bone_install

autotoc_md10

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name: python3

!mkdir -p ~/mofem-cephas_bone && \
git clone -b lukasz/develop https://bitbucket.org/mofem/mofem-cephas.git ~/mofem-cephas_bone && \
cd ~/mofem-cephas_bone/mofem/users_modules/ && \
    git clone -b lukasz/develop https://AdrianaKul@bitbucket.org/mofem/basic_finite_elements.git && \
    git clone -b lukasz/develop https://likask@bitbucket.org/likask/mofem_um_bone_remodelling.git 

!export SPACK_ROOT=/mofem_install/spack &&. /mofem_install/spack/share/spack/setup-env.sh && \
    spack env create mofem_bone && \
    spack env activate mofem_bone 

!export SPACK_ROOT=/mofem_install/spack && . /mofem_install/spack/share/spack/setup-env.sh && \
    spack env activate mofem_bone && \
    spack config add "packages:all:target:[x86_64]" && \
    spack config add "packages:all:variants:build_type=Release"  && \
    spack add mofem-cephas@0.15.0+adol-c+med+mgis~shared+slepc+tetgen install_id='bone' ^petsc+X  && \
    spack develop -p ~/mofem-cephas_bone mofem-cephas@0.15.0 && \
    spack concretize -f

!spack -e mofem_bone install -v

!spack -e mofem_bone view symlink -i ~/view_bone mofem-cephas