v0.10.0
Public Member Functions | Public Attributes | List of all members
MoFEM::BitRefManager Struct Reference

Managing BitRefLevels. More...

#include <src/interfaces/BitRefManager.hpp>

Inheritance diagram for MoFEM::BitRefManager:
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Collaboration diagram for MoFEM::BitRefManager:
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Public Member Functions

MoFEMErrorCode query_interface (const MOFEMuuid &uuid, UnknownInterface **iface) const
 
 BitRefManager (const MoFEM::Core &core)
 
virtual ~BitRefManager ()=default
 Destructor. More...
 
- Public Member Functions inherited from MoFEM::UnknownInterface
template<class IFACE >
MoFEMErrorCode registerInterface (const MOFEMuuid &uuid, bool error_if_registration_failed=true)
 Register interface. More...
 
template<class IFACE , bool VERIFY = false>
MoFEMErrorCode getInterface (const MOFEMuuid &uuid, IFACE *&iface) const
 Get interface by uuid and return reference to pointer of interface. More...
 
template<class IFACE >
MoFEMErrorCode getInterface (IFACE *&iface) const
 Get interface refernce to pointer of interface. More...
 
template<class IFACE >
MoFEMErrorCode getInterface (IFACE **const iface) const
 Get interface pointer to pointer of interface. More...
 
template<class IFACE , typename boost::enable_if< boost::is_pointer< IFACE >, int >::type = 0>
IFACE getInterface () const
 Get interface pointer to pointer of interface. More...
 
template<class IFACE , typename boost::enable_if< boost::is_reference< IFACE >, int >::type = 0>
IFACE getInterface () const
 Get reference to interface. More...
 
template<class IFACE >
IFACE * getInterface () const
 Function returning pointer to interface. More...
 
virtual ~UnknownInterface ()=default
 
virtual MoFEMErrorCode getLibVersion (Version &version) const
 Get library version. More...
 
virtual const MoFEMErrorCode getFileVersion (moab::Interface &moab, Version &version) const
 Get database major version. More...
 
virtual MoFEMErrorCode getInterfaceVersion (Version &version) const
 Get database major version. More...
 
template<>
MoFEMErrorCode getInterface (const MOFEMuuid &uuid, UnknownInterface *&iface) const
 

Public Attributes

MoFEM::CorecOre
 
bool dEbug
 

Setting and shifting bits

MoFEMErrorCode setBitRefLevel (const Range &ents, const BitRefLevel bit, const bool only_tets=true, int verb=0) const
 add entities to database and set bit ref levelThis function set bit ref level, add entries to core database and create ref finite elements. Finite elements are create of entities in function argument, whereas all lower dimension entities are added as a field entities More...
 
MoFEMErrorCode setElementsBitRefLevel (const Range &ents, const BitRefLevel bit=BitRefLevel(), int verb=QUIET) const
 add entities to database and set bit ref level More...
 
MoFEMErrorCode setEntitiesBitRefLevel (const Range &ents, const BitRefLevel bit=BitRefLevel(), int verb=QUIET) const
 add entities to database and set bit ref level More...
 
MoFEMErrorCode setFieldEntitiesBitRefLevel (const std::string field_name, const BitRefLevel bit=BitRefLevel(), int verb=QUIET) const
 Set the bit ref level to entities in the field meshset. More...
 
MoFEMErrorCode setBitRefLevelByDim (const EntityHandle meshset, const int dim, const BitRefLevel bit, int verb=QUIET) const
 Set the Bit Ref Level By Dim object. More...
 
MoFEMErrorCode setBitRefLevelByType (const EntityHandle meshset, const EntityType type, const BitRefLevel bit, int verb=QUIET) const
 Set the Bit Ref Level By Type object. More...
 
MoFEMErrorCode setBitLevelToMeshset (const EntityHandle meshset, const BitRefLevel bit, int verb=0) const
 
MoFEMErrorCode addToDatabaseBitRefLevelByType (const EntityType type, const BitRefLevel bit, const BitRefLevel mask=BitRefLevel().set(), int verb=QUIET) const
 Add entities which exist in MoAB database, and have set appropiate BitRef level tag, to multi-indices in MoFEM. More...
 
MoFEMErrorCode addToDatabaseBitRefLevelByDim (const int dim, const BitRefLevel bit, const BitRefLevel mask=BitRefLevel().set(), int verb=QUIET) const
 Add entities which exist in MoAB database, and have set appropiate BitRef level tag, to multi-indices in MoFEM. More...
 
MoFEMErrorCode addBitRefLevel (const Range &ents, const BitRefLevel bit, int verb=QUIET) const
 add bit ref level to ref entity More...
 
MoFEMErrorCode addBitRefLevelByDim (const EntityHandle meshset, const int dim, const BitRefLevel bit, int verb=QUIET) const
 add bit ref level by dimension More...
 
MoFEMErrorCode setNthBitRefLevel (const Range &ents, const int n, const bool b, int verb=0) const
 Set nth bit ref level. More...
 
MoFEMErrorCode setNthBitRefLevel (const int n, const bool b, int verb=0) const
 Set nth bit ref level. More...
 
MoFEMErrorCode shiftLeftBitRef (const int shift, const BitRefLevel mask=BitRefLevel().set(), int verb=-1) const
 left shift bit ref levelthis results of deletion of entities on far left side More...
 
MoFEMErrorCode shiftRightBitRef (const int shift, const BitRefLevel mask=BitRefLevel().set(), int verb=-1) const
 right shift bit ref level More...
 

Entity handlers by bit ref level

MoFEMErrorCode filterEntitiesByRefLevel (const BitRefLevel bit, const BitRefLevel mask, Range &ents, int verb=QUIET) const
 filter entities by bit ref level More...
 
MoFEMErrorCode getEntitiesByTypeAndRefLevel (const BitRefLevel bit, const BitRefLevel mask, const EntityType type, const EntityHandle meshset, int verb=0) const
 add all ents from ref level given by bit to meshset More...
 
MoFEMErrorCode getEntitiesByTypeAndRefLevel (const BitRefLevel bit, const BitRefLevel mask, const EntityType type, Range &ents, int verb=0) const
 add all ents from ref level given by bit to meshset More...
 
MoFEMErrorCode getEntitiesByDimAndRefLevel (const BitRefLevel bit, const BitRefLevel mask, const int dim, const EntityHandle meshset, int verb=0) const
 add all ents from ref level given by bit to meshset More...
 
MoFEMErrorCode getEntitiesByDimAndRefLevel (const BitRefLevel bit, const BitRefLevel mask, const int dim, Range &ents, int verb=0) const
 add all ents from ref level given by bit to meshset More...
 
MoFEMErrorCode getEntitiesByRefLevel (const BitRefLevel bit, const BitRefLevel mask, const EntityHandle meshset, const int verb=QUIET) const
 add all ents from ref level given by bit to meshset More...
 
MoFEMErrorCode getEntitiesByRefLevel (const BitRefLevel bit, const BitRefLevel mask, Range &ents, const int verb=QUIET) const
 add all ents from ref level given by bit to meshset More...
 
MoFEMErrorCode getEntitiesByParentType (const BitRefLevel bit, const BitRefLevel mask, const EntityType type, Range &ents, const int verb=QUIET) const
 get entities by bit ref level and type of parent More...
 
MoFEMErrorCode getAllEntitiesNotInDatabase (Range &ents) const
 Get all entities not in database. More...
 
MoFEMErrorCode filterEntitiesNotInDatabase (Range &ents) const
 Get entities not in database. More...
 

Get adjacencies bit ref level

virtual MoFEMErrorCode getAdjacenciesEquality (const EntityHandle from_entity, const int to_dimension, Range &adj_entities) const
 Get the adjacencies associated with a entity to entities of a specified dimension.bit ref level of adjacent entities is equal to bit ref level of adjacent entities. More...
 
virtual MoFEMErrorCode getAdjacenciesAny (const EntityHandle from_entity, const int to_dimension, Range &adj_entities) const
 Get the adjacencies associated with a entity to entities of a specified dimension.bit ref level of adjacent entities is any of bit ref level of adjacent entities. More...
 
virtual MoFEMErrorCode getAdjacencies (const Problem *problem_ptr, const EntityHandle *from_entities, const int num_entities, const int to_dimension, Range &adj_entities, const int operation_type=moab::Interface::INTERSECT, const int verb=0) const
 Get the adjacencies associated with a entity to entities of a specified dimension.bit ref level of adjacent entities is equal to bit ref level of adjacent entities. More...
 
virtual MoFEMErrorCode getAdjacencies (const BitRefLevel bit, const EntityHandle *from_entities, const int num_entities, const int to_dimension, Range &adj_entities, const int operation_type=moab::Interface::INTERSECT, const int verb=0) const
 Get the adjacencies associated with a entity to entities of a specified dimension.bit ref level of adjacent entities is equal to bit ref level of adjacent entities. More...
 

Update meshsets and ranges by children

MoFEMErrorCode updateMeshsetByEntitiesChildren (const EntityHandle parent, const BitRefLevel &parent_bit, const BitRefLevel &parent_mask, const BitRefLevel &child_bit, const BitRefLevel &child_mask, const EntityHandle child, EntityType child_type, const bool recursive=false, int verb=0)
 Get child entities form meshset containing parent entitiesSearch for refined entities of given type whose parent are entities in the parent meshset. It can be used for example to transfer information about boundary conditions to refined mesh or split mesh by interface elements. It is used by function refine_MESHSET, to update MESHSET finite elements. More...
 
MoFEMErrorCode updateMeshsetByEntitiesChildren (const EntityHandle parent, const BitRefLevel &child_bit, const EntityHandle child, EntityType child_type, const bool recursive=false, int verb=0)
 Get child entities form meshset containing parent entities. More...
 
MoFEMErrorCode updateFieldMeshsetByEntitiesChildren (const BitRefLevel &child_bit, int verb=0)
 update fields meshesets by child entities More...
 
MoFEMErrorCode updateFieldMeshsetByEntitiesChildren (const std::string name, const BitRefLevel &child_bit, int verb=0)
 update field meshset by child entities More...
 
MoFEMErrorCode updateFiniteElementMeshsetByEntitiesChildren (const std::string name, const BitRefLevel &child_bit, const EntityType fe_ent_type, int verb=0)
 update finite element meshset by child entities More...
 
MoFEMErrorCode updateRange (const Range &parent, Range &child, MoFEMTypes bh=MF_ZERO)
 Update range by prents. More...
 

Writting files

MoFEMErrorCode writeBitLevelByType (const BitRefLevel bit, const BitRefLevel mask, const EntityType type, const char *file_name, const char *file_type, const char *options, const bool check_for_empty=true) const
 Write bit ref level to file. More...
 
MoFEMErrorCode writeEntitiesNotInDatabase (const char *file_name, const char *file_type, const char *options, const bool check_for_empty=true) const
 Write ents not in database. More...
 
MoFEMErrorCode writeEntitiesAllBitLevelsByType (const BitRefLevel mask, const EntityType type, const char *file_name, const char *file_type, const char *options)
 Write all entities by bit levels and type. More...
 

Additional Inherited Members

- Protected Member Functions inherited from MoFEM::UnknownInterface
boost::typeindex::type_index getClassIdx (const MOFEMuuid &uid) const
 Get type name for interface Id. More...
 
MOFEMuuid getUId (const boost::typeindex::type_index &class_idx) const
 Get interface Id for class name. More...
 

Detailed Description

Managing BitRefLevels.

Examples
bernstein_bezier_generate_base.cpp, build_large_problem.cpp, build_problems.cpp, continuity_check_on_contact_prism_side_ele.cpp, continuity_check_on_skeleton_3d.cpp, dm_build_partitioned_mesh.cpp, dm_create_subdm.cpp, dm_partitioned_no_field.cpp, elasticity.cpp, elasticity_mixed_formulation.cpp, ep.cpp, field_axpy_atom_test.cpp, field_to_vertices.cpp, forces_and_sources_testing_edge_element.cpp, forces_and_sources_testing_flat_prism_element.cpp, forces_and_sources_testing_users_base.cpp, hcurl_divergence_operator_2d.cpp, mesh_cut.cpp, mesh_insert_interface_atom.cpp, mesh_smoothing.cpp, minimal_surface_area.cpp, prism_elements_from_surface.cpp, prism_polynomial_approximation.cpp, quad_polynomial_approximation.cpp, Remodeling.cpp, remove_entities_from_problem.cpp, simple_contact.cpp, split_sideset.cpp, test_jacobian_of_simple_contact_element.cpp, and unsaturated_transport.cpp.

Definition at line 34 of file BitRefManager.hpp.

Constructor & Destructor Documentation

◆ BitRefManager()

MoFEM::BitRefManager::BitRefManager ( const MoFEM::Core core)

Definition at line 34 of file BitRefManager.cpp.

35  : cOre(const_cast<MoFEM::Core &>(core)), dEbug(false) {
36 
37  try {
38  MoFEM::LogManager::getLog("BitRefSelf");
39  } catch (...) {
40  auto core_log = logging::core::get();
41  core_log->add_sink(
43  LogManager::setLog("BitRefSelf");
44  core_log->add_sink(
46  LogManager::setLog("BitRefWorld");
47  core_log->add_sink(
49  LogManager::setLog("BitRefSync");
50  MOFEM_LOG_TAG("BitRefSelf", "BitRefManager");
51  MOFEM_LOG_TAG("BitRefWorld", "BitRefManager");
52  MOFEM_LOG_TAG("BitRefSync", "BitRefManager");
53  }
54 
56  MOFEM_LOG("BitRefWorld", Sev::noisy) << "BitRefManager interface created";
57 }
static boost::shared_ptr< std::ostream > getStrmWorld()
Get the strm world object.
Definition: LogManager.cpp:322
#define MOFEM_LOG_TAG(channel, tag)
Tag channelTag channel tag is set until MOFEM_LOG_CHANNEL is called, then new tag can be set.
Definition: LogManager.hpp:334
#define MOFEM_LOG(channel, severity)
Log.
Definition: LogManager.hpp:303
static boost::shared_ptr< std::ostream > getStrmSelf()
Get the strm self object.
Definition: LogManager.cpp:318
static boost::shared_ptr< SinkType > createSink(boost::shared_ptr< std::ostream > stream_ptr, std::string comm_filter)
Create a sink object.
Definition: LogManager.cpp:278
static LoggerType & setLog(const std::string channel)
Set ans resset chanel logger.
Definition: LogManager.cpp:363
static boost::shared_ptr< std::ostream > getStrmSync()
Get the strm sync object.
Definition: LogManager.cpp:326
static LoggerType & getLog(const std::string channel)
Get logger by channel.
Definition: LogManager.cpp:369
#define MOFEM_LOG_FUNCTION()
Set scopeMacro for function scope markup. The scope name is constructed with help of compiler and con...
Definition: LogManager.hpp:320

◆ ~BitRefManager()

virtual MoFEM::BitRefManager::~BitRefManager ( )
virtualdefault

Destructor.

Member Function Documentation

◆ filterEntitiesByRefLevel()

MoFEMErrorCode MoFEM::BitRefManager::filterEntitiesByRefLevel ( const BitRefLevel  bit,
const BitRefLevel  mask,
Range &  ents,
int  verb = QUIET 
) const

filter entities by bit ref level

Parameters
bit
mask
ents
QUIET
Returns
MoFEMErrorCode

Definition at line 644 of file BitRefManager.cpp.

647  {
648  MoFEM::Interface &m_field = cOre;
649  moab::Interface &moab(m_field.get_moab());
651 
652  std::vector<EntityHandle> ents_vec;
653  ents_vec.reserve(ents.size());
654 
655  std::vector<BitRefLevel *> tags_bits_ptr_vec(ents.size());
656 
657  Range swap_ents;
658  auto hint = swap_ents.begin();
659 
660  for (Range::pair_iterator p_eit = ents.pair_begin(); p_eit != ents.pair_end();
661  ++p_eit) {
662 
663  EntityHandle f = p_eit->first;
664  const EntityHandle s = p_eit->second;
665 
666  // get bits on entities
667  rval = moab.tag_get_by_ptr(cOre.get_th_RefBitLevel(), Range(f, s),
668  (const void **)(&*tags_bits_ptr_vec.begin()));
669 
670  if (rval == MB_SUCCESS) {
671 
672  auto bit_it = tags_bits_ptr_vec.begin();
673 
674  auto check = [&bit, &mask](const auto &entity_bit) -> bool {
675  return
676 
677  (entity_bit & bit).any() &&
678 
679  ((entity_bit & mask) == entity_bit);
680  };
681 
682  while (f != s + 1) {
683 
684  while (f != s + 1 && !check(**bit_it)) {
685  ++bit_it;
686  ++f;
687  }
688 
689  if (f != s + 1) {
690 
691  const EntityHandle start = f;
692 
693  while (f != (s + 1) && check(**bit_it)) {
694  ++bit_it;
695  ++f;
696  };
697 
698  hint = swap_ents.insert(hint, start, f - 1);
699  }
700  }
701  }
702  }
703 
704  ents.swap(swap_ents);
705 
707 }
Deprecated interface functions.
virtual moab::Interface & get_moab()=0
Tag get_th_RefBitLevel() const
Definition: Core.hpp:193
#define MoFEMFunctionBeginHot
First executable line of each MoFEM function, used for error handling. Final line of MoFEM functions ...
Definition: definitions.h:509
#define MoFEMFunctionReturnHot(a)
Last executable line of each PETSc function used for error handling. Replaces return()
Definition: definitions.h:516
static MoFEMErrorCodeGeneric< moab::ErrorCode > rval
Definition: Exceptions.hpp:85
DeprecatedCoreInterface Interface
Definition: Interface.hpp:1943

◆ filterEntitiesNotInDatabase()

MoFEMErrorCode MoFEM::BitRefManager::filterEntitiesNotInDatabase ( Range &  ents) const

Get entities not in database.

Parameters
ents
Returns
MoFEMErrorCode

Definition at line 805 of file BitRefManager.cpp.

805  {
806  MoFEM::Interface &m_field = cOre;
807  auto ref_ents_ptr = m_field.get_ref_ents();
809  auto eit = ents.begin();
810  for (; eit != ents.end();) {
811  auto rit = ref_ents_ptr->get<Ent_mi_tag>().find(*eit);
812  if (rit != ref_ents_ptr->get<Ent_mi_tag>().end()) {
813  eit = ents.erase(eit);
814  } else {
815  eit++;
816  }
817  }
819 }
Deprecated interface functions.
#define MoFEMFunctionBeginHot
First executable line of each MoFEM function, used for error handling. Final line of MoFEM functions ...
Definition: definitions.h:509
virtual const RefEntity_multiIndex * get_ref_ents() const =0
Get the ref ents object.
#define MoFEMFunctionReturnHot(a)
Last executable line of each PETSc function used for error handling. Replaces return()
Definition: definitions.h:516

◆ getAllEntitiesNotInDatabase()

MoFEMErrorCode MoFEM::BitRefManager::getAllEntitiesNotInDatabase ( Range &  ents) const

Get all entities not in database.

Parameters
ents
Returns
MoFEMErrorCode

Definition at line 795 of file BitRefManager.cpp.

795  {
796  MoFEM::Interface &m_field = cOre;
797  moab::Interface &moab = m_field.get_moab();
799  CHKERR moab.get_entities_by_handle(0, ents, false);
800  ents = subtract(ents, ents.subset_by_type(MBENTITYSET));
803 }
Deprecated interface functions.
virtual moab::Interface & get_moab()=0
#define MoFEMFunctionReturn(a)
Last executable line of each PETSc function used for error handling. Replaces return()
Definition: definitions.h:485
#define CHKERR
Inline error check.
Definition: definitions.h:604
DeprecatedCoreInterface Interface
Definition: Interface.hpp:1943
#define MoFEMFunctionBegin
First executable line of each MoFEM function, used for error handling. Final line of MoFEM functions ...
Definition: definitions.h:415
MoFEMErrorCode filterEntitiesNotInDatabase(Range &ents) const
Get entities not in database.

◆ getEntitiesByParentType()

MoFEMErrorCode MoFEM::BitRefManager::getEntitiesByParentType ( const BitRefLevel  bit,
const BitRefLevel  mask,
const EntityType  type,
Range &  ents,
const int  verb = QUIET 
) const

get entities by bit ref level and type of parent

Note
Entities have to be added to MoFEM database
Parameters
BitRefLevelbitLevel
BitRefLevelmask
typeof parent
entsreturned ents
Returns
error code

Definition at line 771 of file BitRefManager.cpp.

775  {
776  MoFEM::Interface &m_field = cOre;
777  auto ref_ents_ptr = m_field.get_ref_ents();
779  auto &ref_ents = ref_ents_ptr->get<Ent_Ent_mi_tag>();
780  auto it = ref_ents.lower_bound(get_id_for_min_type(type));
781  auto hi_it = ref_ents.upper_bound(get_id_for_max_type(type));
782  std::vector<EntityHandle> ents_vec;
783  ents_vec.reserve(std::distance(it, hi_it));
784  for (; it != hi_it; it++) {
785  const BitRefLevel &ent_bit = it->get()->getBitRefLevel();
786  if ((ent_bit & mask) == ent_bit && (ent_bit & bit).any())
787  ents_vec.emplace_back(it->get()->getEnt());
788  }
789  ents.insert_list(ents_vec.begin(), ents_vec.end());
790  if (verb > NOISY)
791  cerr << "getEntitiesByParentType: " << ents << endl;
793 }
EntityHandle get_id_for_max_type()
EntityHandle get_id_for_min_type()
Deprecated interface functions.
#define MoFEMFunctionReturn(a)
Last executable line of each PETSc function used for error handling. Replaces return()
Definition: definitions.h:485
virtual const RefEntity_multiIndex * get_ref_ents() const =0
Get the ref ents object.
std::bitset< BITREFLEVEL_SIZE > BitRefLevel
Bit structure attached to each entity identifying to what mesh entity is attached.
Definition: Types.hpp:51
#define MoFEMFunctionBegin
First executable line of each MoFEM function, used for error handling. Final line of MoFEM functions ...
Definition: definitions.h:415

◆ query_interface()

MoFEMErrorCode MoFEM::BitRefManager::query_interface ( const MOFEMuuid uuid,
UnknownInterface **  iface 
) const
virtual

Implements MoFEM::UnknownInterface.

Definition at line 22 of file BitRefManager.cpp.

23  {
25  *iface = NULL;
26  if (uuid == IDD_MOFEMBitRefManager) {
27  *iface = const_cast<BitRefManager *>(this);
29  }
30  SETERRQ(PETSC_COMM_SELF, MOFEM_DATA_INCONSISTENCY, "unknown interface");
32 }
#define MoFEMFunctionBeginHot
First executable line of each MoFEM function, used for error handling. Final line of MoFEM functions ...
Definition: definitions.h:509
static const MOFEMuuid IDD_MOFEMBitRefManager
#define MoFEMFunctionReturnHot(a)
Last executable line of each PETSc function used for error handling. Replaces return()
Definition: definitions.h:516

◆ writeBitLevelByType()

MoFEMErrorCode MoFEM::BitRefManager::writeBitLevelByType ( const BitRefLevel  bit,
const BitRefLevel  mask,
const EntityType  type,
const char *  file_name,
const char *  file_type,
const char *  options,
const bool  check_for_empty = true 
) const

Write bit ref level to file.

Parameters
bitbit ref level
maskmask of bit ref level
typetype of entity
file_namefile name (see moab documentation)
file_typefile type (see moab documentation)
optionsfile options (see moab documentation)
Returns
error code

Definition at line 583 of file BitRefManager.cpp.

586  {
587  MoFEM::Interface &m_field = cOre;
588  moab::Interface &moab(m_field.get_moab());
590  Range ents;
591  CHKERR getEntitiesByTypeAndRefLevel(bit, mask, type, ents);
592  if (check_for_empty && ents.empty())
594  EntityHandle meshset;
595  CHKERR moab.create_meshset(MESHSET_SET, meshset);
596  CHKERR moab.add_entities(meshset, ents);
597  CHKERR moab.write_file(file_name, file_type, options, &meshset, 1);
598  CHKERR moab.delete_entities(&meshset, 1);
600 }
Deprecated interface functions.
virtual moab::Interface & get_moab()=0
MoFEMErrorCode getEntitiesByTypeAndRefLevel(const BitRefLevel bit, const BitRefLevel mask, const EntityType type, const EntityHandle meshset, int verb=0) const
add all ents from ref level given by bit to meshset
#define MoFEMFunctionReturn(a)
Last executable line of each PETSc function used for error handling. Replaces return()
Definition: definitions.h:485
#define MoFEMFunctionReturnHot(a)
Last executable line of each PETSc function used for error handling. Replaces return()
Definition: definitions.h:516
#define CHKERR
Inline error check.
Definition: definitions.h:604
DeprecatedCoreInterface Interface
Definition: Interface.hpp:1943
#define MoFEMFunctionBegin
First executable line of each MoFEM function, used for error handling. Final line of MoFEM functions ...
Definition: definitions.h:415

◆ writeEntitiesAllBitLevelsByType()

MoFEMErrorCode MoFEM::BitRefManager::writeEntitiesAllBitLevelsByType ( const BitRefLevel  mask,
const EntityType  type,
const char *  file_name,
const char *  file_type,
const char *  options 
)

Write all entities by bit levels and type.

Parameters
mask
type
file_name
file_type
options
Returns
MoFEMErrorCode

Definition at line 620 of file BitRefManager.cpp.

622  {
624  for (int ll = 0; ll != BITREFLEVEL_SIZE; ++ll) {
625  std::string name = boost::lexical_cast<std::string>(ll) + "_" + file_name;
626  CHKERR writeBitLevelByType(BitRefLevel().set(ll), mask, type, name.c_str(),
627  file_type, options, true);
628  }
630 }
#define MoFEMFunctionReturn(a)
Last executable line of each PETSc function used for error handling. Replaces return()
Definition: definitions.h:485
#define BITREFLEVEL_SIZE
max number of refinements
Definition: definitions.h:286
#define CHKERR
Inline error check.
Definition: definitions.h:604
MoFEMErrorCode writeBitLevelByType(const BitRefLevel bit, const BitRefLevel mask, const EntityType type, const char *file_name, const char *file_type, const char *options, const bool check_for_empty=true) const
Write bit ref level to file.
std::bitset< BITREFLEVEL_SIZE > BitRefLevel
Bit structure attached to each entity identifying to what mesh entity is attached.
Definition: Types.hpp:51
#define MoFEMFunctionBegin
First executable line of each MoFEM function, used for error handling. Final line of MoFEM functions ...
Definition: definitions.h:415

◆ writeEntitiesNotInDatabase()

MoFEMErrorCode MoFEM::BitRefManager::writeEntitiesNotInDatabase ( const char *  file_name,
const char *  file_type,
const char *  options,
const bool  check_for_empty = true 
) const

Write ents not in database.

Parameters
file_name
file_typefor example "VTK"
options
check_for_empty
Returns
MoFEMErrorCode

Definition at line 602 of file BitRefManager.cpp.

604  {
605  MoFEM::Interface &m_field = cOre;
606  moab::Interface &moab(m_field.get_moab());
608  EntityHandle meshset;
609  Range ents;
611  if (check_for_empty && ents.empty())
613  CHKERR moab.create_meshset(MESHSET_SET, meshset);
614  CHKERR moab.add_entities(meshset, ents);
615  CHKERR moab.write_file(file_name, file_type, options, &meshset, 1);
616  CHKERR moab.delete_entities(&meshset, 1);
618 }
Deprecated interface functions.
virtual moab::Interface & get_moab()=0
#define MoFEMFunctionReturn(a)
Last executable line of each PETSc function used for error handling. Replaces return()
Definition: definitions.h:485
#define MoFEMFunctionReturnHot(a)
Last executable line of each PETSc function used for error handling. Replaces return()
Definition: definitions.h:516
#define CHKERR
Inline error check.
Definition: definitions.h:604
DeprecatedCoreInterface Interface
Definition: Interface.hpp:1943
#define MoFEMFunctionBegin
First executable line of each MoFEM function, used for error handling. Final line of MoFEM functions ...
Definition: definitions.h:415
MoFEMErrorCode getAllEntitiesNotInDatabase(Range &ents) const
Get all entities not in database.

Member Data Documentation

◆ cOre

MoFEM::Core& MoFEM::BitRefManager::cOre

Definition at line 39 of file BitRefManager.hpp.

◆ dEbug

bool MoFEM::BitRefManager::dEbug

Definition at line 40 of file BitRefManager.hpp.


The documentation for this struct was generated from the following files: