v0.8.23
Public Member Functions | Public Attributes | List of all members
MoFEM::BitRefManager Struct Reference

Managing BitRefLevels. More...

#include <src/interfaces/BitRefManager.hpp>

Inheritance diagram for MoFEM::BitRefManager:
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Collaboration diagram for MoFEM::BitRefManager:
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Public Member Functions

MoFEMErrorCode query_interface (const MOFEMuuid &uuid, UnknownInterface **iface) const
 
 BitRefManager (const MoFEM::Core &core)
 
 ~BitRefManager ()
 Destructor. More...
 
- Public Member Functions inherited from MoFEM::UnknownInterface
template<class IFACE >
MoFEMErrorCode registerInterface (const MOFEMuuid &uuid, bool error_if_registration_failed=true)
 Register interface. More...
 
template<class IFACE , bool VERIFY = false>
MoFEMErrorCode getInterface (const MOFEMuuid &uuid, IFACE *&iface) const
 Get interface by uuid and return reference to pointer of interface. More...
 
template<class IFACE >
MoFEMErrorCode getInterface (IFACE *&iface) const
 Get interface refernce to pointer of interface. More...
 
template<class IFACE >
MoFEMErrorCode getInterface (IFACE **const iface) const
 Get interface pointer to pointer of interface. More...
 
template<class IFACE , typename boost::enable_if< boost::is_pointer< IFACE >, int >::type = 0>
IFACE getInterface () const
 Get interface pointer to pointer of interface. More...
 
template<class IFACE , typename boost::enable_if< boost::is_reference< IFACE >, int >::type = 0>
IFACE getInterface () const
 Get reference to interface. More...
 
template<class IFACE >
IFACE * getInterface () const
 Function returning pointer to interface. More...
 
virtual ~UnknownInterface ()
 
virtual MoFEMErrorCode getLibVersion (Version &version) const
 Get library version. More...
 
virtual const MoFEMErrorCode getFileVersion (moab::Interface &moab, Version &version) const
 Get database major version. More...
 
virtual MoFEMErrorCode getInterfaceVersion (Version &version) const
 Get database major version. More...
 
template<>
MoFEMErrorCode getInterface (const MOFEMuuid &uuid, UnknownInterface *&iface) const
 

Public Attributes

MoFEM::CorecOre
 
bool dEbug
 

Setting and shifting bits

MoFEMErrorCode setBitRefLevel (const Range &ents, const BitRefLevel bit, const bool only_tets=true, int verb=0) const
 add entities to database and set bit ref levelThis function set bit ref level, add entries to core database and create ref finite elements. Finite elements are create of entities in function argument, whereas all lower dimension entities are added as a field entities More...
 
MoFEMErrorCode setElementsBitRefLevel (const Range &ents, const BitRefLevel bit=BitRefLevel(), int verb=QUIET) const
 add entities to database and set bit ref level More...
 
MoFEMErrorCode setEntitiesBitRefLevel (const Range &ents, const BitRefLevel bit=BitRefLevel(), int verb=QUIET) const
 add entities to database and set bit ref level More...
 
MoFEMErrorCode setBitRefLevelByDim (const EntityHandle meshset, const int dim, const BitRefLevel bit, int verb=QUIET) const
 
MoFEMErrorCode setBitRefLevelByType (const EntityHandle meshset, const EntityType type, const BitRefLevel bit, int verb=QUIET) const
 
MoFEMErrorCode setBitLevelToMeshset (const EntityHandle meshset, const BitRefLevel bit, int verb=0) const
 
MoFEMErrorCode addToDatabaseBitRefLevelByType (const EntityType type, const BitRefLevel bit, const BitRefLevel mask=BitRefLevel().set(), int verb=QUIET) const
 Add entities which exist in MoAB database, and have set appropiate BitRef level tag, to multi-indices in MoFEM. More...
 
MoFEMErrorCode addToDatabaseBitRefLevelByDim (const int dim, const BitRefLevel bit, const BitRefLevel mask=BitRefLevel().set(), int verb=QUIET) const
 Add entities which exist in MoAB database, and have set appropiate BitRef level tag, to multi-indices in MoFEM. More...
 
MoFEMErrorCode addBitRefLevel (const Range &ents, const BitRefLevel bit, int verb=QUIET) const
 add bit ref level to ref entity More...
 
MoFEMErrorCode addBitRefLevelByDim (const EntityHandle meshset, const int dim, const BitRefLevel bit, int verb=QUIET) const
 add bit ref level by dimension More...
 
MoFEMErrorCode setNthBitRefLevel (const Range &ents, const int n, const bool b, int verb=0) const
 Set nth bit ref level. More...
 
MoFEMErrorCode setNthBitRefLevel (const int n, const bool b, int verb=0) const
 Set nth bit ref level. More...
 
MoFEMErrorCode shiftLeftBitRef (const int shift, const BitRefLevel mask=BitRefLevel().set(), int verb=-1) const
 left shift bit ref levelthis results of deletion of entities on far left side More...
 
MoFEMErrorCode shiftRightBitRef (const int shift, const BitRefLevel mask=BitRefLevel().set(), int verb=-1) const
 right shift bit ref level More...
 

Entity handlers by bit ref level

MoFEMErrorCode filterEntitiesByRefLevel (const BitRefLevel bit, const BitRefLevel mask, Range &ents, int verb=QUIET) const
 filter entities by bit ref level More...
 
MoFEMErrorCode getEntitiesByTypeAndRefLevel (const BitRefLevel bit, const BitRefLevel mask, const EntityType type, const EntityHandle meshset, int verb=0) const
 add all ents from ref level given by bit to meshset More...
 
MoFEMErrorCode getEntitiesByTypeAndRefLevel (const BitRefLevel bit, const BitRefLevel mask, const EntityType type, Range &ents, int verb=0) const
 add all ents from ref level given by bit to meshset More...
 
MoFEMErrorCode getEntitiesByDimAndRefLevel (const BitRefLevel bit, const BitRefLevel mask, const int dim, const EntityHandle meshset, int verb=0) const
 add all ents from ref level given by bit to meshset More...
 
MoFEMErrorCode getEntitiesByDimAndRefLevel (const BitRefLevel bit, const BitRefLevel mask, const int dim, Range &ents, int verb=0) const
 add all ents from ref level given by bit to meshset More...
 
MoFEMErrorCode getEntitiesByRefLevel (const BitRefLevel bit, const BitRefLevel mask, const EntityHandle meshset, const int verb=QUIET) const
 add all ents from ref level given by bit to meshset More...
 
MoFEMErrorCode getEntitiesByRefLevel (const BitRefLevel bit, const BitRefLevel mask, Range &ents, const int verb=QUIET) const
 add all ents from ref level given by bit to meshset More...
 
MoFEMErrorCode getEntitiesByParentType (const BitRefLevel bit, const BitRefLevel mask, const EntityType type, Range &ents, const int verb=QUIET) const
 get entities by bit ref level and type of parent More...
 
MoFEMErrorCode getAllEntitiesNotInDatabase (Range &ents) const
 Get all entities not in database. More...
 
MoFEMErrorCode filterEntitiesNotInDatabase (Range &ents) const
 Get entities not in database. More...
 

Get adjacencies bit ref level

virtual MoFEMErrorCode getAdjacenciesEquality (const EntityHandle from_entity, const int to_dimension, Range &adj_entities) const
 Get the adjacencies associated with a entity to entities of a specified dimension.bit ref level of adjacent entities is equal to bit ref level of adjacent entities. More...
 
virtual MoFEMErrorCode getAdjacenciesAny (const EntityHandle from_entity, const int to_dimension, Range &adj_entities) const
 Get the adjacencies associated with a entity to entities of a specified dimension.bit ref level of adjacent entities is any of bit ref level of adjacent entities. More...
 
virtual MoFEMErrorCode getAdjacencies (const Problem *problem_ptr, const EntityHandle *from_entities, const int num_entities, const int to_dimension, Range &adj_entities, const int operation_type=moab::Interface::INTERSECT, const int verb=0) const
 Get the adjacencies associated with a entity to entities of a specified dimension.bit ref level of adjacent entities is equal to bit ref level of adjacent entities. More...
 
virtual MoFEMErrorCode getAdjacencies (const BitRefLevel bit, const EntityHandle *from_entities, const int num_entities, const int to_dimension, Range &adj_entities, const int operation_type=moab::Interface::INTERSECT, const int verb=0) const
 Get the adjacencies associated with a entity to entities of a specified dimension.bit ref level of adjacent entities is equal to bit ref level of adjacent entities. More...
 

Update meshsets and ranges by children

MoFEMErrorCode updateMeshsetByEntitiesChildren (const EntityHandle parent, const BitRefLevel &parent_bit, const BitRefLevel &parent_mask, const BitRefLevel &child_bit, const BitRefLevel &child_mask, const EntityHandle child, EntityType child_type, const bool recursive=false, int verb=0)
 Get child entities form meshset containing parent entitiesSearch for refined entities of given type whose parent are entities in the parent meshset. It can be used for example to transfer information about boundary conditions to refined mesh or split mesh by interface elements. It is used by function refine_MESHSET, to update MESHSET finite elements. More...
 
MoFEMErrorCode updateMeshsetByEntitiesChildren (const EntityHandle parent, const BitRefLevel &child_bit, const EntityHandle child, EntityType child_type, const bool recursive=false, int verb=0)
 Get child entities form meshset containing parent entities. More...
 
MoFEMErrorCode updateFieldMeshsetByEntitiesChildren (const BitRefLevel &child_bit, int verb=0)
 update fields meshesets by child entities More...
 
MoFEMErrorCode updateFieldMeshsetByEntitiesChildren (const std::string name, const BitRefLevel &child_bit, int verb=0)
 update field meshset by child entities More...
 
MoFEMErrorCode updateFiniteElementMeshsetByEntitiesChildren (const std::string name, const BitRefLevel &child_bit, const EntityType fe_ent_type, int verb=0)
 update finite element meshset by child entities More...
 
MoFEMErrorCode updateRange (const Range &parent, Range &child)
 Update range by prents. More...
 

Writting files

MoFEMErrorCode writeBitLevelByType (const BitRefLevel bit, const BitRefLevel mask, const EntityType type, const char *file_name, const char *file_type, const char *options, const bool check_for_empty=true) const
 Write bit ref level to file. More...
 
MoFEMErrorCode writeEntitiesNotInDatabase (const char *file_name, const char *file_type, const char *options, const bool check_for_empty=true) const
 Write ents not in database. More...
 
MoFEMErrorCode writeEntitiesAllBitLevelsByType (const BitRefLevel mask, const EntityType type, const char *file_name, const char *file_type, const char *options)
 Write all entities by bit levels and type. More...
 

Additional Inherited Members

- Protected Member Functions inherited from MoFEM::UnknownInterface
boost::typeindex::type_index getClassIdx (const MOFEMuuid &uid) const
 Get type name for interface Id. More...
 
MOFEMuuid getUId (const boost::typeindex::type_index &class_idx) const
 Get interface Id for class name. More...
 

Detailed Description

Managing BitRefLevels.

Examples
build_problems.cpp, dm_build_partitioned_mesh.cpp, dm_create_subdm.cpp, elasticity.cpp, elasticity_mixed_formulation.cpp, ep.cpp, field_axpy_atom_test.cpp, field_to_vertices.cpp, forces_and_sources_testing_edge_element.cpp, forces_and_sources_testing_flat_prism_element.cpp, forces_and_sources_testing_users_base.cpp, mesh_cut.cpp, mesh_insert_interface_atom.cpp, mesh_smoothing.cpp, minimal_surface_area.cpp, prisms_elements_from_surface.cpp, Remodeling.cpp, remove_entities_from_problem.cpp, split_sideset.cpp, and unsaturated_transport.cpp.

Definition at line 34 of file BitRefManager.hpp.

Constructor & Destructor Documentation

◆ BitRefManager()

MoFEM::BitRefManager::BitRefManager ( const MoFEM::Core core)

Definition at line 34 of file BitRefManager.cpp.

35  : cOre(const_cast<MoFEM::Core &>(core)), dEbug(false) {}

◆ ~BitRefManager()

MoFEM::BitRefManager::~BitRefManager ( )

Destructor.

Definition at line 36 of file BitRefManager.cpp.

36 {}

Member Function Documentation

◆ filterEntitiesByRefLevel()

MoFEMErrorCode MoFEM::BitRefManager::filterEntitiesByRefLevel ( const BitRefLevel  bit,
const BitRefLevel  mask,
Range &  ents,
int  verb = QUIET 
) const

filter entities by bit ref level

Parameters
bit
mask
ents
QUIET
Returns
MoFEMErrorCode

Definition at line 596 of file BitRefManager.cpp.

599  {
600  MoFEM::Interface &m_field = cOre;
601  moab::Interface &moab(m_field.get_moab());
603 
604  std::vector<EntityHandle> ents_vec;
605  ents_vec.reserve(ents.size());
606 
607  std::vector<BitRefLevel *> tags_bits_ptr_vec(ents.size());
608 
609  Range swap_ents;
610  auto hint = swap_ents.begin();
611 
612  for (Range::pair_iterator p_eit = ents.pair_begin(); p_eit != ents.pair_end();
613  ++p_eit) {
614 
615  EntityHandle f = p_eit->first;
616  const EntityHandle s = p_eit->second;
617 
618  // get bits on entities
619  rval = moab.tag_get_by_ptr(cOre.get_th_RefBitLevel(), Range(f, s),
620  (const void **)(&*tags_bits_ptr_vec.begin()));
621 
622  if (rval == MB_SUCCESS) {
623 
624  auto bit_it = tags_bits_ptr_vec.begin();
625 
626  auto check = [&bit, &mask](const auto &entity_bit) -> bool {
627  return
628 
629  (entity_bit & bit).any() &&
630 
631  ((entity_bit & mask) == entity_bit);
632  };
633 
634  while (f != s + 1) {
635 
636  while (f != s + 1 && !check(**bit_it)) {
637  ++bit_it;
638  ++f;
639  }
640 
641  if (f != s + 1) {
642 
643  const EntityHandle start = f;
644 
645  while (f != (s + 1) && check(**bit_it)) {
646  ++bit_it;
647  ++f;
648  };
649 
650  hint = swap_ents.insert(hint, start, f - 1);
651  }
652 
653  }
654  }
655  }
656 
657  ents.swap(swap_ents);
658 
660 }
Tag get_th_RefBitLevel() const
Definition: Core.hpp:151
virtual moab::Interface & get_moab()=0
#define MoFEMFunctionBeginHot
First executable line of each MoFEM function, used for error handling. Final line of MoFEM functions ...
Definition: definitions.h:500
#define MoFEMFunctionReturnHot(a)
Last executable line of each PETSc function used for error handling. Replaces return()
Definition: definitions.h:507
static MoFEMErrorCodeGeneric< moab::ErrorCode > rval
Definition: Exceptions.hpp:84

◆ filterEntitiesNotInDatabase()

MoFEMErrorCode MoFEM::BitRefManager::filterEntitiesNotInDatabase ( Range &  ents) const

Get entities not in database.

Parameters
ents
Returns
MoFEMErrorCode

Definition at line 761 of file BitRefManager.cpp.

761  {
762  MoFEM::Interface &m_field = cOre;
763  const RefEntity_multiIndex *ref_ents_ptr;
765  ierr = m_field.get_ref_ents(&ref_ents_ptr);
766  CHKERRG(ierr);
767  Range::iterator eit = ents.begin();
768  for (; eit != ents.end();) {
769  RefEntity_multiIndex::index<Ent_mi_tag>::type::iterator rit;
770  rit = ref_ents_ptr->get<Ent_mi_tag>().find(*eit);
771  if (rit != ref_ents_ptr->get<Ent_mi_tag>().end()) {
772  eit = ents.erase(eit);
773  } else {
774  eit++;
775  }
776  }
778 }
virtual MoFEMErrorCode get_ref_ents(const RefEntity_multiIndex **refined_ents_ptr) const =0
Get ref entities multi-index from database.
#define MoFEMFunctionBeginHot
First executable line of each MoFEM function, used for error handling. Final line of MoFEM functions ...
Definition: definitions.h:500
#define CHKERRG(n)
Check error code of MoFEM/MOAB/PETSc function.
Definition: definitions.h:543
#define MoFEMFunctionReturnHot(a)
Last executable line of each PETSc function used for error handling. Replaces return()
Definition: definitions.h:507
multi_index_container< boost::shared_ptr< RefEntity >, indexed_by< ordered_unique< tag< Ent_mi_tag >, member< RefEntity::BasicEntity, EntityHandle, &RefEntity::ent > >, ordered_non_unique< tag< Ent_Ent_mi_tag >, const_mem_fun< RefEntity, EntityHandle, &RefEntity::getParentEnt > >, ordered_non_unique< tag< EntType_mi_tag >, const_mem_fun< RefEntity::BasicEntity, EntityType, &RefEntity::getEntType > >, ordered_non_unique< tag< ParentEntType_mi_tag >, const_mem_fun< RefEntity, EntityType, &RefEntity::getParentEntType > >, ordered_non_unique< tag< Composite_EntType_and_ParentEntType_mi_tag >, composite_key< RefEntity, const_mem_fun< RefEntity::BasicEntity, EntityType, &RefEntity::getEntType >, const_mem_fun< RefEntity, EntityType, &RefEntity::getParentEntType > > >, ordered_non_unique< tag< Composite_ParentEnt_And_EntType_mi_tag >, composite_key< RefEntity, const_mem_fun< RefEntity::BasicEntity, EntityType, &RefEntity::getEntType >, const_mem_fun< RefEntity, EntityHandle, &RefEntity::getParentEnt > > > > > RefEntity_multiIndex

◆ getAllEntitiesNotInDatabase()

MoFEMErrorCode MoFEM::BitRefManager::getAllEntitiesNotInDatabase ( Range &  ents) const

Get all entities not in database.

Parameters
ents
Returns
MoFEMErrorCode

Definition at line 749 of file BitRefManager.cpp.

749  {
750  MoFEM::Interface &m_field = cOre;
751  moab::Interface &moab = m_field.get_moab();
753  rval = moab.get_entities_by_handle(0, ents, false);
754  CHKERRG(rval);
755  ents = subtract(ents, ents.subset_by_type(MBENTITYSET));
757  CHKERRG(ierr);
759 }
virtual moab::Interface & get_moab()=0
#define MoFEMFunctionBeginHot
First executable line of each MoFEM function, used for error handling. Final line of MoFEM functions ...
Definition: definitions.h:500
#define CHKERRG(n)
Check error code of MoFEM/MOAB/PETSc function.
Definition: definitions.h:543
#define MoFEMFunctionReturnHot(a)
Last executable line of each PETSc function used for error handling. Replaces return()
Definition: definitions.h:507
static MoFEMErrorCodeGeneric< moab::ErrorCode > rval
Definition: Exceptions.hpp:84
MoFEMErrorCode filterEntitiesNotInDatabase(Range &ents) const
Get entities not in database.

◆ getEntitiesByParentType()

MoFEMErrorCode MoFEM::BitRefManager::getEntitiesByParentType ( const BitRefLevel  bit,
const BitRefLevel  mask,
const EntityType  type,
Range &  ents,
const int  verb = QUIET 
) const

get entities by bit ref level and type of parent

Note
Entities have to be added to MoFEM database
Parameters
BitRefLevelbitLevel
BitRefLevelmask
typeof parent
entsreturned ents
Returns
error code

Definition at line 724 of file BitRefManager.cpp.

728  {
729  MoFEM::Interface &m_field = cOre;
730  const RefEntity_multiIndex *ref_ents_ptr;
732  CHKERR m_field.get_ref_ents(&ref_ents_ptr);
733  auto &ref_ents = ref_ents_ptr->get<ParentEntType_mi_tag>();
734  auto it = ref_ents.lower_bound(type);
735  auto hi_it = ref_ents.upper_bound(type);
736  std::vector<EntityHandle> ents_vec;
737  ents_vec.reserve(std::distance(it, hi_it));
738  for (; it != hi_it; it++) {
739  const BitRefLevel &ent_bit = it->get()->getBitRefLevel();
740  if ((ent_bit & mask) == ent_bit && (ent_bit & bit).any())
741  ents_vec.emplace_back(it->get()->getRefEnt());
742  }
743  ents.insert_list(ents_vec.begin(), ents_vec.end());
744  if (verb > NOISY)
745  cerr << "getEntitiesByParentType: " << ents << endl;
747 }
virtual MoFEMErrorCode get_ref_ents(const RefEntity_multiIndex **refined_ents_ptr) const =0
Get ref entities multi-index from database.
#define MoFEMFunctionReturn(a)
Last executable line of each PETSc function used for error handling. Replaces return()
Definition: definitions.h:476
#define CHKERR
Inline error check.
Definition: definitions.h:595
std::bitset< BITREFLEVEL_SIZE > BitRefLevel
Bit structure attached to each entity identifying to what mesh entity is attached.
Definition: Types.hpp:51
multi_index_container< boost::shared_ptr< RefEntity >, indexed_by< ordered_unique< tag< Ent_mi_tag >, member< RefEntity::BasicEntity, EntityHandle, &RefEntity::ent > >, ordered_non_unique< tag< Ent_Ent_mi_tag >, const_mem_fun< RefEntity, EntityHandle, &RefEntity::getParentEnt > >, ordered_non_unique< tag< EntType_mi_tag >, const_mem_fun< RefEntity::BasicEntity, EntityType, &RefEntity::getEntType > >, ordered_non_unique< tag< ParentEntType_mi_tag >, const_mem_fun< RefEntity, EntityType, &RefEntity::getParentEntType > >, ordered_non_unique< tag< Composite_EntType_and_ParentEntType_mi_tag >, composite_key< RefEntity, const_mem_fun< RefEntity::BasicEntity, EntityType, &RefEntity::getEntType >, const_mem_fun< RefEntity, EntityType, &RefEntity::getParentEntType > > >, ordered_non_unique< tag< Composite_ParentEnt_And_EntType_mi_tag >, composite_key< RefEntity, const_mem_fun< RefEntity::BasicEntity, EntityType, &RefEntity::getEntType >, const_mem_fun< RefEntity, EntityHandle, &RefEntity::getParentEnt > > > > > RefEntity_multiIndex
#define MoFEMFunctionBegin
First executable line of each MoFEM function, used for error handling. Final line of MoFEM functions ...
Definition: definitions.h:406

◆ query_interface()

MoFEMErrorCode MoFEM::BitRefManager::query_interface ( const MOFEMuuid uuid,
UnknownInterface **  iface 
) const
virtual

Implements MoFEM::UnknownInterface.

Definition at line 22 of file BitRefManager.cpp.

23  {
25  *iface = NULL;
26  if (uuid == IDD_MOFEMBitRefManager) {
27  *iface = const_cast<BitRefManager *>(this);
29  }
30  SETERRQ(PETSC_COMM_SELF, MOFEM_DATA_INCONSISTENCY, "unknown interface");
32 }
#define MoFEMFunctionBeginHot
First executable line of each MoFEM function, used for error handling. Final line of MoFEM functions ...
Definition: definitions.h:500
static const MOFEMuuid IDD_MOFEMBitRefManager
#define MoFEMFunctionReturnHot(a)
Last executable line of each PETSc function used for error handling. Replaces return()
Definition: definitions.h:507

◆ writeBitLevelByType()

MoFEMErrorCode MoFEM::BitRefManager::writeBitLevelByType ( const BitRefLevel  bit,
const BitRefLevel  mask,
const EntityType  type,
const char *  file_name,
const char *  file_type,
const char *  options,
const bool  check_for_empty = true 
) const

Write bit ref level to file.

Parameters
bitbit ref level
maskmask of bit ref level
typetype of entity
file_namefile name (see moab documentation)
file_typefile type (see moab documentation)
optionsfile options (see moab documentation)
Returns
error code

Definition at line 535 of file BitRefManager.cpp.

538  {
539  MoFEM::Interface &m_field = cOre;
540  moab::Interface &moab(m_field.get_moab());
542  Range ents;
543  CHKERR getEntitiesByTypeAndRefLevel(bit, mask, type, ents);
544  if (check_for_empty && ents.empty())
546  EntityHandle meshset;
547  CHKERR moab.create_meshset(MESHSET_SET, meshset);
548  CHKERR moab.add_entities(meshset, ents);
549  CHKERR moab.write_file(file_name, file_type, options, &meshset, 1);
550  CHKERR moab.delete_entities(&meshset, 1);
552 }
virtual moab::Interface & get_moab()=0
MoFEMErrorCode getEntitiesByTypeAndRefLevel(const BitRefLevel bit, const BitRefLevel mask, const EntityType type, const EntityHandle meshset, int verb=0) const
add all ents from ref level given by bit to meshset
#define MoFEMFunctionReturn(a)
Last executable line of each PETSc function used for error handling. Replaces return()
Definition: definitions.h:476
#define MoFEMFunctionReturnHot(a)
Last executable line of each PETSc function used for error handling. Replaces return()
Definition: definitions.h:507
#define CHKERR
Inline error check.
Definition: definitions.h:595
#define MoFEMFunctionBegin
First executable line of each MoFEM function, used for error handling. Final line of MoFEM functions ...
Definition: definitions.h:406

◆ writeEntitiesAllBitLevelsByType()

MoFEMErrorCode MoFEM::BitRefManager::writeEntitiesAllBitLevelsByType ( const BitRefLevel  mask,
const EntityType  type,
const char *  file_name,
const char *  file_type,
const char *  options 
)

Write all entities by bit levels and type.

Parameters
mask
type
file_name
file_type
options
Returns
MoFEMErrorCode

Definition at line 572 of file BitRefManager.cpp.

574  {
576  for (int ll = 0; ll != BITREFLEVEL_SIZE; ++ll) {
577  std::string name = boost::lexical_cast<std::string>(ll) + "_" + file_name;
578  CHKERR writeBitLevelByType(BitRefLevel().set(ll), mask, type, name.c_str(),
579  file_type, options, true);
580  }
582 }
#define MoFEMFunctionReturn(a)
Last executable line of each PETSc function used for error handling. Replaces return()
Definition: definitions.h:476
#define BITREFLEVEL_SIZE
max number of refinements
Definition: definitions.h:278
#define CHKERR
Inline error check.
Definition: definitions.h:595
MoFEMErrorCode writeBitLevelByType(const BitRefLevel bit, const BitRefLevel mask, const EntityType type, const char *file_name, const char *file_type, const char *options, const bool check_for_empty=true) const
Write bit ref level to file.
std::bitset< BITREFLEVEL_SIZE > BitRefLevel
Bit structure attached to each entity identifying to what mesh entity is attached.
Definition: Types.hpp:51
#define MoFEMFunctionBegin
First executable line of each MoFEM function, used for error handling. Final line of MoFEM functions ...
Definition: definitions.h:406

◆ writeEntitiesNotInDatabase()

MoFEMErrorCode MoFEM::BitRefManager::writeEntitiesNotInDatabase ( const char *  file_name,
const char *  file_type,
const char *  options,
const bool  check_for_empty = true 
) const

Write ents not in database.

Parameters
file_name
file_typefor example "VTK"
options
check_for_empty
Returns
MoFEMErrorCode

Definition at line 554 of file BitRefManager.cpp.

556  {
557  MoFEM::Interface &m_field = cOre;
558  moab::Interface &moab(m_field.get_moab());
560  EntityHandle meshset;
561  Range ents;
563  if (check_for_empty && ents.empty())
565  CHKERR moab.create_meshset(MESHSET_SET, meshset);
566  CHKERR moab.add_entities(meshset, ents);
567  CHKERR moab.write_file(file_name, file_type, options, &meshset, 1);
568  CHKERR moab.delete_entities(&meshset, 1);
570 }
virtual moab::Interface & get_moab()=0
#define MoFEMFunctionReturn(a)
Last executable line of each PETSc function used for error handling. Replaces return()
Definition: definitions.h:476
#define MoFEMFunctionReturnHot(a)
Last executable line of each PETSc function used for error handling. Replaces return()
Definition: definitions.h:507
#define CHKERR
Inline error check.
Definition: definitions.h:595
#define MoFEMFunctionBegin
First executable line of each MoFEM function, used for error handling. Final line of MoFEM functions ...
Definition: definitions.h:406
MoFEMErrorCode getAllEntitiesNotInDatabase(Range &ents) const
Get all entities not in database.

Member Data Documentation

◆ cOre

MoFEM::Core& MoFEM::BitRefManager::cOre

Definition at line 39 of file BitRefManager.hpp.

◆ dEbug

bool MoFEM::BitRefManager::dEbug

Definition at line 40 of file BitRefManager.hpp.


The documentation for this struct was generated from the following files: