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enum | SemaphoresBuildMofem {
BUILD_FIELD = 1 << 0,
BUILD_FE = 1 << 1,
BUILD_ADJ = 1 << 2,
BUILD_PROBLEM = 1 << 3,
PARTITION_PROBLEM = 1 << 4,
PARTITION_FE = 1 << 5,
PARTITION_GHOST_DOFS = 1 << 6,
PARTITION_MESH = 1 << 7
} |
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static MoFEMErrorCode | Initialize (int *argc, char ***args, const char file[], const char help[]) |
| Initializes the MoFEM database PETSc, MOAB and MPI. More...
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static MoFEMErrorCode | Finalize () |
| Checks for options to be called at the conclusion of the program. More...
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static void | setRefEntBasicDataPtr (MoFEM::Interface &m_field, boost::shared_ptr< BasicEntityData > &ptr) |
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static boost::shared_ptr< RefEntityTmp< 0 > > | makeSharedRefEntity (MoFEM::Interface &m_field, const EntityHandle ent) |
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static MoFEMErrorCode | getLibVersion (Version &version) |
| Get library version. More...
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static MoFEMErrorCode | getFileVersion (moab::Interface &moab, Version &version) |
| Get database major version. More...
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static MoFEMErrorCode | setFileVersion (moab::Interface &moab, Version version=Version(MoFEM_VERSION_MAJOR, MoFEM_VERSION_MINOR, MoFEM_VERSION_BUILD)) |
| Get database major version. More...
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static MoFEMErrorCode | getInterfaceVersion (Version &version) |
| Get database major version. More...
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template<int V> |
| CoreTmp (moab::Interface &moab, MPI_Comm comm, const int verbose, CoreValue< V >) |
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MoFEMErrorCode | coreGenericConstructor (moab::Interface &moab, MPI_Comm comm, const int verbose) |
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MoFEMErrorCode | addProblem (const BitProblemId id, const std::string &name, int verb=DEFAULT_VERBOSITY) |
| add problem More...
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MoFEMErrorCode | getTags (int verb=DEFAULT_VERBOSITY) |
| Get tag handles. More...
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MoFEMErrorCode | clearMap () |
| Cleaning database. More...
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MoFEMErrorCode | registerSubInterfaces () |
| Register insterfaces. More...
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BitProblemId | getProblemShift () |
| Return unique problem Id. More...
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MoFEMErrorCode | initialiseDatabaseFromMesh (int verb=DEFAULT_VERBOSITY) |
| Initialize database getting information on mesh. More...
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MoFEMErrorCode | getOptions (int verb=DEFAULT_VERBOSITY) |
| Get core options from command line. More...
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template<class IFACE > |
MoFEMErrorCode | regSubInterface () |
| Register sub-interfaces in core interface. More...
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template<class IFACE > |
MoFEMErrorCode | regEvents () |
| Register petsc events. More...
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boost::shared_ptr< BasicEntityData > & | get_basic_entity_data_ptr () |
| Get pointer to basic entity data. More...
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moab::Interface & | get_moab () |
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const moab::Interface & | get_moab () const |
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MoFEMErrorCode | setMoabInterface (moab::Interface &new_moab, int verb=VERBOSE) |
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MoFEMErrorCode | check_number_of_ents_in_ents_field (const std::string &name) const |
| check data consistency in entitiesPtr More...
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MoFEMErrorCode | check_number_of_ents_in_ents_field () const |
| check data consistency in entitiesPtr More...
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MoFEMErrorCode | check_number_of_ents_in_ents_finite_element (const std::string &name) const |
| check data consistency in entsFiniteElements More...
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MoFEMErrorCode | check_number_of_ents_in_ents_finite_element () const |
| check data consistency in entsFiniteElements More...
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MoFEMErrorCode | clear_database (int verb=DEFAULT_VERBOSITY) |
| Clear database. More...
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MoFEMErrorCode | rebuild_database (int verb=DEFAULT_VERBOSITY) |
| Clear database and initialize it once again. More...
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MeshsetsManager * | get_meshsets_manager_ptr () |
| get MeshsetsManager pointer More...
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const MeshsetsManager * | get_meshsets_manager_ptr () const |
| get MeshsetsManager pointer More...
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MeshsetsManager & | get_meshsets_manager () |
| get MeshsetsManager pointer More...
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const MeshsetsManager & | get_meshsets_manager () const |
| get MeshsetsManager pointer More...
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MoFEMErrorCode | remove_parents_by_ents (const Range &ents, int verb=DEFAULT_VERBOSITY) |
| Remove parents from entities. More...
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MoFEMErrorCode | remove_parents_by_bit_ref (const BitRefLevel bit, const BitRefLevel mask, int verb=DEFAULT_VERBOSITY) |
| Remove parent from entities on bit level. More...
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MoFEMErrorCode | remove_parents_by_parents (const Range &ents, int verb=DEFAULT_VERBOSITY) |
| Remove paremts from entities having parents in passed range. More...
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MoFEMErrorCode | remove_ents (const Range ents, int verb=DEFAULT_VERBOSITY) |
| remove entities form mofem database More...
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MoFEMErrorCode | remove_ents_by_bit_ref (const BitRefLevel bit, const BitRefLevel mask, int verb=DEFAULT_VERBOSITY) |
| remove entities form mofem database More...
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MoFEMErrorCode | delete_ents_by_bit_ref (const BitRefLevel bit, const BitRefLevel mask, const bool remove_parent=false, int verb=DEFAULT_VERBOSITY, MoFEMTypes mf=MF_ZERO) |
| delete entities form mofem and moab database More...
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virtual MoFEMErrorCode | add_broken_field (const std::string name, const FieldSpace space, const FieldApproximationBase base, const FieldCoefficientsNumber nb_coefficients, std::vector< std::pair< EntityType, std::function< MoFEMErrorCode(BaseFunction::DofsSideMap &)> >> list_dof_side_map, const TagType tag_type=MB_TAG_SPARSE, const enum MoFEMTypes bh=MF_EXCL, int verb=DEFAULT_VERBOSITY) |
| Add field. More...
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virtual MoFEMErrorCode | add_field (const std::string name, const FieldSpace space, const FieldApproximationBase base, const FieldCoefficientsNumber nb_coefficients, const TagType tag_type=MB_TAG_SPARSE, const enum MoFEMTypes bh=MF_EXCL, int verb=DEFAULT_VERBOSITY) |
| Add field. More...
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MoFEMErrorCode | delete_field (const std::string name, int verb=DEFAULT_VERBOSITY) |
| Delete field. More...
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MoFEMErrorCode | addField (const std::string &name, const FieldSpace space, const FieldContinuity continuity, const FieldApproximationBase base, const FieldCoefficientsNumber nb_coefficients, const TagType tag_type, const enum MoFEMTypes bh, int verb) |
| Template for add_field. More...
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MoFEMErrorCode | addEntsToFieldByDim (const Range &ents, const int dim, const std::string &name, int verb=DEFAULT_VERBOSITY) |
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MoFEMErrorCode | add_ents_to_field_by_dim (const Range &ents, const int dim, const std::string &name, int verb=DEFAULT_VERBOSITY) |
| Add entities to field meshset. More...
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MoFEMErrorCode | add_ents_to_field_by_type (const Range &ents, const EntityType type, const std::string &name, int verb=DEFAULT_VERBOSITY) |
| Add entities to field meshset. More...
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MoFEMErrorCode | add_ents_to_field_by_dim (const EntityHandle meshset, const int dim, const std::string &name, const bool recursive=true, int verb=DEFAULT_VERBOSITY) |
| Add entities to field meshset. More...
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MoFEMErrorCode | add_ents_to_field_by_type (const EntityHandle meshset, const EntityType type, const std::string &name, const bool recursive=true, int verb=DEFAULT_VERBOSITY) |
| Add entities to field meshset. More...
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MoFEMErrorCode | create_vertices_and_add_to_field (const std::string name, const double coords[], int size, int verb=DEFAULT_VERBOSITY) |
| Create a vertices and add to field object. More...
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MoFEMErrorCode | setFieldOrder (const Range &ents, const BitFieldId id, const ApproximationOrder order, int ver) |
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MoFEMErrorCode | setFieldOrderImpl (boost::shared_ptr< Field > field_ptr, const Range &ents, const ApproximationOrder order, int verb) |
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MoFEMErrorCode | set_field_order (const Range &ents, const BitFieldId id, const ApproximationOrder order, int verb=DEFAULT_VERBOSITY) |
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MoFEMErrorCode | set_field_order (const EntityHandle meshset, const EntityType type, const BitFieldId id, const ApproximationOrder order, int verb=DEFAULT_VERBOSITY) |
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MoFEMErrorCode | set_field_order (const Range &ents, const std::string &name, const ApproximationOrder order, int verb=DEFAULT_VERBOSITY) |
| Set order approximation of the entities in the field. More...
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MoFEMErrorCode | set_field_order (const EntityHandle meshset, const EntityType type, const std::string &name, const ApproximationOrder order, int verb=DEFAULT_VERBOSITY) |
| Set order approximation of the entities in the field. More...
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MoFEMErrorCode | set_field_order_by_entity_type_and_bit_ref (const BitRefLevel &bit, const BitRefLevel &mask, const EntityType type, const BitFieldId id, const ApproximationOrder order, int verb=DEFAULT_VERBOSITY) |
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MoFEMErrorCode | set_field_order_by_entity_type_and_bit_ref (const BitRefLevel &bit, const BitRefLevel &mask, const EntityType type, const std::string &name, const ApproximationOrder order, int verb=DEFAULT_VERBOSITY) |
| Set order approximation of the entities in the field. More...
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MoFEMErrorCode | buildFieldForNoFieldImpl (boost::shared_ptr< Field > field_ptr, std::map< EntityType, int > &dof_counter, int verb) |
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MoFEMErrorCode | buildFieldForNoField (const BitFieldId id, std::map< EntityType, int > &dof_counter, int verb=DEFAULT_VERBOSITY) |
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MoFEMErrorCode | buildFieldForL2H1HcurlHdiv (const BitFieldId id, std::map< EntityType, int > &dof_counter, std::map< EntityType, int > &inactive_dof_counter, int verb=DEFAULT_VERBOSITY) |
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MoFEMErrorCode | buildField (const boost::shared_ptr< Field > &field, int verb=DEFAULT_VERBOSITY) |
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MoFEMErrorCode | build_fields (int verb=DEFAULT_VERBOSITY) |
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MoFEMErrorCode | build_field (const std::string field_name, int verb=DEFAULT_VERBOSITY) |
| build field by name More...
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MoFEMErrorCode | clear_inactive_dofs (int verb=DEFAULT_VERBOSITY) |
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MoFEMErrorCode | clear_dofs_fields_by_bit_ref (const BitRefLevel bit, const BitRefLevel mask, int verb=DEFAULT_VERBOSITY) |
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MoFEMErrorCode | clear_dofs_fields (const Range ents, int verb=DEFAULT_VERBOSITY) |
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MoFEMErrorCode | clear_dofs_fields (const std::string name, const Range ents, int verb=DEFAULT_VERBOSITY) |
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MoFEMErrorCode | clear_ents_fields_by_bit_ref (const BitRefLevel bit, const BitRefLevel mask, int verb=DEFAULT_VERBOSITY) |
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MoFEMErrorCode | clear_ents_fields (const Range ents, int verb=DEFAULT_VERBOSITY) |
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MoFEMErrorCode | clear_ents_fields (const std::string name, const Range ents, int verb=DEFAULT_VERBOSITY) |
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MoFEMErrorCode | remove_ents_from_field_by_bit_ref (const BitRefLevel bit, const BitRefLevel mask, int verb=DEFAULT_VERBOSITY) |
| remove entities from field More...
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MoFEMErrorCode | remove_ents_from_field (const std::string name, const EntityHandle meshset, const EntityType type, int verb=DEFAULT_VERBOSITY) |
| remove entities from field More...
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MoFEMErrorCode | remove_ents_from_field (const std::string name, const Range ents, int verb=DEFAULT_VERBOSITY) |
| remove entities from field More...
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MoFEMErrorCode | remove_ents_from_field (const Range ents, int verb=DEFAULT_VERBOSITY) |
| remove entities from all fields More...
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MoFEMErrorCode | list_dofs_by_field_name (const std::string &name) const |
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MoFEMErrorCode | list_fields () const |
| list entities in the field More...
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BitFieldId | get_field_id (const std::string &name) const |
| Get field Id. More...
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FieldBitNumber | get_field_bit_number (const std::string name) const |
| get field bit number More...
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std::string | get_field_name (const BitFieldId id) const |
| get field name from id More...
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EntityHandle | get_field_meshset (const BitFieldId id) const |
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EntityHandle | get_field_meshset (const std::string name) const |
| get field meshset More...
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MoFEMErrorCode | get_field_entities_by_dimension (const std::string name, int dim, Range &ents) const |
| get entities in the field by dimension More...
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MoFEMErrorCode | get_field_entities_by_type (const std::string name, EntityType type, Range &ents) const |
| get entities in the field by type More...
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MoFEMErrorCode | get_field_entities_by_handle (const std::string name, Range &ents) const |
| get entities in the field by handle More...
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bool | check_field (const std::string &name) const |
| check if field is in database More...
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const Field * | get_field_structure (const std::string &name, enum MoFEMTypes bh=MF_EXIST) const |
| get field structure More...
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const FiniteElement * | get_finite_element_structure (const std::string &name, enum MoFEMTypes bh=MF_EXCL) const |
| get finite element struture More...
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bool | check_finite_element (const std::string &name) const |
| Check if finite element is in database. More...
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MoFEMErrorCode | add_finite_element (const std::string &fe_name, enum MoFEMTypes bh=MF_EXCL, int verb=DEFAULT_VERBOSITY) |
| add finite element More...
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MoFEMErrorCode | modify_finite_element_adjacency_table (const std::string &fe_name, const EntityType type, ElementAdjacencyFunct function) |
| modify finite element table, only for advanced user More...
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MoFEMErrorCode | modify_finite_element_add_field_data (const std::string &fe_name, const std::string name_filed) |
| set finite element field data More...
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MoFEMErrorCode | modify_finite_element_add_field_row (const std::string &fe_name, const std::string name_row) |
| set field row which finite element use More...
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MoFEMErrorCode | modify_finite_element_add_field_col (const std::string &fe_name, const std::string name_col) |
| set field col which finite element use More...
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MoFEMErrorCode | modify_finite_element_off_field_data (const std::string &fe_name, const std::string name_filed) |
| unset finite element field data More...
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MoFEMErrorCode | modify_finite_element_off_field_row (const std::string &fe_name, const std::string name_row) |
| unset field row which finite element use More...
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MoFEMErrorCode | modify_finite_element_off_field_col (const std::string &fe_name, const std::string name_col) |
| unset field col which finite element use More...
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MoFEMErrorCode | add_ents_to_finite_element_by_type (const EntityHandle meshset, const EntityType type, const std::string &name, const bool recursive=true) |
| add entities to finite element More...
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MoFEMErrorCode | add_ents_to_finite_element_by_dim (const EntityHandle meshset, const int dim, const std::string &name, const bool recursive=true) |
| add entities to finite element More...
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MoFEMErrorCode | add_ents_to_finite_element_by_type (const Range &ents, const EntityType type, const std::string &name) |
| add entities to finite elements More...
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MoFEMErrorCode | add_ents_to_finite_element_by_dim (const Range &ents, const int dim, const std::string &name) |
| add entities to finite elements More...
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MoFEMErrorCode | add_ents_to_finite_element_by_bit_ref (const BitRefLevel &bit, const BitRefLevel &mask, const std::string &name, EntityType type, int verb=DEFAULT_VERBOSITY) |
| add TET entities from given refinement level to finite element database given by name More...
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MoFEMErrorCode | add_ents_to_finite_element_by_MESHSET (const EntityHandle meshset, const std::string &name, const bool recursive=false) |
| add MESHSET element to finite element database given by name More...
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DEPRECATED MoFEMErrorCode | add_ents_to_finite_element_EntType_by_bit_ref (const BitRefLevel &bit, const std::string &name, EntityType type, int verb=DEFAULT_VERBOSITY) |
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DEPRECATED MoFEMErrorCode | add_ents_to_finite_element_EntType_by_bit_ref (const BitRefLevel &bit, const BitRefLevel &mask, const std::string &name, EntityType type, int verb=DEFAULT_VERBOSITY) |
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MoFEMErrorCode | remove_ents_from_finite_element_by_bit_ref (const BitRefLevel bit, const BitRefLevel mask, int verb=DEFAULT_VERBOSITY) |
| remove elements from given refinement level to finite element database More...
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MoFEMErrorCode | remove_ents_from_finite_element (const std::string name, const EntityHandle meshset, const EntityType type, int verb=DEFAULT_VERBOSITY) |
| remove entities from given refinement level to finite element database More...
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MoFEMErrorCode | remove_ents_from_finite_element (const std::string name, const Range ents, int verb=DEFAULT_VERBOSITY) |
| remove entities from finite element database More...
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MoFEMErrorCode | remove_ents_from_finite_element (const Range ents, int verb=DEFAULT_VERBOSITY) |
| remove entities from finite elements in database More...
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MoFEMErrorCode | delete_finite_element (const std::string name, int verb=DEFAULT_VERBOSITY) |
| delete finite element from mofem database More...
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BitFEId | getBitFEId (const std::string &fe_name) const |
| Get field Id. More...
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std::string | getBitFEIdName (const BitFEId id) const |
| Get field name. More...
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EntityHandle | get_finite_element_meshset (const BitFEId id) const |
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EntityHandle | get_finite_element_meshset (const std::string name) const |
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MoFEMErrorCode | get_finite_element_entities_by_dimension (const std::string name, int dim, Range &ents) const |
| get entities in the finite element by dimension More...
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MoFEMErrorCode | get_finite_element_entities_by_type (const std::string name, EntityType type, Range &ents) const |
| get entities in the finite element by type More...
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MoFEMErrorCode | get_finite_element_entities_by_handle (const std::string name, Range &ents) const |
| get entities in the finite element by handle More...
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MoFEMErrorCode | list_finite_elements () const |
| list finite elements in database More...
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MoFEMErrorCode | add_problem (const std::string &name, enum MoFEMTypes bh=MF_EXCL, int verb=DEFAULT_VERBOSITY) |
| Add problem. More...
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bool | check_problem (const std::string name) |
| check if problem exist More...
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MoFEMErrorCode | delete_problem (const std::string name) |
| Delete problem. More...
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MoFEMErrorCode | modify_problem_add_finite_element (const std::string name_problem, const std::string &fe_name) |
| add finite element to problem, this add entities assigned to finite element to a particular problem More...
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MoFEMErrorCode | modify_problem_unset_finite_element (const std::string name_problem, const std::string &fe_name) |
| unset finite element from problem, this remove entities assigned to finite element to a particular problem More...
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MoFEMErrorCode | modify_problem_ref_level_add_bit (const std::string &name_problem, const BitRefLevel &bit) |
| add ref level to problem More...
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MoFEMErrorCode | modify_problem_ref_level_set_bit (const std::string &name_problem, const BitRefLevel &bit) |
| set ref level for problem More...
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MoFEMErrorCode | modify_problem_mask_ref_level_add_bit (const std::string &name_problem, const BitRefLevel &bit) |
| set dof mask ref level for problem More...
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MoFEMErrorCode | modify_problem_mask_ref_level_set_bit (const std::string &name_problem, const BitRefLevel &bit) |
| set dof mask ref level for problem More...
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BitProblemId | getBitProblemId (const std::string &name) const |
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MoFEMErrorCode | list_problem () const |
| list problems More...
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MoFEMErrorCode | clear_problem (const std::string name, int verb=DEFAULT_VERBOSITY) |
| clear problem More...
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MoFEMErrorCode | clear_problems (int verb=DEFAULT_VERBOSITY) |
| clear problems More...
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MoFEMErrorCode | build_finite_elements (int verb=DEFAULT_VERBOSITY) |
| Build finite elements. More...
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MoFEMErrorCode | build_finite_elements (const BitRefLevel &bit, int verb=DEFAULT_VERBOSITY) |
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MoFEMErrorCode | build_finite_elements (const string fe_name, const Range *const ents_ptr=nullptr, int verb=DEFAULT_VERBOSITY) |
| Build finite elements. More...
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MoFEMErrorCode | buildFiniteElements (const boost::shared_ptr< FiniteElement > &fe, const Range *ents_ptr=NULL, int verb=DEFAULT_VERBOSITY) |
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MoFEMErrorCode | clear_finite_elements_by_bit_ref (const BitRefLevel bit, const BitRefLevel mask, int verb=DEFAULT_VERBOSITY) |
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MoFEMErrorCode | clear_finite_elements (const Range &ents, int verb=DEFAULT_VERBOSITY) |
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MoFEMErrorCode | clear_finite_elements (const std::string &fe_name, const Range &ents, int verb=DEFAULT_VERBOSITY) |
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MoFEMErrorCode | get_problem_finite_elements_entities (const std::string name, const std::string &fe_name, const EntityHandle meshset) |
| add finite elements to the meshset More...
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DEPRECATED MoFEMErrorCode | build_problem_on_distributed_mesh (int verb=DEFAULT_VERBOSITY) |
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DEPRECATED MoFEMErrorCode | build_problems (int verb=DEFAULT_VERBOSITY) |
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MoFEMErrorCode | build_adjacencies (const Range &ents, int verb=DEFAULT_VERBOSITY) |
| build adjacencies More...
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MoFEMErrorCode | build_adjacencies (const BitRefLevel &bit, int verb=DEFAULT_VERBOSITY) |
| build adjacencies More...
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MoFEMErrorCode | build_adjacencies (const BitRefLevel &bit, const BitRefLevel &mask, int verb=DEFAULT_VERBOSITY) |
| build adjacencies More...
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MoFEMErrorCode | clear_adjacencies_entities (const BitRefLevel bit, const BitRefLevel mask, int verb=DEFAULT_VERBOSITY) |
| clear adjacency map for entities on given bit level More...
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MoFEMErrorCode | clear_adjacencies_entities (const Range ents, int verb=DEFAULT_VERBOSITY) |
| clear adjacencies for field entities by entities More...
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MoFEMErrorCode | clear_adjacencies_entities (const std::string name, const Range ents, int verb=DEFAULT_VERBOSITY) |
| clear adjacencies for field entities by entities and field namd More...
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MoFEMErrorCode | clear_adjacencies_finite_elements (const BitRefLevel bit, const BitRefLevel mask, int verb=DEFAULT_VERBOSITY) |
| clear adjacency map for finite elements on given bit level More...
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MoFEMErrorCode | clear_adjacencies_finite_elements (const Range ents, int verb=DEFAULT_VERBOSITY) |
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MoFEMErrorCode | clear_adjacencies_finite_elements (const std::string name, const Range ents, int verb=DEFAULT_VERBOSITY) |
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MoFEMErrorCode | problem_basic_method_preProcess (const Problem *problem_ptr, BasicMethod &method, int verb=DEFAULT_VERBOSITY) |
| Set data for BasicMethod. More...
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MoFEMErrorCode | problem_basic_method_preProcess (const std::string &problem_name, BasicMethod &method, int verb=DEFAULT_VERBOSITY) |
| Set data for BasicMethod. More...
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MoFEMErrorCode | problem_basic_method_postProcess (const Problem *problem_ptr, BasicMethod &method, int verb=DEFAULT_VERBOSITY) |
| Set data for BasicMethod. More...
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MoFEMErrorCode | problem_basic_method_postProcess (const std::string &problem_name, BasicMethod &method, int verb=DEFAULT_VERBOSITY) |
| Set data for BasicMethod. More...
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MoFEMErrorCode | cache_problem_entities (const std::string prb_name, CacheTupleWeakPtr cache_ptr) |
| Cache variables. More...
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MoFEMErrorCode | loop_finite_elements (const Problem *problem_ptr, const std::string &fe_name, FEMethod &method, int lower_rank, int upper_rank, boost::shared_ptr< NumeredEntFiniteElement_multiIndex > fe_ptr=nullptr, MoFEMTypes bh=MF_EXIST, CacheTupleWeakPtr cache_ptr=CacheTupleSharedPtr(), int verb=DEFAULT_VERBOSITY) |
| Make a loop over finite elements on partitions from upper to lower rank. More...
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MoFEMErrorCode | loop_finite_elements (const std::string problem_name, const std::string &fe_name, FEMethod &method, int lower_rank, int upper_rank, boost::shared_ptr< NumeredEntFiniteElement_multiIndex > fe_ptr=nullptr, MoFEMTypes bh=MF_EXIST, CacheTupleWeakPtr cache_ptr=CacheTupleSharedPtr(), int verb=DEFAULT_VERBOSITY) |
| Make a loop over finite elements on partitions from upper to lower rank. More...
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MoFEMErrorCode | loop_finite_elements (const std::string problem_name, const std::string &fe_name, FEMethod &method, boost::shared_ptr< NumeredEntFiniteElement_multiIndex > fe_ptr=nullptr, MoFEMTypes bh=MF_EXIST, CacheTupleWeakPtr cache_ptr=CacheTupleSharedPtr(), int verb=DEFAULT_VERBOSITY) |
| Make a loop over finite elements. More...
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MoFEMErrorCode | loop_dofs (const Problem *problem_ptr, const std::string &field_name, RowColData rc, DofMethod &method, int lower_rank, int upper_rank, int verb=DEFAULT_VERBOSITY) |
| Make a loop over dofs. More...
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MoFEMErrorCode | loop_dofs (const std::string &problem_name, const std::string &field_name, RowColData rc, DofMethod &method, int lower_rank, int upper_rank, int verb=DEFAULT_VERBOSITY) |
| Make a loop over dofs. More...
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MoFEMErrorCode | loop_dofs (const std::string &problem_name, const std::string &field_name, RowColData rc, DofMethod &method, int verb=DEFAULT_VERBOSITY) |
| Make a loop over dofs. More...
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MoFEMErrorCode | loop_dofs (const std::string &field_name, DofMethod &method, int verb=DEFAULT_VERBOSITY) |
| Make a loop over dofs. More...
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MoFEMErrorCode | loop_entities (const Problem *problem_ptr, const std::string field_name, RowColData rc, EntityMethod &method, int lower_rank, int upper_rank, int verb=DEFAULT_VERBOSITY) |
| Loop over field entities in the problem. More...
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MoFEMErrorCode | loop_entities (const std::string problem_name, const std::string field_name, RowColData rc, EntityMethod &method, int lower_rank, int upper_rank, int verb=DEFAULT_VERBOSITY) |
| Loop over field entities in the problem. More...
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MoFEMErrorCode | loop_entities (const std::string problem_name, const std::string field_name, RowColData rc, EntityMethod &method, int verb=DEFAULT_VERBOSITY) |
| Loop over field entities in the problem. More...
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MoFEMErrorCode | loop_entities (const std::string field_name, EntityMethod &method, Range const *const ents=nullptr, int verb=DEFAULT_VERBOSITY) |
| Loop over field entities. More...
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MoFEMErrorCode | get_fields (const Field_multiIndex **fields_ptr) const |
| Get fields multi-index from database. More...
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MoFEMErrorCode | get_ref_ents (const RefEntity_multiIndex **refined_entities_ptr) const |
| Get ref entities multi-index from database. More...
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MoFEMErrorCode | get_ref_finite_elements (const RefElement_multiIndex **refined_finite_elements_ptr) const |
| Get ref finite elements multi-index form database. More...
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MoFEMErrorCode | get_finite_elements (const FiniteElement_multiIndex **fe_ptr) const |
| Get finite elements multi-index. More...
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MoFEMErrorCode | get_ents_finite_elements (const EntFiniteElement_multiIndex **fe_ent_ptr) const |
| Get entities finite elements multi-index. More...
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MoFEMErrorCode | get_field_ents (const FieldEntity_multiIndex **field_ents) const |
| Get field multi index. More...
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MoFEMErrorCode | get_dofs (const DofEntity_multiIndex **dofs_ptr) const |
| Get dofs multi index. More...
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MoFEMErrorCode | get_problem (const std::string &problem_name, const Problem **problem_ptr) const |
| Get problem database (data structure) More...
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MoFEMErrorCode | get_problems (const Problem_multiIndex **problems_ptr) const |
| Get pointer to problems multi-index. More...
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MoFEMErrorCode | get_ents_elements_adjacency (const FieldEntityEntFiniteElementAdjacencyMap_multiIndex **dofs_elements_adjacency) const |
| Get the dofs elements adjacency object. More...
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const Field_multiIndex * | get_fields () const |
| Get the fields object. More...
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const RefEntity_multiIndex * | get_ref_ents () const |
| Get the ref ents object. More...
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const RefElement_multiIndex * | get_ref_finite_elements () const |
| Get the ref finite elements object. More...
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const FiniteElement_multiIndex * | get_finite_elements () const |
| Get the finite elements object. More...
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const EntFiniteElement_multiIndex * | get_ents_finite_elements () const |
| Get the ents finite elements object. More...
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const FieldEntity_multiIndex * | get_field_ents () const |
| Get the field ents object. More...
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const DofEntity_multiIndex * | get_dofs () const |
| Get the dofs object. More...
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const Problem * | get_problem (const std::string problem_name) const |
| Get the problem object. More...
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const Problem_multiIndex * | get_problems () const |
| Get the problems object. More...
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const FieldEntityEntFiniteElementAdjacencyMap_multiIndex * | get_ents_elements_adjacency () const |
| Get the dofs elements adjacency object. More...
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FieldEntityByUId::iterator | get_ent_field_by_name_begin (const std::string &field_name) const |
| get begin iterator of field ents of given name (instead you can use IT_GET_ENT_FIELD_BY_NAME_FOR_LOOP(MFIELD,NAME,IT) More...
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FieldEntityByUId::iterator | get_ent_field_by_name_end (const std::string &field_name) const |
| get begin iterator of field dofs of given name (instead you can use IT_GET_ENT_FIELD_BY_NAME_FOR_LOOP(MFIELD,NAME,IT) More...
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DofEntityByUId::iterator | get_dofs_by_name_begin (const std::string &field_name) const |
| get begin iterator of field dofs of given name (instead you can use IT_GET_DOFS_FIELD_BY_NAME_FOR_LOOP(MFIELD,NAME,IT) More...
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DofEntityByUId::iterator | get_dofs_by_name_end (const std::string &field_name) const |
| get begin iterator of field dofs of given name (instead you can use IT_GET_DOFS_FIELD_BY_NAME_FOR_LOOP(MFIELD,NAME,IT) More...
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DofEntityByUId::iterator | get_dofs_by_name_and_ent_begin (const std::string &field_name, const EntityHandle ent) const |
| get begin iterator of field dofs of given name and ent(instead you can use IT_GET_DOFS_FIELD_BY_NAME_FOR_LOOP(MFIELD,NAME,ENT,IT) More...
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DofEntityByUId::iterator | get_dofs_by_name_and_ent_end (const std::string &field_name, const EntityHandle ent) const |
| get begin iterator of field dofs of given name and ent (instead you can use IT_GET_DOFS_FIELD_BY_NAME_FOR_LOOP(MFIELD,NAME,ENT,IT) More...
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DofEntityByUId::iterator | get_dofs_by_name_and_type_begin (const std::string &field_name, const EntityType type) const |
| get begin iterator of field dofs of given name and ent type (instead you can use IT_GET_DOFS_FIELD_BY_NAME_FOR_LOOP(MFIELD,NAME,TYPE,IT) More...
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DofEntityByUId::iterator | get_dofs_by_name_and_type_end (const std::string &field_name, const EntityType ent) const |
| get begin iterator of field dofs of given name end ent type(instead you can use IT_GET_DOFS_FIELD_BY_NAME_FOR_LOOP(MFIELD,NAME,TYPE,IT) More...
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EntFiniteElement_multiIndex::index< Unique_mi_tag >::type::iterator | get_fe_by_name_begin (const std::string &fe_name) const |
| get begin iterator of finite elements of given name (instead you can use IT_GET_FES_BY_NAME_FOR_LOOP(MFIELD,NAME,IT) More...
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EntFiniteElement_multiIndex::index< Unique_mi_tag >::type::iterator | get_fe_by_name_end (const std::string &fe_name) const |
| get end iterator of finite elements of given name (instead you can use IT_GET_FES_BY_NAME_FOR_LOOP(MFIELD,NAME,IT) More...
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MPI_Comm & | get_comm () const |
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int | get_comm_size () const |
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int | get_comm_rank () const |
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boost::shared_ptr< WrapMPIComm > | wrapMPIMOABComm |
| manage creation and destruction of MOAB communicator More...
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int | verbose |
| Verbosity level. More...
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boost::ptr_map< boost::typeindex::type_index, UnknownInterface > | iFaces |
| Hash map of pointers to interfaces. More...
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int * | buildMoFEM |
| keeps flags/semaphores for different stages More...
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std::string | optionsPrefix |
| Prefix for options on command line. More...
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PetscBool | initaliseAndBuildField |
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PetscBool | initaliseAndBuildFiniteElements |
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Tag | th_Part |
| Tag for partition number. More...
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Tag | th_RefParentHandle |
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Tag | th_RefBitLevel |
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Tag | th_RefBitLevel_Mask |
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Tag | th_RefBitEdge |
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Tag | th_RefFEMeshset |
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Tag | th_FieldId |
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Tag | th_FieldName |
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Tag | th_FieldName_DataNamePrefix |
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Tag | th_FieldSpace |
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Tag | th_FieldContinuity |
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Tag | th_FieldBase |
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Tag | th_FEId |
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Tag | th_FEName |
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Tag | th_FEIdCol |
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Tag | th_FEIdRow |
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Tag | th_FEIdData |
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Tag | th_ProblemId |
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Tag | th_ProblemName |
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Tag | th_ProblemFEId |
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Tag | th_ProblemNbDofsRow |
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Tag | th_ProblemNbDofsCol |
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Tag | th_ProblemLocalNbDofRow |
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Tag | th_ProblemGhostNbDofRow |
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Tag | th_ProblemLocalNbDofCol |
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Tag | th_ProblemGhostNbDofCol |
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Tag | th_ProblemShift |
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Tag | th_ElemType |
| Needed for VTK files. More...
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Tag | th_MoFEMBuild |
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boost::shared_ptr< BasicEntityData > | basicEntityDataPtr |
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RefEntity_multiIndex | refinedEntities |
| refined entities More...
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RefElement_multiIndex | refinedFiniteElements |
| refined elements More...
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Field_multiIndex | fIelds |
| fields More...
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FieldEntity_multiIndex | entsFields |
| entities on fields More...
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DofEntity_multiIndex | dofsField |
| dofs on fields More...
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FiniteElement_multiIndex | finiteElements |
| finite elements More...
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EntFiniteElement_multiIndex | entsFiniteElements |
| finite element entities More...
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FieldEntityEntFiniteElementAdjacencyMap_multiIndex | entFEAdjacencies |
| adjacencies of elements to dofs More...
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Problem_multiIndex | pRoblems |
| problems multi-index More...
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std::reference_wrapper< moab::Interface > | moab |
| moab database More...
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PetscLogEvent | MOFEM_EVENT_preProcess |
| Event for preProcess finite element. More...
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PetscLogEvent | MOFEM_EVENT_operator |
| Event for evaluating operator of finite element. More...
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PetscLogEvent | MOFEM_EVENT_postProcess |
| Event for postProcess finite element. More...
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PetscLogEvent | MOFEM_EVENT_createMat |
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MPI_Comm | mofemComm |
| MoFEM communicator. More...
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ParallelComm * | pComm |
| MOAB communicator structure. More...
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int | sIze |
| MoFEM communicator size. More...
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int | rAnk |
| MOFEM communicator rank. More...
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static bool | isGloballyInitialised = false |
| Core base globally initialized. More...
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static int | mpiInitialised |
| mpi was initialised by other agent More...
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static PetscBool | isInitialized |
| petsc was initialised by other agent More...
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