v0.14.0
Public Member Functions | Private Attributes | List of all members
OpCalculatePiolaIncompressibleNH< DIM_0, DIM_1 > Struct Template Reference
Inheritance diagram for OpCalculatePiolaIncompressibleNH< DIM_0, DIM_1 >:
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Collaboration diagram for OpCalculatePiolaIncompressibleNH< DIM_0, DIM_1 >:
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Public Member Functions

 OpCalculatePiolaIncompressibleNH (double shear_modulus, double bulk_modulus, double m_u, double lambda_lamme, boost::shared_ptr< MatrixDouble > first_piola_ptr, boost::shared_ptr< MatrixDouble > def_grad_ptr, boost::shared_ptr< MatrixDouble > inv_def_grad_ptr, boost::shared_ptr< VectorDouble > det)
 
MoFEMErrorCode doWork (int side, EntityType type, DataForcesAndSourcesCore::EntData &data)
 
- Public Member Functions inherited from MoFEM::ForcesAndSourcesCore::UserDataOperator
 UserDataOperator (const FieldSpace space, const char type=OPSPACE, const bool symm=true)
 
 UserDataOperator (const std::string field_name, const char type, const bool symm=true)
 
 UserDataOperator (const std::string row_field_name, const std::string col_field_name, const char type, const bool symm=true)
 
boost::shared_ptr< const NumeredEntFiniteElementgetNumeredEntFiniteElementPtr () const
 Return raw pointer to NumeredEntFiniteElement. More...
 
EntityHandle getFEEntityHandle () const
 Return finite element entity handle. More...
 
int getFEDim () const
 Get dimension of finite element. More...
 
EntityType getFEType () const
 Get dimension of finite element. More...
 
boost::weak_ptr< SideNumbergetSideNumberPtr (const int side_number, const EntityType type)
 Get the side number pointer. More...
 
EntityHandle getSideEntity (const int side_number, const EntityType type)
 Get the side entity. More...
 
int getNumberOfNodesOnElement () const
 Get the number of nodes on finite element. More...
 
MoFEMErrorCode getProblemRowIndices (const std::string filed_name, const EntityType type, const int side, VectorInt &indices) const
 Get row indices. More...
 
MoFEMErrorCode getProblemColIndices (const std::string filed_name, const EntityType type, const int side, VectorInt &indices) const
 Get col indices. More...
 
const FEMethodgetFEMethod () const
 Return raw pointer to Finite Element Method object. More...
 
int getOpType () const
 Get operator types. More...
 
void setOpType (const OpType type)
 Set operator type. More...
 
void addOpType (const OpType type)
 Add operator type. More...
 
int getNinTheLoop () const
 get number of finite element in the loop More...
 
int getLoopSize () const
 get size of elements in the loop More...
 
std::string getFEName () const
 Get name of the element. More...
 
ForcesAndSourcesCoregetPtrFE () const
 
ForcesAndSourcesCoregetSidePtrFE () const
 
ForcesAndSourcesCoregetRefinePtrFE () const
 
const PetscData::SwitchesgetDataCtx () const
 
const KspMethod::KSPContext getKSPCtx () const
 
const SnesMethod::SNESContext getSNESCtx () const
 
const TSMethod::TSContext getTSCtx () const
 
Vec getKSPf () const
 
Mat getKSPA () const
 
Mat getKSPB () const
 
Vec getSNESf () const
 
Vec getSNESx () const
 
Mat getSNESA () const
 
Mat getSNESB () const
 
Vec getTSu () const
 
Vec getTSu_t () const
 
Vec getTSu_tt () const
 
Vec getTSf () const
 
Mat getTSA () const
 
Mat getTSB () const
 
int getTSstep () const
 
double getTStime () const
 
double getTStimeStep () const
 
double getTSa () const
 
double getTSaa () const
 
MatrixDoublegetGaussPts ()
 matrix of integration (Gauss) points for Volume Element More...
 
auto getFTensor0IntegrationWeight ()
 Get integration weights. More...
 
MatrixDoublegetCoordsAtGaussPts ()
 Gauss points and weight, matrix (nb. of points x 3) More...
 
auto getFTensor1CoordsAtGaussPts ()
 Get coordinates at integration points assuming linear geometry. More...
 
double getMeasure () const
 get measure of element More...
 
doublegetMeasure ()
 get measure of element More...
 
MoFEMErrorCode loopSide (const string &fe_name, ForcesAndSourcesCore *side_fe, const size_t dim, const EntityHandle ent_for_side=0, const int verb=QUIET, const LogManager::SeverityLevel sev=Sev::noisy, AdjCache *adj_cache=nullptr)
 User calls this function to loop over elements on the side of face. This function calls finite element with its operator to do calculations. More...
 
MoFEMErrorCode loopThis (const string &fe_name, ForcesAndSourcesCore *this_fe, const int verb=QUIET, const LogManager::SeverityLevel sev=Sev::noisy)
 User calls this function to loop over the same element using a different set of integration points. This function calls finite element with its operator to do calculations. More...
 
MoFEMErrorCode loopParent (const string &fe_name, ForcesAndSourcesCore *parent_fe, const int verb=QUIET, const LogManager::SeverityLevel sev=Sev::noisy)
 User calls this function to loop over parent elements. This function calls finite element with its operator to do calculations. More...
 
MoFEMErrorCode loopChildren (const string &fe_name, ForcesAndSourcesCore *child_fe, const int verb=QUIET, const LogManager::SeverityLevel sev=Sev::noisy)
 User calls this function to loop over parent elements. This function calls finite element with its operator to do calculations. More...
 
- Public Member Functions inherited from MoFEM::DataOperator
 DataOperator (const bool symm=true)
 
virtual ~DataOperator ()=default
 
virtual MoFEMErrorCode doWork (int row_side, int col_side, EntityType row_type, EntityType col_type, EntitiesFieldData::EntData &row_data, EntitiesFieldData::EntData &col_data)
 Operator for bi-linear form, usually to calculate values on left hand side. More...
 
virtual MoFEMErrorCode opLhs (EntitiesFieldData &row_data, EntitiesFieldData &col_data)
 
virtual MoFEMErrorCode doWork (int side, EntityType type, EntitiesFieldData::EntData &data)
 Operator for linear form, usually to calculate values on right hand side. More...
 
virtual MoFEMErrorCode opRhs (EntitiesFieldData &data, const bool error_if_no_base=false)
 
bool getSymm () const
 Get if operator uses symmetry of DOFs or not. More...
 
void setSymm ()
 set if operator is executed taking in account symmetry More...
 
void unSetSymm ()
 unset if operator is executed for non symmetric problem More...
 

Private Attributes

double shearModulus
 
double bulkModulus
 
double mU
 
double lammeLambda
 
boost::shared_ptr< MatrixDouble > firstPiolaPtr
 
boost::shared_ptr< MatrixDouble > defGradPtr
 
boost::shared_ptr< MatrixDouble > invDefGradPtr
 
boost::shared_ptr< VectorDouble > dEt
 

Additional Inherited Members

- Public Types inherited from MoFEM::ForcesAndSourcesCore::UserDataOperator
enum  OpType {
  OPROW = 1 << 0, OPCOL = 1 << 1, OPROWCOL = 1 << 2, OPSPACE = 1 << 3,
  OPLAST = 1 << 3
}
 Controls loop over entities on element. More...
 
using AdjCache = std::map< EntityHandle, std::vector< boost::weak_ptr< NumeredEntFiniteElement > >>
 
- Public Types inherited from MoFEM::DataOperator
using DoWorkLhsHookFunType = boost::function< MoFEMErrorCode(DataOperator *op_ptr, int row_side, int col_side, EntityType row_type, EntityType col_type, EntitiesFieldData::EntData &row_data, EntitiesFieldData::EntData &col_data)>
 
using DoWorkRhsHookFunType = boost::function< MoFEMErrorCode(DataOperator *op_ptr, int side, EntityType type, EntitiesFieldData::EntData &data)>
 
- Public Attributes inherited from MoFEM::ForcesAndSourcesCore::UserDataOperator
char opType
 
std::string rowFieldName
 
std::string colFieldName
 
FieldSpace sPace
 
- Public Attributes inherited from MoFEM::DataOperator
DoWorkLhsHookFunType doWorkLhsHook
 
DoWorkRhsHookFunType doWorkRhsHook
 
bool sYmm
 If true assume that matrix is symmetric structure. More...
 
std::array< bool, MBMAXTYPE > doEntities
 If true operator is executed for entity. More...
 
booldoVertices
 \deprectaed If false skip vertices More...
 
booldoEdges
 \deprectaed If false skip edges More...
 
booldoQuads
 \deprectaed More...
 
booldoTris
 \deprectaed More...
 
booldoTets
 \deprectaed More...
 
booldoPrisms
 \deprectaed More...
 
- Static Public Attributes inherited from MoFEM::ForcesAndSourcesCore::UserDataOperator
static const char *const OpTypeNames []
 
- Protected Member Functions inherited from MoFEM::ForcesAndSourcesCore::UserDataOperator
virtual MoFEMErrorCode setPtrFE (ForcesAndSourcesCore *ptr)
 
- Protected Attributes inherited from MoFEM::ForcesAndSourcesCore::UserDataOperator
ForcesAndSourcesCoreptrFE
 

Detailed Description

template<int DIM_0, int DIM_1>
struct OpCalculatePiolaIncompressibleNH< DIM_0, DIM_1 >

Examples
dynamic_first_order_con_law.cpp.

Definition at line 267 of file dynamic_first_order_con_law.cpp.

Constructor & Destructor Documentation

◆ OpCalculatePiolaIncompressibleNH()

template<int DIM_0, int DIM_1>
OpCalculatePiolaIncompressibleNH< DIM_0, DIM_1 >::OpCalculatePiolaIncompressibleNH ( double  shear_modulus,
double  bulk_modulus,
double  m_u,
double  lambda_lamme,
boost::shared_ptr< MatrixDouble >  first_piola_ptr,
boost::shared_ptr< MatrixDouble >  def_grad_ptr,
boost::shared_ptr< MatrixDouble >  inv_def_grad_ptr,
boost::shared_ptr< VectorDouble >  det 
)
inline

Definition at line 269 of file dynamic_first_order_con_law.cpp.

276  shearModulus(shear_modulus), bulkModulus(bulk_modulus), mU(m_u),
277  lammeLambda(lambda_lamme), firstPiolaPtr(first_piola_ptr),
278  defGradPtr(def_grad_ptr), invDefGradPtr(inv_def_grad_ptr), dEt(det) {}

Member Function Documentation

◆ doWork()

template<int DIM_0, int DIM_1>
MoFEMErrorCode OpCalculatePiolaIncompressibleNH< DIM_0, DIM_1 >::doWork ( int  side,
EntityType  type,
DataForcesAndSourcesCore::EntData data 
)
inline

Definition at line 280 of file dynamic_first_order_con_law.cpp.

281  {
283  // Define Indicies
288 
289  // Define Kronecker Delta
290  constexpr auto t_kd = FTensor::Kronecker_Delta<double>();
291 
292  // Number of Gauss points
293  const size_t nb_gauss_pts = getGaussPts().size2();
294 
295  // Resize Piola
296  firstPiolaPtr->resize(DIM_0 * DIM_1, nb_gauss_pts, false); // ignatios check
297  firstPiolaPtr->clear();
298 
299  // Extract matrix from data matrix
300  auto t_P = getFTensor2FromMat<SPACE_DIM, SPACE_DIM>(*firstPiolaPtr);
301  auto t_F = getFTensor2FromMat<SPACE_DIM, SPACE_DIM>(*defGradPtr);
302  auto t_inv_F = getFTensor2FromMat<SPACE_DIM, SPACE_DIM>(*invDefGradPtr);
303  auto t_det = getFTensor0FromVec<1>(*dEt);
304  const double two_o_three = 2. / 3.;
305  const double one_o_three = 1. / 3.;
306  const double bulk_mod = bulkModulus;
307  const double shear_mod = shearModulus;
308  for (auto gg = 0; gg != nb_gauss_pts; ++gg) {
309 
310  // Nearly incompressible NH
311  // volumetric part
312  t_P(i, j) = bulk_mod * (t_det - 1.) * t_det * t_inv_F(j, i);
313  // deviatoric part
314  t_P(i, j) +=
315  shear_mod * pow(t_det, two_o_three) *
316  (t_F(i, j) - one_o_three * (t_F(l, k) * t_F(l, k)) * t_inv_F(j, i));
317 
318  ++t_F;
319  ++t_P;
320  ++t_inv_F;
321  ++t_det;
322  }
323 
325  }

Member Data Documentation

◆ bulkModulus

template<int DIM_0, int DIM_1>
double OpCalculatePiolaIncompressibleNH< DIM_0, DIM_1 >::bulkModulus
private

Definition at line 329 of file dynamic_first_order_con_law.cpp.

◆ defGradPtr

template<int DIM_0, int DIM_1>
boost::shared_ptr<MatrixDouble> OpCalculatePiolaIncompressibleNH< DIM_0, DIM_1 >::defGradPtr
private

Definition at line 333 of file dynamic_first_order_con_law.cpp.

◆ dEt

template<int DIM_0, int DIM_1>
boost::shared_ptr<VectorDouble> OpCalculatePiolaIncompressibleNH< DIM_0, DIM_1 >::dEt
private

Definition at line 335 of file dynamic_first_order_con_law.cpp.

◆ firstPiolaPtr

template<int DIM_0, int DIM_1>
boost::shared_ptr<MatrixDouble> OpCalculatePiolaIncompressibleNH< DIM_0, DIM_1 >::firstPiolaPtr
private

Definition at line 332 of file dynamic_first_order_con_law.cpp.

◆ invDefGradPtr

template<int DIM_0, int DIM_1>
boost::shared_ptr<MatrixDouble> OpCalculatePiolaIncompressibleNH< DIM_0, DIM_1 >::invDefGradPtr
private

Definition at line 334 of file dynamic_first_order_con_law.cpp.

◆ lammeLambda

template<int DIM_0, int DIM_1>
double OpCalculatePiolaIncompressibleNH< DIM_0, DIM_1 >::lammeLambda
private

Definition at line 331 of file dynamic_first_order_con_law.cpp.

◆ mU

template<int DIM_0, int DIM_1>
double OpCalculatePiolaIncompressibleNH< DIM_0, DIM_1 >::mU
private

Definition at line 330 of file dynamic_first_order_con_law.cpp.

◆ shearModulus

template<int DIM_0, int DIM_1>
double OpCalculatePiolaIncompressibleNH< DIM_0, DIM_1 >::shearModulus
private

Definition at line 328 of file dynamic_first_order_con_law.cpp.


The documentation for this struct was generated from the following file:
NOSPACE
@ NOSPACE
Definition: definitions.h:83
OpCalculatePiolaIncompressibleNH::shearModulus
double shearModulus
Definition: dynamic_first_order_con_law.cpp:328
OpCalculatePiolaIncompressibleNH::dEt
boost::shared_ptr< VectorDouble > dEt
Definition: dynamic_first_order_con_law.cpp:335
FTensor::Kronecker_Delta
Kronecker Delta class.
Definition: Kronecker_Delta.hpp:15
MoFEM::ForcesAndSourcesCore::UserDataOperator::getGaussPts
MatrixDouble & getGaussPts()
matrix of integration (Gauss) points for Volume Element
Definition: ForcesAndSourcesCore.hpp:1236
OpCalculatePiolaIncompressibleNH::invDefGradPtr
boost::shared_ptr< MatrixDouble > invDefGradPtr
Definition: dynamic_first_order_con_law.cpp:334
OpCalculatePiolaIncompressibleNH::defGradPtr
boost::shared_ptr< MatrixDouble > defGradPtr
Definition: dynamic_first_order_con_law.cpp:333
OpCalculatePiolaIncompressibleNH::bulkModulus
double bulkModulus
Definition: dynamic_first_order_con_law.cpp:329
i
FTensor::Index< 'i', SPACE_DIM > i
Definition: hcurl_divergence_operator_2d.cpp:27
t_kd
constexpr auto t_kd
Definition: free_surface.cpp:137
FTensor::Index< 'i', SPACE_DIM >
OpCalculatePiolaIncompressibleNH::lammeLambda
double lammeLambda
Definition: dynamic_first_order_con_law.cpp:331
UserDataOperator
ForcesAndSourcesCore::UserDataOperator UserDataOperator
Definition: HookeElement.hpp:75
j
FTensor::Index< 'j', 3 > j
Definition: matrix_function.cpp:19
OpCalculatePiolaIncompressibleNH::mU
double mU
Definition: dynamic_first_order_con_law.cpp:330
OpCalculatePiolaIncompressibleNH::firstPiolaPtr
boost::shared_ptr< MatrixDouble > firstPiolaPtr
Definition: dynamic_first_order_con_law.cpp:332
k
FTensor::Index< 'k', 3 > k
Definition: matrix_function.cpp:20
MoFEM::ForcesAndSourcesCore::UserDataOperator::OPLAST
@ OPLAST
Definition: ForcesAndSourcesCore.hpp:571
MoFEMFunctionReturn
#define MoFEMFunctionReturn(a)
Last executable line of each PETSc function used for error handling. Replaces return()
Definition: definitions.h:429
MoFEMFunctionBegin
#define MoFEMFunctionBegin
First executable line of each MoFEM function, used for error handling. Final line of MoFEM functions ...
Definition: definitions.h:359
l
FTensor::Index< 'l', 3 > l
Definition: matrix_function.cpp:21