v0.9.0
Public Member Functions | Public Attributes | List of all members
MixTransport::UnsaturatedFlowElement::OpPostProcMaterial Struct Reference

#include <users_modules/basic_finite_elements/mix_transport/src/UnsaturatedFlow.hpp>

Inheritance diagram for MixTransport::UnsaturatedFlowElement::OpPostProcMaterial:
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Collaboration diagram for MixTransport::UnsaturatedFlowElement::OpPostProcMaterial:
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Public Member Functions

 OpPostProcMaterial (UnsaturatedFlowElement &ctx, moab::Interface &post_proc_mesh, std::vector< EntityHandle > &map_gauss_pts, const std::string field_name)
 
MoFEMErrorCode doWork (int side, EntityType type, DataForcesAndSourcesCore::EntData &data)
 
- Public Member Functions inherited from MoFEM::VolumeElementForcesAndSourcesCoreBase::UserDataOperator
int getNumNodes ()
 get element number of nodes More...
 
const EntityHandlegetConn ()
 get element connectivity More...
 
double getVolume () const
 element volume (linear geometry) More...
 
doublegetVolume ()
 element volume (linear geometry) More...
 
FTensor::Tensor2< double *, 3, 3 > & getJac ()
 get element Jacobian More...
 
FTensor::Tensor2< double *, 3, 3 > & getInvJac ()
 get element inverse Jacobian More...
 
double getMeasure () const
 get measure of element More...
 
doublegetMeasure ()
 get measure of element More...
 
VectorDoublegetCoords ()
 nodal coordinates More...
 
MatrixDoublegetCoordsAtGaussPts ()
 Gauss points and weight, matrix (nb. of points x 3) More...
 
MatrixDoublegetHoCoordsAtGaussPts ()
 coordinate at Gauss points (if hierarchical approximation of element geometry) More...
 
MatrixDoublegetHoGaussPtsJac ()
 
MatrixDoublegetHoGaussPtsInvJac ()
 
VectorDoublegetHoGaussPtsDetJac ()
 
auto getFTenosr0HoMeasure ()
 
auto getFTensor1CoordsAtGaussPts ()
 Get coordinates at integration points assuming linear geometry. More...
 
auto getFTensor1HoCoordsAtGaussPts ()
 Get coordinates at integration points taking geometry from field. More...
 
auto getFTensor2HoGaussPtsJac ()
 
auto getFTensor2HoGaussPtsInvJac ()
 
VolumeElementForcesAndSourcesCoreBasegetVolumeFE () const
 return pointer to Generic Volume Finite Element object More...
 
MoFEMErrorCode getDivergenceOfHDivBaseFunctions (int side, EntityType type, DataForcesAndSourcesCore::EntData &data, int gg, VectorDouble &div)
 Get divergence of base functions at integration point. More...
 
MoFEMErrorCode getCurlOfHCurlBaseFunctions (int side, EntityType type, DataForcesAndSourcesCore::EntData &data, int gg, MatrixDouble &curl)
 Get curl of base functions at integration point. More...
 
- Public Member Functions inherited from MoFEM::ForcesAndSourcesCore::UserDataOperator
 UserDataOperator (const FieldSpace space, const char type=OPLAST, const bool symm=true)
 
 UserDataOperator (const std::string &field_name, const char type, const bool symm=true)
 
 UserDataOperator (const std::string &row_field_name, const std::string &col_field_name, const char type, const bool symm=true)
 
boost::shared_ptr< const NumeredEntFiniteElementgetNumeredEntFiniteElementPtr () const
 Return raw pointer to NumeredEntFiniteElement. More...
 
EntityHandle getFEEntityHandle () const
 Return finite element entity handle. More...
 
boost::weak_ptr< SideNumber > getSideNumberPtr (const int side_number, const EntityType type)
 Get the side number pointer. More...
 
EntityHandle getSideEntity (const int side_number, const EntityType type)
 Get the side entity. More...
 
int getNumberOfNodesOnElement ()
 Get the number of nodes on finite element. More...
 
MoFEMErrorCode getProblemRowIndices (const std::string filed_name, const EntityType type, const int side, VectorInt &indices) const
 Get row indices. More...
 
MoFEMErrorCode getProblemColIndices (const std::string filed_name, const EntityType type, const int side, VectorInt &indices) const
 Get col indices. More...
 
const FEMethodgetFEMethod () const
 Return raw pointer to Finite Element Method object. More...
 
int getOpType () const
 Get operator types. More...
 
void setOpType (const OpType type)
 Set operator type. More...
 
void addOpType (const OpType type)
 Add operator type. More...
 
int getNinTheLoop () const
 get number of finite element in the loop More...
 
int getLoopSize () const
 get size of elements in the loop More...
 
const std::string & getFEName () const
 Get name of the element. More...
 
Vec getSnesF () const
 
Vec getSnesX () const
 
Mat getSnesA () const
 
Mat getSnesB () const
 
Vec getTSu () const
 
Vec getTSu_t () const
 
Vec getTSf () const
 
Mat getTSA () const
 
Mat getTSB () const
 
int getTSstep () const
 
double getTStime () const
 
double getTSa () const
 
MatrixDoublegetGaussPts ()
 matrix of integration (Gauss) points for Volume Element More...
 
auto getFTensor0IntegrationWeight ()
 Get integration weights. More...
 
DEPRECATED MoFEMErrorCode getPorblemRowIndices (const std::string filed_name, const EntityType type, const int side, VectorInt &indices) const
 
- Public Member Functions inherited from MoFEM::DataOperator
 DataOperator (const bool symm=true, const bool do_vertices=true, const bool do_edges=true, const bool do_quads=true, const bool do_tris=true, const bool do_tets=true, const bool do_prisms=true)
 
virtual ~DataOperator ()
 
virtual MoFEMErrorCode doWork (int row_side, int col_side, EntityType row_type, EntityType col_type, DataForcesAndSourcesCore::EntData &row_data, DataForcesAndSourcesCore::EntData &col_data)
 Operator for bi-linear form, usually to calculate values on left hand side. More...
 
virtual MoFEMErrorCode opLhs (DataForcesAndSourcesCore &row_data, DataForcesAndSourcesCore &col_data, bool symm=true)
 
virtual MoFEMErrorCode opLhs (DataForcesAndSourcesCore &row_data, DataForcesAndSourcesCore &col_data)
 
virtual MoFEMErrorCode doWork (int side, EntityType type, DataForcesAndSourcesCore::EntData &data)
 Operator for linear form, usually to calculate values on right hand side. More...
 
virtual MoFEMErrorCode opRhs (DataForcesAndSourcesCore &data, const bool do_vertices, const bool do_edges, const bool do_quads, const bool do_tris, const bool do_tets, const bool do_prisms, const bool error_if_no_base=true)
 
virtual MoFEMErrorCode opRhs (DataForcesAndSourcesCore &data, const bool error_if_no_base=true)
 
bool getSymm () const
 Get if operator uses symmetry of DOFs or not. More...
 
void setSymm ()
 set if operator is executed taking in account symmetry More...
 
void unSetSymm ()
 unset if operator is executed for non symmetric problem More...
 

Public Attributes

UnsaturatedFlowElementcTx
 
moab::Interface & postProcMesh
 
std::vector< EntityHandle > & mapGaussPts
 
- Public Attributes inherited from MoFEM::ForcesAndSourcesCore::UserDataOperator
char opType
 
std::string rowFieldName
 
std::string colFieldName
 
FieldSpace sPace
 
- Public Attributes inherited from MoFEM::DataOperator
bool sYmm
 If true assume that matrix is symmetric structure. More...
 
bool doVertices
 If false skip vertices. More...
 
bool doEdges
 If false skip edges. More...
 
bool doQuads
 
bool doTris
 
bool doTets
 
bool doPrisms
 

Additional Inherited Members

- Public Types inherited from MoFEM::ForcesAndSourcesCore::UserDataOperator
enum  OpType { OPROW = 1 << 0, OPCOL = 1 << 1, OPROWCOL = 1 << 2, OPLAST = 1 << 3 }
 Controls loop over entities on element. More...
 
- Protected Member Functions inherited from MoFEM::ForcesAndSourcesCore::UserDataOperator
MoFEMErrorCode setPtrFE (ForcesAndSourcesCore *ptr)
 
ForcesAndSourcesCoregetPtrFE () const
 
ForcesAndSourcesCoregetSidePtrFE () const
 
- Protected Attributes inherited from MoFEM::ForcesAndSourcesCore::UserDataOperator
ForcesAndSourcesCoreptrFE
 

Detailed Description

Operator used to post-process results for unsaturated infiltration problem. Operator should with element for post-processing results, i.e. PostProcVolumeOnRefinedMesh

Definition at line 954 of file UnsaturatedFlow.hpp.

Constructor & Destructor Documentation

◆ OpPostProcMaterial()

MixTransport::UnsaturatedFlowElement::OpPostProcMaterial::OpPostProcMaterial ( UnsaturatedFlowElement ctx,
moab::Interface &  post_proc_mesh,
std::vector< EntityHandle > &  map_gauss_pts,
const std::string  field_name 
)
Examples
UnsaturatedFlow.hpp.

Definition at line 961 of file UnsaturatedFlow.hpp.

966  field_name, ForcesAndSourcesCore::UserDataOperator::OPROW),
967  cTx(ctx), postProcMesh(post_proc_mesh), mapGaussPts(map_gauss_pts) {}
moab::Interface & postProcMesh
VolumeElementForcesAndSourcesCoreBase::UserDataOperator UserDataOperator
UnsaturatedFlowElement & cTx
std::vector< EntityHandle > & mapGaussPts

Member Function Documentation

◆ doWork()

MoFEMErrorCode MixTransport::UnsaturatedFlowElement::OpPostProcMaterial::doWork ( int  side,
EntityType  type,
DataForcesAndSourcesCore::EntData data 
)
Examples
UnsaturatedFlow.hpp.

Definition at line 969 of file UnsaturatedFlow.hpp.

970  {
972  int nb_dofs = data.getFieldData().size();
973  if (nb_dofs == 0)
975 
976  // Get EntityHandle of the finite element
977  EntityHandle fe_ent = getNumeredEntFiniteElementPtr()->getEnt();
978  // Get material block id
979  int block_id;
980  CHKERR cTx.getMaterial(fe_ent, block_id);
981  // Get material block
982  boost::shared_ptr<GenericMaterial> &block_data = cTx.dMatMap.at(block_id);
983 
984  // Set bloc Id
985  Tag th_id;
986  int def_block_id = -1;
987  CHKERR postProcMesh.tag_get_handle("BLOCK_ID", 1, MB_TYPE_INTEGER, th_id,
988  MB_TAG_CREAT | MB_TAG_SPARSE,
989  &def_block_id);
990  CHKERR postProcMesh.tag_set_data(th_id, &fe_ent, 1, &block_id);
991 
992  // Create mesh tag. Tags are created on post-processing mesh and
993  // visable in post-processor, e.g. Paraview
994  double zero = 0;
995  Tag th_theta;
996  CHKERR postProcMesh.tag_get_handle("THETA", 1, MB_TYPE_DOUBLE, th_theta,
997  MB_TAG_CREAT | MB_TAG_SPARSE, &zero);
998  Tag th_se;
999  CHKERR postProcMesh.tag_get_handle("Se", 1, MB_TYPE_DOUBLE, th_se,
1000  MB_TAG_CREAT | MB_TAG_SPARSE, &zero);
1001  // Tag th_ks;
1002  // CHKERR postProcMesh.tag_get_handle(
1003  // "Ks",1,MB_TYPE_DOUBLE,th_ks,
1004  // MB_TAG_CREAT|MB_TAG_SPARSE,&zero
1005  // );
1006  // CHKERR postProcMesh.tag_set_data(th_ks,&fe_ent,1,&block_data->Ks);
1007  Tag th_k;
1008  CHKERR postProcMesh.tag_get_handle("K", 1, MB_TYPE_DOUBLE, th_k,
1009  MB_TAG_CREAT | MB_TAG_SPARSE, &zero);
1010  Tag th_c;
1011  CHKERR postProcMesh.tag_get_handle("C", 1, MB_TYPE_DOUBLE, th_c,
1012  MB_TAG_CREAT | MB_TAG_SPARSE, &zero);
1013 
1014  // Get pressure at integration points
1016  // Coords at integration points
1017  auto t_coords = getFTensor1CoordsAtGaussPts();
1018 
1019  int nb_gauss_pts = data.getN().size1();
1020  for (int gg = 0; gg < nb_gauss_pts; gg++) {
1021  block_data->h = t_h;
1022  block_data->x = t_coords(0);
1023  block_data->y = t_coords(1);
1024  block_data->z = t_coords(2);
1025  // Calculate theta (water content) and save it on mesh tags
1026  CHKERR block_data->calTheta();
1027  double theta = block_data->tHeta;
1028  CHKERR postProcMesh.tag_set_data(th_theta, &mapGaussPts[gg], 1, &theta);
1029  CHKERR block_data->calSe();
1030  // Calculate Se (effective saturation and save it on the mesh tags)
1031  double Se = block_data->Se;
1032  CHKERR postProcMesh.tag_set_data(th_se, &mapGaussPts[gg], 1, &Se);
1033  // Calculate K (hydraulic conductivity) and save it on the mesh tags
1034  CHKERR block_data->calK();
1035  double K = block_data->K;
1036  CHKERR postProcMesh.tag_set_data(th_k, &mapGaussPts[gg], 1, &K);
1037  // Calculate water capacity and save it on the mesh tags
1038  CHKERR block_data->calC();
1039  double C = block_data->C;
1040  CHKERR postProcMesh.tag_set_data(th_c, &mapGaussPts[gg], 1, &C);
1041  ++t_h;
1042  ++t_coords;
1043  }
1044 
1046  }
static FTensor::Tensor0< FTensor::PackPtr< double *, 1 > > getFTensor0FromVec(ublas::vector< T, A > &data)
Get tensor rank 0 (scalar) form data vector.
Definition: Templates.hpp:142
VectorDouble valuesAtGaussPts
values at integration points on element
#define MoFEMFunctionReturn(a)
Last executable line of each PETSc function used for error handling. Replaces return()
Definition: definitions.h:477
virtual MoFEMErrorCode getMaterial(const EntityHandle ent, int &block_id) const
For given element handle get material block Id.
#define MoFEMFunctionReturnHot(a)
Last executable line of each PETSc function used for error handling. Replaces return()
Definition: definitions.h:508
MaterialsDoubleMap dMatMap
materials database
boost::shared_ptr< const NumeredEntFiniteElement > getNumeredEntFiniteElementPtr() const
Return raw pointer to NumeredEntFiniteElement.
moab::Interface & postProcMesh
#define CHKERR
Inline error check.
Definition: definitions.h:596
UnsaturatedFlowElement & cTx
#define MoFEMFunctionBegin
First executable line of each MoFEM function, used for error handling. Final line of MoFEM functions ...
Definition: definitions.h:407
auto getFTensor1CoordsAtGaussPts()
Get coordinates at integration points assuming linear geometry.
std::vector< EntityHandle > & mapGaussPts

Member Data Documentation

◆ cTx

UnsaturatedFlowElement& MixTransport::UnsaturatedFlowElement::OpPostProcMaterial::cTx
Examples
UnsaturatedFlow.hpp.

Definition at line 957 of file UnsaturatedFlow.hpp.

◆ mapGaussPts

std::vector<EntityHandle>& MixTransport::UnsaturatedFlowElement::OpPostProcMaterial::mapGaussPts
Examples
UnsaturatedFlow.hpp.

Definition at line 959 of file UnsaturatedFlow.hpp.

◆ postProcMesh

moab::Interface& MixTransport::UnsaturatedFlowElement::OpPostProcMaterial::postProcMesh
Examples
UnsaturatedFlow.hpp.

Definition at line 958 of file UnsaturatedFlow.hpp.


The documentation for this struct was generated from the following file: