MoFEM::Problem Struct Reference

keeps basic data about problemThis is low level structure with information about problem, what elements compose problem and what DOFs are on rows and columns. More...

#include <src/multi_indices/ProblemsMultiIndices.hpp>

Collaboration diagram for MoFEM::Problem:

Classes
struct	SubProblemData
	Subproblem problem data. More...

Public Types
typedef multi_index_container< boost::weak_ptr< std::vector< NumeredDofEntity > >, indexed_by< sequenced<> > >	SequenceDofContainer

Public Member Functions
const boost::shared_ptr< NumeredDofEntity_multiIndex > &	getNumeredDofsRows () const
	get access to numeredDofsRows storing DOFs on rows More...
const boost::shared_ptr< NumeredDofEntity_multiIndex > &	getNumeredDofsCols () const
	get access to numeredDofsCols storing DOFs on cols More...
const NumeredEntFiniteElement_multiIndex &	getNumeredFiniteElements () const
	get access to reference for multi-index storing finite elements More...
boost::shared_ptr< SubProblemData >	getSubData () const
	Get main problem of sub-problem is. More...
boost::shared_ptr< ComposedProblemsData >	getComposedProblemsData () const
	Het composed problems data structure. More...
PetscErrorCode	getDofByNameEntAndEntDofIdx (const string name, const EntityHandle ent, const int ent_dof_idx, const RowColData row_or_col, boost::shared_ptr< NumeredDofEntity > &dof_ptr) const
	get DOFs from problem More...
NumeredEntFiniteElementbyName::iterator	getNumeredFEsBegin (std::string fe_name) const
NumeredEntFiniteElementbyName::iterator	getNumeredFEsEnd (std::string fe_name) const
NumeredDofEntity_multiIndex::iterator	getNumeredDofsRowsBegin () const
	get begin iterator for numeredDofsRows (insted you can use #_IT_NUMEREDDOFMOFEMENTITY_ROW_FOR_LOOP_ for loops) More...
NumeredDofEntity_multiIndex::iterator	getNumeredDofsRowsEnd () const
	get end iterator for numeredDofsRows (insted you can use #_IT_NUMEREDDOFMOFEMENTITY_ROW_FOR_LOOP_ for loops) More...
NumeredDofEntity_multiIndex::iterator	getNumeredDofsColsBegin () const
	get begin iterator for numeredDofsCols (insted you can use #_IT_NUMEREDDOFMOFEMENTITY_COL_FOR_LOOP_ for loops) More...
NumeredDofEntity_multiIndex::iterator	getNumeredDofsColsEnd () const
	get end iterator for numeredDofsCols (insted you can use #_IT_NUMEREDDOFMOFEMENTITY_COL_FOR_LOOP_ for loops) More...
NumeredDofEntityByLocalIdx::iterator	getNumeredDofsRowsByLocIdxBegin (const DofIdx locidx) const
	get begin iterator for numeredDofsRows (insted you can use _IT_NUMEREDDOF_ROW_FOR_LOOP_ for loops) More...
NumeredDofEntityByLocalIdx::iterator	getNumeredDofsRowsByLocIdxEnd (const DofIdx locidx) const
	get end iterator for numeredDofsRows (insted you can use _IT_NUMEREDDOF_ROW_FOR_LOOP_ for loops) More...
NumeredDofEntityByLocalIdx::iterator	getNumeredDofsColsByLocIdxBegin (const DofIdx locidx) const
	get begin iterator for numeredDofsCols (insted you can use _IT_NUMEREDDOF_COL_FOR_LOOP_ for loops) More...
NumeredDofEntityByLocalIdx::iterator	getNumeredDofsColsByLocIdxEnd (const DofIdx locidx) const
	get end iterator for numeredDofsCols (insted you can use _IT_NUMEREDDOF_COL_FOR_LOOP_ for loops) More...
NumeredDofEntityByEnt::iterator	getNumeredDofsRowsByEntBegin (const EntityHandle ent) const
	get begin iterator for numeredDofsRows (insted you can use _IT_NUMEREDDOF_ROW_BY_ENT_FOR_LOOP_ for loops) More...
NumeredDofEntityByEnt::iterator	getNumeredDofsRowsByEntEnd (const EntityHandle ent) const
	get end iterator for numeredDofsRows (insted you can use _IT_NUMEREDDOF_ROW_BY_ENT_FOR_LOOP_ for loops) More...
NumeredDofEntityByEnt::iterator	getNumeredDofsColsByEntBegin (const EntityHandle ent) const
	get begin iterator for numeredDofsCols (insted you can use _IT_NUMEREDDOF_COL_BY_ENT_FOR_LOOP_ for loops) More...
NumeredDofEntityByEnt::iterator	getNumeredDofsColsByEntEnd (const EntityHandle ent) const
	get end iterator for numeredDofsCols (insted you can use _IT_NUMEREDDOF_COL_BY_ENT_FOR_LOOP_ for loops) More...
NumeredDofEntityByFieldName::iterator	getNumeredDofsRowsBegin (const std::string &name) const
	get begin iterator for numeredDofsRows (insted you can use _IT_NUMEREDDOF_ROW_BY_NAME_FOR_LOOP_ for loops) More...
NumeredDofEntityByFieldName::iterator	getNumeredDofsRowsEnd (const std::string &name) const
	get end iterator for numeredDofsRows (insted you can use _IT_NUMEREDDOF_ROW_BY_NAME_FOR_LOOP_ for loops) More...
NumeredDofEntityByFieldName::iterator	getNumeredDofsColsBegin (const std::string &name) const
	get begin iterator for numeredDofsCols (insted you can use _IT_NUMEREDDOF_COL_BY_NAME_FOR_LOOP_ for loops) More...
NumeredDofEntityByFieldName::iterator	getNumeredDofsColsEnd (const std::string &name) const
	get end iterator for numeredDofsCols (insted you can use _IT_NUMEREDDOF_COL_BY_NAME_FOR_LOOP_ for loops) More...
NumeredDofEntityByNameEntAndPart::iterator	getNumeredDofsRowsBegin (const std::string &name, const EntityHandle ent, const int part) const
	get begin iterator for numeredDofsRows (insted you can use _IT_NUMEREDDOF_ROW_BY_NAME_ENT_PART_FOR_LOOP_ for loops) More...
NumeredDofEntityByNameEntAndPart::iterator	getNumeredDofsRowsEnd (const std::string &name, const EntityHandle ent, const int part) const
	get end iterator for numeredDofsRows (insted you can use _IT_NUMEREDDOF_ROW_BY_NAME_ENT_PART_FOR_LOOP_ for loops) More...
NumeredDofEntityByNameEntAndPart::iterator	getNumeredDofsColsBegin (const std::string &name, const EntityHandle ent, const int part) const
	get begin iterator for numeredDofsCols (insted you can use _IT_NUMEREDDOF_COL_BY_NAME_ENT_PART_FOR_LOOP_ for loops) More...
NumeredDofEntityByNameEntAndPart::iterator	getNumeredDofsColsEnd (const std::string &name, const EntityHandle ent, const int part) const
	get end iterator for numeredDofsCols (insted you can use _IT_NUMEREDDOF_COL_BY_NAME_ENT_PART_FOR_LOOP_ for loops) More...
NumeredDofEntity_multiIndex::iterator	getNumeredDofsRowsBegin (const int part) const
	get begin iterator for numeredDofsRows (insted you can use _IT_NUMEREDDOF_ROW_BY_OWNPROC_FOR_LOOP_ for loops) More...
NumeredDofEntity_multiIndex::iterator	getNumeredDofsRowsEnd (const int part) const
	get end iterator for numeredDofsRows (insted you can use _IT_NUMEREDDOF_ROW_BY_OWNPROC_FOR_LOOP_ for loops) More...
NumeredDofEntity_multiIndex::iterator	getNumeredDofsColsBegin (const int part) const
	get begin iterator for numeredDofsRows (insted you can use _IT_NUMEREDDOF_COL_BY_PART_FOR_LOOP_ for loops) More...
NumeredDofEntity_multiIndex::iterator	getNumeredDofsColsEnd (const int part) const
	get end iterator for numeredDofsRows (insted you can use _IT_NUMEREDDOF_COL_BY_PART_FOR_LOOP_ for loops) More...
	Problem (Interface &moab, const EntityHandle meshset)
virtual	~Problem ()
BitProblemId	getId () const
std::string	getName () const
DofIdx	getNbDofsRow () const
DofIdx	getNbDofsCol () const
DofIdx	getNbLocalDofsRow () const
DofIdx	getNbLocalDofsCol () const
DofIdx	getNbGhostDofsRow () const
DofIdx	getNbGhostDofsCol () const
BitRefLevel	getBitRefLevel () const
BitRefLevel	getMaskBitRefLevel () const
PetscErrorCode	getRowDofsByPetscGlobalDofIdx (DofIdx idx, const NumeredDofEntity **dof_ptr) const
PetscErrorCode	getColDofsByPetscGlobalDofIdx (DofIdx idx, const NumeredDofEntity **dof_ptr) const
BitFEId	getBitFEId () const
PetscErrorCode	getNumberOfElementsByNameAndPart (MPI_Comm comm, const std::string name, PetscLayout *layout) const
	Get number of finite elements by name on processors. More...
PetscErrorCode	getNumberOfElementsByPart (MPI_Comm comm, PetscLayout *layout) const
	Get number of finite elements on processors. More...
boost::shared_ptr< SequenceDofContainer >	getRowDofsSeqence () const
	Get reference to sequence data numbered dof container. More...
boost::shared_ptr< SequenceDofContainer >	getColDofsSeqence () const
	Get reference to sequence data numbered dof container. More...

Public Attributes
EntityHandle	meshset
	Problem meshset (on tag of this meshset all data related to problem are stored) More...
BitProblemId *	tagId
	Unique problem ID. More...
const char *	tagName
	Problem name. More...
int	tagNameSize
	Size of problem name. More...
BitFEId *	tagBitFEId
	IDs of finite elements in problem. More...
BitRefLevel *	tagBitRefLevel
	BitRef level of finite elements in problem. More...
BitRefLevel *	tagMaskBitRefLevel
	BItRefMask of elements in problem. More...
DofIdx	nbDofsRow
	Global number of DOFs in row. More...
DofIdx	nbDofsCol
	Global number of DOFs in col. More...
DofIdx	nbLocDofsRow
	Local number of DOFs in row. More...
DofIdx	nbLocDofsCol
	Local number of DOFs in colIs. More...
DofIdx	nbGhostDofsRow
	Number of ghost DOFs in row. More...
DofIdx	nbGhostDofsCol
	Number of ghost DOFs in col. More...
boost::shared_ptr< NumeredDofEntity_multiIndex >	numeredDofsRows
	store DOFs on rows for this problem More...
boost::shared_ptr< NumeredDofEntity_multiIndex >	numeredDofsCols
	store DOFs on columns for this problem More...
NumeredEntFiniteElement_multiIndex	numeredFiniteElements
	store finite elements More...
boost::shared_ptr< SubProblemData >	subProblemData
boost::shared_ptr< ComposedProblemsData >	composedProblemsData

Private Attributes
boost::shared_ptr< SequenceDofContainer >	sequenceRowDofContainer
boost::shared_ptr< SequenceDofContainer >	sequenceColDofContainer

Friends
std::ostream &	operator<< (std::ostream &os, const Problem &e)

Detailed Description

keeps basic data about problem

This is low level structure with information about problem, what elements compose problem and what DOFs are on rows and columns.

Todo:

fix names following name convention

Examples:

cell_forces.cpp, and MagneticElement.hpp.

Definition at line 84 of file ProblemsMultiIndices.hpp.

Member Typedef Documentation

SequenceDofContainer

typedef multi_index_container< boost::weak_ptr<std::vector<NumeredDofEntity> >, indexed_by< sequenced<> > > MoFEM::Problem::SequenceDofContainer

Definition at line 641 of file ProblemsMultiIndices.hpp.

Constructor & Destructor Documentation

Problem()

MoFEM::Problem::Problem	(	Interface &	moab,
		const EntityHandle	meshset
	)

Definition at line 39 of file ProblemsMultiIndices.cpp.

                                                          :
  meshset(meshset),
  numeredDofsRows(boost::shared_ptr<NumeredDofEntity_multiIndex>(new NumeredDofEntity_multiIndex())),
  numeredDofsCols(boost::shared_ptr<NumeredDofEntity_multiIndex>(new NumeredDofEntity_multiIndex())),
  sequenceRowDofContainer(boost::make_shared<SequenceDofContainer>()),
  sequenceColDofContainer(boost::make_shared<SequenceDofContainer>()) {
  ErrorCode rval;
  Tag th_ProblemId;
  rval = moab.tag_get_handle("_ProblemId",th_ProblemId); MOAB_THROW(rval);
  rval = moab.tag_get_by_ptr(th_ProblemId,&meshset,1,(const void **)&tagId); MOAB_THROW(rval);
  Tag th_ProblemName;
  rval = moab.tag_get_handle("_ProblemName",th_ProblemName); MOAB_THROW(rval);
  rval = moab.tag_get_by_ptr(th_ProblemName,&meshset,1,(const void **)&tagName,&tagNameSize); MOAB_THROW(rval);
  Tag th_ProblemFEId;
  rval = moab.tag_get_handle("_ProblemFEId",th_ProblemFEId); MOAB_THROW(rval);
  rval = moab.tag_get_by_ptr(th_ProblemFEId,&meshset,1,(const void **)&tagBitFEId); MOAB_THROW(rval);
  Tag th_RefBitLevel;
  rval = moab.tag_get_handle("_RefBitLevel",th_RefBitLevel); MOAB_THROW(rval);
  rval = moab.tag_get_by_ptr(th_RefBitLevel,&meshset,1,(const void **)&tagBitRefLevel); MOAB_THROW(rval);
  Tag th_RefBitLevel_Mask;
  rval = moab.tag_get_handle("_RefBitLevelMask",th_RefBitLevel_Mask); MOAB_THROW(rval);
  rval = moab.tag_get_by_ptr(th_RefBitLevel_Mask,&meshset,1,(const void **)&tagMaskBitRefLevel); MOAB_THROW(rval);
}

~Problem()

MoFEM::Problem::~Problem ( )

virtual

Definition at line 63 of file ProblemsMultiIndices.cpp.

                  {
}

Member Function Documentation

getBitFEId()

BitFEId MoFEM::Problem::getBitFEId

(

)

const

Definition at line 73 of file ProblemsMultiIndices.cpp.

                                  {
  return *tagBitFEId;
}

getBitRefLevel()

BitRefLevel MoFEM::Problem::getBitRefLevel

(

)

const

Definition at line 579 of file ProblemsMultiIndices.hpp.

{ return *tagBitRefLevel; }

getColDofsByPetscGlobalDofIdx()

PetscErrorCode MoFEM::Problem::getColDofsByPetscGlobalDofIdx	(	DofIdx	idx,
		const NumeredDofEntity **	dof_ptr
	)		const

Definition at line 88 of file ProblemsMultiIndices.cpp.

                                                                                                       {
  PetscFunctionBegin;
  NumeredDofEntity_multiIndex::index<PetscGlobalIdx_mi_tag>::type::iterator dit;
  dit = numeredDofsCols->get<PetscGlobalIdx_mi_tag>().find(idx);
  if(dit==numeredDofsCols->get<PetscGlobalIdx_mi_tag>().end()) {
    SETERRQ1(PETSC_COMM_SELF,MOFEM_NOT_FOUND,"row dof <%d> not found",idx);
  }
  *dof_ptr = &*(*dit);
  PetscFunctionReturn(0);
}

getColDofsSeqence()

boost::shared_ptr<SequenceDofContainer> MoFEM::Problem::getColDofsSeqence

(

)

const

Get reference to sequence data numbered dof container.

In sequence data container data are physically stored. The purpose of this is to allocate NumeredDofEntity data in bulk, having only one allocation instead each time entity is inserted. That makes code efficient.

The vector in sequence is destroyed if last entity inside that vector is destroyed. All MoFEM::NumeredDofEntity have aliased shared_ptr which points to the vector.

Returns

MoFEM::Problem::SequenceDofContainer

Definition at line 671 of file ProblemsMultiIndices.hpp.

                                                                         {
    return sequenceColDofContainer;
  }

getComposedProblemsData()

boost::shared_ptr<ComposedProblemsData> MoFEM::Problem::getComposedProblemsData

(

)

const

Het composed problems data structure.

Definition at line 223 of file ProblemsMultiIndices.hpp.

                                                                               {
    return composedProblemsData;
  }

getDofByNameEntAndEntDofIdx()

PetscErrorCode MoFEM::Problem::getDofByNameEntAndEntDofIdx	(	const string	name,
		const EntityHandle	ent,
		const int	ent_dof_idx,
		const RowColData	row_or_col,
		boost::shared_ptr< NumeredDofEntity > &	dof_ptr
	)		const

get DOFs from problem

Note that ent_dof_idx is not coefficient number, is local number of DOFs on the entity. The coefficient number and local index of DOFs or entity are the same on vertices and H1 approximation.

Parameters

name	field name
ent	entity handle
ent_dof_idx	index of DOFs on entity
row_or_col	ROW or COL
dof_ptr	shared pointer to DOFs if found

Returns

error code

Examples:

cell_forces.cpp.

Definition at line 130 of file ProblemsMultiIndices.cpp.

        {
  PetscFunctionBegin;
  typedef NumeredDofEntity_multiIndex::index<
  Composite_Name_And_Ent_And_EntDofIdx_mi_tag
  >::type NumberdDofByNameEntAndEndDofIdx;
  NumberdDofByNameEntAndEndDofIdx::iterator it;
  // not use shared pointer is local here, direct pointer is more efficient
  NumeredDofEntity_multiIndex *numered_dofs;
  switch (row_or_col) {
    case ROW:
    if(!numeredDofsRows) {
      SETERRQ(PETSC_COMM_SELF,MOFEM_INVALID_DATA,"Row numbered index in problem not allocated");
    }
    numered_dofs = numeredDofsRows.get();
    break;
    case COL:
    if(!numeredDofsRows) {
      SETERRQ(PETSC_COMM_SELF,MOFEM_INVALID_DATA,"Col numbered index in problem not allocated");
    }
    numered_dofs = numeredDofsCols.get();
    break;
    default:
    SETERRQ(
      PETSC_COMM_SELF,MOFEM_INVALID_DATA,"Only ROW and COL is possible for 3rd argument"
    );
  }
  it = numered_dofs->get<Composite_Name_And_Ent_And_EntDofIdx_mi_tag>().find(
    boost::make_tuple(name,ent,ent_dof_idx)
  );
  if(it!=numered_dofs->get<Composite_Name_And_Ent_And_EntDofIdx_mi_tag>().end()) {
    dof_ptr = *it;
  } else {
    dof_ptr = boost::shared_ptr<NumeredDofEntity>();
  }
  PetscFunctionReturn(0);
}

getId()

BitProblemId MoFEM::Problem::getId

(

)

const

Definition at line 568 of file ProblemsMultiIndices.hpp.

{ return *((BitProblemId*)tagId); }

getMaskBitRefLevel()

BitRefLevel MoFEM::Problem::getMaskBitRefLevel

(

)

const

Definition at line 580 of file ProblemsMultiIndices.hpp.

{ return *tagMaskBitRefLevel; }

getName()

std::string MoFEM::Problem::getName

(

)

const

Definition at line 570 of file ProblemsMultiIndices.hpp.

{ return std::string((char *)tagName,tagNameSize); }

getNbDofsCol()

DofIdx MoFEM::Problem::getNbDofsCol

(

)

const

Definition at line 573 of file ProblemsMultiIndices.hpp.

{ return nbDofsCol; }

getNbDofsRow()

DofIdx MoFEM::Problem::getNbDofsRow

(

)

const

Definition at line 572 of file ProblemsMultiIndices.hpp.

{ return nbDofsRow; }

getNbGhostDofsCol()

DofIdx MoFEM::Problem::getNbGhostDofsCol

(

)

const

Definition at line 577 of file ProblemsMultiIndices.hpp.

{ return nbGhostDofsCol; }

getNbGhostDofsRow()

DofIdx MoFEM::Problem::getNbGhostDofsRow

(

)

const

Definition at line 576 of file ProblemsMultiIndices.hpp.

{ return nbGhostDofsRow; }

getNbLocalDofsCol()

DofIdx MoFEM::Problem::getNbLocalDofsCol

(

)

const

Definition at line 575 of file ProblemsMultiIndices.hpp.

{ return nbLocDofsCol; }

getNbLocalDofsRow()

DofIdx MoFEM::Problem::getNbLocalDofsRow

(

)

const

Definition at line 574 of file ProblemsMultiIndices.hpp.

{ return nbLocDofsRow; }

getNumberOfElementsByNameAndPart()

PetscErrorCode MoFEM::Problem::getNumberOfElementsByNameAndPart	(	MPI_Comm	comm,
		const std::string	name,
		PetscLayout *	layout
	)		const

Get number of finite elements by name on processors.

Size retuned IS is equal to size of processors.

What PetscLayout see, http://www.mcs.anl.gov/petsc/petsc-current/docs/manualpages/IS/index.html

Example of usage for layout

PetscInt rstart, rend;
ierr = PetscLayoutGetRange(layout, &rstart, &rend); CHKERRQ(ierr);
int global_size;
ierr = PetscLayoutGetSize(layout,&global_size); CHKERRQ(ierr);

Parameters

comm	Communicator
name	Finite element name
layout	Get number of elements on each processor

Returns

error code

Definition at line 99 of file ProblemsMultiIndices.cpp.

                                                                                                                     {
  PetscFunctionBegin;
  int size, rank;
  MPI_Comm_size(comm,&size);
  MPI_Comm_rank(comm,&rank);
  ierr = PetscLayoutCreate(comm,layout); CHKERRQ(ierr);
  ierr = PetscLayoutSetBlockSize(*layout,1); CHKERRQ(ierr);
  const NumeredEntFiniteElementbyNameAndPart &fe_by_name_and_part = numeredFiniteElements.get<Composite_Name_And_Part_mi_tag>();
  int nb_elems;
  nb_elems = fe_by_name_and_part.count(boost::make_tuple(name,rank));
  ierr = PetscLayoutSetLocalSize(*layout,nb_elems); CHKERRQ(ierr);
  ierr = PetscLayoutSetUp(*layout); CHKERRQ(ierr);
  PetscFunctionReturn(0);
}

getNumberOfElementsByPart()

PetscErrorCode MoFEM::Problem::getNumberOfElementsByPart	(	MPI_Comm	comm,
		PetscLayout *	layout
	)		const

Get number of finite elements on processors.

Size retuned IS is equal to size of processors.

What PetscLayout see, http://www.mcs.anl.gov/petsc/petsc-current/docs/manualpages/IS/index.html

Example of usage for layout

PetscInt rstart, rend;
ierr = PetscLayoutGetRange(layout, &rstart, &rend); CHKERRQ(ierr);
int global_size;
ierr = PetscLayoutGetSize(layout,&global_size); CHKERRQ(ierr);

Parameters

comm	Communicator
layout	Get number of elements on each processor

Returns

error code

Definition at line 114 of file ProblemsMultiIndices.cpp.

                                                                                         {
  PetscFunctionBegin;
  int size, rank;
  MPI_Comm_size(comm,&size);
  MPI_Comm_rank(comm,&rank);
  ierr = PetscLayoutCreate(comm,layout); CHKERRQ(ierr);
  ierr = PetscLayoutSetBlockSize(*layout,1); CHKERRQ(ierr);
  typedef NumeredEntFiniteElement_multiIndex::index<Part_mi_tag>::type FeByPart;
  const FeByPart &fe_by_part = numeredFiniteElements.get<Part_mi_tag>();
  int nb_elems;
  nb_elems = fe_by_part.count(rank);
  ierr = PetscLayoutSetLocalSize(*layout,nb_elems); CHKERRQ(ierr);
  ierr = PetscLayoutSetUp(*layout); CHKERRQ(ierr);
  PetscFunctionReturn(0);
}

getNumeredDofsCols()

const boost::shared_ptr<NumeredDofEntity_multiIndex>& MoFEM::Problem::getNumeredDofsCols

(

)

const

get access to numeredDofsCols storing DOFs on cols

Definition at line 115 of file ProblemsMultiIndices.hpp.

                                                                                 {
    return numeredDofsCols;
  }

getNumeredDofsColsBegin() [1/4]

NumeredDofEntity_multiIndex::iterator MoFEM::Problem::getNumeredDofsColsBegin

(

)

const

get begin iterator for numeredDofsCols (insted you can use #_IT_NUMEREDDOFMOFEMENTITY_COL_FOR_LOOP_ for loops)

Definition at line 307 of file ProblemsMultiIndices.hpp.

{ return numeredDofsCols->begin(); }

getNumeredDofsColsBegin() [2/4]

NumeredDofEntityByFieldName::iterator MoFEM::Problem::getNumeredDofsColsBegin

(

const std::string &

name

)

const

get begin iterator for numeredDofsCols (insted you can use _IT_NUMEREDDOF_COL_BY_NAME_FOR_LOOP_ for loops)

Definition at line 442 of file ProblemsMultiIndices.hpp.

  { return numeredDofsCols->get<FieldName_mi_tag>().lower_bound(name); }

getNumeredDofsColsBegin() [3/4]

NumeredDofEntityByNameEntAndPart::iterator MoFEM::Problem::getNumeredDofsColsBegin	(	const std::string &	name,
		const EntityHandle	ent,
		const int	part
	)		const

get begin iterator for numeredDofsCols (insted you can use _IT_NUMEREDDOF_COL_BY_NAME_ENT_PART_FOR_LOOP_ for loops)

Definition at line 490 of file ProblemsMultiIndices.hpp.

                                                                                                                                      {
    return numeredDofsCols->get<Composite_Name_Ent_And_Part_mi_tag>().lower_bound(boost::make_tuple(name,ent,part));
  }

getNumeredDofsColsBegin() [4/4]

NumeredDofEntity_multiIndex::iterator MoFEM::Problem::getNumeredDofsColsBegin

(

const int

part

)

const

get begin iterator for numeredDofsRows (insted you can use _IT_NUMEREDDOF_COL_BY_PART_FOR_LOOP_ for loops)

Definition at line 551 of file ProblemsMultiIndices.hpp.

                                                                                    {
    return numeredDofsRows->get<Unique_mi_tag>().lower_bound(
      DofEntity::getGlobalUniqueIdCalculate_Low_Proc(part)
    );
  }

getNumeredDofsColsByEntBegin()

NumeredDofEntityByEnt::iterator MoFEM::Problem::getNumeredDofsColsByEntBegin

(

const EntityHandle

ent

)

const

get begin iterator for numeredDofsCols (insted you can use _IT_NUMEREDDOF_COL_BY_ENT_FOR_LOOP_ for loops)

Definition at line 396 of file ProblemsMultiIndices.hpp.

  { return numeredDofsCols->get<Ent_mi_tag>().lower_bound(ent); }

getNumeredDofsColsByEntEnd()

NumeredDofEntityByEnt::iterator MoFEM::Problem::getNumeredDofsColsByEntEnd

(

const EntityHandle

ent

)

const

get end iterator for numeredDofsCols (insted you can use _IT_NUMEREDDOF_COL_BY_ENT_FOR_LOOP_ for loops)

Definition at line 400 of file ProblemsMultiIndices.hpp.

  { return numeredDofsCols->get<Ent_mi_tag>().upper_bound(ent); }

getNumeredDofsColsByLocIdxBegin()

NumeredDofEntityByLocalIdx::iterator MoFEM::Problem::getNumeredDofsColsByLocIdxBegin

(

const DofIdx

locidx

)

const

get begin iterator for numeredDofsCols (insted you can use _IT_NUMEREDDOF_COL_FOR_LOOP_ for loops)

Definition at line 350 of file ProblemsMultiIndices.hpp.

  { return numeredDofsCols->get<PetscLocalIdx_mi_tag>().lower_bound(locidx); }

getNumeredDofsColsByLocIdxEnd()

NumeredDofEntityByLocalIdx::iterator MoFEM::Problem::getNumeredDofsColsByLocIdxEnd

(

const DofIdx

locidx

)

const

get end iterator for numeredDofsCols (insted you can use _IT_NUMEREDDOF_COL_FOR_LOOP_ for loops)

Definition at line 354 of file ProblemsMultiIndices.hpp.

  { return numeredDofsCols->get<PetscLocalIdx_mi_tag>().upper_bound(locidx); }

getNumeredDofsColsEnd() [1/4]

NumeredDofEntity_multiIndex::iterator MoFEM::Problem::getNumeredDofsColsEnd

(

)

const

get end iterator for numeredDofsCols (insted you can use #_IT_NUMEREDDOFMOFEMENTITY_COL_FOR_LOOP_ for loops)

Definition at line 310 of file ProblemsMultiIndices.hpp.

{ return numeredDofsCols->end(); }

getNumeredDofsColsEnd() [2/4]

NumeredDofEntityByFieldName::iterator MoFEM::Problem::getNumeredDofsColsEnd

(

const std::string &

name

)

const

get end iterator for numeredDofsCols (insted you can use _IT_NUMEREDDOF_COL_BY_NAME_FOR_LOOP_ for loops)

Definition at line 446 of file ProblemsMultiIndices.hpp.

  { return numeredDofsCols->get<FieldName_mi_tag>().upper_bound(name); }

getNumeredDofsColsEnd() [3/4]

NumeredDofEntityByNameEntAndPart::iterator MoFEM::Problem::getNumeredDofsColsEnd	(	const std::string &	name,
		const EntityHandle	ent,
		const int	part
	)		const

get end iterator for numeredDofsCols (insted you can use _IT_NUMEREDDOF_COL_BY_NAME_ENT_PART_FOR_LOOP_ for loops)

Definition at line 495 of file ProblemsMultiIndices.hpp.

                                                                                                                                    {
    return numeredDofsCols->get<Composite_Name_Ent_And_Part_mi_tag>().upper_bound(boost::make_tuple(name,ent,part));
  }

getNumeredDofsColsEnd() [4/4]

NumeredDofEntity_multiIndex::iterator MoFEM::Problem::getNumeredDofsColsEnd

(

const int

part

)

const

get end iterator for numeredDofsRows (insted you can use _IT_NUMEREDDOF_COL_BY_PART_FOR_LOOP_ for loops)

Definition at line 558 of file ProblemsMultiIndices.hpp.

                                                                                  {
    return numeredDofsRows->get<Unique_mi_tag>().upper_bound(
      DofEntity::getGlobalUniqueIdCalculate_Hi_Proc(part)
    );
  }

getNumeredDofsRows()

const boost::shared_ptr<NumeredDofEntity_multiIndex>& MoFEM::Problem::getNumeredDofsRows

(

)

const

get access to numeredDofsRows storing DOFs on rows

Definition at line 108 of file ProblemsMultiIndices.hpp.

                                                                                 {
    return numeredDofsRows;
  }

getNumeredDofsRowsBegin() [1/4]

NumeredDofEntity_multiIndex::iterator MoFEM::Problem::getNumeredDofsRowsBegin

(

)

const

get begin iterator for numeredDofsRows (insted you can use #_IT_NUMEREDDOFMOFEMENTITY_ROW_FOR_LOOP_ for loops)

Definition at line 301 of file ProblemsMultiIndices.hpp.

{ return numeredDofsRows->begin(); }

getNumeredDofsRowsBegin() [2/4]

NumeredDofEntityByFieldName::iterator MoFEM::Problem::getNumeredDofsRowsBegin

(

const std::string &

name

)

const

get begin iterator for numeredDofsRows (insted you can use _IT_NUMEREDDOF_ROW_BY_NAME_FOR_LOOP_ for loops)

Definition at line 434 of file ProblemsMultiIndices.hpp.

  { return numeredDofsRows->get<FieldName_mi_tag>().lower_bound(name); }

getNumeredDofsRowsBegin() [3/4]

NumeredDofEntityByNameEntAndPart::iterator MoFEM::Problem::getNumeredDofsRowsBegin	(	const std::string &	name,
		const EntityHandle	ent,
		const int	part
	)		const

get begin iterator for numeredDofsRows (insted you can use _IT_NUMEREDDOF_ROW_BY_NAME_ENT_PART_FOR_LOOP_ for loops)

Definition at line 480 of file ProblemsMultiIndices.hpp.

                                                                                                                                      {
    return numeredDofsRows->get<Composite_Name_Ent_And_Part_mi_tag>().lower_bound(boost::make_tuple(name,ent,part));
  }

getNumeredDofsRowsBegin() [4/4]

NumeredDofEntity_multiIndex::iterator MoFEM::Problem::getNumeredDofsRowsBegin

(

const int

part

)

const

get begin iterator for numeredDofsRows (insted you can use _IT_NUMEREDDOF_ROW_BY_OWNPROC_FOR_LOOP_ for loops)

Definition at line 518 of file ProblemsMultiIndices.hpp.

                                                                                    {
    return numeredDofsRows->get<Unique_mi_tag>().lower_bound(
      DofEntity::getGlobalUniqueIdCalculate_Low_Proc(part)
    );
  }

getNumeredDofsRowsByEntBegin()

NumeredDofEntityByEnt::iterator MoFEM::Problem::getNumeredDofsRowsByEntBegin

(

const EntityHandle

ent

)

const

get begin iterator for numeredDofsRows (insted you can use _IT_NUMEREDDOF_ROW_BY_ENT_FOR_LOOP_ for loops)

Definition at line 388 of file ProblemsMultiIndices.hpp.

  { return numeredDofsRows->get<Ent_mi_tag>().lower_bound(ent); }

getNumeredDofsRowsByEntEnd()

NumeredDofEntityByEnt::iterator MoFEM::Problem::getNumeredDofsRowsByEntEnd

(

const EntityHandle

ent

)

const

get end iterator for numeredDofsRows (insted you can use _IT_NUMEREDDOF_ROW_BY_ENT_FOR_LOOP_ for loops)

Definition at line 392 of file ProblemsMultiIndices.hpp.

  { return numeredDofsRows->get<Ent_mi_tag>().upper_bound(ent); }

getNumeredDofsRowsByLocIdxBegin()

NumeredDofEntityByLocalIdx::iterator MoFEM::Problem::getNumeredDofsRowsByLocIdxBegin

(

const DofIdx

locidx

)

const

get begin iterator for numeredDofsRows (insted you can use _IT_NUMEREDDOF_ROW_FOR_LOOP_ for loops)

Definition at line 342 of file ProblemsMultiIndices.hpp.

  { return numeredDofsRows->get<PetscLocalIdx_mi_tag>().lower_bound(locidx); }

getNumeredDofsRowsByLocIdxEnd()

NumeredDofEntityByLocalIdx::iterator MoFEM::Problem::getNumeredDofsRowsByLocIdxEnd

(

const DofIdx

locidx

)

const

get end iterator for numeredDofsRows (insted you can use _IT_NUMEREDDOF_ROW_FOR_LOOP_ for loops)

Definition at line 346 of file ProblemsMultiIndices.hpp.

  { return numeredDofsRows->get<PetscLocalIdx_mi_tag>().upper_bound(locidx); }

getNumeredDofsRowsEnd() [1/4]

NumeredDofEntity_multiIndex::iterator MoFEM::Problem::getNumeredDofsRowsEnd

(

)

const

get end iterator for numeredDofsRows (insted you can use #_IT_NUMEREDDOFMOFEMENTITY_ROW_FOR_LOOP_ for loops)

Definition at line 304 of file ProblemsMultiIndices.hpp.

{ return numeredDofsRows->end(); }

getNumeredDofsRowsEnd() [2/4]

NumeredDofEntityByFieldName::iterator MoFEM::Problem::getNumeredDofsRowsEnd

(

const std::string &

name

)

const

get end iterator for numeredDofsRows (insted you can use _IT_NUMEREDDOF_ROW_BY_NAME_FOR_LOOP_ for loops)

Definition at line 438 of file ProblemsMultiIndices.hpp.

  { return numeredDofsRows->get<FieldName_mi_tag>().upper_bound(name); }

getNumeredDofsRowsEnd() [3/4]

NumeredDofEntityByNameEntAndPart::iterator MoFEM::Problem::getNumeredDofsRowsEnd	(	const std::string &	name,
		const EntityHandle	ent,
		const int	part
	)		const

get end iterator for numeredDofsRows (insted you can use _IT_NUMEREDDOF_ROW_BY_NAME_ENT_PART_FOR_LOOP_ for loops)

Definition at line 485 of file ProblemsMultiIndices.hpp.

                                                                                                                                    {
    return numeredDofsRows->get<Composite_Name_Ent_And_Part_mi_tag>().upper_bound(boost::make_tuple(name,ent,part));
  }

getNumeredDofsRowsEnd() [4/4]

NumeredDofEntity_multiIndex::iterator MoFEM::Problem::getNumeredDofsRowsEnd

(

const int

part

)

const

get end iterator for numeredDofsRows (insted you can use _IT_NUMEREDDOF_ROW_BY_OWNPROC_FOR_LOOP_ for loops)

Definition at line 525 of file ProblemsMultiIndices.hpp.

                                                                                  {
    return numeredDofsRows->get<Unique_mi_tag>().upper_bound(
      DofEntity::getGlobalUniqueIdCalculate_Hi_Proc(part)
    );
  }

getNumeredFEsBegin()

NumeredEntFiniteElementbyName::iterator MoFEM::Problem::getNumeredFEsBegin

(

std::string

fe_name

)

const

Definition at line 262 of file ProblemsMultiIndices.hpp.

                                                                                    {
    return numeredFiniteElements.get<FiniteElement_name_mi_tag>().lower_bound(fe_name);
  }

getNumeredFEsEnd()

NumeredEntFiniteElementbyName::iterator MoFEM::Problem::getNumeredFEsEnd

(

std::string

fe_name

)

const

Definition at line 266 of file ProblemsMultiIndices.hpp.

                                                                                  {
    return numeredFiniteElements.get<FiniteElement_name_mi_tag>().upper_bound(fe_name);
  }

getNumeredFiniteElements()

const NumeredEntFiniteElement_multiIndex& MoFEM::Problem::getNumeredFiniteElements

(

)

const

get access to reference for multi-index storing finite elements

Definition at line 122 of file ProblemsMultiIndices.hpp.

                                                                             {
    return numeredFiniteElements;
  }

getRowDofsByPetscGlobalDofIdx()

PetscErrorCode MoFEM::Problem::getRowDofsByPetscGlobalDofIdx	(	DofIdx	idx,
		const NumeredDofEntity **	dof_ptr
	)		const

Definition at line 77 of file ProblemsMultiIndices.cpp.

                                                                                                       {
  PetscFunctionBegin;
  NumeredDofEntity_multiIndex::index<PetscGlobalIdx_mi_tag>::type::iterator dit;
  dit = numeredDofsRows->get<PetscGlobalIdx_mi_tag>().find(idx);
  if(dit==numeredDofsRows->get<PetscGlobalIdx_mi_tag>().end()) {
    SETERRQ1(PETSC_COMM_SELF,MOFEM_NOT_FOUND,"row dof <%d> not found",idx);
  }
  *dof_ptr = &*(*dit);
  PetscFunctionReturn(0);
}

getRowDofsSeqence()

boost::shared_ptr<SequenceDofContainer> MoFEM::Problem::getRowDofsSeqence

(

)

const

Get reference to sequence data numbered dof container.

In sequence data container data are physically stored. The purpose of this is to allocate NumeredDofEntity data in bulk, having only one allocation instead each time entity is inserted. That makes code efficient.

The vector in sequence is destroyed if last entity inside that vector is destroyed. All MoFEM::NumeredDofEntity have aliased shared_ptr which points to the vector.

Returns

MoFEM::Problem::SequenceDofContainer

Definition at line 655 of file ProblemsMultiIndices.hpp.

                                                                         {
    return sequenceRowDofContainer;
  }

getSubData()

boost::shared_ptr<SubProblemData> MoFEM::Problem::getSubData

(

)

const

Get main problem of sub-problem is.

Returns

sub problem data structure

Examples:

cell_forces.cpp.

Definition at line 211 of file ProblemsMultiIndices.hpp.

                                                            {
    return subProblemData;
  }

Friends And Related Function Documentation

operator<<

std::ostream& operator<< ( std::ostream &  os, const Problem &  e  )

friend

Definition at line 66 of file ProblemsMultiIndices.cpp.

                                                        {
  os << "problem id " << e.getId()
    << " FiniteElement id " << e.getBitFEId()
    << " name "<<e.getName();
  return os;
}

Member Data Documentation

composedProblemsData

boost::shared_ptr<ComposedProblemsData> MoFEM::Problem::composedProblemsData

mutable

Pointer to data structure from which this problem is composed

Definition at line 218 of file ProblemsMultiIndices.hpp.

meshset

EntityHandle MoFEM::Problem::meshset

Problem meshset (on tag of this meshset all data related to problem are stored)

Definition at line 86 of file ProblemsMultiIndices.hpp.

nbDofsCol

DofIdx MoFEM::Problem::nbDofsCol

mutable

Global number of DOFs in col.

Definition at line 95 of file ProblemsMultiIndices.hpp.

nbDofsRow

DofIdx MoFEM::Problem::nbDofsRow

mutable

Global number of DOFs in row.

Definition at line 94 of file ProblemsMultiIndices.hpp.

nbGhostDofsCol

DofIdx MoFEM::Problem::nbGhostDofsCol

mutable

Number of ghost DOFs in col.

Definition at line 99 of file ProblemsMultiIndices.hpp.

nbGhostDofsRow

DofIdx MoFEM::Problem::nbGhostDofsRow

mutable

Number of ghost DOFs in row.

Definition at line 98 of file ProblemsMultiIndices.hpp.

nbLocDofsCol

DofIdx MoFEM::Problem::nbLocDofsCol

mutable

Local number of DOFs in colIs.

Definition at line 97 of file ProblemsMultiIndices.hpp.

nbLocDofsRow

DofIdx MoFEM::Problem::nbLocDofsRow

mutable

Local number of DOFs in row.

Definition at line 96 of file ProblemsMultiIndices.hpp.

numeredDofsCols

boost::shared_ptr<NumeredDofEntity_multiIndex> MoFEM::Problem::numeredDofsCols

mutable

store DOFs on columns for this problem

Definition at line 102 of file ProblemsMultiIndices.hpp.

numeredDofsRows

boost::shared_ptr<NumeredDofEntity_multiIndex> MoFEM::Problem::numeredDofsRows

mutable

store DOFs on rows for this problem

Definition at line 101 of file ProblemsMultiIndices.hpp.

numeredFiniteElements

NumeredEntFiniteElement_multiIndex MoFEM::Problem::numeredFiniteElements

mutable

store finite elements

Definition at line 103 of file ProblemsMultiIndices.hpp.

sequenceColDofContainer

boost::shared_ptr<SequenceDofContainer> MoFEM::Problem::sequenceColDofContainer

mutableprivate

Definition at line 679 of file ProblemsMultiIndices.hpp.

sequenceRowDofContainer

boost::shared_ptr<SequenceDofContainer> MoFEM::Problem::sequenceRowDofContainer

mutableprivate

Definition at line 678 of file ProblemsMultiIndices.hpp.

subProblemData

boost::shared_ptr<SubProblemData> MoFEM::Problem::subProblemData

mutable

Pointer to data structure. This pointer has allocated data only for sub problems.

Definition at line 205 of file ProblemsMultiIndices.hpp.

tagBitFEId

BitFEId* MoFEM::Problem::tagBitFEId

IDs of finite elements in problem.

Definition at line 90 of file ProblemsMultiIndices.hpp.

tagBitRefLevel

BitRefLevel* MoFEM::Problem::tagBitRefLevel

BitRef level of finite elements in problem.

Definition at line 91 of file ProblemsMultiIndices.hpp.

tagId

BitProblemId* MoFEM::Problem::tagId

Unique problem ID.

Definition at line 87 of file ProblemsMultiIndices.hpp.

tagMaskBitRefLevel

BitRefLevel* MoFEM::Problem::tagMaskBitRefLevel

BItRefMask of elements in problem.

Definition at line 92 of file ProblemsMultiIndices.hpp.

tagName

const char* MoFEM::Problem::tagName

Problem name.

Definition at line 88 of file ProblemsMultiIndices.hpp.

tagNameSize

int MoFEM::Problem::tagNameSize

Size of problem name.

Definition at line 89 of file ProblemsMultiIndices.hpp.

---

The documentation for this struct was generated from the following files:

• src/multi_indices/ProblemsMultiIndices.hpp
• src/multi_indices/impl/ProblemsMultiIndices.cpp