Data structure to exchange data between mofem and User Loop Methods.It allows to exchange data between MoFEM and user functions. It stores information about multi-indices. More...

#include <src/interfaces/LoopMethods.hpp>

Inheritance diagram for MoFEM::BasicMethod:

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Collaboration diagram for MoFEM::BasicMethod:

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Public Member Functions
MoFEMErrorCode	query_interface (const MOFEMuuid &uuid, UnknownInterface **iface) const

	BasicMethod ()

virtual	~BasicMethod ()

int	getNinTheLoop () const
	get number of evaluated element in the loop More...

int	getLoopSize () const
	get loop size More...

MoFEMErrorCode	copyBasicMethod (const BasicMethod &basic)

virtual MoFEMErrorCode	preProcess ()
	function is run at the beginning of loop More...

virtual MoFEMErrorCode	operator() ()
	function is run for every finite element More...

virtual MoFEMErrorCode	postProcess ()
	function is run at the end of loop More...

Public Member Functions inherited from MoFEM::KspMethod
	KspMethod ()

virtual	~KspMethod ()

MoFEMErrorCode	setKspCtx (const KSPContext &ctx)
	set operator type More...

MoFEMErrorCode	setKsp (KSP ksp)
	set solver More...

MoFEMErrorCode	copyKsp (const KspMethod &ksp)
	copy data form another method More...

Public Member Functions inherited from MoFEM::UnknownInterface
template<class IFACE >
MoFEMErrorCode	registerInterface (const MOFEMuuid &uuid, bool error_if_registration_failed=true)
	Register interface. More...

template<class IFACE , bool VERIFY = false>
MoFEMErrorCode	getInterface (const MOFEMuuid &uuid, IFACE *&iface) const
	Get interface by uuid and return reference to pointer of interface. More...

template<class IFACE >
MoFEMErrorCode	getInterface (IFACE *&iface) const
	Get interface refernce to pointer of interface. More...

template<class IFACE >
MoFEMErrorCode	getInterface (IFACE **const iface) const
	Get interface pointer to pointer of interface. More...

template<class IFACE , typename boost::enable_if< boost::is_pointer< IFACE >, int >::type = 0>
IFACE	getInterface () const
	Get interface pointer to pointer of interface. More...

template<class IFACE , typename boost::enable_if< boost::is_reference< IFACE >, int >::type = 0>
IFACE	getInterface () const
	Get reference to interface. More...

template<class IFACE >
IFACE *	getInterface () const
	Function returning pointer to interface. More...

virtual	~UnknownInterface ()

virtual MoFEMErrorCode	getLibVersion (Version &version) const
	Get library version. More...

virtual const MoFEMErrorCode	getFileVersion (moab::Interface &moab, Version &version) const
	Get database major version. More...

virtual MoFEMErrorCode	getInterfaceVersion (Version &version) const
	Get database major version. More...

template<>
MoFEMErrorCode	getInterface (const MOFEMuuid &uuid, UnknownInterface *&iface) const

Public Member Functions inherited from MoFEM::SnesMethod
	SnesMethod ()

virtual	~SnesMethod ()

MoFEMErrorCode	setSnesCtx (const SNESContext &ctx)
	Set SNES context. More...

MoFEMErrorCode	setSnes (SNES snes)
	Set SNES instance. More...

MoFEMErrorCode	copySnes (const SnesMethod &snes)
	Copy snes data. More...

Public Member Functions inherited from MoFEM::TSMethod
	TSMethod ()

virtual	~TSMethod ()

MoFEMErrorCode	setTsCtx (const TSContext &ctx)
	Set Ts context. More...

MoFEMErrorCode	copyTs (const TSMethod &ts)
	Copy TS solver data. More...

MoFEMErrorCode	setTs (TS _ts)
	Set TS solver. More...

Public Attributes
int	nInTheLoop

int	loopSize

int	rAnk

int	sIze

const RefEntity_multiIndex *	refinedEntitiesPtr

const RefElement_multiIndex *	refinedFiniteElementsPtr

const Problem *	problemPtr

const Field_multiIndex *	fieldsPtr

const FieldEntity_multiIndex *	entitiesPtr

const DofEntity_multiIndex *	dofsPtr

const FiniteElement_multiIndex *	finiteElementsPtr

const EntFiniteElement_multiIndex *	finiteElementsEntitiesPtr

const FieldEntityEntFiniteElementAdjacencyMap_multiIndex *	adjacenciesPtr

boost::function< MoFEMErrorCode()>	preProcessHook

boost::function< MoFEMErrorCode()>	postProcessHook

boost::function< MoFEMErrorCode()>	operatorHook

Public Attributes inherited from MoFEM::KspMethod
KSPContext	ksp_ctx
	Context. More...

KSP	ksp
	KSP solver. More...

Vec	ksp_f
	the right hand side vector More...

Mat	ksp_A
	matrix More...

Mat	ksp_B
	preconditioner matrix More...

Public Attributes inherited from MoFEM::SnesMethod
SNESContext	snes_ctx

SNES	snes

Vec	snes_x

Vec	snes_f

Mat	snes_A

Mat	snes_B

Public Attributes inherited from MoFEM::TSMethod
TSContext	ts_ctx

TS	ts

Vec	ts_u

Vec	ts_u_t

Vec	ts_F

Mat	ts_A

Mat	ts_B

PetscInt	ts_step

PetscReal	ts_a

PetscReal	ts_t

Private Member Functions
void	iNit ()

Additional Inherited Members
Public Types inherited from MoFEM::KspMethod
enum	KSPContext { CTX_SETFUNCTION, CTX_OPERATORS, CTX_KSPNONE }
	pass information about context of KSP/DM for with finite element is computed More...

Public Types inherited from MoFEM::SnesMethod
enum	SNESContext { CTX_SNESSETFUNCTION, CTX_SNESSETJACOBIAN, CTX_SNESNONE }

Public Types inherited from MoFEM::TSMethod
enum	TSContext { CTX_TSSETRHSFUNCTION, CTX_TSSETRHSJACOBIAN, CTX_TSSETIFUNCTION, CTX_TSSETIJACOBIAN, CTX_TSTSMONITORSET, CTX_TSNONE }

Protected Member Functions inherited from MoFEM::UnknownInterface
boost::typeindex::type_index	getClassIdx (const MOFEMuuid &uid) const
	Get type name for interface Id. More...

MOFEMuuid	getUId (const boost::typeindex::type_index &class_idx) const
	Get interface Id for class name. More...

Detailed Description

Data structure to exchange data between mofem and User Loop Methods.

It allows to exchange data between MoFEM and user functions. It stores information about multi-indices.

Definition at line 207 of file LoopMethods.hpp.

Constructor & Destructor Documentation

◆ BasicMethod()

BasicMethod::BasicMethod ( )

Definition at line 91 of file LoopMethods.cpp.

     : KspMethod(), SnesMethod(), TSMethod(), nInTheLoop(0), loopSize(0),
       refinedEntitiesPtr(NULL), refinedFiniteElementsPtr(NULL),
       problemPtr(NULL), fieldsPtr(NULL), entitiesPtr(NULL), dofsPtr(NULL),
       finiteElementsPtr(NULL), finiteElementsEntitiesPtr(NULL),
       adjacenciesPtr(NULL), preProcessHook(NULL), postProcessHook(NULL),
       operatorHook(NULL) {}

◆ ~BasicMethod()

virtual MoFEM::BasicMethod::~BasicMethod ( )

virtual

Definition at line 219 of file LoopMethods.hpp.

219 {};

Member Function Documentation

◆ copyBasicMethod()

MoFEMErrorCode BasicMethod::copyBasicMethod ( const BasicMethod & basic )

Definition at line 99 of file LoopMethods.cpp.

                                                                     {
   MoFEMFunctionBeginHot;
 
   this->nInTheLoop = basic.nInTheLoop;
   this->loopSize = basic.loopSize;
   this->rAnk = basic.rAnk;
   this->sIze = basic.sIze;
   this->refinedEntitiesPtr = basic.refinedEntitiesPtr;
   this->refinedFiniteElementsPtr = basic.refinedFiniteElementsPtr;
   this->problemPtr = basic.problemPtr;
   this->fieldsPtr = basic.fieldsPtr;
   this->entitiesPtr = basic.entitiesPtr;
   this->dofsPtr = basic.dofsPtr;
   this->finiteElementsPtr = basic.finiteElementsPtr;
   this->finiteElementsEntitiesPtr = basic.finiteElementsEntitiesPtr;
   this->adjacenciesPtr = basic.adjacenciesPtr;
 
   MoFEMFunctionReturnHot(0);
 }

◆ getLoopSize()

int MoFEM::BasicMethod::getLoopSize ( ) const

get loop size

Definition at line 230 of file LoopMethods.hpp.

230 { return loopSize; }

MoFEM::BasicMethod::loopSize

int loopSize

Definition: LoopMethods.hpp:222

◆ getNinTheLoop()

int MoFEM::BasicMethod::getNinTheLoop ( ) const

get number of evaluated element in the loop

Definition at line 226 of file LoopMethods.hpp.

226 { return nInTheLoop; }

MoFEM::BasicMethod::nInTheLoop

int nInTheLoop

Definition: LoopMethods.hpp:219

◆ iNit()

void MoFEM::BasicMethod::iNit ( )

private

◆ operator()()

MoFEMErrorCode BasicMethod::operator() ( )

virtual

function is run for every finite element

It is used to calculate element local matrices and assembly. It can be used for post-processing.

Reimplemented in GelModule::Gel::MonitorPostProc, MixTransport::UnsaturatedFlowElement::MonitorPostProc, FractureMechanics::CrackPropagation::PostProcVertexMethod, MoFEM::ForcesAndSourcesCore, MoFEM::FaceElementForcesAndSourcesCore, MoFEM::VolumeElementForcesAndSourcesCore, MoFEM::FatPrismElementForcesAndSourcesCore, MoFEM::FlatPrismElementForcesAndSourcesCore, MonitorRestart, MoFEM::ProjectionFieldOn10NodeTet, MoFEM::EdgeElementForcesAndSourcesCore, MonitorPostProc, NeummanForcesSurfaceComplexForLazy::MyTriangleSpatialFE, MonitorPostProc, MoFEM::VertexElementForcesAndSourcesCore, BasicFiniteElements::SaveVertexDofOnTag, and MoFEM::Projection10NodeCoordsOnField.

Definition at line 141 of file LoopMethods.cpp.

                                        {
   MoFEMFunctionBeginHot;
   if (operatorHook) {
     ierr = operatorHook();
     CHKERRG(ierr);
   } else {
     SETERRQ(PETSC_COMM_SELF, MOFEM_OPERATION_UNSUCCESSFUL,
             "should be implemented by user in derived class (operator)");
   }
   MoFEMFunctionReturnHot(0);
 }

◆ postProcess()

MoFEMErrorCode BasicMethod::postProcess ( )

virtual

function is run at the end of loop

It is used to assembly matrices and vectors, calculating global variables, f.e. total internal energy, ect.

Iterating over dofs: Example1 iterating over dofs in row by name of the field for(IT_GET_FEROW_BY_NAME_DOFS_FOR_LOOP(this,"DISPLACEMENT",it)) { ... }

Reimplemented in GelModule::Gel::MonitorPostProc, MixTransport::UnsaturatedFlowElement::MonitorPostProc, PostProcFaceOnRefinedMesh, PostProcFatPrismOnRefinedMesh, FractureMechanics::CrackPropagation::PostProcVertexMethod, MoFEM::ForcesAndSourcesCore, SolidShellModule::SolidShellPrismElement::PostProcFatPrismOnTriangleOnRefinedMesh, PostProcTemplateVolumeOnRefinedMesh< MoFEM::VolumeElementForcesAndSourcesCore >, GelModule::Gel::GelFE, MoFEM::FatPrismElementForcesAndSourcesCore, ApplyDirichletBc, KelvinVoigtDamper::DamperFE, MonitorRestart, SolidShellModule::SolidShellPrismElement::SolidShellError, SolidShellModule::SolidShellPrismElement::SolidShell, DirichletFixFieldAtEntitiesBc, AddLambdaVectorToFinternal, MonitorPostProc, MoFEM::Projection10NodeCoordsOnField, AssembleRhsVectors, CohesiveElement::AssembleRhsVectors, Smoother::MyVolumeFE, MonitorPostProc, NonlinearElasticElement::MyVolumeFE, DirichletDisplacementBc, and BasicFiniteElements::SaveVertexDofOnTag.

Definition at line 130 of file LoopMethods.cpp.

                                         {
   MoFEMFunctionBeginHot;
   if (postProcessHook) {
     ierr = postProcessHook();
     CHKERRG(ierr);
   } else {
     SETERRQ(PETSC_COMM_SELF, MOFEM_OPERATION_UNSUCCESSFUL,
             "should be implemented by user in derived class (postProcess)");
   }
   MoFEMFunctionReturnHot(0);
 }

◆ preProcess()

MoFEMErrorCode BasicMethod::preProcess ( )

virtual

function is run at the beginning of loop

It is used to zeroing matrices and vectors, calculation of shape functions on reference element, preprocessing boundary conditions, etc.

Reimplemented in GelModule::Gel::MonitorPostProc, MixTransport::UnsaturatedFlowElement::MonitorPostProc, PostProcFaceOnRefinedMesh, PostProcFatPrismOnRefinedMesh, FractureMechanics::CrackPropagation::PostProcVertexMethod, MoFEM::ForcesAndSourcesCore, PostProcTemplateVolumeOnRefinedMesh< MoFEM::VolumeElementForcesAndSourcesCore >, GelModule::Gel::GelFE, MoFEM::FatPrismElementForcesAndSourcesCore, GroundSurfaceTemerature::SolarRadiationPreProcessor, GroundSurfaceTemerature::PreProcess, KelvinVoigtDamper::DamperFE, MonitorRestart, SolidShellModule::SolidShellPrismElement::SolidShellError, SolidShellModule::SolidShellPrismElement::SolidShell, MoFEM::ProjectionFieldOn10NodeTet, DirichletFixFieldAtEntitiesBc, NeummanForcesSurfaceComplexForLazy::MyTriangleSpatialFE, AssembleRhsVectors, CohesiveElement::AssembleRhsVectors, MonitorPostProc, MonitorPostProc, Smoother::MyVolumeFE, NonlinearElasticElement::MyVolumeFE, DirichletDisplacementBc, MoFEM::Projection10NodeCoordsOnField, FluidPressure::MyTriangleFE, and BasicFiniteElements::SaveVertexDofOnTag.

Definition at line 119 of file LoopMethods.cpp.

                                        {
   MoFEMFunctionBeginHot;
   if (preProcessHook) {
     ierr = preProcessHook();
     CHKERRG(ierr);
   } else {
     SETERRQ(PETSC_COMM_SELF, MOFEM_OPERATION_UNSUCCESSFUL,
             "should be implemented by user in derived class (preProcess)");
   }
   MoFEMFunctionReturnHot(0);
 }

◆ query_interface()

MoFEMErrorCode MoFEM::BasicMethod::query_interface	(	const MOFEMuuid &	uuid,
		UnknownInterface **	iface
	)		const

virtual

Reimplemented from MoFEM::KspMethod.

Reimplemented in MoFEM::DofMethod, MoFEM::EntityMethod, and MoFEM::FEMethod.

Definition at line 209 of file LoopMethods.hpp.

                                                                  {
     if (uuid == IDD_MOFEMBasicMethod) {
       *iface = const_cast<BasicMethod *>(this);
       MoFEMFunctionReturnHot(0);
     }
     SETERRQ(PETSC_COMM_SELF, MOFEM_DATA_INCONSISTENCY, "unknown interface");
   }

Member Data Documentation

◆ adjacenciesPtr

const FieldEntityEntFiniteElementAdjacencyMap_multiIndex* MoFEM::BasicMethod::adjacenciesPtr

Definition at line 241 of file LoopMethods.hpp.

◆ dofsPtr

const DofEntity_multiIndex* MoFEM::BasicMethod::dofsPtr

Definition at line 238 of file LoopMethods.hpp.

◆ entitiesPtr

const FieldEntity_multiIndex* MoFEM::BasicMethod::entitiesPtr

Definition at line 237 of file LoopMethods.hpp.

◆ fieldsPtr

const Field_multiIndex* MoFEM::BasicMethod::fieldsPtr

Definition at line 236 of file LoopMethods.hpp.

◆ finiteElementsEntitiesPtr

const EntFiniteElement_multiIndex* MoFEM::BasicMethod::finiteElementsEntitiesPtr

Definition at line 240 of file LoopMethods.hpp.

◆ finiteElementsPtr

const FiniteElement_multiIndex* MoFEM::BasicMethod::finiteElementsPtr

Definition at line 239 of file LoopMethods.hpp.

◆ loopSize

int MoFEM::BasicMethod::loopSize

Definition at line 222 of file LoopMethods.hpp.

◆ nInTheLoop

int MoFEM::BasicMethod::nInTheLoop

Definition at line 219 of file LoopMethods.hpp.

◆ operatorHook

boost::function<MoFEMErrorCode()> MoFEM::BasicMethod::operatorHook

Hook function for operator

Definition at line 258 of file LoopMethods.hpp.

◆ postProcessHook

boost::function<MoFEMErrorCode()> MoFEM::BasicMethod::postProcessHook

Hook function for post-processing

Definition at line 253 of file LoopMethods.hpp.

◆ preProcessHook

boost::function<MoFEMErrorCode()> MoFEM::BasicMethod::preProcessHook

Hook function for pre-processing

Definition at line 248 of file LoopMethods.hpp.

◆ problemPtr

const Problem* MoFEM::BasicMethod::problemPtr

Definition at line 235 of file LoopMethods.hpp.

◆ rAnk

int MoFEM::BasicMethod::rAnk

Definition at line 232 of file LoopMethods.hpp.

◆ refinedEntitiesPtr

const RefEntity_multiIndex* MoFEM::BasicMethod::refinedEntitiesPtr

Definition at line 233 of file LoopMethods.hpp.

◆ refinedFiniteElementsPtr

const RefElement_multiIndex* MoFEM::BasicMethod::refinedFiniteElementsPtr

Definition at line 234 of file LoopMethods.hpp.

◆ sIze

int MoFEM::BasicMethod::sIze

Definition at line 232 of file LoopMethods.hpp.

The documentation for this struct was generated from the following files:

src/interfaces/LoopMethods.hpp
src/interfaces/impl/LoopMethods.cpp

Public Member Functions

Public Attributes

Private Member Functions

Additional Inherited Members

Detailed Description

Constructor & Destructor Documentation

◆ BasicMethod()

◆ ~BasicMethod()

Member Function Documentation

◆ copyBasicMethod()

◆ getLoopSize()

◆ getNinTheLoop()

◆ iNit()

◆ operator()()

◆ postProcess()

◆ preProcess()

◆ query_interface()

Member Data Documentation

◆ adjacenciesPtr

◆ dofsPtr

◆ entitiesPtr

◆ fieldsPtr

◆ finiteElementsEntitiesPtr

◆ finiteElementsPtr

◆ loopSize

◆ nInTheLoop

◆ operatorHook

◆ postProcessHook

◆ preProcessHook

◆ problemPtr

◆ rAnk

◆ refinedEntitiesPtr

◆ refinedFiniteElementsPtr

◆ sIze