v0.9.1
Public Member Functions | Public Attributes | List of all members
MixTransport::UnsaturatedFlowElement::OpEvaluateInitiallHead Struct Reference

#include <users_modules/basic_finite_elements/mix_transport/src/UnsaturatedFlow.hpp>

Inheritance diagram for MixTransport::UnsaturatedFlowElement::OpEvaluateInitiallHead:
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Collaboration diagram for MixTransport::UnsaturatedFlowElement::OpEvaluateInitiallHead:
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Public Member Functions

 OpEvaluateInitiallHead (UnsaturatedFlowElement &ctx, const std::string &val_name)
 
MoFEMErrorCode doWork (int side, EntityType type, DataForcesAndSourcesCore::EntData &data)
 
- Public Member Functions inherited from MoFEM::VolumeElementForcesAndSourcesCoreBase::UserDataOperator
int getNumNodes ()
 get element number of nodes More...
 
const EntityHandlegetConn ()
 get element connectivity More...
 
double getVolume () const
 element volume (linear geometry) More...
 
doublegetVolume ()
 element volume (linear geometry) More...
 
FTensor::Tensor2< double *, 3, 3 > & getJac ()
 get element Jacobian More...
 
FTensor::Tensor2< double *, 3, 3 > & getInvJac ()
 get element inverse Jacobian More...
 
double getMeasure () const
 get measure of element More...
 
doublegetMeasure ()
 get measure of element More...
 
VectorDoublegetCoords ()
 nodal coordinates More...
 
MatrixDoublegetCoordsAtGaussPts ()
 Gauss points and weight, matrix (nb. of points x 3) More...
 
MatrixDoublegetHoCoordsAtGaussPts ()
 coordinate at Gauss points (if hierarchical approximation of element geometry) More...
 
MatrixDoublegetHoGaussPtsJac ()
 
MatrixDoublegetHoGaussPtsInvJac ()
 
VectorDoublegetHoGaussPtsDetJac ()
 
auto getFTenosr0HoMeasure ()
 
auto getFTensor1CoordsAtGaussPts ()
 Get coordinates at integration points assuming linear geometry. More...
 
auto getFTensor1HoCoordsAtGaussPts ()
 Get coordinates at integration points taking geometry from field. More...
 
auto getFTensor2HoGaussPtsJac ()
 
auto getFTensor2HoGaussPtsInvJac ()
 
VolumeElementForcesAndSourcesCoreBasegetVolumeFE () const
 return pointer to Generic Volume Finite Element object More...
 
MoFEMErrorCode getDivergenceOfHDivBaseFunctions (int side, EntityType type, DataForcesAndSourcesCore::EntData &data, int gg, VectorDouble &div)
 Get divergence of base functions at integration point. More...
 
MoFEMErrorCode getCurlOfHCurlBaseFunctions (int side, EntityType type, DataForcesAndSourcesCore::EntData &data, int gg, MatrixDouble &curl)
 Get curl of base functions at integration point. More...
 
- Public Member Functions inherited from MoFEM::ForcesAndSourcesCore::UserDataOperator
 UserDataOperator (const FieldSpace space, const char type=OPLAST, const bool symm=true)
 
 UserDataOperator (const std::string &field_name, const char type, const bool symm=true)
 
 UserDataOperator (const std::string &row_field_name, const std::string &col_field_name, const char type, const bool symm=true)
 
boost::shared_ptr< const NumeredEntFiniteElementgetNumeredEntFiniteElementPtr () const
 Return raw pointer to NumeredEntFiniteElement. More...
 
EntityHandle getFEEntityHandle () const
 Return finite element entity handle. More...
 
boost::weak_ptr< SideNumber > getSideNumberPtr (const int side_number, const EntityType type)
 Get the side number pointer. More...
 
EntityHandle getSideEntity (const int side_number, const EntityType type)
 Get the side entity. More...
 
int getNumberOfNodesOnElement ()
 Get the number of nodes on finite element. More...
 
MoFEMErrorCode getProblemRowIndices (const std::string filed_name, const EntityType type, const int side, VectorInt &indices) const
 Get row indices. More...
 
MoFEMErrorCode getProblemColIndices (const std::string filed_name, const EntityType type, const int side, VectorInt &indices) const
 Get col indices. More...
 
const FEMethodgetFEMethod () const
 Return raw pointer to Finite Element Method object. More...
 
int getOpType () const
 Get operator types. More...
 
void setOpType (const OpType type)
 Set operator type. More...
 
void addOpType (const OpType type)
 Add operator type. More...
 
int getNinTheLoop () const
 get number of finite element in the loop More...
 
int getLoopSize () const
 get size of elements in the loop More...
 
const std::string & getFEName () const
 Get name of the element. More...
 
const PetscData::SwitchesgetDataCtx () const
 
const KspMethod::KSPContext getKSPCtx () const
 
const SnesMethod::SNESContext getSNESCtx () const
 
const TSMethod::TSContext getTSCtx () const
 
Vec getKSPf () const
 
Mat getKSPA () const
 
Mat getKSPB () const
 
Vec getSNESf () const
 
Vec getSNESx () const
 
Mat getSNESA () const
 
Mat getSNESB () const
 
DEPRECATED Vec getSnesF () const
 
DEPRECATED Vec getSnesX () const
 
DEPRECATED Mat getSnesA () const
 
DEPRECATED Mat getSnesB () const
 
Vec getTSu () const
 
Vec getTSu_t () const
 
Vec getTSu_tt () const
 
Vec getTSf () const
 
Mat getTSA () const
 
Mat getTSB () const
 
int getTSstep () const
 
double getTStime () const
 
double getTSa () const
 
MatrixDoublegetGaussPts ()
 matrix of integration (Gauss) points for Volume Element More...
 
auto getFTensor0IntegrationWeight ()
 Get integration weights. More...
 
DEPRECATED MoFEMErrorCode getPorblemRowIndices (const std::string filed_name, const EntityType type, const int side, VectorInt &indices) const
 
- Public Member Functions inherited from MoFEM::DataOperator
 DataOperator (const bool symm=true)
 
virtual ~DataOperator ()=default
 
virtual MoFEMErrorCode doWork (int row_side, int col_side, EntityType row_type, EntityType col_type, DataForcesAndSourcesCore::EntData &row_data, DataForcesAndSourcesCore::EntData &col_data)
 Operator for bi-linear form, usually to calculate values on left hand side. More...
 
virtual MoFEMErrorCode opLhs (DataForcesAndSourcesCore &row_data, DataForcesAndSourcesCore &col_data)
 
virtual MoFEMErrorCode doWork (int side, EntityType type, DataForcesAndSourcesCore::EntData &data)
 Operator for linear form, usually to calculate values on right hand side. More...
 
virtual MoFEMErrorCode opRhs (DataForcesAndSourcesCore &data, const bool error_if_no_base=false)
 
bool getSymm () const
 Get if operator uses symmetry of DOFs or not. More...
 
void setSymm ()
 set if operator is executed taking in account symmetry More...
 
void unSetSymm ()
 unset if operator is executed for non symmetric problem More...
 

Public Attributes

UnsaturatedFlowElementcTx
 
MatrixDouble nN
 
VectorDouble nF
 
- Public Attributes inherited from MoFEM::ForcesAndSourcesCore::UserDataOperator
char opType
 
std::string rowFieldName
 
std::string colFieldName
 
FieldSpace sPace
 
- Public Attributes inherited from MoFEM::DataOperator
bool sYmm
 If true assume that matrix is symmetric structure. More...
 
std::array< bool, MBMAXTYPE > doEntities
 If true operator is executed for entity. More...
 
booldoVertices
 \deprectaed If false skip vertices More...
 
booldoEdges
 \deprectaed If false skip edges More...
 
booldoQuads
 \deprectaed More...
 
booldoTris
 \deprectaed More...
 
booldoTets
 \deprectaed More...
 
booldoPrisms
 \deprectaed More...
 

Additional Inherited Members

- Public Types inherited from MoFEM::ForcesAndSourcesCore::UserDataOperator
enum  OpType { OPROW = 1 << 0, OPCOL = 1 << 1, OPROWCOL = 1 << 2, OPLAST = 1 << 3 }
 Controls loop over entities on element. More...
 
- Protected Member Functions inherited from MoFEM::VolumeElementForcesAndSourcesCoreBase::UserDataOperator
MoFEMErrorCode setPtrFE (ForcesAndSourcesCore *ptr)
 
- Protected Member Functions inherited from MoFEM::ForcesAndSourcesCore::UserDataOperator
ForcesAndSourcesCoregetPtrFE () const
 
ForcesAndSourcesCoregetSidePtrFE () const
 
- Protected Attributes inherited from MoFEM::ForcesAndSourcesCore::UserDataOperator
ForcesAndSourcesCoreptrFE
 

Detailed Description

Definition at line 840 of file UnsaturatedFlow.hpp.

Constructor & Destructor Documentation

◆ OpEvaluateInitiallHead()

MixTransport::UnsaturatedFlowElement::OpEvaluateInitiallHead::OpEvaluateInitiallHead ( UnsaturatedFlowElement ctx,
const std::string &  val_name 
)
Examples
UnsaturatedFlow.hpp.

Definition at line 843 of file UnsaturatedFlow.hpp.

846  val_name, UserDataOperator::OPROW),
847  cTx(ctx) {}
VolumeElementForcesAndSourcesCoreBase::UserDataOperator UserDataOperator

Member Function Documentation

◆ doWork()

MoFEMErrorCode MixTransport::UnsaturatedFlowElement::OpEvaluateInitiallHead::doWork ( int  side,
EntityType  type,
DataForcesAndSourcesCore::EntData data 
)
Examples
UnsaturatedFlow.hpp.

Definition at line 852 of file UnsaturatedFlow.hpp.

853  {
855  if (data.getFieldData().size() == 0)
857  int nb_dofs = data.getFieldData().size();
858  int nb_gauss_pts = data.getN().size1();
859  if (nb_dofs != static_cast<int>(data.getN().size2())) {
860  SETERRQ(PETSC_COMM_WORLD, MOFEM_DATA_INCONSISTENCY,
861  "wrong number of dofs");
862  }
863  nN.resize(nb_dofs, nb_dofs, false);
864  nF.resize(nb_dofs, false);
865  nN.clear();
866  nF.clear();
867 
868  // Get EntityHandle of the finite element
869  EntityHandle fe_ent = getFEEntityHandle();
870  // Get material block id
871  int block_id;
872  CHKERR cTx.getMaterial(fe_ent, block_id);
873  // Get material block
874  boost::shared_ptr<GenericMaterial> &block_data = cTx.dMatMap.at(block_id);
875 
876  // loop over integration points
877  for (int gg = 0; gg < nb_gauss_pts; gg++) {
878  // get coordinates at integration point
879  block_data->x = getCoordsAtGaussPts()(gg, 0);
880  block_data->y = getCoordsAtGaussPts()(gg, 1);
881  block_data->z = getCoordsAtGaussPts()(gg, 2);
882  // get weight for integration rule
883  double alpha = getGaussPts()(2, gg) * getVolume();
884  nN += alpha * outer_prod(data.getN(gg), data.getN(gg));
885  nF += alpha * block_data->initialPcEval() * data.getN(gg);
886  }
887 
888  // factor matrix
890  // solve local problem
891  cholesky_solve(nN, nF, ublas::lower());
892 
893  // set solution to vector
894  CHKERR VecSetValues(cTx.D1, nb_dofs, &*data.getIndices().begin(),
895  &*nF.begin(), INSERT_VALUES);
896 
898  }
MatrixDouble & getGaussPts()
matrix of integration (Gauss) points for Volume Element
Vec D1
Vector with inital head capillary pressure.
#define MoFEMFunctionReturn(a)
Last executable line of each PETSc function used for error handling. Replaces return()
Definition: definitions.h:483
virtual MoFEMErrorCode getMaterial(const EntityHandle ent, int &block_id) const
For given element handle get material block Id.
#define MoFEMFunctionReturnHot(a)
Last executable line of each PETSc function used for error handling. Replaces return()
Definition: definitions.h:514
MaterialsDoubleMap dMatMap
materials database
size_t cholesky_decompose(const MATRIX &A, TRIA &L)
decompose the symmetric positive definit matrix A into product L L^T.
Definition: cholesky.hpp:52
MatrixDouble & getCoordsAtGaussPts()
Gauss points and weight, matrix (nb. of points x 3)
EntityHandle getFEEntityHandle() const
Return finite element entity handle.
void cholesky_solve(const TRIA &L, VEC &x, ublas::lower)
solve system L L^T x = b inplace
Definition: cholesky.hpp:221
MoFEMErrorCode VecSetValues(Vec V, const DataForcesAndSourcesCore::EntData &data, const double *ptr, InsertMode iora)
Assemble PETSc vector.
#define CHKERR
Inline error check.
Definition: definitions.h:602
#define MoFEMFunctionBegin
First executable line of each MoFEM function, used for error handling. Final line of MoFEM functions ...
Definition: definitions.h:413

Member Data Documentation

◆ cTx

UnsaturatedFlowElement& MixTransport::UnsaturatedFlowElement::OpEvaluateInitiallHead::cTx
Examples
UnsaturatedFlow.hpp.

Definition at line 842 of file UnsaturatedFlow.hpp.

◆ nF

VectorDouble MixTransport::UnsaturatedFlowElement::OpEvaluateInitiallHead::nF
Examples
UnsaturatedFlow.hpp.

Definition at line 850 of file UnsaturatedFlow.hpp.

◆ nN

MatrixDouble MixTransport::UnsaturatedFlowElement::OpEvaluateInitiallHead::nN
Examples
UnsaturatedFlow.hpp.

Definition at line 849 of file UnsaturatedFlow.hpp.


The documentation for this struct was generated from the following file: