dm,
		DM	dm_swap
	)

Swap internal data struture.

Parameters

dm
dm_swap

Returns

PetscErrorCode

Definition at line 200 of file DMMoFEM.cpp.

                                                   {
  MoFEMFunctionBegin;
  if (!dm->data)
    SETERRQ(PETSC_COMM_SELF, MOFEM_DATA_INCONSISTENCY,
            "data structure for MoFEM not yet created on dm");
  if (!dm_swap->data)
    SETERRQ(PETSC_COMM_SELF, MOFEM_DATA_INCONSISTENCY,
            "data structure for MoFEM not yet created on swap dm");
 
  auto *dm_field = static_cast<DMCtx *>(dm->data);
  auto *dm_field_swap = static_cast<DMCtx *>(dm_swap->data);
 
  auto tmp_field = dm_field;
  dm_field = dm_field_swap;
  dm_field_swap = tmp_field;
 
  MoFEMFunctionReturn(0);
}

DMMoFEMTSSetI2Function()

template<class S , class T0 , class T1 , class T2 >

static PetscErrorCode MoFEM::DMMoFEMTSSetI2Function ( DM  dm, S  fe_name, T0  method, T1  pre_only, T2  post_only  )

static

Definition at line 931 of file DMMoFEM.cpp.

                                                                        {
  PetscValidHeaderSpecific(dm, DM_CLASSID, 1);
  MoFEMFunctionBegin;
  DMCtx *dm_field = static_cast<DMCtx *>(dm->data);
  if (pre_only) {
    dm_field->tsCtx->getPreProcessIFunction().push_back(pre_only);
  }
  if (method) {
    dm_field->tsCtx->getLoopsIFunction().push_back(
        PairNameFEMethodPtr(fe_name, method));
  }
  if (post_only) {
    dm_field->tsCtx->getPostProcessIFunction().push_back(post_only);
  }
  CHKERR DMTSSetI2Function(dm, TsSetI2Function, dm_field->tsCtx.get());
  MoFEMFunctionReturn(0);
}

DMMoFEMTSSetI2Jacobian()

template<class S , class T0 , class T1 , class T2 >

static PetscErrorCode MoFEM::DMMoFEMTSSetI2Jacobian ( DM  dm, S  fe_name, T0  method, T1  pre_only, T2  post_only  )

static

Definition at line 974 of file DMMoFEM.cpp.

                                                                        {
  PetscValidHeaderSpecific(dm, DM_CLASSID, 1);
  MoFEMFunctionBegin;
  DMCtx *dm_field = static_cast<DMCtx *>(dm->data);
  if (pre_only) {
    dm_field->tsCtx->getPreProcessIJacobian().push_back(pre_only);
  }
  if (method) {
    dm_field->tsCtx->getLoopsIJacobian().push_back(
        PairNameFEMethodPtr(fe_name, method));
  }
  if (post_only) {
    dm_field->tsCtx->getPostProcessIJacobian().push_back(post_only);
  }
  CHKERR DMTSSetI2Jacobian(dm, TsSetI2Jacobian, dm_field->tsCtx.get());
  MoFEMFunctionReturn(0);
}

DMMoFEMTSSetIFunction()

template<class S , class T0 , class T1 , class T2 >

static PetscErrorCode MoFEM::DMMoFEMTSSetIFunction ( DM  dm, S  fe_name, T0  method, T1  pre_only, T2  post_only  )

static

Definition at line 767 of file DMMoFEM.cpp.

                                                                       {
  PetscValidHeaderSpecific(dm, DM_CLASSID, 1);
  MoFEMFunctionBegin;
  DMCtx *dm_field = static_cast<DMCtx *>(dm->data);
  if (pre_only) {
    dm_field->tsCtx->getPreProcessIFunction().push_back(pre_only);
  }
  if (method) {
    dm_field->tsCtx->getLoopsIFunction().push_back(
        PairNameFEMethodPtr(fe_name, method));
  }
  if (post_only) {
    dm_field->tsCtx->getPostProcessIFunction().push_back(post_only);
  }
  CHKERR DMTSSetIFunction(dm, TsSetIFunction, dm_field->tsCtx.get());
  MoFEMFunctionReturn(0);
}

DMMoFEMTSSetIJacobian()

template<class S , class T0 , class T1 , class T2 >

static PetscErrorCode MoFEM::DMMoFEMTSSetIJacobian ( DM  dm, S  fe_name, T0  method, T1  pre_only, T2  post_only  )

static

Definition at line 810 of file DMMoFEM.cpp.

                                                                       {
  PetscValidHeaderSpecific(dm, DM_CLASSID, 1);
  MoFEMFunctionBegin;
  DMCtx *dm_field = static_cast<DMCtx *>(dm->data);
  if (pre_only) {
    dm_field->tsCtx->getPreProcessIJacobian().push_back(pre_only);
  }
  if (method) {
    dm_field->tsCtx->getLoopsIJacobian().push_back(
        PairNameFEMethodPtr(fe_name, method));
  }
  if (post_only) {
    dm_field->tsCtx->getPostProcessIJacobian().push_back(post_only);
  }
  CHKERR DMTSSetIJacobian(dm, TsSetIJacobian, dm_field->tsCtx.get());
  MoFEMFunctionReturn(0);
}

DMMoFEMTSSetMonitor() [1/3]

PetscErrorCode MoFEM::DMMoFEMTSSetMonitor	(	DM	dm,
		TS	ts,
		const char	fe_name[],
		MoFEM::FEMethod *	method,
		MoFEM::BasicMethod *	pre_only,
		MoFEM::BasicMethod *	post_only
	)

Set Monitor To TS solver.

See PETSc documentaton here

Parameters

dm
ts	time solver
fe_name
method
pre_only
post_only

Returns

PetscErrorCod

Definition at line 1031 of file DMMoFEM.cpp.

                                                                {
  return DMMoFEMTSSetMonitor<const char *, MoFEM::FEMethod *,
                             MoFEM::BasicMethod *, MoFEM::BasicMethod *>(
      dm, ts, fe_name, method, pre_only, post_only);
  MoFEMFunctionReturnHot(0);
}

DMMoFEMTSSetMonitor() [2/3]

PetscErrorCode MoFEM::DMMoFEMTSSetMonitor	(	DM	dm,
		TS	ts,
		const std::string	fe_name,
		boost::shared_ptr< MoFEM::FEMethod >	method,
		boost::shared_ptr< MoFEM::BasicMethod >	pre_only,
		boost::shared_ptr< MoFEM::BasicMethod >	post_only
	)

Set Monitor To TS solver.

See PETSc documentaton here

Parameters

dm
ts	time solver
fe_name
method
pre_only
post_only

Returns

PetscErrorCod

Definition at line 1042 of file DMMoFEM.cpp.

                                                                 {
  return DMMoFEMTSSetMonitor<const std::string,
                             boost::shared_ptr<MoFEM::FEMethod>,
                             boost::shared_ptr<MoFEM::BasicMethod>,
                             boost::shared_ptr<MoFEM::BasicMethod>>(
      dm, ts, fe_name, method, pre_only, post_only);
  MoFEMFunctionReturnHot(0);
}

DMMoFEMTSSetMonitor() [3/3]

template<class S , class T0 , class T1 , class T2 >

static PetscErrorCode MoFEM::DMMoFEMTSSetMonitor ( DM  dm, TS  ts, S  fe_name, T0  method, T1  pre_only, T2  post_only  )

static

Definition at line 1015 of file DMMoFEM.cpp.

                                                                     {
  PetscValidHeaderSpecific(dm, DM_CLASSID, 1);
  MoFEMFunctionBegin;
  DMCtx *dm_field = static_cast<DMCtx *>(dm->data);
  if (pre_only)
    dm_field->tsCtx->getPreProcessMonitor().push_back(pre_only);
  if (method)
    dm_field->tsCtx->getLoopsMonitor().push_back(
        PairNameFEMethodPtr(fe_name, method));
  if (post_only)
    dm_field->tsCtx->getPostProcessMonitor().push_back(post_only);
  CHKERR TSMonitorSet(ts, TsMonitorSet, dm_field->tsCtx.get(), PETSC_NULL);
  MoFEMFunctionReturn(0);
}

DMMoFEMTSSetRHSFunction() [1/3]

PetscErrorCode MoFEM::DMMoFEMTSSetRHSFunction	(	DM	dm,
		const char	fe_name[],
		MoFEM::FEMethod *	method,
		MoFEM::BasicMethod *	pre_only,
		MoFEM::BasicMethod *	post_only
	)

Definition at line 880 of file DMMoFEM.cpp.

                                                                    {
  return DMMoFEMTSSetRHSFunction<const char *, MoFEM::FEMethod *,
                                 MoFEM::BasicMethod *, MoFEM::BasicMethod *>(
      dm, fe_name, method, pre_only, post_only);
  MoFEMFunctionReturnHot(0);
}

DMMoFEMTSSetRHSFunction() [2/3]

PetscErrorCode MoFEM::DMMoFEMTSSetRHSFunction	(	DM	dm,
		const std::string	fe_name,
		boost::shared_ptr< MoFEM::FEMethod >	method,
		boost::shared_ptr< MoFEM::BasicMethod >	pre_only,
		boost::shared_ptr< MoFEM::BasicMethod >	post_only
	)

set TS the right hand side function

See petsc documentation

Parameters

dm
fe_name
method
pre_only
post_only

Returns

PetscErrorCode

Definition at line 868 of file DMMoFEM.cpp.

                                                                     {
  return DMMoFEMTSSetRHSFunction<const std::string,
                                 boost::shared_ptr<MoFEM::FEMethod>,
                                 boost::shared_ptr<MoFEM::BasicMethod>,
                                 boost::shared_ptr<MoFEM::BasicMethod>>(
      dm, fe_name, method, pre_only, post_only);
  MoFEMFunctionReturnHot(0);
}

DMMoFEMTSSetRHSFunction() [3/3]

template<class S , class T0 , class T1 , class T2 >

static PetscErrorCode MoFEM::DMMoFEMTSSetRHSFunction ( DM  dm, S  fe_name, T0  method, T1  pre_only, T2  post_only  )

static

Definition at line 851 of file DMMoFEM.cpp.

                                                                         {
  PetscValidHeaderSpecific(dm, DM_CLASSID, 1);
  MoFEMFunctionBegin;
  DMCtx *dm_field = static_cast<DMCtx *>(dm->data);
  if (pre_only)
    dm_field->tsCtx->getPreProcessRHSFunction().push_back(pre_only);
  if (method)
    dm_field->tsCtx->getLoopsRHSFunction().push_back(
        PairNameFEMethodPtr(fe_name, method));
  if (post_only)
    dm_field->tsCtx->getPostProcessRHSFunction().push_back(post_only);
  CHKERR DMTSSetRHSFunction(dm, TsSetRHSFunction, dm_field->tsCtx.get());
  MoFEMFunctionReturn(0);
}

DMMoFEMTSSetRHSJacobian() [1/3]

PetscErrorCode MoFEM::DMMoFEMTSSetRHSJacobian	(	DM	dm,
		const char	fe_name[],
		MoFEM::FEMethod *	method,
		MoFEM::BasicMethod *	pre_only,
		MoFEM::BasicMethod *	post_only
	)

Definition at line 920 of file DMMoFEM.cpp.

                                                                    {
  return DMMoFEMTSSetRHSJacobian<const char *, MoFEM::FEMethod *,
                                 MoFEM::BasicMethod *, MoFEM::BasicMethod *>(
      dm, fe_name, method, pre_only, post_only);
  MoFEMFunctionReturnHot(0);
}

DMMoFEMTSSetRHSJacobian() [2/3]

PetscErrorCode MoFEM::DMMoFEMTSSetRHSJacobian	(	DM	dm,
		const std::string	fe_name,
		boost::shared_ptr< MoFEM::FEMethod >	method,
		boost::shared_ptr< MoFEM::BasicMethod >	pre_only,
		boost::shared_ptr< MoFEM::BasicMethod >	post_only
	)

set TS the right hand side jacobian

See petsc documentation

Parameters

dm
fe_name
method
pre_only
post_only

Returns

PetscErrorCode

Definition at line 908 of file DMMoFEM.cpp.

                                                                     {
  return DMMoFEMTSSetRHSJacobian<const std::string,
                                 boost::shared_ptr<MoFEM::FEMethod>,
                                 boost::shared_ptr<MoFEM::BasicMethod>,
                                 boost::shared_ptr<MoFEM::BasicMethod>>(
      dm, fe_name, method, pre_only, post_only);
  MoFEMFunctionReturnHot(0);
}

DMMoFEMTSSetRHSJacobian() [3/3]

template<class S , class T0 , class T1 , class T2 >

static PetscErrorCode MoFEM::DMMoFEMTSSetRHSJacobian ( DM  dm, S  fe_name, T0  method, T1  pre_only, T2  post_only  )

static

Definition at line 891 of file DMMoFEM.cpp.

                                                                         {
  PetscValidHeaderSpecific(dm, DM_CLASSID, 1);
  MoFEMFunctionBegin;
  DMCtx *dm_field = static_cast<DMCtx *>(dm->data);
  if (pre_only)
    dm_field->tsCtx->getPreProcessRHSFunction().push_back(pre_only);
  if (method)
    dm_field->tsCtx->getLoopsRHSFunction().push_back(
        PairNameFEMethodPtr(fe_name, method));
  if (post_only)
    dm_field->tsCtx->getPostProcessRHSFunction().push_back(post_only);
  CHKERR DMTSSetRHSJacobian(dm, TsSetRHSJacobian, dm_field->tsCtx.get());
  MoFEMFunctionReturn(0);
}

ent_form_type_and_id()

auto MoFEM::ent_form_type_and_id ( const EntityType  type, const EntityID  id  )

inline

get entity handle from type and id

Definition at line 1787 of file Templates.hpp.

                                                                           {
  return (static_cast<EntityHandle>(type) << MB_ID_WIDTH) | id;
};

field_bit_from_bit_number()

auto MoFEM::field_bit_from_bit_number ( const int  bit_number )

inline

get field bit id from bit number

Definition at line 1811 of file Templates.hpp.

                                                            {
  return BitFieldId().set(bit_number - 1);
};

get_cache_data_dofs_view()

template<typename ENTSVIEW , typename DOFSVIEW , typename EXTRACTOR , typename INSERTER >

static MoFEMErrorCode MoFEM::get_cache_data_dofs_view ( ENTSVIEW &  ents_view, DOFSVIEW &  dofs_view, EXTRACTOR &&  extractor, INSERTER &&  inserter  )

inlinestatic

Definition at line 496 of file FEMultiIndices.cpp.

                                                                     {
  MoFEMFunctionBeginHot;
 
  auto hint = dofs_view->end();
  using ValType = typename std::remove_reference<decltype(**hint)>::type;
 
  for (auto &it : *ents_view) {
    if (auto e = it.lock()) {
 
      if (auto cache = extractor(e).lock())
        for (auto dit = cache->loHi[0]; dit != cache->loHi[1]; ++dit)
          hint = inserter(dofs_view, hint,
                          boost::reinterpret_pointer_cast<ValType>(*dit));
      else
        SETERRQ(PETSC_COMM_SELF, MOFEM_DATA_INCONSISTENCY, "Cache not set");
    }
  }
 
  MoFEMFunctionReturnHot(0);
}

get_id_for_max_type() [1/2]

template<EntityType TYPE>

EntityHandle MoFEM::get_id_for_max_type ( )

inline

Definition at line 13 of file RefEntsMultiIndices.hpp.

                                                                     {
  return (static_cast<EntityHandle>(TYPE) << MB_ID_WIDTH) |
         (~static_cast<EntityHandle>(MB_TYPE_MASK));
};

get_id_for_max_type() [2/2]

EntityHandle MoFEM::get_id_for_max_type ( const EntityType  type )

inline

Definition at line 22 of file RefEntsMultiIndices.hpp.

                                                               {
  return (static_cast<EntityHandle>(type) << MB_ID_WIDTH) |
         (~static_cast<EntityHandle>(MB_TYPE_MASK));
};

get_id_for_min_type() [1/2]

template<EntityType TYPE>

EntityHandle MoFEM::get_id_for_min_type ( )

inline

Definition at line 18 of file RefEntsMultiIndices.hpp.

                                                                     {
  return (static_cast<EntityHandle>(TYPE) << MB_ID_WIDTH);
};

get_id_for_min_type() [2/2]

EntityHandle MoFEM::get_id_for_min_type ( const EntityType  type )

inline

Definition at line 27 of file RefEntsMultiIndices.hpp.

                                                               {
  return (static_cast<EntityHandle>(type) << MB_ID_WIDTH);
};

get_sub_iface_options_imp() [1/2]

template<class T >

static auto MoFEM::get_sub_iface_options_imp ( T *const  ptr, int    ) -> decltype(ptr->getSubInterfaceOptions())

static

Definition at line 138 of file Core.cpp.

                                               {
  return ptr->getSubInterfaceOptions();
};

get_sub_iface_options_imp() [2/2]

template<class T >

static auto MoFEM::get_sub_iface_options_imp ( T *const  ptr, long    ) -> MoFEMErrorCode

static

Definition at line 146 of file Core.cpp.

                                                                            {
  return 0;
};

get_tag_ptr()

void * MoFEM::get_tag_ptr ( moab::Interface &  moab, Tag  th, EntityHandle  ent, int *  tag_size  )

inline

Get the tag ptr object.

Parameters

moab
th
ent
tag_size

Returns

void*

Definition at line 40 of file RefEntsMultiIndices.hpp.

                                        {
  void *ret_val;
  rval = moab.tag_get_by_ptr(th, &ent, 1, (const void **)&ret_val, tag_size);
  if (rval != MB_SUCCESS) {
    if (tag_size)
      *tag_size = 0;
    return NULL;
  } else {
    return ret_val;
  }
}

get_temp_meshset_ptr()

auto MoFEM::get_temp_meshset_ptr ( moab::Interface &  moab )

inline

Create smart pointer to temporary meshset.

Definition at line 1767 of file Templates.hpp.

                                                      {
  return boost::make_shared<TempMeshset>(moab);
};

get_value()

template<class TYPE >

static MoFEMErrorCode MoFEM::get_value ( MatrixDouble &  pts_x, MatrixDouble &  pts_t, TYPE *  ctx  )

static

Definition at line 25 of file JacobiPolynomial.cpp.

                                           {
  MoFEMFunctionBeginHot;
  ctx->baseFunPtr->resize(pts_x.size2(), ctx->P + 1, false);
  ctx->baseDiffFunPtr->resize(pts_x.size2(), ctx->dIm * (ctx->P + 1), false);
  if (pts_x.size1() != pts_t.size1() || pts_x.size2() != pts_t.size2()) {
    SETERRQ(PETSC_COMM_SELF, MOFEM_DATA_INCONSISTENCY,
            "Inconsistent size of arguments");
  }
  double *l = NULL;
  double *diff_l = NULL;
  for (unsigned int gg = 0; gg < pts_x.size2(); gg++) {
    if (ctx->baseFunPtr)
      l = &((*ctx->baseFunPtr)(gg, 0));
    if (ctx->baseDiffFunPtr)
      diff_l = &((*ctx->baseDiffFunPtr)(gg, 0));
    ierr = (ctx->basePolynomialsType1)(ctx->P, ctx->aLpha, pts_x(0, gg),
                                       pts_t(0, gg), ctx->diffX, ctx->diffT, l,
                                       diff_l, ctx->dIm);
    CHKERRG(ierr);
  }
  MoFEMFunctionReturnHot(0);
}

getCommFromPetscObject()

MPI_Comm MoFEM::getCommFromPetscObject ( PetscObject  obj )

inline

Get the Comm From Petsc Object object.

Parameters

obj

Returns

MPI_Comm

Definition at line 156 of file PetscSmartObj.hpp.

                                                        {
  MPI_Comm comm;
  CHK_THROW_MESSAGE(PetscObjectGetComm(obj, &comm),
                    "Failed to get comm from PETSc object");
  return comm;
};

getDMKspCtx()

auto MoFEM::getDMKspCtx ( DM  dm )

inline

Get KSP context data structure used by DM.

Definition at line 1017 of file DMMoFEM.hpp.

                               {
  boost::shared_ptr<MoFEM::KspCtx> ksp_ctx;
  ierr = DMMoFEMGetKspCtx(dm, ksp_ctx);
  CHKERRABORT(getCommFromPetscObject(reinterpret_cast<PetscObject>(dm)), ierr);
  return ksp_ctx;
};

getDMSnesCtx()

auto MoFEM::getDMSnesCtx ( DM  dm )

inline

Get SNES context data structure used by DM.

Definition at line 1031 of file DMMoFEM.hpp.

                                {
  boost::shared_ptr<MoFEM::SnesCtx> snes_ctx;
  ierr = DMMoFEMGetSnesCtx(dm, snes_ctx);
  CHKERRABORT(getCommFromPetscObject(reinterpret_cast<PetscObject>(dm)), ierr);
  return snes_ctx;
};

getDMSubData()

auto MoFEM::getDMSubData ( DM  dm )

inline

Get sub problem data structure.

Parameters

dm

Returns

auto

Definition at line 1061 of file DMMoFEM.hpp.

                                {
  auto prb_ptr = getProblemPtr(dm);
  return prb_ptr->getSubData();
};

getDMTsCtx()

auto MoFEM::getDMTsCtx ( DM