fix_file.cpp

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/** \file fix_file.cpp
  \brief Load and save file
*/
 
#include <MoFEM.hpp>
using namespace MoFEM;
 
static char help[] = "...\n\n";
 
int main(int argc, char *argv[]) {
 
  MoFEM::Core::Initialize(&argc, &argv, (char *)0, help);
 
  try {
    char mesh_file_name[255] = "in.h5m";
    char out_file_name[255] = "out.h5m";
    PetscBool out_flg_file = PETSC_FALSE;
    PetscOptionsBegin(PETSC_COMM_WORLD, "", "Fix file options", "none");
    CHKERR PetscOptionsString("-file_name", "mesh file name", "", "mesh.h5m",
                              mesh_file_name, 255, &out_flg_file);
    CHKERR PetscOptionsString("-out_file_name", "mesh file name", "",
                              "mesh.h5m", out_file_name, 255, &out_flg_file);
    PetscOptionsEnd();
 
    moab::Core mb_instance;
    moab::Interface &moab = mb_instance;
    const char *option;
    option = "";
 
    MOFEM_LOG("WORLD", Sev::inform)
        << "In " << mesh_file_name << " out " << out_file_name;
 
    CHKERR moab.load_file(mesh_file_name, 0, option);
    bool changes = false;
    CHKERR BitRefManager::fixTagSize(moab, &changes);
    if (changes)
      CHKERR moab.write_file(out_file_name);
  }
 
  CATCH_ERRORS;
 
  CHKERR MoFEM::Core::Finalize();
}