MoFEM::Problem Struct Reference

keeps basic data about problemThis is low level structure with information about problem, what elements compose problem and what DOFs are on rows and columns. More...

#include <src/multi_indices/ProblemsMultiIndices.hpp>

Collaboration diagram for MoFEM::Problem:

Classes
struct	SubProblemData
	Subproblem problem data. More...

Public Types
typedef multi_index_container< boost::weak_ptr< std::vector< NumeredDofEntity > >, indexed_by< sequenced<> > >	SequenceDofContainer

Public Member Functions
const boost::shared_ptr< NumeredDofEntity_multiIndex > &	getNumeredDofsRows () const
	get access to numeredDofsRows storing DOFs on rows More...
const boost::shared_ptr< NumeredDofEntity_multiIndex > &	getNumeredDofsCols () const
	get access to numeredDofsCols storing DOFs on cols More...
const boost::shared_ptr< NumeredEntFiniteElement_multiIndex > &	getNumeredFiniteElements () const
	get access to reference for multi-index storing finite elements More...
boost::shared_ptr< SubProblemData > &	getSubData () const
	Get main problem of sub-problem is. More...
boost::shared_ptr< ComposedProblemsData > &	getComposedProblemsData () const
	Het composed problems data structure. More...
MoFEMErrorCode	getDofByNameEntAndEntDofIdx (const string name, const EntityHandle ent, const int ent_dof_idx, const RowColData row_or_col, boost::shared_ptr< NumeredDofEntity > &dof_ptr) const
	get DOFs from problem More...
NumeredEntFiniteElementbyName::iterator	getNumeredFEsBegin (std::string fe_name) const
NumeredEntFiniteElementbyName::iterator	getNumeredFEsEnd (std::string fe_name) const
NumeredDofEntity_multiIndex::iterator	getNumeredDofsRowsBegin () const
NumeredDofEntity_multiIndex::iterator	getNumeredDofsRowsEnd () const
NumeredDofEntity_multiIndex::iterator	getNumeredDofsColsBegin () const
NumeredDofEntity_multiIndex::iterator	getNumeredDofsColsEnd () const
NumeredDofEntityByLocalIdx::iterator	getNumeredDofsRowsByLocIdxBegin (const DofIdx locidx) const
NumeredDofEntityByLocalIdx::iterator	getNumeredDofsRowsByLocIdxEnd (const DofIdx locidx) const
NumeredDofEntityByLocalIdx::iterator	getNumeredDofsColsByLocIdxBegin (const DofIdx locidx) const
NumeredDofEntityByLocalIdx::iterator	getNumeredDofsColsByLocIdxEnd (const DofIdx locidx) const
NumeredDofEntityByEnt::iterator	getNumeredDofsRowsByEntBegin (const EntityHandle ent) const
NumeredDofEntityByEnt::iterator	getNumeredDofsRowsByEntEnd (const EntityHandle ent) const
NumeredDofEntityByEnt::iterator	getNumeredDofsColsByEntBegin (const EntityHandle ent) const
NumeredDofEntityByEnt::iterator	getNumeredDofsColsByEntEnd (const EntityHandle ent) const
NumeredDofEntityByFieldName::iterator	getNumeredDofsRowsBegin (const std::string &name) const
NumeredDofEntityByFieldName::iterator	getNumeredDofsRowsEnd (const std::string &name) const
NumeredDofEntityByFieldName::iterator	getNumeredDofsColsBegin (const std::string &name) const
NumeredDofEntityByFieldName::iterator	getNumeredDofsColsEnd (const std::string &name) const
NumeredDofEntityByNameEntAndPart::iterator	getNumeredDofsRowsBegin (const std::string &name, const EntityHandle ent, const int part) const
NumeredDofEntityByNameEntAndPart::iterator	getNumeredDofsRowsEnd (const std::string &name, const EntityHandle ent, const int part) const
NumeredDofEntityByNameEntAndPart::iterator	getNumeredDofsColsBegin (const std::string &name, const EntityHandle ent, const int part) const
NumeredDofEntityByNameEntAndPart::iterator	getNumeredDofsColsEnd (const std::string &name, const EntityHandle ent, const int part) const
NumeredDofEntity_multiIndex::iterator	getNumeredDofsRowsBegin (const int part) const
NumeredDofEntity_multiIndex::iterator	getNumeredDofsRowsEnd (const int part) const
NumeredDofEntity_multiIndex::iterator	getNumeredDofsColsBegin (const int part) const
NumeredDofEntity_multiIndex::iterator	getNumeredDofsColsEnd (const int part) const
	Problem (Interface &moab, const EntityHandle meshset)
virtual	~Problem ()
BitProblemId	getId () const
std::string	getName () const
DofIdx	getNbDofsRow () const
DofIdx	getNbDofsCol () const
DofIdx	getNbLocalDofsRow () const
DofIdx	getNbLocalDofsCol () const
DofIdx	getNbGhostDofsRow () const
DofIdx	getNbGhostDofsCol () const
BitRefLevel	getBitRefLevel () const
BitRefLevel	getMaskBitRefLevel () const
MoFEMErrorCode	getRowDofsByPetscGlobalDofIdx (DofIdx idx, const NumeredDofEntity **dof_ptr, MoFEMTypes bh=MF_EXIST) const
	Get the Row Dofs By Petsc Global Dof Idx object. More...
MoFEMErrorCode	getColDofsByPetscGlobalDofIdx (DofIdx idx, const NumeredDofEntity **dof_ptr, MoFEMTypes bh=MF_EXIST) const
	Get the Col Dofs By Petsc Global Dof Idx object. More...
boost::weak_ptr< NumeredDofEntity >	getRowDofsByPetscGlobalDofIdx (DofIdx idx) const
	Get the Row Dofs By Petsc Global Dof Idx object. More...
boost::weak_ptr< NumeredDofEntity >	getColDofsByPetscGlobalDofIdx (DofIdx idx) const
	Get the Col Dofs By Petsc Global Dof Idx object. More...
BitFEId	getBitFEId () const
MoFEMErrorCode	getNumberOfElementsByNameAndPart (MPI_Comm comm, const std::string name, PetscLayout *layout) const
	Get number of finite elements by name on processors. More...
MoFEMErrorCode	getNumberOfElementsByPart (MPI_Comm comm, PetscLayout *layout) const
	Get number of finite elements on processors. More...
boost::shared_ptr< SequenceDofContainer > &	getRowDofsSequence () const
	Get reference to sequence data numbered dof container. More...
boost::shared_ptr< SequenceDofContainer > &	getColDofsSequence () const
	Get reference to sequence data numbered dof container. More...

Public Attributes
EntityHandle	meshset
BitProblemId *	tagId
	Unique problem ID. More...
const char *	tagName
	Problem name. More...
int	tagNameSize
	Size of problem name. More...
BitFEId *	tagBitFEId
	IDs of finite elements in problem. More...
BitRefLevel *	tagBitRefLevel
	BitRef level of finite elements in problem. More...
BitRefLevel *	tagMaskBitRefLevel
	BItRefMask of elements in problem. More...
DofIdx	nbDofsRow
	Global number of DOFs in row. More...
DofIdx	nbDofsCol
	Global number of DOFs in col. More...
DofIdx	nbLocDofsRow
	Local number of DOFs in row. More...
DofIdx	nbLocDofsCol
	Local number of DOFs in colIs. More...
DofIdx	nbGhostDofsRow
	Number of ghost DOFs in row. More...
DofIdx	nbGhostDofsCol
	Number of ghost DOFs in col. More...
boost::shared_ptr< NumeredDofEntity_multiIndex >	numeredDofsRows
	store DOFs on rows for this problem More...
boost::shared_ptr< NumeredDofEntity_multiIndex >	numeredDofsCols
	store DOFs on columns for this problem More...
boost::shared_ptr< NumeredEntFiniteElement_multiIndex >	numeredFiniteElements
	store finite elements More...
boost::shared_ptr< SubProblemData >	subProblemData
boost::shared_ptr< ComposedProblemsData >	composedProblemsData

Private Attributes
boost::shared_ptr< SequenceDofContainer >	sequenceRowDofContainer
boost::shared_ptr< SequenceDofContainer >	sequenceColDofContainer

Friends
std::ostream &	operator<< (std::ostream &os, const Problem &e)

Detailed Description

keeps basic data about problem

This is low level structure with information about problem, what elements compose problem and what DOFs are on rows and columns.

Todo:

fix names following name convention

Examples

cell_forces.cpp, EshelbianPlasticity.cpp, field_evaluator.cpp, loop_entities.cpp, lorentz_force.cpp, MagneticElement.hpp, and Remodeling.cpp.

Definition at line 79 of file ProblemsMultiIndices.hpp.

Member Typedef Documentation

SequenceDofContainer

typedef multi_index_container<boost::weak_ptr<std::vector<NumeredDofEntity> >, indexed_by<sequenced<> > > MoFEM::Problem::SequenceDofContainer

Definition at line 786 of file ProblemsMultiIndices.hpp.

Constructor & Destructor Documentation

Problem()

MoFEM::Problem::Problem	(	Interface &	moab,
		const EntityHandle	meshset
	)

Definition at line 22 of file ProblemsMultiIndices.cpp.

    : meshset(meshset), numeredDofsRows(new NumeredDofEntity_multiIndex()),
      numeredDofsCols(new NumeredDofEntity_multiIndex()),
      numeredFiniteElements(new NumeredEntFiniteElement_multiIndex()),
      sequenceRowDofContainer(new SequenceDofContainer()),
      sequenceColDofContainer(new SequenceDofContainer()) {
  ErrorCode rval;
  Tag th_ProblemId;
  rval = moab.tag_get_handle("_ProblemId", th_ProblemId);
  MOAB_THROW(rval);
  rval = moab.tag_get_by_ptr(th_ProblemId, &meshset, 1, (const void **)&tagId);
  MOAB_THROW(rval);
  Tag th_ProblemName;
  rval = moab.tag_get_handle("_ProblemName", th_ProblemName);
  MOAB_THROW(rval);
  rval = moab.tag_get_by_ptr(th_ProblemName, &meshset, 1,
                             (const void **)&tagName, &tagNameSize);
  MOAB_THROW(rval);
  Tag th_ProblemFEId;
  rval = moab.tag_get_handle("_ProblemFEId", th_ProblemFEId);
  MOAB_THROW(rval);
  rval = moab.tag_get_by_ptr(th_ProblemFEId, &meshset, 1,
                             (const void **)&tagBitFEId);
  MOAB_THROW(rval);
  Tag th_RefBitLevel;
  rval = moab.tag_get_handle("_RefBitLevel", th_RefBitLevel);
  MOAB_THROW(rval);
  rval = moab.tag_get_by_ptr(th_RefBitLevel, &meshset, 1,
                             (const void **)&tagBitRefLevel);
  MOAB_THROW(rval);
  Tag th_RefBitLevel_Mask;
  rval = moab.tag_get_handle("_RefBitLevelMask", th_RefBitLevel_Mask);
  MOAB_THROW(rval);
  rval = moab.tag_get_by_ptr(th_RefBitLevel_Mask, &meshset, 1,
                             (const void **)&tagMaskBitRefLevel);
  MOAB_THROW(rval);
}

~Problem()

MoFEM::Problem::~Problem ( )

virtual

Definition at line 60 of file ProblemsMultiIndices.cpp.

{}

Member Function Documentation

getBitFEId()

BitFEId MoFEM::Problem::getBitFEId

(

)

const

Definition at line 68 of file ProblemsMultiIndices.cpp.

{ return *tagBitFEId; }

getBitRefLevel()

BitRefLevel MoFEM::Problem::getBitRefLevel

(

)

const

Definition at line 683 of file ProblemsMultiIndices.hpp.

{ return *tagBitRefLevel; }

getColDofsByPetscGlobalDofIdx() [1/2]

MoFEMErrorCode MoFEM::Problem::getColDofsByPetscGlobalDofIdx	(	DofIdx	idx,
		const NumeredDofEntity **	dof_ptr,
		MoFEMTypes	bh = MF_EXIST
	)		const

Get the Col Dofs By Petsc Global Dof Idx object.

Parameters

idx
dof_ptr
bh

Returns

MoFEMErrorCode

Definition at line 106 of file ProblemsMultiIndices.cpp.

                                                                       {
  MoFEMFunctionBeginHot;
  auto weak_dof_ptr = getColDofsByPetscGlobalDofIdx(idx);
  if (auto shared_dof_ptr = weak_dof_ptr.lock()) {
    *dof_ptr = shared_dof_ptr.get();
  } else {
    if (bh == MF_EXIST)
      SETERRQ1(PETSC_COMM_SELF, MOFEM_NOT_FOUND, "row dof <%d> not found", idx);
    *dof_ptr = nullptr;
  }
  MoFEMFunctionReturnHot(0);
}

getColDofsByPetscGlobalDofIdx() [2/2]

boost::weak_ptr< NumeredDofEntity > MoFEM::Problem::getColDofsByPetscGlobalDofIdx

(

DofIdx

idx

)

const

Get the Col Dofs By Petsc Global Dof Idx object.

Parameters

idx

Returns

boost::weak_ptr<NumeredDofEntity>

Definition at line 82 of file ProblemsMultiIndices.cpp.

                                                       {
  MoFEMFunctionBeginHot;
  boost::weak_ptr<NumeredDofEntity> dof_weak_ptr;
  NumeredDofEntity_multiIndex::index<PetscGlobalIdx_mi_tag>::type::iterator dit;
  dit = numeredDofsCols->get<PetscGlobalIdx_mi_tag>().find(idx);
  if (dit != numeredDofsCols->get<PetscGlobalIdx_mi_tag>().end())
    dof_weak_ptr = *dit;
  return dof_weak_ptr;
}

getColDofsSequence()

boost::shared_ptr<SequenceDofContainer>& MoFEM::Problem::getColDofsSequence

(

)

const

Get reference to sequence data numbered dof container.

In sequence data container data are physically stored. The purpose of this is to allocate NumeredDofEntity data in bulk, having only one allocation instead each time entity is inserted. That makes code efficient.

The vector in sequence is destroyed if last entity inside that vector is destroyed. All MoFEM::NumeredDofEntity have aliased shared_ptr which points to the vector.

Returns

MoFEM::Problem::SequenceDofContainer

Definition at line 820 of file ProblemsMultiIndices.hpp.

                                                                           {
    return sequenceColDofContainer;
  }

getComposedProblemsData()

boost::shared_ptr<ComposedProblemsData>& MoFEM::Problem::getComposedProblemsData

(

)

const

Het composed problems data structure.

Definition at line 224 of file ProblemsMultiIndices.hpp.

                                  {
    return composedProblemsData;
  }

getDofByNameEntAndEntDofIdx()

MoFEMErrorCode MoFEM::Problem::getDofByNameEntAndEntDofIdx	(	const string	name,
		const EntityHandle	ent,
		const int	ent_dof_idx,
		const RowColData	row_or_col,
		boost::shared_ptr< NumeredDofEntity > &	dof_ptr
	)		const

get DOFs from problem

Note that ent_dof_idx is not coefficient number, is local number of DOFs on the entity. The coefficient number and local index of DOFs or entity are the same on vertices and H1 approximation.

Parameters

name	field name
ent	entity handle
ent_dof_idx	index of DOFs on entity
row_or_col	ROW or COL
dof_ptr	shared pointer to DOFs if found

Returns

error code

Examples

cell_forces.cpp.

Definition at line 155 of file ProblemsMultiIndices.cpp.

                                                      {
  MoFEMFunctionBegin;
  decltype(numeredDofsRows) numered_dofs;
  switch (row_or_col) {
  case ROW:
    if (!numeredDofsRows) {
      SETERRQ(PETSC_COMM_SELF, MOFEM_INVALID_DATA,
              "Row numbered index in problem not allocated");
    }
    numered_dofs = numeredDofsRows;
    break;
  case COL:
    if (!numeredDofsCols) {
      SETERRQ(PETSC_COMM_SELF, MOFEM_INVALID_DATA,
              "Col numbered index in problem not allocated");
    }
    numered_dofs = numeredDofsCols;
    break;
  default:
    SETERRQ(PETSC_COMM_SELF, MOFEM_INVALID_DATA,
            "Only ROW and COL is possible for 3rd argument");
  }
  auto it =
      numered_dofs->get<Composite_Name_And_Ent_And_EntDofIdx_mi_tag>().find(
          boost::make_tuple(name, ent, ent_dof_idx));
  if (it !=
      numered_dofs->get<Composite_Name_And_Ent_And_EntDofIdx_mi_tag>().end()) {
    dof_ptr = *it;
  } else {
    dof_ptr = boost::shared_ptr<NumeredDofEntity>();
  }
  MoFEMFunctionReturn(0);
}

getId()

BitProblemId MoFEM::Problem::getId

(

)

const

Definition at line 670 of file ProblemsMultiIndices.hpp.

{ return *((BitProblemId *)tagId); }

getMaskBitRefLevel()

BitRefLevel MoFEM::Problem::getMaskBitRefLevel

(

)

const

Definition at line 684 of file ProblemsMultiIndices.hpp.

{ return *tagMaskBitRefLevel; }

getName()

std::string MoFEM::Problem::getName

(

)

const

Examples

EshelbianPlasticity.cpp, field_evaluator.cpp, lorentz_force.cpp, and Remodeling.cpp.

Definition at line 672 of file ProblemsMultiIndices.hpp.

                                   {
    return std::string((char *)tagName, tagNameSize);
  }

getNbDofsCol()

DofIdx MoFEM::Problem::getNbDofsCol

(

)

const

Definition at line 677 of file ProblemsMultiIndices.hpp.

{ return nbDofsCol; }

getNbDofsRow()

DofIdx MoFEM::Problem::getNbDofsRow

(

)

const

Definition at line 676 of file ProblemsMultiIndices.hpp.

{ return nbDofsRow; }

getNbGhostDofsCol()

DofIdx MoFEM::Problem::getNbGhostDofsCol

(

)

const

Definition at line 681 of file ProblemsMultiIndices.hpp.

{ return nbGhostDofsCol; }

getNbGhostDofsRow()

DofIdx MoFEM::Problem::getNbGhostDofsRow

(

)

const

Definition at line 680 of file ProblemsMultiIndices.hpp.

{ return nbGhostDofsRow; }

getNbLocalDofsCol()

DofIdx MoFEM::Problem::getNbLocalDofsCol

(

)

const

Definition at line 679 of file ProblemsMultiIndices.hpp.

{ return nbLocDofsCol; }

getNbLocalDofsRow()

DofIdx MoFEM::Problem::getNbLocalDofsRow

(

)

const

Definition at line 678 of file ProblemsMultiIndices.hpp.

{ return nbLocDofsRow; }

getNumberOfElementsByNameAndPart()

MoFEMErrorCode MoFEM::Problem::getNumberOfElementsByNameAndPart	(	MPI_Comm	comm,
		const std::string	name,
		PetscLayout *	layout
	)		const

Get number of finite elements by name on processors.

Size retuned IS is equal to size of processors.

What PetscLayout see, http://www.mcs.anl.gov/petsc/petsc-current/docs/manualpages/IS/index.html

Example of usage for layout

PetscInt rstart, rend;
ierr = PetscLayoutGetRange(layout, &rstart, &rend); CHKERRG(ierr);
int global_size;
ierr = PetscLayoutGetSize(layout,&global_size); CHKERRG(ierr);

Parameters

comm	Communicator
name	Finite element name
layout	Get number of elements on each processor

Returns

error code

Definition at line 121 of file ProblemsMultiIndices.cpp.

                                                                     {
  MoFEMFunctionBegin;
  int size, rank;
  MPI_Comm_size(comm, &size);
  MPI_Comm_rank(comm, &rank);
  CHKERR PetscLayoutCreate(comm, layout);
  CHKERR PetscLayoutSetBlockSize(*layout, 1);
  const NumeredEntFiniteElementbyNameAndPart &fe_by_name_and_part =
      numeredFiniteElements->get<Composite_Name_And_Part_mi_tag>();
  int nb_elems;
  nb_elems = fe_by_name_and_part.count(boost::make_tuple(name, rank));
  CHKERR PetscLayoutSetLocalSize(*layout, nb_elems);
  CHKERR PetscLayoutSetUp(*layout);
  MoFEMFunctionReturn(0);
}

getNumberOfElementsByPart()

MoFEMErrorCode MoFEM::Problem::getNumberOfElementsByPart	(	MPI_Comm	comm,
		PetscLayout *	layout
	)		const

Get number of finite elements on processors.

Size retuned IS is equal to size of processors.

What PetscLayout see, http://www.mcs.anl.gov/petsc/petsc-current/docs/manualpages/IS/index.html

Example of usage for layout

PetscInt rstart, rend;
ierr = PetscLayoutGetRange(layout, &rstart, &rend); CHKERRG(ierr);
int global_size;
ierr = PetscLayoutGetSize(layout,&global_size); CHKERRG(ierr);

Parameters

comm	Communicator
layout	Get number of elements on each processor

Returns

error code

Definition at line 138 of file ProblemsMultiIndices.cpp.

                                                                             {
  MoFEMFunctionBegin;
  int size, rank;
  MPI_Comm_size(comm, &size);
  MPI_Comm_rank(comm, &rank);
  CHKERR PetscLayoutCreate(comm, layout);
  CHKERR PetscLayoutSetBlockSize(*layout, 1);
  typedef NumeredEntFiniteElement_multiIndex::index<Part_mi_tag>::type FeByPart;
  const FeByPart &fe_by_part = numeredFiniteElements->get<Part_mi_tag>();
  int nb_elems;
  nb_elems = fe_by_part.count(rank);
  CHKERR PetscLayoutSetLocalSize(*layout, nb_elems);
  CHKERR PetscLayoutSetUp(*layout);
  MoFEMFunctionReturn(0);
}

getNumeredDofsCols()

const boost::shared_ptr<NumeredDofEntity_multiIndex>& MoFEM::Problem::getNumeredDofsCols

(

)

const

get access to numeredDofsCols storing DOFs on cols

Definition at line 116 of file ProblemsMultiIndices.hpp.

                             {
    return numeredDofsCols;
  }

getNumeredDofsColsBegin() [1/4]

NumeredDofEntity_multiIndex::iterator MoFEM::Problem::getNumeredDofsColsBegin

(

)

const

get begin iterator for numeredDofsCols (insted you can use #_IT_NUMEREDDOFMOFEMENTITY_COL_FOR_LOOP_ for loops)

Definition at line 322 of file ProblemsMultiIndices.hpp.

                                                                      {
    return numeredDofsCols->begin();
  }

getNumeredDofsColsBegin() [2/4]

NumeredDofEntityByFieldName::iterator MoFEM::Problem::getNumeredDofsColsBegin

(

const std::string &

name

)

const

get begin iterator for numeredDofsCols (insted you can use _IT_NUMEREDDOF_COL_BY_NAME_FOR_LOOP_ for loops)

Definition at line 508 of file ProblemsMultiIndices.hpp.

                                                       {
    return numeredDofsCols->get<FieldName_mi_tag>().lower_bound(name);
  }

getNumeredDofsColsBegin() [3/4]

NumeredDofEntityByNameEntAndPart::iterator MoFEM::Problem::getNumeredDofsColsBegin	(	const std::string &	name,
		const EntityHandle	ent,
		const int	part
	)		const

get begin iterator for numeredDofsCols (insted you can use _IT_NUMEREDDOF_COL_BY_NAME_ENT_PART_FOR_LOOP_ for loops)

Definition at line 578 of file ProblemsMultiIndices.hpp.

                                                {
    return numeredDofsCols->get<Composite_Name_Ent_And_Part_mi_tag>()
        .lower_bound(boost::make_tuple(name, ent, part));
  }

getNumeredDofsColsBegin() [4/4]

NumeredDofEntity_multiIndex::iterator MoFEM::Problem::getNumeredDofsColsBegin

(

const int

part

)

const

get begin iterator for numeredDofsRows (insted you can use _IT_NUMEREDDOF_COL_BY_PART_FOR_LOOP_ for loops)

Definition at line 653 of file ProblemsMultiIndices.hpp.

                                                {
    return numeredDofsRows->get<Unique_mi_tag>().lower_bound(
        DofEntity::getGlobalUniqueIdCalculate_Low_Proc(part));
  }

getNumeredDofsColsByEntBegin()

NumeredDofEntityByEnt::iterator MoFEM::Problem::getNumeredDofsColsByEntBegin

(

const EntityHandle

ent

)

const

get begin iterator for numeredDofsCols (insted you can use _IT_NUMEREDDOF_COL_BY_ENT_FOR_LOOP_ for loops)

Definition at line 446 of file ProblemsMultiIndices.hpp.

                                                             {
    return numeredDofsCols->get<Ent_mi_tag>().lower_bound(ent);
  }

getNumeredDofsColsByEntEnd()

NumeredDofEntityByEnt::iterator MoFEM::Problem::getNumeredDofsColsByEntEnd

(

const EntityHandle

ent

)

const

get end iterator for numeredDofsCols (insted you can use _IT_NUMEREDDOF_COL_BY_ENT_FOR_LOOP_ for loops)

Definition at line 453 of file ProblemsMultiIndices.hpp.

                                                           {
    return numeredDofsCols->get<Ent_mi_tag>().upper_bound(ent);
  }

getNumeredDofsColsByLocIdxBegin()

NumeredDofEntityByLocalIdx::iterator MoFEM::Problem::getNumeredDofsColsByLocIdxBegin

(

const DofIdx

locidx

)

const

get begin iterator for numeredDofsCols (insted you can use _IT_NUMEREDDOF_COL_FOR_LOOP_ for loops)

Definition at line 384 of file ProblemsMultiIndices.hpp.

                                                             {
    return numeredDofsCols->get<PetscLocalIdx_mi_tag>().lower_bound(locidx);
  }

getNumeredDofsColsByLocIdxEnd()

NumeredDofEntityByLocalIdx::iterator MoFEM::Problem::getNumeredDofsColsByLocIdxEnd

(

const DofIdx

locidx

)

const

get end iterator for numeredDofsCols (insted you can use _IT_NUMEREDDOF_COL_FOR_LOOP_ for loops)

Definition at line 391 of file ProblemsMultiIndices.hpp.

                                                           {
    return numeredDofsCols->get<PetscLocalIdx_mi_tag>().upper_bound(locidx);
  }

getNumeredDofsColsEnd() [1/4]

NumeredDofEntity_multiIndex::iterator MoFEM::Problem::getNumeredDofsColsEnd

(

)

const

get end iterator for numeredDofsCols (insted you can use #_IT_NUMEREDDOFMOFEMENTITY_COL_FOR_LOOP_ for loops)

Definition at line 328 of file ProblemsMultiIndices.hpp.

                                                                    {
    return numeredDofsCols->end();
  }

getNumeredDofsColsEnd() [2/4]

NumeredDofEntityByFieldName::iterator MoFEM::Problem::getNumeredDofsColsEnd

(

const std::string &

name

)

const

get end iterator for numeredDofsCols (insted you can use _IT_NUMEREDDOF_COL_BY_NAME_FOR_LOOP_ for loops)

Definition at line 515 of file ProblemsMultiIndices.hpp.

                                                     {
    return numeredDofsCols->get<FieldName_mi_tag>().upper_bound(name);
  }

getNumeredDofsColsEnd() [3/4]

NumeredDofEntityByNameEntAndPart::iterator MoFEM::Problem::getNumeredDofsColsEnd	(	const std::string &	name,
		const EntityHandle	ent,
		const int	part
	)		const

get end iterator for numeredDofsCols (insted you can use _IT_NUMEREDDOF_COL_BY_NAME_ENT_PART_FOR_LOOP_ for loops)

Definition at line 587 of file ProblemsMultiIndices.hpp.

                                              {
    return numeredDofsCols->get<Composite_Name_Ent_And_Part_mi_tag>()
        .upper_bound(boost::make_tuple(name, ent, part));
  }

getNumeredDofsColsEnd() [4/4]

NumeredDofEntity_multiIndex::iterator MoFEM::Problem::getNumeredDofsColsEnd

(

const int

part

)

const

get end iterator for numeredDofsRows (insted you can use _IT_NUMEREDDOF_COL_BY_PART_FOR_LOOP_ for loops)

Definition at line 661 of file ProblemsMultiIndices.hpp.

                                              {
    return numeredDofsRows->get<Unique_mi_tag>().upper_bound(
        DofEntity::getGlobalUniqueIdCalculate_Hi_Proc(part));
  }

getNumeredDofsRows()

const boost::shared_ptr<NumeredDofEntity_multiIndex>& MoFEM::Problem::getNumeredDofsRows

(

)

const

get access to numeredDofsRows storing DOFs on rows

Definition at line 108 of file ProblemsMultiIndices.hpp.

                             {
    return numeredDofsRows;
  }

getNumeredDofsRowsBegin() [1/4]

NumeredDofEntity_multiIndex::iterator MoFEM::Problem::getNumeredDofsRowsBegin

(

)

const

get begin iterator for numeredDofsRows (insted you can use #_IT_NUMEREDDOFMOFEMENTITY_ROW_FOR_LOOP_ for loops)

Definition at line 310 of file ProblemsMultiIndices.hpp.

                                                                      {
    return numeredDofsRows->begin();
  }

getNumeredDofsRowsBegin() [2/4]

NumeredDofEntityByFieldName::iterator MoFEM::Problem::getNumeredDofsRowsBegin

(

const std::string &

name

)

const

get begin iterator for numeredDofsRows (insted you can use _IT_NUMEREDDOF_ROW_BY_NAME_FOR_LOOP_ for loops)

Definition at line 494 of file ProblemsMultiIndices.hpp.

                                                       {
    return numeredDofsRows->get<FieldName_mi_tag>().lower_bound(name);
  }

getNumeredDofsRowsBegin() [3/4]

NumeredDofEntityByNameEntAndPart::iterator MoFEM::Problem::getNumeredDofsRowsBegin	(	const std::string &	name,
		const EntityHandle	ent,
		const int	part
	)		const

get begin iterator for numeredDofsRows (insted you can use _IT_NUMEREDDOF_ROW_BY_NAME_ENT_PART_FOR_LOOP_ for loops)

Definition at line 560 of file ProblemsMultiIndices.hpp.

                                                {
    return numeredDofsRows->get<Composite_Name_Ent_And_Part_mi_tag>()
        .lower_bound(boost::make_tuple(name, ent, part));
  }

getNumeredDofsRowsBegin() [4/4]

NumeredDofEntity_multiIndex::iterator MoFEM::Problem::getNumeredDofsRowsBegin

(

const int

part

)

const

get begin iterator for numeredDofsRows (insted you can use _IT_NUMEREDDOF_ROW_BY_OWNPROC_FOR_LOOP_ for loops)

Definition at line 616 of file ProblemsMultiIndices.hpp.

                                                {
    return numeredDofsRows->get<Unique_mi_tag>().lower_bound(
        DofEntity::getGlobalUniqueIdCalculate_Low_Proc(part));
  }

getNumeredDofsRowsByEntBegin()

NumeredDofEntityByEnt::iterator MoFEM::Problem::getNumeredDofsRowsByEntBegin

(

const EntityHandle

ent

)

const

get begin iterator for numeredDofsRows (insted you can use _IT_NUMEREDDOF_ROW_BY_ENT_FOR_LOOP_ for loops)

Definition at line 432 of file ProblemsMultiIndices.hpp.

                                                             {
    return numeredDofsRows->get<Ent_mi_tag>().lower_bound(ent);
  }

getNumeredDofsRowsByEntEnd()

NumeredDofEntityByEnt::iterator MoFEM::Problem::getNumeredDofsRowsByEntEnd

(

const EntityHandle

ent

)

const

get end iterator for numeredDofsRows (insted you can use _IT_NUMEREDDOF_ROW_BY_ENT_FOR_LOOP_ for loops)

Definition at line 439 of file ProblemsMultiIndices.hpp.

                                                           {
    return numeredDofsRows->get<Ent_mi_tag>().upper_bound(ent);
  }

getNumeredDofsRowsByLocIdxBegin()

NumeredDofEntityByLocalIdx::iterator MoFEM::Problem::getNumeredDofsRowsByLocIdxBegin

(

const DofIdx

locidx

)

const

get begin iterator for numeredDofsRows (insted you can use _IT_NUMEREDDOF_ROW_FOR_LOOP_ for loops)

Definition at line 370 of file ProblemsMultiIndices.hpp.

                                                             {
    return numeredDofsRows->get<PetscLocalIdx_mi_tag>().lower_bound(locidx);
  }

getNumeredDofsRowsByLocIdxEnd()

NumeredDofEntityByLocalIdx::iterator MoFEM::Problem::getNumeredDofsRowsByLocIdxEnd

(

const DofIdx

locidx

)

const

get end iterator for numeredDofsRows (insted you can use _IT_NUMEREDDOF_ROW_FOR_LOOP_ for loops)

Definition at line 377 of file ProblemsMultiIndices.hpp.

                                                           {
    return numeredDofsRows->get<PetscLocalIdx_mi_tag>().upper_bound(locidx);
  }

getNumeredDofsRowsEnd() [1/4]

NumeredDofEntity_multiIndex::iterator MoFEM::Problem::getNumeredDofsRowsEnd

(

)

const

get end iterator for numeredDofsRows (insted you can use #_IT_NUMEREDDOFMOFEMENTITY_ROW_FOR_LOOP_ for loops)

Definition at line 316 of file ProblemsMultiIndices.hpp.

                                                                    {
    return numeredDofsRows->end();
  }

getNumeredDofsRowsEnd() [2/4]

NumeredDofEntityByFieldName::iterator MoFEM::Problem::getNumeredDofsRowsEnd

(

const std::string &

name

)

const

get end iterator for numeredDofsRows (insted you can use _IT_NUMEREDDOF_ROW_BY_NAME_FOR_LOOP_ for loops)

Definition at line 501 of file ProblemsMultiIndices.hpp.

                                                     {
    return numeredDofsRows->get<FieldName_mi_tag>().upper_bound(name);
  }

getNumeredDofsRowsEnd() [3/4]

NumeredDofEntityByNameEntAndPart::iterator MoFEM::Problem::getNumeredDofsRowsEnd	(	const std::string &	name,
		const EntityHandle	ent,
		const int	part
	)		const

get end iterator for numeredDofsRows (insted you can use _IT_NUMEREDDOF_ROW_BY_NAME_ENT_PART_FOR_LOOP_ for loops)

Definition at line 569 of file ProblemsMultiIndices.hpp.

                                              {
    return numeredDofsRows->get<Composite_Name_Ent_And_Part_mi_tag>()
        .upper_bound(boost::make_tuple(name, ent, part));
  }

getNumeredDofsRowsEnd() [4/4]

NumeredDofEntity_multiIndex::iterator MoFEM::Problem::getNumeredDofsRowsEnd

(

const int

part

)

const

get end iterator for numeredDofsRows (insted you can use _IT_NUMEREDDOF_ROW_BY_OWNPROC_FOR_LOOP_ for loops)

Definition at line 624 of file ProblemsMultiIndices.hpp.

                                              {
    return numeredDofsRows->get<Unique_mi_tag>().upper_bound(
        DofEntity::getGlobalUniqueIdCalculate_Hi_Proc(part));
  }

getNumeredFEsBegin()

NumeredEntFiniteElementbyName::iterator MoFEM::Problem::getNumeredFEsBegin

(

std::string

fe_name

)

const

Definition at line 263 of file ProblemsMultiIndices.hpp.

                                              {
    return numeredFiniteElements->get<FiniteElement_name_mi_tag>().lower_bound(
        fe_name);
  }

getNumeredFEsEnd()

NumeredEntFiniteElementbyName::iterator MoFEM::Problem::getNumeredFEsEnd

(

std::string

fe_name

)

const

Definition at line 269 of file ProblemsMultiIndices.hpp.

                                            {
    return numeredFiniteElements->get<FiniteElement_name_mi_tag>().upper_bound(
        fe_name);
  }

getNumeredFiniteElements()

const boost::shared_ptr<NumeredEntFiniteElement_multiIndex>& MoFEM::Problem::getNumeredFiniteElements

(

)

const

get access to reference for multi-index storing finite elements

Definition at line 124 of file ProblemsMultiIndices.hpp.

                                   {
    return numeredFiniteElements;
  }

getRowDofsByPetscGlobalDofIdx() [1/2]

MoFEMErrorCode MoFEM::Problem::getRowDofsByPetscGlobalDofIdx	(	DofIdx	idx,
		const NumeredDofEntity **	dof_ptr,
		MoFEMTypes	bh = MF_EXIST
	)		const

Get the Row Dofs By Petsc Global Dof Idx object.

Parameters

idx
dof_ptr
bh

Returns

MoFEMErrorCode

Definition at line 92 of file ProblemsMultiIndices.cpp.

                                                                       {
  MoFEMFunctionBeginHot;
  auto weak_dof_ptr = getRowDofsByPetscGlobalDofIdx(idx);
  if (auto shared_dof_ptr = weak_dof_ptr.lock()) {
    *dof_ptr = shared_dof_ptr.get();
  } else {
    if (bh == MF_EXIST)
      SETERRQ1(PETSC_COMM_SELF, MOFEM_NOT_FOUND, "row dof <%d> not found", idx);
    *dof_ptr = nullptr;
  }
  MoFEMFunctionReturnHot(0);
}

getRowDofsByPetscGlobalDofIdx() [2/2]

boost::weak_ptr< NumeredDofEntity > MoFEM::Problem::getRowDofsByPetscGlobalDofIdx

(

DofIdx

idx

)

const

Get the Row Dofs By Petsc Global Dof Idx object.

Parameters

idx

Returns

boost::weak_ptr<NumeredDofEntity>

Definition at line 71 of file ProblemsMultiIndices.cpp.

                                                       {
  MoFEMFunctionBeginHot;
  boost::weak_ptr<NumeredDofEntity> dof_weak_ptr;
  NumeredDofEntity_multiIndex::index<PetscGlobalIdx_mi_tag>::type::iterator dit;
  dit = numeredDofsRows->get<PetscGlobalIdx_mi_tag>().find(idx);
  if (dit != numeredDofsRows->get<PetscGlobalIdx_mi_tag>().end())
    dof_weak_ptr = *dit;
  return dof_weak_ptr;
}

getRowDofsSequence()

boost::shared_ptr<SequenceDofContainer>& MoFEM::Problem::getRowDofsSequence

(

)

const

Get reference to sequence data numbered dof container.

In sequence data container data are physically stored. The purpose of this is to allocate NumeredDofEntity data in bulk, having only one allocation instead each time entity is inserted. That makes code efficient.

The vector in sequence is destroyed if last entity inside that vector is destroyed. All MoFEM::NumeredDofEntity have aliased shared_ptr which points to the vector.

Returns

MoFEM::Problem::SequenceDofContainer

Definition at line 802 of file ProblemsMultiIndices.hpp.

                                                                           {
    return sequenceRowDofContainer;
  }

getSubData()

boost::shared_ptr<SubProblemData>& MoFEM::Problem::getSubData

(

)

const

Get main problem of sub-problem is.

Returns

sub problem data structure

Examples

cell_forces.cpp.

Definition at line 211 of file ProblemsMultiIndices.hpp.

                                                             {
    return subProblemData;
  }

Friends And Related Function Documentation

operator<<

std::ostream& operator<< ( std::ostream &  os, const Problem &  e  )

friend

Definition at line 62 of file ProblemsMultiIndices.cpp.

                                                         {
  os << "problem id " << e.getId() << " FiniteElement id " << e.getBitFEId()
     << " name " << e.getName();
  return os;
}

Member Data Documentation

composedProblemsData

boost::shared_ptr<ComposedProblemsData> MoFEM::Problem::composedProblemsData

mutable

Pointer to data structure from which this problem is composed

Definition at line 218 of file ProblemsMultiIndices.hpp.

meshset

EntityHandle MoFEM::Problem::meshset

Problem meshset (on tag of this meshset all data related to problem are stored)

Definition at line 81 of file ProblemsMultiIndices.hpp.

nbDofsCol

DofIdx MoFEM::Problem::nbDofsCol

mutable

Global number of DOFs in col.

Definition at line 91 of file ProblemsMultiIndices.hpp.

nbDofsRow

DofIdx MoFEM::Problem::nbDofsRow

mutable

Global number of DOFs in row.

Definition at line 90 of file ProblemsMultiIndices.hpp.

nbGhostDofsCol

DofIdx MoFEM::Problem::nbGhostDofsCol

mutable

Number of ghost DOFs in col.

Definition at line 95 of file ProblemsMultiIndices.hpp.

nbGhostDofsRow

DofIdx MoFEM::Problem::nbGhostDofsRow

mutable

Number of ghost DOFs in row.

Definition at line 94 of file ProblemsMultiIndices.hpp.

nbLocDofsCol

DofIdx MoFEM::Problem::nbLocDofsCol

mutable

Local number of DOFs in colIs.

Definition at line 93 of file ProblemsMultiIndices.hpp.

nbLocDofsRow

DofIdx MoFEM::Problem::nbLocDofsRow

mutable

Local number of DOFs in row.

Definition at line 92 of file ProblemsMultiIndices.hpp.

numeredDofsCols

boost::shared_ptr<NumeredDofEntity_multiIndex> MoFEM::Problem::numeredDofsCols

mutable

store DOFs on columns for this problem

Definition at line 100 of file ProblemsMultiIndices.hpp.

numeredDofsRows

boost::shared_ptr<NumeredDofEntity_multiIndex> MoFEM::Problem::numeredDofsRows

mutable

store DOFs on rows for this problem

Definition at line 98 of file ProblemsMultiIndices.hpp.

numeredFiniteElements

boost::shared_ptr<NumeredEntFiniteElement_multiIndex> MoFEM::Problem::numeredFiniteElements

mutable

store finite elements

Definition at line 102 of file ProblemsMultiIndices.hpp.

sequenceColDofContainer

boost::shared_ptr<SequenceDofContainer> MoFEM::Problem::sequenceColDofContainer

mutableprivate

Definition at line 827 of file ProblemsMultiIndices.hpp.

sequenceRowDofContainer

boost::shared_ptr<SequenceDofContainer> MoFEM::Problem::sequenceRowDofContainer

mutableprivate

Definition at line 826 of file ProblemsMultiIndices.hpp.

subProblemData

boost::shared_ptr<SubProblemData> MoFEM::Problem::subProblemData

mutable

Pointer to data structure. This pointer has allocated data only for sub problems.

Examples

EshelbianPlasticity.cpp.

Definition at line 205 of file ProblemsMultiIndices.hpp.

tagBitFEId

BitFEId* MoFEM::Problem::tagBitFEId

IDs of finite elements in problem.

Definition at line 86 of file ProblemsMultiIndices.hpp.

tagBitRefLevel

BitRefLevel* MoFEM::Problem::tagBitRefLevel

BitRef level of finite elements in problem.

Definition at line 87 of file ProblemsMultiIndices.hpp.

tagId

BitProblemId* MoFEM::Problem::tagId

Unique problem ID.

Definition at line 83 of file ProblemsMultiIndices.hpp.

tagMaskBitRefLevel

BitRefLevel* MoFEM::Problem::tagMaskBitRefLevel

BItRefMask of elements in problem.

Definition at line 88 of file ProblemsMultiIndices.hpp.

tagName

const char* MoFEM::Problem::tagName

Problem name.

Definition at line 84 of file ProblemsMultiIndices.hpp.

tagNameSize

int MoFEM::Problem::tagNameSize

Size of problem name.

Definition at line 85 of file ProblemsMultiIndices.hpp.

---

The documentation for this struct was generated from the following files:

• src/multi_indices/ProblemsMultiIndices.hpp
• src/multi_indices/impl/ProblemsMultiIndices.cpp