v0.13.1
Public Member Functions | Public Attributes | List of all members
PrismOp Struct Reference
Inheritance diagram for PrismOp:
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Collaboration diagram for PrismOp:
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Public Member Functions

 PrismOp (moab::Interface &post_proc, MapCoords &map_coords)
 
MoFEMErrorCode doWork (int side, EntityType type, EntitiesFieldData::EntData &data)
 Operator for linear form, usually to calculate values on right hand side. More...
 
- Public Member Functions inherited from MoFEM::FatPrismElementForcesAndSourcesCore::UserDataOperator
double getArea (const int dd)
 get face aRea More...
 
double getAreaF3 ()
 
double getAreaF4 ()
 
VectorDoublegetNormal ()
 get triangle normal More...
 
VectorAdaptor getNormalF3 ()
 
VectorAdaptor getNormalF4 ()
 
MatrixDoublegetGaussPts ()
 get Gauss pts. in the prism More...
 
MatrixDoublegetGaussPtsTrianglesOnly ()
 get Gauss pts. on triangles More...
 
MatrixDoublegetGaussPtsThroughThickness ()
 get Gauss pts. through thickness More...
 
MatrixDoublegetCoordsAtGaussPts ()
 get coordinates at Gauss pts. More...
 
MatrixDoublegetCoordsAtGaussPtsTrianglesOnly ()
 get coordinates at Gauss pts. More...
 
MatrixDoublegetHOCoordsAtGaussPtsF3 ()
 coordinate at Gauss points on face 3 (if hierarchical approximation of element geometry) More...
 
MatrixDoublegetHOCoordsAtGaussPtsF4 ()
 coordinate at Gauss points on face 4 (if hierarchical approximation of element geometry) More...
 
MatrixDoublegetNormalsAtGaussPtsF3 ()
 if higher order geometry return normals at face F3 at Gauss pts. More...
 
MatrixDoublegetNormalsAtGaussPtsF4 ()
 if higher order geometry return normals at face F4 at Gauss pts. More...
 
ublas::matrix_row< MatrixDoublegetNormalsAtGaussPtsF3 (const int gg)
 if higher order geometry return normals at Gauss pts. More...
 
ublas::matrix_row< MatrixDoublegetNormalsAtGaussPtsF4 (const int gg)
 if higher order geometry return normals at Gauss pts. More...
 
MatrixDoublegetTangent1AtGaussPtF3 ()
 if higher order geometry return tangent vector to triangle at Gauss pts. More...
 
MatrixDoublegetTangent2AtGaussPtF3 ()
 if higher order geometry return tangent vector to triangle at Gauss pts. More...
 
MatrixDoublegetTangent1AtGaussPtF4 ()
 if higher order geometry return tangent vector to triangle at Gauss pts. More...
 
MatrixDoublegetTangent2AtGaussPtF4 ()
 if higher order geometry return tangent vector to triangle at Gauss pts. More...
 
EntitiesFieldDatagetTrianglesOnlyDataStructure ()
 
EntitiesFieldDatagetTroughThicknessDataStructure ()
 
const FatPrismElementForcesAndSourcesCoregetPrismFE ()
 return pointer to fat prism finite element More...
 
- Public Member Functions inherited from MoFEM::VolumeElementForcesAndSourcesCore::UserDataOperator
int getNumNodes ()
 get element number of nodes More...
 
const EntityHandle * getConn ()
 get element connectivity More...
 
double getVolume () const
 element volume (linear geometry) More...
 
doublegetVolume ()
 element volume (linear geometry) More...
 
FTensor::Tensor2< double *, 3, 3 > & getJac ()
 get element Jacobian More...
 
FTensor::Tensor2< double *, 3, 3 > & getInvJac ()
 get element inverse Jacobian More...
 
VectorDoublegetCoords ()
 nodal coordinates More...
 
VolumeElementForcesAndSourcesCoregetVolumeFE () const
 return pointer to Generic Volume Finite Element object More...
 
- Public Member Functions inherited from MoFEM::ForcesAndSourcesCore::UserDataOperator
 UserDataOperator (const FieldSpace space, const char type=OPSPACE, const bool symm=true)
 
 UserDataOperator (const std::string &field_name, const char type, const bool symm=true)
 
 UserDataOperator (const std::string &row_field_name, const std::string &col_field_name, const char type, const bool symm=true)
 
boost::shared_ptr< const NumeredEntFiniteElementgetNumeredEntFiniteElementPtr () const
 Return raw pointer to NumeredEntFiniteElement. More...
 
EntityHandle getFEEntityHandle () const
 Return finite element entity handle. More...
 
int getFEDim () const
 Get dimension of finite element. More...
 
EntityType getFEType () const
 Get dimension of finite element. More...
 
boost::weak_ptr< SideNumbergetSideNumberPtr (const int side_number, const EntityType type)
 Get the side number pointer. More...
 
EntityHandle getSideEntity (const int side_number, const EntityType type)
 Get the side entity. More...
 
int getNumberOfNodesOnElement () const
 Get the number of nodes on finite element. More...
 
MoFEMErrorCode getProblemRowIndices (const std::string filed_name, const EntityType type, const int side, VectorInt &indices) const
 Get row indices. More...
 
MoFEMErrorCode getProblemColIndices (const std::string filed_name, const EntityType type, const int side, VectorInt &indices) const
 Get col indices. More...
 
const FEMethodgetFEMethod () const
 Return raw pointer to Finite Element Method object. More...
 
int getOpType () const
 Get operator types. More...
 
void setOpType (const OpType type)
 Set operator type. More...
 
void addOpType (const OpType type)
 Add operator type. More...
 
int getNinTheLoop () const
 get number of finite element in the loop More...
 
int getLoopSize () const
 get size of elements in the loop More...
 
std::string getFEName () const
 Get name of the element. More...
 
ForcesAndSourcesCoregetPtrFE () const
 
ForcesAndSourcesCoregetSidePtrFE () const
 
ForcesAndSourcesCoregetRefinePtrFE () const
 
const PetscData::SwitchesgetDataCtx () const
 
const KspMethod::KSPContext getKSPCtx () const
 
const SnesMethod::SNESContext getSNESCtx () const
 
const TSMethod::TSContext getTSCtx () const
 
Vec getKSPf () const
 
Mat getKSPA () const
 
Mat getKSPB () const
 
Vec getSNESf () const
 
Vec getSNESx () const
 
Mat getSNESA () const
 
Mat getSNESB () const
 
Vec getTSu () const
 
Vec getTSu_t () const
 
Vec getTSu_tt () const
 
Vec getTSf () const
 
Mat getTSA () const
 
Mat getTSB () const
 
int getTSstep () const
 
double getTStime () const
 
double getTSa () const
 
double getTSaa () const
 
MatrixDoublegetGaussPts ()
 matrix of integration (Gauss) points for Volume Element More...
 
auto getFTensor0IntegrationWeight ()
 Get integration weights. More...
 
MatrixDoublegetCoordsAtGaussPts ()
 Gauss points and weight, matrix (nb. of points x 3) More...
 
auto getFTensor1CoordsAtGaussPts ()
 Get coordinates at integration points assuming linear geometry. More...
 
double getMeasure () const
 get measure of element More...
 
doublegetMeasure ()
 get measure of element More...
 
MoFEMErrorCode loopSide (const string &fe_name, ForcesAndSourcesCore *side_fe, const size_t dim, const EntityHandle ent_for_side=0, const int verb=QUIET, const LogManager::SeverityLevel sev=Sev::noisy)
 User call this function to loop over elements on the side of face. This function calls finite element with is operator to do calculations. More...
 
MoFEMErrorCode loopThis (const string &fe_name, ForcesAndSourcesCore *parent_fe, const int verb=QUIET, const LogManager::SeverityLevel sev=Sev::noisy)
 User call this function to loop over parent elements. This function calls finite element with is operator to do calculations. More...
 
MoFEMErrorCode loopParent (const string &fe_name, ForcesAndSourcesCore *parent_fe, const int verb=QUIET, const LogManager::SeverityLevel sev=Sev::noisy)
 User call this function to loop over parent elements. This function calls finite element with is operator to do calculations. More...
 
MoFEMErrorCode loopChildren (const string &fe_name, ForcesAndSourcesCore *child_fe, const int verb=QUIET, const LogManager::SeverityLevel sev=Sev::noisy)
 User call this function to loop over parent elements. This function calls finite element with is operator to do calculations. More...
 
- Public Member Functions inherited from MoFEM::DataOperator
 DataOperator (const bool symm=true)
 
virtual ~DataOperator ()=default
 
virtual MoFEMErrorCode doWork (int row_side, int col_side, EntityType row_type, EntityType col_type, EntitiesFieldData::EntData &row_data, EntitiesFieldData::EntData &col_data)
 Operator for bi-linear form, usually to calculate values on left hand side. More...
 
virtual MoFEMErrorCode opLhs (EntitiesFieldData &row_data, EntitiesFieldData &col_data)
 
virtual MoFEMErrorCode doWork (int side, EntityType type, EntitiesFieldData::EntData &data)
 Operator for linear form, usually to calculate values on right hand side. More...
 
virtual MoFEMErrorCode opRhs (EntitiesFieldData &data, const bool error_if_no_base=false)
 
bool getSymm () const
 Get if operator uses symmetry of DOFs or not. More...
 
void setSymm ()
 set if operator is executed taking in account symmetry More...
 
void unSetSymm ()
 unset if operator is executed for non symmetric problem More...
 

Public Attributes

moab::Interface & postProc
 
MapCoordsmapCoords
 
std::vector< EntityHandle > nodeHandles
 
- Public Attributes inherited from MoFEM::ForcesAndSourcesCore::UserDataOperator
char opType
 
std::string rowFieldName
 
std::string colFieldName
 
FieldSpace sPace
 
- Public Attributes inherited from MoFEM::DataOperator
DoWorkLhsHookFunType doWorkLhsHook
 
DoWorkRhsHookFunType doWorkRhsHook
 
bool sYmm
 If true assume that matrix is symmetric structure. More...
 
std::array< bool, MBMAXTYPE > doEntities
 If true operator is executed for entity. More...
 
booldoVertices
 \deprectaed If false skip vertices More...
 
booldoEdges
 \deprectaed If false skip edges More...
 
booldoQuads
 \deprectaed More...
 
booldoTris
 \deprectaed More...
 
booldoTets
 \deprectaed More...
 
booldoPrisms
 \deprectaed More...
 

Additional Inherited Members

- Public Types inherited from MoFEM::ForcesAndSourcesCore::UserDataOperator
enum  OpType {
  OPROW = 1 << 0 , OPCOL = 1 << 1 , OPROWCOL = 1 << 2 , OPSPACE = 1 << 3 ,
  OPLAST = 1 << 3
}
 Controls loop over entities on element. More...
 
- Public Types inherited from MoFEM::DataOperator
using DoWorkLhsHookFunType = boost::function< MoFEMErrorCode(DataOperator *op_ptr, int row_side, int col_side, EntityType row_type, EntityType col_type, EntitiesFieldData::EntData &row_data, EntitiesFieldData::EntData &col_data)>
 
using DoWorkRhsHookFunType = boost::function< MoFEMErrorCode(DataOperator *op_ptr, int side, EntityType type, EntitiesFieldData::EntData &data)>
 
- Static Public Attributes inherited from MoFEM::ForcesAndSourcesCore::UserDataOperator
static const char *const OpTypeNames []
 
- Protected Member Functions inherited from MoFEM::FatPrismElementForcesAndSourcesCore::UserDataOperator
MoFEMErrorCode setPtrFE (ForcesAndSourcesCore *ptr)
 
- Protected Member Functions inherited from MoFEM::VolumeElementForcesAndSourcesCore::UserDataOperator
MoFEMErrorCode setPtrFE (ForcesAndSourcesCore *ptr)
 
virtual MoFEMErrorCode setPtrFE (ForcesAndSourcesCore *ptr)
 
- Protected Attributes inherited from MoFEM::ForcesAndSourcesCore::UserDataOperator
ForcesAndSourcesCoreptrFE
 

Detailed Description

Examples
prism_elements_from_surface.cpp.

Definition at line 62 of file prism_elements_from_surface.cpp.

Constructor & Destructor Documentation

◆ PrismOp()

PrismOp::PrismOp ( moab::Interface &  post_proc,
MapCoords map_coords 
)
Examples
prism_elements_from_surface.cpp.

Definition at line 353 of file prism_elements_from_surface.cpp.

355 "FIELD1", "FIELD1", ForcesAndSourcesCore::UserDataOperator::OPROW),
356 postProc(post_proc), mapCoords(map_coords) {}
ForcesAndSourcesCore::UserDataOperator UserDataOperator
moab::Interface & postProc

Member Function Documentation

◆ doWork()

MoFEMErrorCode PrismOp::doWork ( int  side,
EntityType  type,
EntitiesFieldData::EntData data 
)
virtual

Operator for linear form, usually to calculate values on right hand side.

Reimplemented from MoFEM::DataOperator.

Examples
prism_elements_from_surface.cpp.

Definition at line 358 of file prism_elements_from_surface.cpp.

359 {
360 constexpr double def_val[] = {0, 0, 0};
362 switch (type) {
363 case MBVERTEX:
364 case MBEDGE:
365 case MBTRI:
366 case MBQUAD:
367 case MBPRISM:
368 break;
369 default:
371 }
372 if (type == MBTRI && (side != 3 && side != 4))
374 if (type == MBQUAD && (side == 3 || side == 4))
376
377 const int nb_dofs = data.getIndices().size();
378 for (int dd = 0; dd != nb_dofs; ++dd)
379 data.getFieldDofs()[dd]->getFieldData() = data.getIndices()[dd];
380
381 if (type == MBVERTEX) {
382 const size_t nb_gauss_pts = getGaussPts().size2();
383 auto &coords_at_pts = getGaussPts();
384 nodeHandles.reserve(nb_gauss_pts);
385 nodeHandles.clear();
386 for (size_t gg = 0; gg != nb_gauss_pts; ++gg) {
387 auto t = boost::make_tuple(CoordsAndHandle::getArg(coords_at_pts(0, gg)),
388 CoordsAndHandle::getArg(coords_at_pts(1, gg)),
389 CoordsAndHandle::getArg(coords_at_pts(2, gg)));
390
391 auto it = mapCoords.find(t);
392 if (it != mapCoords.end())
393 nodeHandles.emplace_back(it->node);
394 else
395 SETERRQ(PETSC_COMM_SELF, MOFEM_DATA_INCONSISTENCY, "Vertex not found");
396 }
397
398 MatrixDouble node_coords(nb_gauss_pts, 3);
399 CHKERR postProc.get_coords(&nodeHandles[0], nodeHandles.size(),
400 &node_coords(0, 0));
401 for (size_t gg = 0; gg != nb_gauss_pts; ++gg) {
402 constexpr double eps = 1e-12;
403 for (auto d : {0, 1, 2})
404 if (std::abs(node_coords(gg, d) - getGaussPts()(d, gg)) > eps) {
405 SETERRQ(PETSC_COMM_SELF, MOFEM_ATOM_TEST_INVALID,
406 "Inconsistency between node coords and integration "
407 "points");
408 }
409 for (auto d : {0, 1, 2})
410 if (std::abs(node_coords(gg, d) - getCoordsAtGaussPts()(gg, d)) > eps)
411 SETERRQ(PETSC_COMM_SELF, MOFEM_ATOM_TEST_INVALID,
412 "Inconsistency between node coords and integration "
413 "points");
414 }
415
416 Tag th;
417 CHKERR postProc.tag_get_handle("Coords", 3, MB_TYPE_DOUBLE, th,
418 MB_TAG_CREAT | MB_TAG_DENSE, def_val);
419 CHKERR postProc.tag_set_data(th, &nodeHandles[0], nodeHandles.size(),
420 &getCoordsAtGaussPts()(0, 0));
421 }
422
423 auto to_str = [](auto i) { return boost::lexical_cast<std::string>(i); };
424 std::string tag_name_base =
425 "PrismType" + to_str(type) + "Side" + to_str(side);
426 std::cout << tag_name_base << endl;
427
428 MatrixDouble trans_base = trans(data.getN());
429 if (trans_base.size2() != nodeHandles.size())
430 SETERRQ2(PETSC_COMM_SELF, MOFEM_ATOM_TEST_INVALID, "wrong size %d != %d",
431 trans_base.size2(), nodeHandles.size());
432 for (size_t rr = 0; rr != trans_base.size1(); ++rr) {
433 auto tag_name = tag_name_base + "Base" + to_str(rr);
434 Tag th;
435 CHKERR postProc.tag_get_handle(tag_name.c_str(), 1, MB_TYPE_DOUBLE, th,
436 MB_TAG_CREAT | MB_TAG_DENSE, def_val);
437 CHKERR postProc.tag_set_data(th, &nodeHandles[0], nodeHandles.size(),
438 &trans_base(rr, 0));
439 }
440
442}
static const double eps
#define MoFEMFunctionReturnHot(a)
Last executable line of each PETSc function used for error handling. Replaces return()
Definition: definitions.h:460
#define MoFEMFunctionBegin
First executable line of each MoFEM function, used for error handling. Final line of MoFEM functions ...
Definition: definitions.h:359
@ MOFEM_ATOM_TEST_INVALID
Definition: definitions.h:53
@ MOFEM_DATA_INCONSISTENCY
Definition: definitions.h:44
#define MoFEMFunctionReturn(a)
Last executable line of each PETSc function used for error handling. Replaces return()
Definition: definitions.h:429
#define CHKERR
Inline error check.
Definition: definitions.h:548
FTensor::Index< 'i', SPACE_DIM > i
const Tensor1_Expr< const dTensor0< T, Dim, i >, typename promote< T, double >::V, Dim, i > d(const Tensor0< T * > &a, const Index< i, Dim > index, const Tensor1< int, Dim > &d_ijk, const Tensor1< double, Dim > &d_xyz)
Definition: dTensor0.hpp:27
const Tensor2_symmetric_Expr< const ddTensor0< T, Dim, i, j >, typename promote< T, double >::V, Dim, i, j > dd(const Tensor0< T * > &a, const Index< i, Dim > index1, const Index< j, Dim > index2, const Tensor1< int, Dim > &d_ijk, const Tensor1< double, Dim > &d_xyz)
Definition: ddTensor0.hpp:33
UBlasMatrix< double > MatrixDouble
Definition: Types.hpp:88
constexpr double t
plate stiffness
Definition: plate.cpp:76
static double getArg(double x)
MatrixDouble & getN(const FieldApproximationBase base)
get base functions this return matrix (nb. of rows is equal to nb. of Gauss pts, nb....
const VectorDofs & getFieldDofs() const
get dofs data stature FEDofEntity
const VectorInt & getIndices() const
Get global indices of dofs on entity.
std::vector< EntityHandle > nodeHandles

Member Data Documentation

◆ mapCoords

MapCoords& PrismOp::mapCoords

◆ nodeHandles

std::vector<EntityHandle> PrismOp::nodeHandles

◆ postProc

moab::Interface& PrismOp::postProc

The documentation for this struct was generated from the following file: