calculate jump on entities More...

#include <users_modules/basic_finite_elements/mix_transport/src/MixTransportElement.hpp>

Inheritance diagram for MixTransport::MixTransportElement::OpSkeleton:

Collaboration diagram for MixTransport::MixTransportElement::OpSkeleton:

Classes
struct	OpVolSide
	calculate values on adjacent tetrahedra to face More...

Public Member Functions
	OpSkeleton (MixTransportElement &ctx, const std::string flux_name)

MoFEMErrorCode	doWork (int side, EntityType type, DataForcesAndSourcesCore::EntData &data)

Public Member Functions inherited from MoFEM::FaceElementForcesAndSourcesCore::UserDataOperator
	UserDataOperator (const FieldSpace space)

	UserDataOperator (const std::string &field_name, const char type)

	UserDataOperator (const std::string &row_field_name, const std::string &col_field_name, const char type, const bool symm=true)

double	getArea ()
	get area of face More...

double	getMeasure ()
	get measure of element More...

VectorDouble &	getNormal ()
	get triangle normal More...

VectorDouble &	getTangent1 ()
	get triangle tangent 1 More...

VectorDouble &	getTangent2 ()
	get triangle tangent 2 More...

auto	getFTensor1Normal ()
	get normal as tensor More...

DEPRECATED auto	getTensor1Normal ()

auto	getFTensor1Tangent1 ()
	get tangentOne as tensor More...

DEPRECATED auto	getTensor1Tangent1 ()

auto	getFTensor2Tangent1 ()
	get tangentTwo as tensor More...

DEPRECATED auto	getTensor2Tangent1 ()

int	getNumNodes ()
	get element number of nodes More...

const EntityHandle *	getConn ()
	get element connectivity More...

VectorDouble &	getCoords ()
	get triangle coordinates More...

auto	getFTensor1Coords ()
	get get coords at gauss points More...

DEPRECATED auto	getTensor1Coords ()

MatrixDouble &	getCoordsAtGaussPts ()
	Gauss points and weight, matrix (nb. of points x 3) More...

auto	getFTensor1CoordsAtGaussPts ()
	get coordinates at Gauss pts. More...

DEPRECATED auto	getTensor1CoordsAtGaussPts ()

MatrixDouble &	getHoCoordsAtGaussPts ()
	coordinate at Gauss points (if hierarchical approximation of element geometry) More...

auto	getFTensor1HoCoordsAtGaussPts ()
	get coordinates at Gauss pts (takes in account ho approx. of geometry) More...

DEPRECATED auto	getTensor1HoCoordsAtGaussPts ()

MatrixDouble &	getNormalsAtGaussPts ()
	if higher order geometry return normals at Gauss pts. More...

DEPRECATED MatrixDouble &	getNormalsAtGaussPt ()

ublas::matrix_row< MatrixDouble >	getNormalsAtGaussPts (const int gg)
	if higher order geometry return normals at Gauss pts. More...

DEPRECATED auto	getNormalsAtGaussPt (const int gg)

MatrixDouble &	getTangent1AtGaussPts ()
	if higher order geometry return tangent vector to triangle at Gauss pts. More...

DEPRECATED MatrixDouble &	getTangent1AtGaussPt ()

MatrixDouble &	getTangent2AtGaussPts ()
	if higher order geometry return tangent vector to triangle at Gauss pts. More...

DEPRECATED MatrixDouble &	getTangent2AtGaussPt ()

auto	getFTensor1NormalsAtGaussPts ()
	get normal at integration points More...

DEPRECATED auto	getTensor1NormalsAtGaussPt ()

auto	getFTensor1Tangent1AtGaussPts ()
	get tangent 1 at integration points More...

DEPRECATED auto	getTensor1Tangent1AtGaussPt ()

auto	getFTensor1Tangent2AtGaussPts ()
	get tangent 2 at integration points More...

DEPRECATED auto	getTensor1Tangent2AtGaussPt ()

DEPRECATED const FaceElementForcesAndSourcesCore *	getFaceElementForcesAndSourcesCore ()

DEPRECATED const FaceElementForcesAndSourcesCore *	getTriFE ()

const FaceElementForcesAndSourcesCore *	getFaceFE ()
	return pointer to Generic Triangle Finite Element object More...

MoFEMErrorCode	loopSideVolumes (const string &fe_name, VolumeElementForcesAndSourcesCoreOnSide &method)

Public Member Functions inherited from MoFEM::ForcesAndSourcesCore::UserDataOperator
	UserDataOperator (const FieldSpace space, const char type=OPLAST, const bool symm=true)

	UserDataOperator (const std::string &field_name, const char type, const bool symm=true)

	UserDataOperator (const std::string &row_field_name, const std::string &col_field_name, const char type, const bool symm=true)

virtual	~UserDataOperator ()

boost::shared_ptr< const NumeredEntFiniteElement >	getNumeredEntFiniteElementPtr () const
	Return raw pointer to NumeredEntFiniteElement. More...

EntityHandle	getFEEntityHandle () const
	Return finite element entity handle. More...

MoFEMErrorCode	getProblemRowIndices (const std::string filed_name, const EntityType type, const int side, VectorInt &indices) const
	Get row indices. More...

MoFEMErrorCode	getProblemColIndices (const std::string filed_name, const EntityType type, const int side, VectorInt &indices) const
	Get col indices. More...

virtual MoFEMErrorCode	setPtrFE (ForcesAndSourcesCore *ptr)

const FEMethod *	getFEMethod () const
	Return raw pointer to Finite Element Method object. More...

int	getOpType () const
	Get operator types. More...

void	setOpType (const OpType type)
	Set operator type. More...

void	addOpType (const OpType type)
	Add operator type. More...

int	getNinTheLoop () const
	get number of finite element in the loop More...

int	getLoopSize () const
	get size of elements in the loop More...

const std::string &	getFEName () const
	Get name of the element. More...

Vec	getSnesF () const

Vec	getSnesX () const

Mat	getSnesA () const

Mat	getSnesB () const

Vec	getTSu () const

Vec	getTSu_t () const

Vec	getTSf () const

Mat	getTSA () const

Mat	getTSB () const

int	getTSstep () const

double	getTStime () const

double	getTSa () const

MatrixDouble &	getGaussPts ()
	matrix of integration (Gauss) points for Volume Element More...

auto	getFTensor0IntegrationWeight ()
	Get integration weights. More...

DEPRECATED MoFEMErrorCode	getPorblemRowIndices (const std::string filed_name, const EntityType type, const int side, VectorInt &indices) const

DEPRECATED MoFEMErrorCode	getPorblemColIndices (const std::string filed_name, const EntityType type, const int side, VectorInt &indices) const

Public Member Functions inherited from MoFEM::DataOperator
	DataOperator (const bool symm=true, const bool do_vertices=true, const bool do_edges=true, const bool do_quads=true, const bool do_tris=true, const bool do_tets=true, const bool do_prisms=true)

virtual	~DataOperator ()

virtual MoFEMErrorCode	doWork (int row_side, int col_side, EntityType row_type, EntityType col_type, DataForcesAndSourcesCore::EntData &row_data, DataForcesAndSourcesCore::EntData &col_data)
	Operator for bi-linear form, usually to calculate values on left hand side. More...

virtual MoFEMErrorCode	opLhs (DataForcesAndSourcesCore &row_data, DataForcesAndSourcesCore &col_data, bool symm=true)

virtual MoFEMErrorCode	opLhs (DataForcesAndSourcesCore &row_data, DataForcesAndSourcesCore &col_data)

virtual MoFEMErrorCode	doWork (int side, EntityType type, DataForcesAndSourcesCore::EntData &data)
	Operator for linear form, usually to calculate values on right hand side. More...

virtual MoFEMErrorCode	opRhs (DataForcesAndSourcesCore &data, const bool do_vertices, const bool do_edges, const bool do_quads, const bool do_tris, const bool do_tets, const bool do_prisms, const bool error_if_no_base=true)

virtual MoFEMErrorCode	opRhs (DataForcesAndSourcesCore &data, const bool error_if_no_base=true)

bool	getSymm () const
	Get if operator uses symmetry of DOFs or not. More...

void	setSymm ()
	set if operator is executed taking in account symmetry More...

void	unSetSymm ()
	unset if operator is executed for non symmetric problem More...

Public Attributes
VolumeElementForcesAndSourcesCoreOnSide	volSideFe
	volume element to get values from adjacent tets to face More...

map< int, VectorDouble >	valMap

MixTransportElement &	cTx

Public Attributes inherited from MoFEM::ForcesAndSourcesCore::UserDataOperator
char	opType

std::string	rowFieldName

std::string	colFieldName

FieldSpace	sPace

Public Attributes inherited from MoFEM::DataOperator
bool	sYmm
	If true assume that matrix is symmetric structure. More...

bool	doVertices
	If false skip vertices. More...

bool	doEdges
	If false skip edges. More...

bool	doQuads

bool	doTris

bool	doTets

bool	doPrisms

Additional Inherited Members
Public Types inherited from MoFEM::ForcesAndSourcesCore::UserDataOperator
enum	OpType { OPROW = 1 << 0, OPCOL = 1 << 1, OPROWCOL = 1 << 2, OPLAST = 1 << 3 }
	Controls loop over entities on element. More...

Protected Attributes inherited from MoFEM::ForcesAndSourcesCore::UserDataOperator
ForcesAndSourcesCore *	ptrFE

Detailed Description

calculate jump on entities

Definition at line 1513 of file MixTransportElement.hpp.

Constructor & Destructor Documentation

◆ OpSkeleton()

MixTransport::MixTransportElement::OpSkeleton::OpSkeleton	(	MixTransportElement &	ctx,
		const std::string	flux_name
	)

Definition at line 1553 of file MixTransportElement.hpp.

         : MoFEM::FaceElementForcesAndSourcesCore::UserDataOperator(
               flux_name, UserDataOperator::OPROW),
           volSideFe(ctx.mField), cTx(ctx) {
       volSideFe.getOpPtrVector().push_back(new OpSkeleton::OpVolSide(valMap));
     }

Member Function Documentation

◆ doWork()

MoFEMErrorCode MixTransport::MixTransportElement::OpSkeleton::doWork	(	int	side,
		EntityType	type,
		DataForcesAndSourcesCore::EntData &	data
	)

Definition at line 1560 of file MixTransportElement.hpp.

                                                                  {
       MoFEMFunctionBegin;
 
       if (type == MBTRI) {
         EntityHandle fe_ent = getNumeredEntFiniteElementPtr()->getEnt();
 
         double def_val = 0;
         Tag th_error_jump;
         CHKERR cTx.mField.get_moab().tag_get_handle(
             "ERROR_JUMP", 1, MB_TYPE_DOUBLE, th_error_jump,
             MB_TAG_CREAT | MB_TAG_SPARSE, &def_val);
         double *error_jump_ptr;
         CHKERR cTx.mField.get_moab().tag_get_by_ptr(
             th_error_jump, &fe_ent, 1, (const void **)&error_jump_ptr);
         *error_jump_ptr = 0;
 
         // check if this is essential boundary condition
         EntityHandle essential_bc_meshset =
             cTx.mField.get_finite_element_meshset("MIX_BCFLUX");
         if (cTx.mField.get_moab().contains_entities(essential_bc_meshset,
                                                     &fe_ent, 1)) {
           // essential bc, np jump then, exit and go to next face
           MoFEMFunctionReturnHot(0);
         }
 
         // calculate values form adjacent tets
         valMap.clear();
         CHKERR loopSideVolumes("MIX", volSideFe);
         ;
 
         int nb_gauss_pts = data.getN().size1();
 
         // it is only one face, so it has to be bc natural boundary condition
         if (valMap.size() == 1) {
           if (static_cast<int>(valMap.begin()->second.size()) != nb_gauss_pts) {
             SETERRQ(PETSC_COMM_WORLD, MOFEM_DATA_INCONSISTENCY,
                     "wrong number of integration points");
           }
           for (int gg = 0; gg != nb_gauss_pts; gg++) {
             double x, y, z;
             if (static_cast<int>(getNormalsAtGaussPts().size1()) ==
                 nb_gauss_pts) {
               x = getHoCoordsAtGaussPts()(gg, 0);
               y = getHoCoordsAtGaussPts()(gg, 1);
               z = getHoCoordsAtGaussPts()(gg, 2);
             } else {
               x = getCoordsAtGaussPts()(gg, 0);
               y = getCoordsAtGaussPts()(gg, 1);
               z = getCoordsAtGaussPts()(gg, 2);
             }
             double value;
             CHKERR cTx.getBcOnValues(fe_ent, gg, x, y, z, value);
             ;
             double w = getGaussPts()(2, gg);
             if (static_cast<int>(getNormalsAtGaussPts().size1()) ==
                 nb_gauss_pts) {
               w *= norm_2(getNormalsAtGaussPts(gg)) * 0.5;
             } else {
               w *= getArea();
             }
             *error_jump_ptr += w * pow(value - valMap.begin()->second[gg], 2);
           }
         } else if (valMap.size() == 2) {
           for (int gg = 0; gg != nb_gauss_pts; gg++) {
             double w = getGaussPts()(2, gg);
             if (getNormalsAtGaussPts().size1() == (unsigned int)nb_gauss_pts) {
               w *= norm_2(getNormalsAtGaussPts(gg)) * 0.5;
             } else {
               w *= getArea();
             }
             double delta = valMap.at(1)[gg] - valMap.at(-1)[gg];
             *error_jump_ptr += w * pow(delta, 2);
           }
         } else {
           SETERRQ1(PETSC_COMM_WORLD, MOFEM_DATA_INCONSISTENCY,
                    "data inconsistency, wrong number of neighbors "
                    "valMap.size() = %d",
                    valMap.size());
         }
       }
 
       MoFEMFunctionReturn(0);
     }

Member Data Documentation

◆ cTx

MixTransportElement& MixTransport::MixTransportElement::OpSkeleton::cTx

Definition at line 1551 of file MixTransportElement.hpp.

◆ valMap

map<int, VectorDouble> MixTransport::MixTransportElement::OpSkeleton::valMap

store values at integration point, key of the map is sense of face in respect to adjacent tetrahedra

Definition at line 1524 of file MixTransportElement.hpp.

◆ volSideFe

VolumeElementForcesAndSourcesCoreOnSide MixTransport::MixTransportElement::OpSkeleton::volSideFe

volume element to get values from adjacent tets to face

Definition at line 1519 of file MixTransportElement.hpp.

The documentation for this struct was generated from the following file:

users_modules/basic_finite_elements/mix_transport/src/MixTransportElement.hpp

Classes

Public Member Functions

Public Attributes

Additional Inherited Members