v0.14.0
Public Member Functions | Private Attributes | List of all members
LevelSet::OpRhsSkeleton Struct Reference
Inheritance diagram for LevelSet::OpRhsSkeleton:
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Collaboration diagram for LevelSet::OpRhsSkeleton:
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Public Member Functions

 OpRhsSkeleton (boost::shared_ptr< SideData > side_data_ptr, boost::shared_ptr< FaceSideEle > side_fe_ptr)
 
MoFEMErrorCode doWork (int side, EntityType type, EntitiesFieldData::EntData &data)
 Operator for linear form, usually to calculate values on right hand side. More...
 
- Public Member Functions inherited from MoFEM::FaceElementForcesAndSourcesCore::UserDataOperator
double getArea ()
 get area of face More...
 
VectorDoublegetNormal ()
 get triangle normal More...
 
VectorDoublegetTangent1 ()
 get triangle tangent 1 More...
 
VectorDoublegetTangent2 ()
 get triangle tangent 2 More...
 
auto getFTensor1Normal ()
 get normal as tensor More...
 
auto getFTensor1Tangent1 ()
 get tangentOne as tensor More...
 
auto getFTensor1Tangent2 ()
 get tangentTwo as tensor More...
 
int getNumNodes ()
 get element number of nodes More...
 
const EntityHandlegetConn ()
 get element connectivity More...
 
VectorDoublegetCoords ()
 get triangle coordinates More...
 
auto getFTensor1Coords ()
 get get coords at gauss points More...
 
MatrixDoublegetNormalsAtGaussPts ()
 if higher order geometry return normals at Gauss pts. More...
 
ublas::matrix_row< MatrixDoublegetNormalsAtGaussPts (const int gg)
 if higher order geometry return normals at Gauss pts. More...
 
MatrixDoublegetTangent1AtGaussPts ()
 if higher order geometry return tangent vector to triangle at Gauss pts. More...
 
MatrixDoublegetTangent2AtGaussPts ()
 if higher order geometry return tangent vector to triangle at Gauss pts. More...
 
auto getFTensor1NormalsAtGaussPts ()
 get normal at integration points More...
 
auto getFTensor1Tangent1AtGaussPts ()
 get tangent 1 at integration points More...
 
auto getFTensor1Tangent2AtGaussPts ()
 get tangent 2 at integration points More...
 
FaceElementForcesAndSourcesCoregetFaceFE ()
 return pointer to Generic Triangle Finite Element object More...
 
MoFEMErrorCode loopSideVolumes (const string fe_name, VolumeElementForcesAndSourcesCoreOnSide &fe_method)
 
- Public Member Functions inherited from MoFEM::ForcesAndSourcesCore::UserDataOperator
 UserDataOperator (const FieldSpace space, const char type=OPSPACE, const bool symm=true)
 
 UserDataOperator (const std::string field_name, const char type, const bool symm=true)
 
 UserDataOperator (const std::string row_field_name, const std::string col_field_name, const char type, const bool symm=true)
 
boost::shared_ptr< const NumeredEntFiniteElementgetNumeredEntFiniteElementPtr () const
 Return raw pointer to NumeredEntFiniteElement. More...
 
EntityHandle getFEEntityHandle () const
 Return finite element entity handle. More...
 
int getFEDim () const
 Get dimension of finite element. More...
 
EntityType getFEType () const
 Get dimension of finite element. More...
 
boost::weak_ptr< SideNumbergetSideNumberPtr (const int side_number, const EntityType type)
 Get the side number pointer. More...
 
EntityHandle getSideEntity (const int side_number, const EntityType type)
 Get the side entity. More...
 
int getNumberOfNodesOnElement () const
 Get the number of nodes on finite element. More...
 
MoFEMErrorCode getProblemRowIndices (const std::string filed_name, const EntityType type, const int side, VectorInt &indices) const
 Get row indices. More...
 
MoFEMErrorCode getProblemColIndices (const std::string filed_name, const EntityType type, const int side, VectorInt &indices) const
 Get col indices. More...
 
const FEMethodgetFEMethod () const
 Return raw pointer to Finite Element Method object. More...
 
int getOpType () const
 Get operator types. More...
 
void setOpType (const OpType type)
 Set operator type. More...
 
void addOpType (const OpType type)
 Add operator type. More...
 
int getNinTheLoop () const
 get number of finite element in the loop More...
 
int getLoopSize () const
 get size of elements in the loop More...
 
std::string getFEName () const
 Get name of the element. More...
 
ForcesAndSourcesCoregetPtrFE () const
 
ForcesAndSourcesCoregetSidePtrFE () const
 
ForcesAndSourcesCoregetRefinePtrFE () const
 
const PetscData::SwitchesgetDataCtx () const
 
const KspMethod::KSPContext getKSPCtx () const
 
const SnesMethod::SNESContext getSNESCtx () const
 
const TSMethod::TSContext getTSCtx () const
 
Vec getKSPf () const
 
Mat getKSPA () const
 
Mat getKSPB () const
 
Vec getSNESf () const
 
Vec getSNESx () const
 
Mat getSNESA () const
 
Mat getSNESB () const
 
Vec getTSu () const
 
Vec getTSu_t () const
 
Vec getTSu_tt () const
 
Vec getTSf () const
 
Mat getTSA () const
 
Mat getTSB () const
 
int getTSstep () const
 
double getTStime () const
 
double getTStimeStep () const
 
double getTSa () const
 
double getTSaa () const
 
MatrixDoublegetGaussPts ()
 matrix of integration (Gauss) points for Volume Element More...
 
auto getFTensor0IntegrationWeight ()
 Get integration weights. More...
 
MatrixDoublegetCoordsAtGaussPts ()
 Gauss points and weight, matrix (nb. of points x 3) More...
 
auto getFTensor1CoordsAtGaussPts ()
 Get coordinates at integration points assuming linear geometry. More...
 
double getMeasure () const
 get measure of element More...
 
doublegetMeasure ()
 get measure of element More...
 
MoFEMErrorCode loopSide (const string &fe_name, ForcesAndSourcesCore *side_fe, const size_t dim, const EntityHandle ent_for_side=0, const int verb=QUIET, const LogManager::SeverityLevel sev=Sev::noisy, AdjCache *adj_cache=nullptr)
 User calls this function to loop over elements on the side of face. This function calls finite element with its operator to do calculations. More...
 
MoFEMErrorCode loopThis (const string &fe_name, ForcesAndSourcesCore *this_fe, const int verb=QUIET, const LogManager::SeverityLevel sev=Sev::noisy)
 User calls this function to loop over the same element using a different set of integration points. This function calls finite element with its operator to do calculations. More...
 
MoFEMErrorCode loopParent (const string &fe_name, ForcesAndSourcesCore *parent_fe, const int verb=QUIET, const LogManager::SeverityLevel sev=Sev::noisy)
 User calls this function to loop over parent elements. This function calls finite element with its operator to do calculations. More...
 
MoFEMErrorCode loopChildren (const string &fe_name, ForcesAndSourcesCore *child_fe, const int verb=QUIET, const LogManager::SeverityLevel sev=Sev::noisy)
 User calls this function to loop over parent elements. This function calls finite element with its operator to do calculations. More...
 
- Public Member Functions inherited from MoFEM::DataOperator
 DataOperator (const bool symm=true)
 
virtual ~DataOperator ()=default
 
virtual MoFEMErrorCode doWork (int row_side, int col_side, EntityType row_type, EntityType col_type, EntitiesFieldData::EntData &row_data, EntitiesFieldData::EntData &col_data)
 Operator for bi-linear form, usually to calculate values on left hand side. More...
 
virtual MoFEMErrorCode opLhs (EntitiesFieldData &row_data, EntitiesFieldData &col_data)
 
virtual MoFEMErrorCode opRhs (EntitiesFieldData &data, const bool error_if_no_base=false)
 
bool getSymm () const
 Get if operator uses symmetry of DOFs or not. More...
 
void setSymm ()
 set if operator is executed taking in account symmetry More...
 
void unSetSymm ()
 unset if operator is executed for non symmetric problem More...
 

Private Attributes

boost::shared_ptr< SideDatasideDataPtr
 
boost::shared_ptr< FaceSideElesideFEPtr
 pointer to element to get data on edge/face sides More...
 
VectorDouble resSkelton
 

Additional Inherited Members

- Public Types inherited from MoFEM::ForcesAndSourcesCore::UserDataOperator
enum  OpType {
  OPROW = 1 << 0, OPCOL = 1 << 1, OPROWCOL = 1 << 2, OPSPACE = 1 << 3,
  OPLAST = 1 << 3
}
 Controls loop over entities on element. More...
 
using AdjCache = std::map< EntityHandle, std::vector< boost::weak_ptr< NumeredEntFiniteElement > >>
 
- Public Types inherited from MoFEM::DataOperator
using DoWorkLhsHookFunType = boost::function< MoFEMErrorCode(DataOperator *op_ptr, int row_side, int col_side, EntityType row_type, EntityType col_type, EntitiesFieldData::EntData &row_data, EntitiesFieldData::EntData &col_data)>
 
using DoWorkRhsHookFunType = boost::function< MoFEMErrorCode(DataOperator *op_ptr, int side, EntityType type, EntitiesFieldData::EntData &data)>
 
- Public Attributes inherited from MoFEM::ForcesAndSourcesCore::UserDataOperator
char opType
 
std::string rowFieldName
 
std::string colFieldName
 
FieldSpace sPace
 
- Public Attributes inherited from MoFEM::DataOperator
DoWorkLhsHookFunType doWorkLhsHook
 
DoWorkRhsHookFunType doWorkRhsHook
 
bool sYmm
 If true assume that matrix is symmetric structure. More...
 
std::array< bool, MBMAXTYPE > doEntities
 If true operator is executed for entity. More...
 
booldoVertices
 \deprectaed If false skip vertices More...
 
booldoEdges
 \deprectaed If false skip edges More...
 
booldoQuads
 \deprectaed More...
 
booldoTris
 \deprectaed More...
 
booldoTets
 \deprectaed More...
 
booldoPrisms
 \deprectaed More...
 
- Static Public Attributes inherited from MoFEM::ForcesAndSourcesCore::UserDataOperator
static const char *const OpTypeNames []
 
- Protected Attributes inherited from MoFEM::ForcesAndSourcesCore::UserDataOperator
ForcesAndSourcesCoreptrFE
 

Detailed Description

Examples
level_set.cpp.

Definition at line 435 of file level_set.cpp.

Constructor & Destructor Documentation

◆ OpRhsSkeleton()

LevelSet::OpRhsSkeleton::OpRhsSkeleton ( boost::shared_ptr< SideData side_data_ptr,
boost::shared_ptr< FaceSideEle side_fe_ptr 
)
Examples
level_set.cpp.

Definition at line 598 of file level_set.cpp.

602  sideDataPtr(side_data_ptr), sideFEPtr(side_fe_ptr) {}

Member Function Documentation

◆ doWork()

MoFEMErrorCode LevelSet::OpRhsSkeleton::doWork ( int  side,
EntityType  type,
EntitiesFieldData::EntData data 
)
virtual

Operator for linear form, usually to calculate values on right hand side.

Reimplemented from MoFEM::DataOperator.

Examples
level_set.cpp.

Definition at line 703 of file level_set.cpp.

704  {
706 
707  // Collect data from side domain elements
708  CHKERR loopSideFaces("dFE", *sideFEPtr);
709  const auto in_the_loop =
710  sideFEPtr->nInTheLoop; // return number of elements on the side
711 
712  auto not_side = [](auto s) {
713  return s == LEFT_SIDE ? RIGHT_SIDE : LEFT_SIDE;
714  };
715 
716  auto get_ntensor = [](auto &base_mat) {
718  &*base_mat.data().begin());
719  };
720 
721  if (in_the_loop > 0) {
722 
723  // get normal of the face or edge
724  auto t_normal = getFTensor1Normal();
725  const auto nb_gauss_pts = getGaussPts().size2();
726 
727  for (auto s0 : {LEFT_SIDE, RIGHT_SIDE}) {
728 
729  // gent number of DOFs on the right side.
730  const auto nb_rows = sideDataPtr->indicesRowSideMap[s0].size();
731 
732  if (nb_rows) {
733 
734  resSkelton.resize(nb_rows, false);
735  resSkelton.clear();
736 
737  // get orientation of the local element edge
738  const auto opposite_s0 = not_side(s0);
739  const auto sense_row = sideDataPtr->senseMap[s0];
740 #ifndef NDEBUG
741  const auto opposite_sense_row = sideDataPtr->senseMap[opposite_s0];
742  if (sense_row * opposite_sense_row > 0)
743  SETERRQ(PETSC_COMM_SELF, MOFEM_DATA_INCONSISTENCY,
744  "Should be opposite sign");
745 #endif
746 
747  // iterate the side cols
748  const auto nb_row_base_functions =
749  sideDataPtr->rowBaseSideMap[s0].size2();
750 
751  auto t_w = getFTensor0IntegrationWeight();
752  auto arr_t_l = make_array(
753  getFTensor2FromMat<DIM1, DIM2>(sideDataPtr->lVec[LEFT_SIDE]),
754  getFTensor2FromMat<DIM1, DIM2>(sideDataPtr->lVec[RIGHT_SIDE]));
755  auto arr_t_vel = make_array(
756  getFTensor1FromMat<SPACE_DIM>(sideDataPtr->velMat[LEFT_SIDE]),
757  getFTensor1FromMat<SPACE_DIM>(sideDataPtr->velMat[RIGHT_SIDE]));
758 
759  auto next = [&]() {
760  for (auto &t_l : arr_t_l)
761  ++t_l;
762  for (auto &t_vel : arr_t_vel)
763  ++t_vel;
764  };
765 
766 #ifndef NDEBUG
767  if (nb_gauss_pts != sideDataPtr->rowBaseSideMap[s0].size1())
768  SETERRQ(PETSC_COMM_SELF, MOFEM_DATA_INCONSISTENCY,
769  "Inconsistent number of DOFs");
770 #endif
771 
772  auto t_row_base = get_ntensor(sideDataPtr->rowBaseSideMap[s0]);
773  for (int gg = 0; gg != nb_gauss_pts; ++gg) {
775  t_vel(i) = (arr_t_vel[LEFT_SIDE](i) + arr_t_vel[RIGHT_SIDE](i)) / 2.;
776  const auto dot = sense_row * (t_normal(i) * t_vel(i));
777  const auto l_upwind_side = (dot > 0) ? s0 : opposite_s0;
778  const auto l_upwind = arr_t_l[l_upwind_side];
780  t_res(I, J) = t_w * dot * l_upwind(I, J);
781  next();
782  ++t_w;
783 
784  auto t_res_skeleton =
785  getFTensor2FromPtr<DIM1, DIM2>(&*resSkelton.data().begin());
786  auto rr = 0;
787  for (; rr != nb_rows; ++rr) {
788  t_res_skeleton(I, J) += t_row_base * t_res(I, J);
789  ++t_row_base;
790  ++t_res_skeleton;
791  }
792  for (; rr < nb_row_base_functions; ++rr) {
793  ++t_row_base;
794  }
795  }
796  // assemble local operator vector to global vector
798  sideDataPtr->indicesRowSideMap[s0].size(),
799  &*sideDataPtr->indicesRowSideMap[s0].begin(),
800  &*resSkelton.begin(), ADD_VALUES);
801  }
802  }
803  }
804 
806 }

Member Data Documentation

◆ resSkelton

VectorDouble LevelSet::OpRhsSkeleton::resSkelton
private

Definition at line 447 of file level_set.cpp.

◆ sideDataPtr

boost::shared_ptr<SideData> LevelSet::OpRhsSkeleton::sideDataPtr
private

Definition at line 443 of file level_set.cpp.

◆ sideFEPtr

boost::shared_ptr<FaceSideEle> LevelSet::OpRhsSkeleton::sideFEPtr
private

pointer to element to get data on edge/face sides

Definition at line 445 of file level_set.cpp.


The documentation for this struct was generated from the following file:
NOSPACE
@ NOSPACE
Definition: definitions.h:83
FTensor::Tensor1
Definition: Tensor1_value.hpp:8
MoFEM::ForcesAndSourcesCore::UserDataOperator::OPSPACE
@ OPSPACE
operator do Work is execute on space data
Definition: ForcesAndSourcesCore.hpp:570
LevelSet::OpRhsSkeleton::sideFEPtr
boost::shared_ptr< FaceSideEle > sideFEPtr
pointer to element to get data on edge/face sides
Definition: level_set.cpp:445
J
FTensor::Index< 'J', DIM1 > J
Definition: level_set.cpp:30
MoFEM::ForcesAndSourcesCore::UserDataOperator::getTSf
Vec getTSf() const
Definition: ForcesAndSourcesCore.hpp:1167
MoFEM::VecSetValues
MoFEMErrorCode VecSetValues(Vec V, const EntitiesFieldData::EntData &data, const double *ptr, InsertMode iora)
Assemble PETSc vector.
Definition: EntitiesFieldData.hpp:1576
FTensor::Tensor2
Definition: Tensor2_value.hpp:16
MoFEM::ForcesAndSourcesCore::UserDataOperator::getFTensor0IntegrationWeight
auto getFTensor0IntegrationWeight()
Get integration weights.
Definition: ForcesAndSourcesCore.hpp:1239
I
FTensor::Index< 'I', DIM1 > I
Definition: level_set.cpp:29
MoFEM::ForcesAndSourcesCore::UserDataOperator::getGaussPts
MatrixDouble & getGaussPts()
matrix of integration (Gauss) points for Volume Element
Definition: ForcesAndSourcesCore.hpp:1235
CHKERR
#define CHKERR
Inline error check.
Definition: definitions.h:535
MoFEM::FaceElementForcesAndSourcesCore::UserDataOperator::getFTensor1Normal
auto getFTensor1Normal()
get normal as tensor
Definition: FaceElementForcesAndSourcesCore.hpp:255
Poisson2DiscontGalerkinOperators::get_ntensor
auto get_ntensor(T &base_mat)
Definition: PoissonDiscontinousGalerkin.hpp:90
LevelSet::OpRhsSkeleton::resSkelton
VectorDouble resSkelton
Definition: level_set.cpp:447
LevelSet::OpRhsSkeleton::sideDataPtr
boost::shared_ptr< SideData > sideDataPtr
Definition: level_set.cpp:443
i
FTensor::Index< 'i', SPACE_DIM > i
Definition: level_set.cpp:579
BoundaryEleOp
BoundaryEle::UserDataOperator BoundaryEleOp
Definition: level_set.cpp:44
FTensor::Tensor0
Definition: Tensor0.hpp:16
MOFEM_DATA_INCONSISTENCY
@ MOFEM_DATA_INCONSISTENCY
Definition: definitions.h:31
LevelSet::LEFT_SIDE
@ LEFT_SIDE
Definition: level_set.cpp:367
MoFEM::make_array
constexpr auto make_array(Arg &&...arg)
Create Array.
Definition: Templates.hpp:1961
MoFEMFunctionReturn
#define MoFEMFunctionReturn(a)
Last executable line of each PETSc function used for error handling. Replaces return()
Definition: definitions.h:416
LevelSet::RIGHT_SIDE
@ RIGHT_SIDE
Definition: level_set.cpp:367
MoFEMFunctionBegin
#define MoFEMFunctionBegin
First executable line of each MoFEM function, used for error handling. Final line of MoFEM functions ...
Definition: definitions.h:346