v0.13.1
Public Member Functions | Public Attributes | List of all members
MoFEM::BitRefManager Struct Reference

Managing BitRefLevels. More...

#include <src/interfaces/BitRefManager.hpp>

Inheritance diagram for MoFEM::BitRefManager:
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Collaboration diagram for MoFEM::BitRefManager:
[legend]

Public Member Functions

MoFEMErrorCode query_interface (boost::typeindex::type_index type_index, UnknownInterface **iface) const
 
 BitRefManager (const MoFEM::Core &core)
 
virtual ~BitRefManager ()=default
 Destructor. More...
 
- Public Member Functions inherited from MoFEM::UnknownInterface
virtual MoFEMErrorCode query_interface (boost::typeindex::type_index type_index, UnknownInterface **iface) const =0
 
template<class IFACE >
MoFEMErrorCode registerInterface (bool error_if_registration_failed=true)
 Register interface. More...
 
template<class IFACE >
MoFEMErrorCode getInterface (IFACE *&iface) const
 Get interface refernce to pointer of interface. More...
 
template<class IFACE >
MoFEMErrorCode getInterface (IFACE **const iface) const
 Get interface pointer to pointer of interface. More...
 
template<class IFACE , typename boost::enable_if< boost::is_pointer< IFACE >, int >::type = 0>
IFACE getInterface () const
 Get interface pointer to pointer of interface. More...
 
template<class IFACE , typename boost::enable_if< boost::is_reference< IFACE >, int >::type = 0>
IFACE getInterface () const
 Get reference to interface. More...
 
template<class IFACE >
IFACE * getInterface () const
 Function returning pointer to interface. More...
 
virtual ~UnknownInterface ()=default
 

Public Attributes

MoFEM::CorecOre
 
bool dEbug
 

Setting and shifting bits

MoFEMErrorCode setBitRefLevel (const Range &ents, const BitRefLevel bit, const bool only_tets=true, int verb=0, Range *adj_ents_ptr=nullptr) const
 add entities to database and set bit ref level More...
 
MoFEMErrorCode setElementsBitRefLevel (const Range &ents, const BitRefLevel bit=BitRefLevel(), int verb=QUIET) const
 add entities to database and set bit ref level More...
 
MoFEMErrorCode setEntitiesBitRefLevel (const Range &ents, const BitRefLevel bit=BitRefLevel(), int verb=QUIET) const
 add entities to database and set bit ref level More...
 
MoFEMErrorCode setFieldEntitiesBitRefLevel (const std::string field_name, const BitRefLevel bit=BitRefLevel(), int verb=QUIET) const
 Set the bit ref level to entities in the field meshset. More...
 
MoFEMErrorCode setBitRefLevelByDim (const EntityHandle meshset, const int dim, const BitRefLevel bit, int verb=QUIET) const
 Set the Bit Ref Level By Dim object. More...
 
MoFEMErrorCode setBitRefLevelByType (const EntityHandle meshset, const EntityType type, const BitRefLevel bit, int verb=QUIET) const
 Set the Bit Ref Level By Type object. More...
 
MoFEMErrorCode setBitLevelToMeshset (const EntityHandle meshset, const BitRefLevel bit, int verb=0) const
 
MoFEMErrorCode addToDatabaseBitRefLevelByType (const EntityType type, const BitRefLevel bit, const BitRefLevel mask=BitRefLevel().set(), int verb=QUIET) const
 Add entities which exist in MoAB database, and have set appropiate BitRef level tag, to multi-indices in MoFEM. More...
 
MoFEMErrorCode addToDatabaseBitRefLevelByDim (const int dim, const BitRefLevel bit, const BitRefLevel mask=BitRefLevel().set(), int verb=QUIET) const
 Add entities which exist in MoAB database, and have set appropiate BitRef level tag, to multi-indices in MoFEM. More...
 
MoFEMErrorCode addBitRefLevel (const Range &ents, const BitRefLevel bit, int verb=QUIET) const
 add bit ref level to ref entity More...
 
MoFEMErrorCode addBitRefLevelByDim (const EntityHandle meshset, const int dim, const BitRefLevel bit, int verb=QUIET) const
 add bit ref level by dimension More...
 
MoFEMErrorCode setNthBitRefLevel (const Range &ents, const int n, const bool b, int verb=QUIET) const
 Set nth bit ref level. More...
 
MoFEMErrorCode setNthBitRefLevel (const int n, const bool b, int verb=QUIET) const
 Set nth bit ref level to all entities in databse. More...
 
MoFEMErrorCode shiftLeftBitRef (const int shift, const BitRefLevel mask=BitRefLevel().set(), int verb=DEFAULT_VERBOSITY) const
 left shift bit ref levelthis results of deletion of entities on far left side More...
 
MoFEMErrorCode shiftRightBitRef (const int shift, const BitRefLevel mask=BitRefLevel().set(), int verb=DEFAULT_VERBOSITY, MoFEMTypes mf=MF_ZERO) const
 right shift bit ref level More...
 

Entity handlers by bit ref level

MoFEMErrorCode filterEntitiesByRefLevel (const BitRefLevel bit, const BitRefLevel mask, Range &ents, int verb=QUIET) const
 filter entities by bit ref level More...
 
MoFEMErrorCode getEntitiesByTypeAndRefLevel (const BitRefLevel bit, const BitRefLevel mask, const EntityType type, const EntityHandle meshset, int verb=0) const
 add all ents from ref level given by bit to meshset More...
 
MoFEMErrorCode getEntitiesByTypeAndRefLevel (const BitRefLevel bit, const BitRefLevel mask, const EntityType type, Range &ents, int verb=0) const
 add all ents from ref level given by bit to meshset More...
 
MoFEMErrorCode getEntitiesByDimAndRefLevel (const BitRefLevel bit, const BitRefLevel mask, const int dim, const EntityHandle meshset, int verb=0) const
 add all ents from ref level given by bit to meshset More...
 
MoFEMErrorCode getEntitiesByDimAndRefLevel (const BitRefLevel bit, const BitRefLevel mask, const int dim, Range &ents, int verb=0) const
 add all ents from ref level given by bit to meshset More...
 
MoFEMErrorCode getEntitiesByRefLevel (const BitRefLevel bit, const BitRefLevel mask, const EntityHandle meshset, const int verb=QUIET) const
 add all ents from ref level given by bit to meshset More...
 
MoFEMErrorCode getEntitiesByRefLevel (const BitRefLevel bit, const BitRefLevel mask, Range &ents, const int verb=QUIET) const
 add all ents from ref level given by bit to meshset More...
 
MoFEMErrorCode getEntitiesByParentType (const BitRefLevel bit, const BitRefLevel mask, const EntityType type, Range &ents, const int verb=QUIET) const
 get entities by bit ref level and type of parent More...
 
MoFEMErrorCode getAllEntitiesNotInDatabase (Range &ents) const
 Get all entities not in database. More...
 
MoFEMErrorCode filterEntitiesNotInDatabase (Range &ents) const
 Get entities not in database. More...
 

Get adjacencies bit ref level

virtual MoFEMErrorCode getAdjacenciesEquality (const EntityHandle from_entity, const int to_dimension, Range &adj_entities) const
 Get the adjacencies associated with a entity to entities of a specified dimension. More...
 
virtual MoFEMErrorCode getAdjacenciesAny (const EntityHandle from_entity, const int to_dimension, Range &adj_entities) const
 Get the adjacencies associated with a entity to entities of a specified dimension. More...
 
virtual MoFEMErrorCode getAdjacencies (const Problem *problem_ptr, const EntityHandle *from_entities, const int num_entities, const int to_dimension, Range &adj_entities, const int operation_type=moab::Interface::INTERSECT, const int verb=0) const
 Get the adjacencies associated with a entity to entities of a specified dimension. More...
 
virtual MoFEMErrorCode getAdjacencies (const BitRefLevel bit, const EntityHandle *from_entities, const int num_entities, const int to_dimension, Range &adj_entities, const int operation_type=moab::Interface::INTERSECT, const int verb=0) const
 Get the adjacencies associated with a entity to entities of a specified dimension. More...
 

Update meshsets and ranges by children

MoFEMErrorCode updateMeshsetByEntitiesChildren (const EntityHandle parent, const BitRefLevel &parent_bit, const BitRefLevel &parent_mask, const BitRefLevel &child_bit, const BitRefLevel &child_mask, const EntityHandle child, EntityType child_type, const bool recursive=false, int verb=0)
 Get child entities form meshset containing parent entities. More...
 
MoFEMErrorCode updateMeshsetByEntitiesChildren (const EntityHandle parent, const BitRefLevel &child_bit, const EntityHandle child, EntityType child_type, const bool recursive=false, int verb=0)
 Get child entities form meshset containing parent entities. More...
 
MoFEMErrorCode updateFieldMeshsetByEntitiesChildren (const BitRefLevel &child_bit, int verb=0)
 update fields meshesets by child entities More...
 
MoFEMErrorCode updateFieldMeshsetByEntitiesChildren (const std::string name, const BitRefLevel &child_bit, int verb=0)
 update field meshset by child entities More...
 
MoFEMErrorCode updateFiniteElementMeshsetByEntitiesChildren (const std::string name, const BitRefLevel &child_bit, const EntityType fe_ent_type, int verb=0)
 update finite element meshset by child entities More...
 
MoFEMErrorCode updateRangeByChildren (const Range &parent, Range &child, MoFEMTypes bh=MF_ZERO)
 Update range by childresn. More...
 
MoFEMErrorCode updateRangeByParent (const Range &parent, Range &child, MoFEMTypes bh=MF_ZERO)
 Update range by prents. More...
 
DEPRECATED MoFEMErrorCode updateRange (const Range &parent, Range &child, MoFEMTypes bh=MF_ZERO)
 

Writting files

MoFEMErrorCode writeBitLevel (const BitRefLevel bit, const BitRefLevel mask, const char *file_name, const char *file_type, const char *options, const bool check_for_empty=true) const
 Write bit ref level to file. More...
 
MoFEMErrorCode writeBitLevelByDim (const BitRefLevel bit, const BitRefLevel mask, const int dim, const char *file_name, const char *file_type, const char *options, const bool check_for_empty=true) const
 Write bit ref level to file. More...
 
MoFEMErrorCode writeBitLevelByType (const BitRefLevel bit, const BitRefLevel mask, const EntityType type, const char *file_name, const char *file_type, const char *options, const bool check_for_empty=true) const
 Write bit ref level to file. More...
 
MoFEMErrorCode writeEntitiesNotInDatabase (const char *file_name, const char *file_type, const char *options, const bool check_for_empty=true) const
 Write ents not in database. More...
 
MoFEMErrorCode writeEntitiesAllBitLevelsByType (const BitRefLevel mask, const EntityType type, const char *file_name, const char *file_type, const char *options)
 Write all entities by bit levels and type. More...
 

Get tag handles to data on the mesh

Tag get_th_RefParentHandle () const
 
Tag get_th_RefBitLevel () const
 

Additional Inherited Members

- Static Public Member Functions inherited from MoFEM::UnknownInterface
static MoFEMErrorCode getLibVersion (Version &version)
 Get library version. More...
 
static MoFEMErrorCode getFileVersion (moab::Interface &moab, Version &version)
 Get database major version. More...
 
static MoFEMErrorCode setFileVersion (moab::Interface &moab, Version version=Version(MoFEM_VERSION_MAJOR, MoFEM_VERSION_MINOR, MoFEM_VERSION_BUILD))
 Get database major version. More...
 
static MoFEMErrorCode getInterfaceVersion (Version &version)
 Get database major version. More...
 

Detailed Description

Managing BitRefLevels.

Examples
Remodeling.cpp, bernstein_bezier_generate_base.cpp, build_large_problem.cpp, build_problems.cpp, child_and_parent.cpp, continuity_check_on_contact_prism_side_ele.cpp, continuity_check_on_skeleton_3d.cpp, dm_build_partitioned_mesh.cpp, dm_create_subdm.cpp, dm_partitioned_no_field.cpp, elasticity.cpp, elasticity_mixed_formulation.cpp, ep.cpp, field_blas.cpp, field_to_vertices.cpp, forces_and_sources_testing_edge_element.cpp, forces_and_sources_testing_flat_prism_element.cpp, forces_and_sources_testing_users_base.cpp, hanging_node_approx.cpp, hcurl_divergence_operator_2d.cpp, mesh_cut.cpp, mesh_insert_interface_atom.cpp, mesh_smoothing.cpp, minimal_surface_area.cpp, navier_stokes.cpp, nonlinear_dynamics.cpp, plot_base.cpp, prism_elements_from_surface.cpp, prism_polynomial_approximation.cpp, quad_polynomial_approximation.cpp, remove_entities_from_problem.cpp, remove_entities_from_problem_not_partitioned.cpp, simple_contact.cpp, simple_contact_thermal.cpp, split_sideset.cpp, test_jacobian_of_simple_contact_element.cpp, and unsaturated_transport.cpp.

Definition at line 31 of file BitRefManager.hpp.

Constructor & Destructor Documentation

◆ BitRefManager()

MoFEM::BitRefManager::BitRefManager ( const MoFEM::Core core)

Definition at line 30 of file BitRefManager.cpp.

31 : cOre(const_cast<MoFEM::Core &>(core)), dEbug(false) {
32
33 if (!LogManager::checkIfChannelExist("BitRefSelf")) {
34 auto core_log = logging::core::get();
35 core_log->add_sink(
37 LogManager::setLog("BitRefSelf");
38 core_log->add_sink(
40 LogManager::setLog("BitRefWorld");
41 core_log->add_sink(
43 LogManager::setLog("BitRefSync");
44 MOFEM_LOG_TAG("BitRefSelf", "BitRefManager");
45 MOFEM_LOG_TAG("BitRefWorld", "BitRefManager");
46 MOFEM_LOG_TAG("BitRefSync", "BitRefManager");
47 }
48
50 MOFEM_LOG("BitRefWorld", Sev::noisy) << "BitRefManager interface created";
51}
static LoggerType & setLog(const std::string channel)
Set ans resset chanel logger.
Definition: LogManager.cpp:364
#define MOFEM_LOG(channel, severity)
Log.
Definition: LogManager.hpp:311
#define MOFEM_LOG_TAG(channel, tag)
Tag channel.
Definition: LogManager.hpp:342
#define MOFEM_LOG_FUNCTION()
Set scope.
Definition: LogManager.hpp:328
Core (interface) class.
Definition: Core.hpp:92
static boost::shared_ptr< SinkType > createSink(boost::shared_ptr< std::ostream > stream_ptr, std::string comm_filter)
Create a sink object.
Definition: LogManager.cpp:279
static boost::shared_ptr< std::ostream > getStrmWorld()
Get the strm world object.
Definition: LogManager.cpp:323
static boost::shared_ptr< std::ostream > getStrmSync()
Get the strm sync object.
Definition: LogManager.cpp:327
static bool checkIfChannelExist(const std::string channel)
Check if channel exist.
Definition: LogManager.cpp:374
static boost::shared_ptr< std::ostream > getStrmSelf()
Get the strm self object.
Definition: LogManager.cpp:319

◆ ~BitRefManager()

virtual MoFEM::BitRefManager::~BitRefManager ( )
virtualdefault

Destructor.

Member Function Documentation

◆ filterEntitiesByRefLevel()

MoFEMErrorCode MoFEM::BitRefManager::filterEntitiesByRefLevel ( const BitRefLevel  bit,
const BitRefLevel  mask,
Range &  ents,
int  verb = QUIET 
) const

filter entities by bit ref level

Parameters
bit
mask
ents
QUIET
Returns
MoFEMErrorCode
Examples
hanging_node_approx.cpp.

Definition at line 753 of file BitRefManager.cpp.

756 {
757 MoFEM::Interface &m_field = cOre;
758 moab::Interface &moab(m_field.get_moab());
760
761 std::vector<EntityHandle> ents_vec;
762 ents_vec.reserve(ents.size());
763
764 std::vector<BitRefLevel *> tags_bits_ptr_vec(ents.size());
765
766 Range swap_ents;
767 auto hint = swap_ents.begin();
768
769 for (Range::pair_iterator p_eit = ents.pair_begin(); p_eit != ents.pair_end();
770 ++p_eit) {
771
772 EntityHandle f = p_eit->first;
773 const EntityHandle s = p_eit->second;
774
775 // get bits on entities
776 rval = moab.tag_get_by_ptr(cOre.get_th_RefBitLevel(), Range(f, s),
777 (const void **)(&*tags_bits_ptr_vec.begin()));
778
779 if (rval == MB_SUCCESS) {
780
781 auto bit_it = tags_bits_ptr_vec.begin();
782
783 auto check = [&bit, &mask](const auto &entity_bit) -> bool {
784 return
785
786 (entity_bit & bit).any() &&
787
788 ((entity_bit & mask) == entity_bit);
789 };
790
791 while (f != s + 1) {
792
793 while (f != s + 1 && !check(**bit_it)) {
794 ++bit_it;
795 ++f;
796 }
797
798 if (f != s + 1) {
799
800 const EntityHandle start = f;
801
802 while (f != (s + 1) && check(**bit_it)) {
803 ++bit_it;
804 ++f;
805 };
806
807 hint = swap_ents.insert(hint, start, f - 1);
808 }
809 }
810 }
811 }
812
813 ents.swap(swap_ents);
814
816}
#define MoFEMFunctionReturnHot(a)
Last executable line of each PETSc function used for error handling. Replaces return()
Definition: definitions.h:460
#define MoFEMFunctionBeginHot
First executable line of each MoFEM function, used for error handling. Final line of MoFEM functions ...
Definition: definitions.h:453
auto bit
set bit
static MoFEMErrorCodeGeneric< moab::ErrorCode > rval
Definition: Exceptions.hpp:85
DeprecatedCoreInterface Interface
Definition: Interface.hpp:1965
virtual moab::Interface & get_moab()=0
Tag get_th_RefBitLevel() const
Definition: Core.hpp:208
Deprecated interface functions.

◆ filterEntitiesNotInDatabase()

MoFEMErrorCode MoFEM::BitRefManager::filterEntitiesNotInDatabase ( Range &  ents) const

Get entities not in database.

Parameters
ents
Returns
MoFEMErrorCode

Definition at line 915 of file BitRefManager.cpp.

915 {
916 MoFEM::Interface &m_field = cOre;
917 auto ref_ents_ptr = m_field.get_ref_ents();
919 auto eit = ents.begin();
920 for (; eit != ents.end();) {
921 auto rit = ref_ents_ptr->get<Ent_mi_tag>().find(*eit);
922 if (rit != ref_ents_ptr->get<Ent_mi_tag>().end()) {
923 eit = ents.erase(eit);
924 } else {
925 eit++;
926 }
927 }
929}
virtual const RefEntity_multiIndex * get_ref_ents() const =0
Get the ref ents object.

◆ get_th_RefBitLevel()

Tag MoFEM::BitRefManager::get_th_RefBitLevel ( ) const

Definition at line 683 of file BitRefManager.hpp.

683{ return cOre.get_th_RefBitLevel(); }

◆ get_th_RefParentHandle()

Tag MoFEM::BitRefManager::get_th_RefParentHandle ( ) const

Definition at line 680 of file BitRefManager.hpp.

680 {
682 }
Tag get_th_RefParentHandle() const
Definition: Core.hpp:207

◆ getAllEntitiesNotInDatabase()

MoFEMErrorCode MoFEM::BitRefManager::getAllEntitiesNotInDatabase ( Range &  ents) const

Get all entities not in database.

Parameters
ents
Returns
MoFEMErrorCode

Definition at line 905 of file BitRefManager.cpp.

905 {
906 MoFEM::Interface &m_field = cOre;
907 moab::Interface &moab = m_field.get_moab();
909 CHKERR moab.get_entities_by_handle(0, ents, false);
910 ents = subtract(ents, ents.subset_by_type(MBENTITYSET));
913}
#define MoFEMFunctionBegin
First executable line of each MoFEM function, used for error handling. Final line of MoFEM functions ...
Definition: definitions.h:359
#define MoFEMFunctionReturn(a)
Last executable line of each PETSc function used for error handling. Replaces return()
Definition: definitions.h:429
#define CHKERR
Inline error check.
Definition: definitions.h:548
MoFEMErrorCode filterEntitiesNotInDatabase(Range &ents) const
Get entities not in database.

◆ getEntitiesByParentType()

MoFEMErrorCode MoFEM::BitRefManager::getEntitiesByParentType ( const BitRefLevel  bit,
const BitRefLevel  mask,
const EntityType  type,
Range &  ents,
const int  verb = QUIET 
) const

get entities by bit ref level and type of parent

Note
Entities have to be added to MoFEM database
Parameters
BitRefLevelbitLevel
BitRefLevelmask
typeof parent
entsreturned ents
Returns
error code

Definition at line 880 of file BitRefManager.cpp.

884 {
885 MoFEM::Interface &m_field = cOre;
886 auto ref_ents_ptr = m_field.get_ref_ents();
888 auto &ref_ents = ref_ents_ptr->get<Ent_Ent_mi_tag>();
889 auto it = ref_ents.lower_bound(get_id_for_min_type(type));
890 auto hi_it = ref_ents.upper_bound(get_id_for_max_type(type));
891 std::vector<EntityHandle> ents_vec;
892 ents_vec.reserve(std::distance(it, hi_it));
893 for (; it != hi_it; it++) {
894 const BitRefLevel &ent_bit = it->get()->getBitRefLevel();
895 if ((ent_bit & mask) == ent_bit && (ent_bit & bit).any())
896 ents_vec.emplace_back(it->get()->getEnt());
897 }
898 ents.insert_list(ents_vec.begin(), ents_vec.end());
899 if (verb > NOISY)
900 MOFEM_LOG("BitRefSelf", Sev::noisy)
901 << "getEntitiesByParentType: " << ents << endl;
903}
@ NOISY
Definition: definitions.h:224
std::bitset< BITREFLEVEL_SIZE > BitRefLevel
Bit structure attached to each entity identifying to what mesh entity is attached.
Definition: Types.hpp:51
EntityHandle get_id_for_max_type()
EntityHandle get_id_for_min_type()

◆ query_interface()

MoFEMErrorCode MoFEM::BitRefManager::query_interface ( boost::typeindex::type_index  type_index,
UnknownInterface **  iface 
) const
virtual

Implements MoFEM::UnknownInterface.

Definition at line 23 of file BitRefManager.cpp.

24 {
26 *iface = const_cast<BitRefManager *>(this);
28}
BitRefManager(const MoFEM::Core &core)

◆ writeBitLevel()

MoFEMErrorCode MoFEM::BitRefManager::writeBitLevel ( const BitRefLevel  bit,
const BitRefLevel  mask,
const char *  file_name,
const char *  file_type,
const char *  options,
const bool  check_for_empty = true 
) const

Write bit ref level to file.

Parameters
bitbit ref level
maskmask of bit ref level
dimdimension
file_namefile name (see moab documentation)
file_typefile type (see moab documentation)
optionsfile options (see moab documentation)
Returns
error code

Definition at line 641 of file BitRefManager.cpp.

646 {
647 MoFEM::Interface &m_field = cOre;
648 moab::Interface &moab(m_field.get_moab());
650 EntityHandle meshset;
651 CHKERR moab.create_meshset(MESHSET_SET, meshset);
652 CHKERR getEntitiesByRefLevel(bit, mask, meshset);
653 int nb_ents;
654 CHKERR moab.get_number_entities_by_handle(meshset, nb_ents, true);
655 if (check_for_empty && !nb_ents) {
656 MOFEM_LOG("SELF", Sev::warning)
657 << "No entities to save < " << file_name << " > in writeBitLevel";
659 }
660
661 CHKERR moab.write_file(file_name, file_type, options, &meshset, 1);
662 CHKERR moab.delete_entities(&meshset, 1);
664}
MoFEMErrorCode getEntitiesByRefLevel(const BitRefLevel bit, const BitRefLevel mask, const EntityHandle meshset, const int verb=QUIET) const
add all ents from ref level given by bit to meshset

◆ writeBitLevelByDim()

MoFEMErrorCode MoFEM::BitRefManager::writeBitLevelByDim ( const BitRefLevel  bit,
const BitRefLevel  mask,
const int  dim,
const char *  file_name,
const char *  file_type,
const char *  options,
const bool  check_for_empty = true 
) const

Write bit ref level to file.

Parameters
bitbit ref level
maskmask of bit ref level
dimdimension
file_namefile name (see moab documentation)
file_typefile type (see moab documentation)
optionsfile options (see moab documentation)
Returns
error code
Examples
hanging_node_approx.cpp.

Definition at line 667 of file BitRefManager.cpp.

670 {
671 MoFEM::Interface &m_field = cOre;
672 moab::Interface &moab(m_field.get_moab());
674 Range ents;
676 if (check_for_empty && ents.empty()) {
677 MOFEM_LOG("SELF", Sev::warning)
678 << "No entities to save < " << file_name << " > in writeBitLevelByDim";
680 }
681 EntityHandle meshset;
682 CHKERR moab.create_meshset(MESHSET_SET, meshset);
683 CHKERR moab.add_entities(meshset, ents);
684 CHKERR moab.write_file(file_name, file_type, options, &meshset, 1);
685 CHKERR moab.delete_entities(&meshset, 1);
687}
const int dim
MoFEMErrorCode getEntitiesByDimAndRefLevel(const BitRefLevel bit, const BitRefLevel mask, const int dim, const EntityHandle meshset, int verb=0) const
add all ents from ref level given by bit to meshset

◆ writeBitLevelByType()

MoFEMErrorCode MoFEM::BitRefManager::writeBitLevelByType ( const BitRefLevel  bit,
const BitRefLevel  mask,
const EntityType  type,
const char *  file_name,
const char *  file_type,
const char *  options,
const bool  check_for_empty = true 
) const

Write bit ref level to file.

Parameters
bitbit ref level
maskmask of bit ref level
typetype of entity
file_namefile name (see moab documentation)
file_typefile type (see moab documentation)
optionsfile options (see moab documentation)
Returns
error code

Definition at line 689 of file BitRefManager.cpp.

692 {
693 MoFEM::Interface &m_field = cOre;
694 moab::Interface &moab(m_field.get_moab());
696 Range ents;
698 if (check_for_empty && ents.empty()) {
699 MOFEM_LOG("SELF", Sev::warning)
700 << "No entities to save < " << file_name << " > in writeBitLevelByType";
702 }
703 EntityHandle meshset;
704 CHKERR moab.create_meshset(MESHSET_SET, meshset);
705 CHKERR moab.add_entities(meshset, ents);
706 CHKERR moab.write_file(file_name, file_type, options, &meshset, 1);
707 CHKERR moab.delete_entities(&meshset, 1);
709}
MoFEMErrorCode getEntitiesByTypeAndRefLevel(const BitRefLevel bit, const BitRefLevel mask, const EntityType type, const EntityHandle meshset, int verb=0) const
add all ents from ref level given by bit to meshset

◆ writeEntitiesAllBitLevelsByType()

MoFEMErrorCode MoFEM::BitRefManager::writeEntitiesAllBitLevelsByType ( const BitRefLevel  mask,
const EntityType  type,
const char *  file_name,
const char *  file_type,
const char *  options 
)

Write all entities by bit levels and type.

Parameters
mask
type
file_name
file_type
options
Returns
MoFEMErrorCode

Definition at line 729 of file BitRefManager.cpp.

731 {
733 for (int ll = 0; ll != BITREFLEVEL_SIZE; ++ll) {
734 std::string name = boost::lexical_cast<std::string>(ll) + "_" + file_name;
735 CHKERR writeBitLevelByType(BitRefLevel().set(ll), mask, type, name.c_str(),
736 file_type, options, true);
737 }
739}
#define BITREFLEVEL_SIZE
max number of refinements
Definition: definitions.h:232
MoFEMErrorCode writeBitLevelByType(const BitRefLevel bit, const BitRefLevel mask, const EntityType type, const char *file_name, const char *file_type, const char *options, const bool check_for_empty=true) const
Write bit ref level to file.

◆ writeEntitiesNotInDatabase()

MoFEMErrorCode MoFEM::BitRefManager::writeEntitiesNotInDatabase ( const char *  file_name,
const char *  file_type,
const char *  options,
const bool  check_for_empty = true 
) const

Write ents not in database.

Parameters
file_name
file_typefor example "VTK"
options
check_for_empty
Returns
MoFEMErrorCode

Definition at line 711 of file BitRefManager.cpp.

713 {
714 MoFEM::Interface &m_field = cOre;
715 moab::Interface &moab(m_field.get_moab());
717 EntityHandle meshset;
718 Range ents;
720 if (check_for_empty && ents.empty())
722 CHKERR moab.create_meshset(MESHSET_SET, meshset);
723 CHKERR moab.add_entities(meshset, ents);
724 CHKERR moab.write_file(file_name, file_type, options, &meshset, 1);
725 CHKERR moab.delete_entities(&meshset, 1);
727}
MoFEMErrorCode getAllEntitiesNotInDatabase(Range &ents) const
Get all entities not in database.

Member Data Documentation

◆ cOre

MoFEM::Core& MoFEM::BitRefManager::cOre

Definition at line 36 of file BitRefManager.hpp.

◆ dEbug

bool MoFEM::BitRefManager::dEbug

Definition at line 37 of file BitRefManager.hpp.


The documentation for this struct was generated from the following files: