definitions.h File Reference

useful compiler derivatives and definitions More...

Go to the source code of this file.

Macros
#define	DEPRECATED
#define	MYPCOMM_INDEX   0
	default communicator number PCOMM
#define	MAX_CORE_TMP   1
	maximal number of cores
#define	BITREFEDGES_SIZE   32
	number refined edges
#define	BITREFLEVEL_SIZE   64
	max number of refinements
#define	BITFIELDID_SIZE   32
	max number of fields
#define	BITFEID_SIZE   32
	max number of finite elements
#define	BITPROBLEMID_SIZE   32
	max number of problems
#define	BITINTERFACEUID_SIZE   32
#define	MB_TYPE_WIDTH   4
#define	MB_ID_WIDTH   (8 * sizeof(EntityHandle) - MB_TYPE_WIDTH)
#define	MB_TYPE_MASK   ((EntityHandle)0xF << MB_ID_WIDTH)
#define	MB_START_ID   ((EntityID)1)
	All entity id's currently start at 1.
#define	MB_END_ID    ((EntityID)MB_ID_MASK)
	Last id is the complement of the MASK/*#end#*‍/.
#define	MB_ID_MASK   (~MB_TYPE_MASK)
#define	MAX_DOFS_ON_ENTITY   512
	Maximal number of DOFs on entity.
#define	MAX_PROCESSORS_NUMBER   1024
	Maximal number of processors.
#define	DOF_UID_MASK    (MAX_DOFS_ON_ENTITY - 1)
	Mask for DOF number on entity form UId/*#end#*‍/.
#define	ENTITY_UID_MASK   (~DOF_UID_MASK)
#define	NOT_USED(x)   ((void)(x))
#define	BARRIER_PCOMM_RANK_START(PCMB)
	set barrier start Run code in sequence, starting from process 0, and ends on last process.
#define	BARRIER_RANK_START(PCMB)
#define	BARRIER_PCOMM_RANK_END(PCMB)
	set barrier start Run code in sequence, starting from process 0, and ends on last process.
#define	BARRIER_RANK_END(PCMB)
#define	BARRIER_MOFEM_RANK_START(MOFEM)
	set barrier start Run code in sequence, starting from process 0, and ends on last process.
#define	BARRIER_MOFEM_RANK_END(MOFEM)
	set barrier start Run code in sequence, starting from process 0, and ends on last process.
#define	MoFEMFunctionBegin
	First executable line of each MoFEM function, used for error handling. Final line of MoFEM functions should be MoFEMFunctionReturn(0);.
#define	CATCH_ERRORS
	Catch errors.
#define	MoFEMFunctionReturn(a)
	Last executable line of each PETSc function used for error handling. Replaces return()
#define	MoFEMFunctionBeginHot   PetscFunctionBeginHot
	First executable line of each MoFEM function, used for error handling. Final line of MoFEM functions should be MoFEMFunctionReturn(0); Use of this function allows for lighter profiling by default.
#define	MoFEMFunctionReturnHot(a)   PetscFunctionReturn(a)
	Last executable line of each PETSc function used for error handling. Replaces return()
#define	CHKERRQ_PETSC(n)   CHKERRQ(n)
#define	CHKERRQ_MOAB(a)
	check error code of MoAB function
#define	CHKERRG(n)
	Check error code of MoFEM/MOAB/PETSc function.
#define	CHKERR   MoFEM::ErrorChecker<__LINE__>() <<
	Inline error check.
#define	MOAB_THROW(err)
	Check error code of MoAB function and throw MoFEM exception.
#define	THROW_MESSAGE(msg)
	Throw MoFEM exception.
#define	CHK_MOAB_THROW(err, msg)
	Check error code of MoAB function and throw MoFEM exception.
#define	CHK_THROW_MESSAGE(err, msg)
	Check and throw MoFEM exception.
#define	SSTR(x)   toString(x)
	Convert number to string.
#define	TENSOR1_VEC_PTR(VEC)   &VEC[0], &VEC[1], &VEC[2]
#define	SYMMETRIC_TENSOR4_MAT_PTR(MAT)
#define	TENSOR4_MAT_PTR(MAT)   &MAT(0, 0), MAT.size2()
#define	TENSOR2_MAT_PTR(MAT)
#define	SYMMETRIC_TENSOR2_MAT_PTR(MAT)    &MAT(0, 0), &MAT(0, 1), &MAT(0, 2), &MAT(0, 3), &MAT(0, 4), &MAT(0, 5)
#define	SYMMETRIC_TENSOR2_VEC_PTR(VEC)    &VEC[0], &VEC[1], &VEC[2], &VEC[3], &VEC[4], &VEC[5]

Enumerations
enum	MoFEMErrorCodes {   MOFEM_SUCCESS = 0 , MOFEM_DATA_INCONSISTENCY = 100 , MOFEM_NOT_IMPLEMENTED = 101 , MOFEM_NOT_FOUND = 102 ,   MOFEM_OPERATION_UNSUCCESSFUL = 103 , MOFEM_IMPOSSIBLE_CASE = 104 , MOFEM_INVALID_DATA = 105 , MOFEM_NOT_INSTALLED = 106 ,   MOFEM_MOFEMEXCEPTION_THROW = 107 , MOFEM_STD_EXCEPTION_THROW = 108 , MOFEM_ATOM_TEST_INVALID = 109 , MOFEM_MOAB_ERROR = 110 }
	Error handling. More...
enum	FieldApproximationBase {   NOBASE = 0 , AINSWORTH_LEGENDRE_BASE , AINSWORTH_LOBATTO_BASE , AINSWORTH_BERNSTEIN_BEZIER_BASE ,   DEMKOWICZ_JACOBI_BASE , USER_BASE , LASTBASE }
	approximation base More...
enum	FieldSpace {   NOSPACE = 0 , NOFIELD = 1 , H1 , HCURL ,   HDIV , L2 , LASTSPACE }
	approximation spaces More...
enum	FieldContinuity { CONTINUOUS = 0 , DISCONTINUOUS = 1 , LASTCONTINUITY }
	Field continuity. More...
enum	MoFEMTypes { MF_ZERO = 0 , MF_EXCL = 1 << 0 , MF_EXIST = 1 << 1 , MF_NOT_THROW = 1 << 2 }
	Those types control how functions respond on arguments, f.e. error handling. More...
enum	CoordinateTypes {   CARTESIAN , POLAR , CYLINDRICAL , SPHERICAL ,   LAST_COORDINATE_SYSTEM }
	Coodinate system. More...
enum	RowColData { ROW = 0 , COL , DATA , LASTROWCOLDATA }
	RowColData. More...
enum	ByWhat {   BYROW = 1 << 0 , BYCOL = 1 << 1 , BYDATA = 1 << 2 , BYROWDATA = 1 << 0 | 1 << 2 ,   BYCOLDATA = 1 << 1 | 1 << 2 , BYROWCOL = 1 << 0 | 1 << 1 , BYALL = 1 << 0 | 1 << 1 | 1 << 2 }
enum	CubitBC {   UNKNOWNSET = 0 , NODESET = 1 << 0 , SIDESET = 1 << 1 , BLOCKSET = 1 << 2 ,   MATERIALSET = 1 << 3 , DISPLACEMENTSET = 1 << 4 , FORCESET = 1 << 5 , PRESSURESET = 1 << 6 ,   VELOCITYSET = 1 << 7 , ACCELERATIONSET = 1 << 8 , TEMPERATURESET = 1 << 9 , HEATFLUXSET = 1 << 10 ,   INTERFACESET = 1 << 11 , UNKNOWNNAME = 1 << 12 , MAT_ELASTICSET = 1 << 13 , MAT_INTERFSET = 1 << 14 ,   MAT_THERMALSET = 1 << 15 , BODYFORCESSET = 1 << 16 , MAT_MOISTURESET = 1 << 17 , DIRICHLET_BC = 1 << 18 ,   NEUMANN_BC = 1 << 19 , LASTSET_BC = 1 << 20 }
	Types of sets and boundary conditions. More...
enum	HVecFormatting { HVEC0 = 0 , HVEC1 , HVEC2 }
	Format in rows of vectorial base functions. More...
enum	HVecDiffFormatting {   HVEC0_0 = 0 , HVEC1_0 , HVEC2_0 , HVEC0_1 ,   HVEC1_1 , HVEC2_1 , HVEC0_2 , HVEC1_2 ,   HVEC2_2 }
	Format in rows of vectorial base gradients of base functions. More...
enum	VERBOSITY_LEVELS {   DEFAULT_VERBOSITY = -1 , QUIET = 0 , VERBOSE , VERY_VERBOSE ,   NOISY , VERY_NOISY }
	Verbosity levels. More...

Functions
void	macro_is_deprecated_using_deprecated_function ()
	Is used to indicate that macro is deprecated Do nothing just triggers error at the compilation.

Variables
static const char *const	MoFEMErrorCodesNames []
static const char *const	ApproximationBaseNames []
static const char *const	FieldSpaceNames []
static const char *const	FieldContinuityNames []
static const char *const	CoordinateTypesNames []
	Coordinate system names.
static const char *const	CubitBCNames []
	Names of types of sets and boundary conditions.

Detailed Description

useful compiler derivatives and definitions

Definition in file definitions.h.

Macro Definition Documentation

BARRIER_MOFEM_RANK_END

#define BARRIER_MOFEM_RANK_END

(

MOFEM

)

Value:

  {                                                                            \
    for (int i = (MOFEM)->get_comm_rank(); i < (MOFEM)->get_comm_size(); i++)  \
      MPI_Barrier((MOFEM)->get_comm());                                        \
  };

set barrier start Run code in sequence, starting from process 0, and ends on last process.

It can be only used for testing. Do not use that function as a part of these code.

Definition at line 323 of file definitions.h.

  {                                                                            \
    for (int i = (MOFEM)->get_comm_rank(); i < (MOFEM)->get_comm_size(); i++)  \
      MPI_Barrier((MOFEM)->get_comm());                                        \
  };

BARRIER_MOFEM_RANK_START

#define BARRIER_MOFEM_RANK_START

(

MOFEM

)

Value:

  {                                                                            \
    for (int i = 0; i < (MOFEM)->get_comm_rank(); i++)                         \
      MPI_Barrier((MOFEM)->get_comm());                                        \
  };

set barrier start Run code in sequence, starting from process 0, and ends on last process.

It can be only used for testing. Do not use that function as a part of these code.

Definition at line 310 of file definitions.h.

  {                                                                            \
    for (int i = 0; i < (MOFEM)->get_comm_rank(); i++)                         \
      MPI_Barrier((MOFEM)->get_comm());                                        \
  };

BARRIER_PCOMM_RANK_END

#define BARRIER_PCOMM_RANK_END

(

PCMB

)

Value:

  {                                                                            \
    for (unsigned int i = PCMB->proc_config().proc_rank();                     \
         i < PCMB->proc_config().proc_size(); i++)                             \
      MPI_Barrier(PCMB->proc_config().proc_comm());                            \
  };

set barrier start Run code in sequence, starting from process 0, and ends on last process.

It can be only used for testing. Do not use that function as a part of these code.

Definition at line 286 of file definitions.h.

  {                                                                            \
    for (unsigned int i = PCMB->proc_config().proc_rank();                     \
         i < PCMB->proc_config().proc_size(); i++)                             \
      MPI_Barrier(PCMB->proc_config().proc_comm());                            \
  };

BARRIER_PCOMM_RANK_START

#define BARRIER_PCOMM_RANK_START

(

PCMB

)

Value:

  {                                                                            \
    for (unsigned int i = 0; i < PCMB->proc_config().proc_rank(); i++)         \
      MPI_Barrier(PCMB->proc_config().proc_comm());                            \
  };

set barrier start Run code in sequence, starting from process 0, and ends on last process.

It can be only used for testing. Do not use that function as a part of these code.

Definition at line 264 of file definitions.h.

  {                                                                            \
    for (unsigned int i = 0; i < PCMB->proc_config().proc_rank(); i++)         \
      MPI_Barrier(PCMB->proc_config().proc_comm());                            \
  };

BARRIER_RANK_END

#define BARRIER_RANK_END

(

PCMB

)

Value:

  {                                                                            \
    macro_is_deprecated_using_deprecated_function();                           \
    for (unsigned int i = PCMB->proc_config().proc_rank();                     \
         i < PCMB->proc_config().proc_size(); i++)                             \
      MPI_Barrier(PCMB->proc_config().proc_comm());                            \
  };

Deprecated:

Do use this macro, instead use BARRIER_PCOMM_RANK_START

Definition at line 295 of file definitions.h.

  {                                                                            \
    macro_is_deprecated_using_deprecated_function();                           \
    for (unsigned int i = PCMB->proc_config().proc_rank();                     \
         i < PCMB->proc_config().proc_size(); i++)                             \
      MPI_Barrier(PCMB->proc_config().proc_comm());                            \
  };

BARRIER_RANK_START

#define BARRIER_RANK_START

(

PCMB

)

Value:

  {                                                                            \
    macro_is_deprecated_using_deprecated_function();                           \
    for (unsigned int i = 0; i < PCMB->proc_config().proc_rank(); i++)         \
      MPI_Barrier(PCMB->proc_config().proc_comm());                            \
  };

Deprecated:

Do use this macro, instead use BARRIER_PCOMM_RANK_START

Definition at line 272 of file definitions.h.

  {                                                                            \
    macro_is_deprecated_using_deprecated_function();                           \
    for (unsigned int i = 0; i < PCMB->proc_config().proc_rank(); i++)         \
      MPI_Barrier(PCMB->proc_config().proc_comm());                            \
  };

BITFEID_SIZE

#define BITFEID_SIZE   32

max number of finite elements

Definition at line 234 of file definitions.h.

BITFIELDID_SIZE

#define BITFIELDID_SIZE   32

max number of fields

Definition at line 233 of file definitions.h.

BITINTERFACEUID_SIZE

#define BITINTERFACEUID_SIZE   32

Definition at line 236 of file definitions.h.

BITPROBLEMID_SIZE

#define BITPROBLEMID_SIZE   32

max number of problems

Definition at line 235 of file definitions.h.

BITREFEDGES_SIZE

#define BITREFEDGES_SIZE   32

number refined edges

Definition at line 231 of file definitions.h.

BITREFLEVEL_SIZE

#define BITREFLEVEL_SIZE   64

max number of refinements

Examples

mofem/atom_tests/hanging_node_approx.cpp, and mofem/tutorials/vec-5/free_surface.cpp.

Definition at line 232 of file definitions.h.

CATCH_ERRORS

#define CATCH_ERRORS

Catch errors.

Usage in main functions

int main(int argc, char *argv[]) {
 
MoFEM::Core::Initialize(&argc, &argv, (char *)0, help);
 
try {
 
// More code here
 
}
CATCH_ERRORS;
 
return MoFEM::Core::Finalize();
 
}

Examples

ep.cpp, mofem/atom_tests/add_blockset.cpp, mofem/atom_tests/add_cubit_meshsets.cpp, mofem/atom_tests/bernstein_bezier_generate_base.cpp, mofem/atom_tests/boundary_marker.cpp, mofem/atom_tests/build_composite_problem.cpp, mofem/atom_tests/build_large_problem.cpp, mofem/atom_tests/build_problems.cpp, mofem/atom_tests/child_and_parent.cpp, mofem/atom_tests/continuity_check_on_contact_prism_side_ele.cpp, mofem/atom_tests/continuity_check_on_skeleton_3d.cpp, mofem/atom_tests/continuity_check_on_skeleton_with_simple_2d_for_h1.cpp, mofem/atom_tests/continuity_check_on_skeleton_with_simple_2d_for_hcurl.cpp, mofem/atom_tests/continuity_check_on_skeleton_with_simple_2d_for_hdiv.cpp, mofem/atom_tests/cubit_bc_test.cpp, mofem/atom_tests/dg_projection.cpp, mofem/atom_tests/dm_build_partitioned_mesh.cpp, mofem/atom_tests/dm_create_subdm.cpp, mofem/atom_tests/dm_partitioned_no_field.cpp, mofem/atom_tests/edge_and_bubble_shape_functions_on_quad.cpp, mofem/atom_tests/field_blas.cpp, mofem/atom_tests/field_blas_axpy.cpp, mofem/atom_tests/field_evaluator.cpp, mofem/atom_tests/find_local_coordinates.cpp, mofem/atom_tests/forces_and_sources_testing_edge_element.cpp, mofem/atom_tests/forces_and_sources_testing_flat_prism_element.cpp, mofem/atom_tests/forces_and_sources_testing_users_base.cpp, mofem/atom_tests/gauss_points_on_outer_product.cpp, mofem/atom_tests/hanging_node_approx.cpp, mofem/atom_tests/hcurl_check_approx_in_2d.cpp, mofem/atom_tests/hcurl_curl_operator.cpp, mofem/atom_tests/hcurl_divergence_operator_2d.cpp, mofem/atom_tests/hdiv_check_approx_in_3d.cpp, mofem/atom_tests/hdiv_divergence_operator.cpp, mofem/atom_tests/higher_derivatives.cpp, mofem/atom_tests/log.cpp, mofem/atom_tests/loop_entities.cpp, mofem/atom_tests/matrix_function.cpp, mofem/atom_tests/mesh_insert_interface_atom.cpp, mofem/atom_tests/node_merge.cpp, mofem/atom_tests/operators_tests.cpp, mofem/atom_tests/partition_mesh.cpp, mofem/atom_tests/petsc_smart_ptr_objects.cpp, mofem/atom_tests/prism_elements_from_surface.cpp, mofem/atom_tests/prism_polynomial_approximation.cpp, mofem/atom_tests/quad_polynomial_approximation.cpp, mofem/atom_tests/remove_entities_from_problem.cpp, mofem/atom_tests/remove_entities_from_problem_not_partitioned.cpp, mofem/atom_tests/scalar_check_approximation.cpp, mofem/atom_tests/schur_test_diag_mat.cpp, mofem/atom_tests/simple_interface.cpp, mofem/atom_tests/simple_l2_only.cpp, mofem/atom_tests/tensor_divergence_operator.cpp, mofem/atom_tests/test_broken_space.cpp, mofem/atom_tests/test_cache_on_entities.cpp, mofem/tools/delete_ho_nodes.cpp, mofem/tools/extrude_prisms.cpp, mofem/tools/field_to_vertices.cpp, mofem/tools/mesh_cut.cpp, mofem/tools/mesh_smoothing.cpp, mofem/tools/meshset_to_vtk.cpp, mofem/tools/remove_mofem_meshsets.cpp, mofem/tools/split_sideset.cpp, mofem/tutorials/adv-0/plastic.cpp, mofem/tutorials/adv-2/thermo_elastic.cpp, mofem/tutorials/adv-3/level_set.cpp, mofem/tutorials/adv-4/dynamic_first_order_con_law.cpp, mofem/tutorials/adv-5/seepage.cpp, mofem/tutorials/clx-0/helmholtz.cpp, mofem/tutorials/cor-0to1/unsaturated_transport.cpp, mofem/tutorials/cor-10/navier_stokes.cpp, mofem/tutorials/cor-2to5/analytical_nonlinear_poisson.cpp, mofem/tutorials/cor-2to5/analytical_poisson.cpp, mofem/tutorials/cor-2to5/analytical_poisson_field_split.cpp, mofem/tutorials/cor-6/simple_elasticity.cpp, mofem/tutorials/cor-7/elasticity_mixed_formulation.cpp, mofem/tutorials/cor-9/reaction_diffusion.cpp, mofem/tutorials/fun-0/hello_world.cpp, mofem/tutorials/fun-1/integration.cpp, mofem/tutorials/fun-2/plot_base.cpp, mofem/tutorials/max-0/magnetostatic.cpp, mofem/tutorials/max-1/lorentz_force.cpp, mofem/tutorials/mix-0/mixed_poisson.cpp, mofem/tutorials/mix-1/phase.cpp, mofem/tutorials/scl-0/approximaton.cpp, mofem/tutorials/scl-1/poisson_2d_homogeneous.cpp, mofem/tutorials/scl-10/initial_diffusion.cpp, mofem/tutorials/scl-10/photon_diffusion.cpp, mofem/tutorials/scl-11/poisson_2d_dis_galerkin.cpp, mofem/tutorials/scl-12/electrostatics.cpp, mofem/tutorials/scl-6/heat_equation.cpp, mofem/tutorials/scl-7/wave_equation.cpp, mofem/tutorials/scl-8/radiation.cpp, mofem/tutorials/scl-9/heat_method.cpp, mofem/tutorials/vec-0/elastic.cpp, mofem/tutorials/vec-1/eigen_elastic.cpp, mofem/tutorials/vec-10/schur_elastic.cpp, mofem/tutorials/vec-2/nonlinear_elastic.cpp, mofem/tutorials/vec-3/nonlinear_dynamic_elastic.cpp, mofem/tutorials/vec-4/approx_sphere.cpp, mofem/tutorials/vec-4/shallow_wave.cpp, mofem/tutorials/vec-5/free_surface.cpp, mofem/tutorials/vec-6/plate.cpp, mofem/tutorials/vec-7/adjoint.cpp, mofem/tutorials/vec-9/arc_length.cpp, mofem/users_modules/adolc-plasticity/adolc_plasticity.cpp, mofem/users_modules/basic_finite_elements/atom_tests/testing_jacobian_of_hook_element.cpp, mofem/users_modules/basic_finite_elements/atom_tests/testing_jacobian_of_hook_scaled_with_density_element.cpp, mofem/users_modules/basic_finite_elements/elasticity/elasticity.cpp, mofem/users_modules/basic_finite_elements/nonlinear_elasticity/nonlinear_dynamics.cpp, mofem/users_modules/bone_remodelling/bone_adaptation.cpp, mofem/users_modules/eshelbian_plasticity/ep.cpp, and mofem/users_modules/minimal_surface_equation/minimal_surface_area.cpp.

Definition at line 385 of file definitions.h.

                                          {                                    \
    return PetscError(PETSC_COMM_SELF, ex.lINE, PETSC_FUNCTION_NAME, __FILE__, \
                      ex.errorCode, PETSC_ERROR_INITIAL, "%s", ex.what());     \
  }                                                                            \
  catch (MoFEMExceptionRepeat const &ex) {                                     \
    return PetscError(PETSC_COMM_SELF, ex.lINE, PETSC_FUNCTION_NAME, __FILE__, \
                      ex.errorCode, PETSC_ERROR_REPEAT, "%s", " ");            \
  }                                                                            \
  catch (MoFEMException const &ex) {                                           \
    SETERRQ(PETSC_COMM_SELF, ex.errorCode, "%s", ex.errorMessage);             \
  }                                                                            \
  catch (boost::bad_weak_ptr & ex) {                                           \
    std::string message("Boost bad weak ptr: " + std::string(ex.what()) +      \
                        " at " + boost::lexical_cast<std::string>(__LINE__) +  \
                        " : " + std::string(__FILE__) + " in " +               \
                        std::string(PETSC_FUNCTION_NAME));                     \
    SETERRQ(PETSC_COMM_SELF, MOFEM_STD_EXCEPTION_THROW, "%s",                  \
            message.c_str());                                                  \
  }                                                                            \
  catch (std::out_of_range & ex) {                                             \
    std::string message("Std out of range error: " + std::string(ex.what()) +  \
                        " at " + boost::lexical_cast<std::string>(__LINE__) +  \
                        " : " + std::string(__FILE__) + " in " +               \
                        std::string(PETSC_FUNCTION_NAME));                     \
    SETERRQ(PETSC_COMM_SELF, MOFEM_STD_EXCEPTION_THROW, "%s",                  \
            message.c_str());                                                  \
  }                                                                            \
  catch (std::exception const &ex) {                                           \
    std::string message("Std error: " + std::string(ex.what()) + " at " +      \
                        boost::lexical_cast<std::string>(__LINE__) + " : " +   \
                        std::string(__FILE__) + " in " +                       \
                        std::string(PETSC_FUNCTION_NAME));                     \
    SETERRQ(PETSC_COMM_SELF, MOFEM_STD_EXCEPTION_THROW, "%s",                  \
            message.c_str());                                                  \
  }

CHK_MOAB_THROW

#define CHK_MOAB_THROW	(		err,
			msg
	)

Value:

  {                                                                          \
    if (PetscUnlikely(static_cast<int>(MB_SUCCESS) != (err)))                \
    {                                                                        \
      std::string str;                                                       \
      throw MoFEMException(                                                  \
          MOFEM_MOAB_ERROR,                                                  \
          ("MOAB error (" + boost::lexical_cast<std::string>((err)) + ") " + \
           boost::lexical_cast<std::string>((msg)) + " at line " +           \
           boost::lexical_cast<std::string>(__LINE__) + " : " +              \
           std::string(__FILE__))                                            \
              .c_str());                                                     \
    }                                                                        \
  }

Check error code of MoAB function and throw MoFEM exception.

Parameters

err	MoABErrorCode
msg	error message

Examples

mofem/atom_tests/schur_test_diag_mat.cpp, mofem/tutorials/adv-0/plastic.cpp, mofem/tutorials/adv-1/src/ContactOps.hpp, mofem/tutorials/adv-2/thermo_elastic.cpp, mofem/tutorials/adv-3/level_set.cpp, mofem/tutorials/vec-5/free_surface.cpp, mofem/tutorials/vec-7/adjoint.cpp, mofem/users_modules/eshelbian_plasticity/src/impl/EshelbianOperators.cpp, and mofem/users_modules/eshelbian_plasticity/src/impl/EshelbianPlasticity.cpp.

Definition at line 592 of file definitions.h.

  {                                                                          \
    if (PetscUnlikely(static_cast<int>(MB_SUCCESS) != (err)))                \
    {                                                                        \
      std::string str;                                                       \
      throw MoFEMException(                                                  \
          MOFEM_MOAB_ERROR,                                                  \
          ("MOAB error (" + boost::lexical_cast<std::string>((err)) + ") " + \
           boost::lexical_cast<std::string>((msg)) + " at line " +           \
           boost::lexical_cast<std::string>(__LINE__) + " : " +              \
           std::string(__FILE__))                                            \
              .c_str());                                                     \
    }                                                                        \
  }

CHK_THROW_MESSAGE

#define CHK_THROW_MESSAGE	(		err,
			msg
	)

Value:

  {                                                                            \
    if (PetscUnlikely((err) != MOFEM_SUCCESS))                                 \
      THROW_MESSAGE(msg);                                                      \
  }

Check and throw MoFEM exception.

Parameters

err	error code
msg	message

Examples

mofem/atom_tests/dm_partitioned_no_field.cpp, mofem/atom_tests/test_broken_space.cpp, mofem/tutorials/adv-0/plastic.cpp, mofem/tutorials/adv-0/src/PlasticOps.hpp, mofem/tutorials/adv-1/src/ContactOps.hpp, mofem/tutorials/adv-2/thermo_elastic.cpp, mofem/tutorials/adv-3/level_set.cpp, mofem/tutorials/adv-5/seepage.cpp, mofem/tutorials/scl-1/poisson_2d_homogeneous.cpp, mofem/tutorials/scl-12/electrostatics.cpp, mofem/tutorials/vec-10/schur_elastic.cpp, mofem/tutorials/vec-2/src/HenckyOps.hpp, mofem/tutorials/vec-3/nonlinear_dynamic_elastic.cpp, mofem/tutorials/vec-5/free_surface.cpp, mofem/tutorials/vec-7/adjoint.cpp, mofem/tutorials/vec-9/arc_length.cpp, mofem/users_modules/adolc-plasticity/adolc_plasticity.cpp, mofem/users_modules/adolc-plasticity/src/ADOLCPlasticity.hpp, mofem/users_modules/adolc-plasticity/src/ADOLCPlasticityMaterialModels.hpp, mofem/users_modules/basic_finite_elements/nonlinear_elasticity/nonlinear_dynamics.cpp, mofem/users_modules/eshelbian_plasticity/src/impl/EshelbianOperators.cpp, and mofem/users_modules/eshelbian_plasticity/src/impl/EshelbianPlasticity.cpp.

Definition at line 612 of file definitions.h.

  {                                                                            \
    if (PetscUnlikely((err) != MOFEM_SUCCESS))                                 \
      THROW_MESSAGE(msg);                                                      \
  }

CHKERR

#define CHKERR   MoFEM::ErrorChecker<__LINE__>() <<

Inline error check.

MoFEMErrorCode foo() {
  MoFEMFunctionBegin;
 
  // Call other functions
  CHKERR fun_moab();
  CHKERR fun_petsc();
  CHKERR fun_mofem();
 
  // Throw error
  SETERRQ(PETSC_COMM_WORLD, MOFEM_DATA_INCONSISTENCY, "Some error message");
 
  MoFEMFunctionReturn(0);
}
 
int main(int argc, char *argv[]) {
 
// Initailise MoFEM and Petsc
MoFEM::Core::Initialize(&argc, &argv, (char *)0, help);
 
try {
 
  moab::Core mb_instance; // MoAB database
  moab::Interface &moab = mb_instance;
  MoFEM::Core core(moab); // MOFEM database
  MoFEM::CoreInterface &m_field = core;
 
  CHKERR foo(); // Call function
 
}
CATCH_ERRORS;
 
return MoFEM::Core::Finalize();
 
}

Examples

ep.cpp, mofem/atom_tests/add_blockset.cpp, mofem/atom_tests/add_cubit_meshsets.cpp, mofem/atom_tests/bernstein_bezier_generate_base.cpp, mofem/atom_tests/boundary_marker.cpp, mofem/atom_tests/build_composite_problem.cpp, mofem/atom_tests/build_large_problem.cpp, mofem/atom_tests/build_problems.cpp, mofem/atom_tests/child_and_parent.cpp, mofem/atom_tests/continuity_check_on_contact_prism_side_ele.cpp, mofem/atom_tests/continuity_check_on_skeleton_3d.cpp, mofem/atom_tests/continuity_check_on_skeleton_with_simple_2d_for_h1.cpp, mofem/atom_tests/continuity_check_on_skeleton_with_simple_2d_for_hcurl.cpp, mofem/atom_tests/continuity_check_on_skeleton_with_simple_2d_for_hdiv.cpp, mofem/atom_tests/cubit_bc_test.cpp, mofem/atom_tests/dg_projection.cpp, mofem/atom_tests/dm_build_partitioned_mesh.cpp, mofem/atom_tests/dm_create_subdm.cpp, mofem/atom_tests/dm_partitioned_no_field.cpp, mofem/atom_tests/edge_and_bubble_shape_functions_on_quad.cpp, mofem/atom_tests/field_blas.cpp, mofem/atom_tests/field_blas_axpy.cpp, mofem/atom_tests/field_evaluator.cpp, mofem/atom_tests/find_local_coordinates.cpp, mofem/atom_tests/forces_and_sources_testing_edge_element.cpp, mofem/atom_tests/forces_and_sources_testing_flat_prism_element.cpp, mofem/atom_tests/forces_and_sources_testing_users_base.cpp, mofem/atom_tests/gauss_points_on_outer_product.cpp, mofem/atom_tests/hanging_node_approx.cpp, mofem/atom_tests/hcurl_check_approx_in_2d.cpp, mofem/atom_tests/hcurl_curl_operator.cpp, mofem/atom_tests/hcurl_divergence_operator_2d.cpp, mofem/atom_tests/hdiv_check_approx_in_3d.cpp, mofem/atom_tests/hdiv_divergence_operator.cpp, mofem/atom_tests/higher_derivatives.cpp, mofem/atom_tests/log.cpp, mofem/atom_tests/loop_entities.cpp, mofem/atom_tests/matrix_function.cpp, mofem/atom_tests/mesh_insert_interface_atom.cpp, mofem/atom_tests/node_merge.cpp, mofem/atom_tests/operators_tests.cpp, mofem/atom_tests/partition_mesh.cpp, mofem/atom_tests/petsc_smart_ptr_objects.cpp, mofem/atom_tests/prism_elements_from_surface.cpp, mofem/atom_tests/prism_polynomial_approximation.cpp, mofem/atom_tests/quad_polynomial_approximation.cpp, mofem/atom_tests/remove_entities_from_problem.cpp, mofem/atom_tests/remove_entities_from_problem_not_partitioned.cpp, mofem/atom_tests/scalar_check_approximation.cpp, mofem/atom_tests/schur_test_diag_mat.cpp, mofem/atom_tests/simple_interface.cpp, mofem/atom_tests/simple_l2_only.cpp, mofem/atom_tests/tensor_divergence_operator.cpp, mofem/atom_tests/test_broken_space.cpp, mofem/atom_tests/test_cache_on_entities.cpp, mofem/tools/delete_ho_nodes.cpp, mofem/tools/extrude_prisms.cpp, mofem/tools/field_to_vertices.cpp, mofem/tools/mesh_cut.cpp, mofem/tools/mesh_smoothing.cpp, mofem/tools/meshset_to_vtk.cpp, mofem/tools/remove_mofem_meshsets.cpp, mofem/tools/split_sideset.cpp, mofem/tutorials/adv-0/plastic.cpp, mofem/tutorials/adv-0/src/PlasticOps.hpp, mofem/tutorials/adv-0/src/PlasticOpsMonitor.hpp, mofem/tutorials/adv-1/src/ContactOps.hpp, mofem/tutorials/adv-2/src/ThermoElasticOps.hpp, mofem/tutorials/adv-2/thermo_elastic.cpp, mofem/tutorials/adv-3/level_set.cpp, mofem/tutorials/adv-4/dynamic_first_order_con_law.cpp, mofem/tutorials/adv-5/seepage.cpp, mofem/tutorials/clx-0/helmholtz.cpp, mofem/tutorials/cor-0to1/src/UnsaturatedFlow.hpp, mofem/tutorials/cor-0to1/unsaturated_transport.cpp, mofem/tutorials/cor-10/navier_stokes.cpp, mofem/tutorials/cor-2to5/analytical_nonlinear_poisson.cpp, mofem/tutorials/cor-2to5/analytical_poisson.cpp, mofem/tutorials/cor-2to5/analytical_poisson_field_split.cpp, mofem/tutorials/cor-2to5/src/AuxPoissonFunctions.hpp, mofem/tutorials/cor-2to5/src/PoissonOperators.hpp, mofem/tutorials/cor-6/simple_elasticity.cpp, mofem/tutorials/cor-7/elasticity_mixed_formulation.cpp, mofem/tutorials/cor-7/src/ElasticityMixedFormulation.hpp, mofem/tutorials/cor-9/reaction_diffusion.cpp, mofem/tutorials/fun-0/hello_world.cpp, mofem/tutorials/fun-1/integration.cpp, mofem/tutorials/fun-2/plot_base.cpp, mofem/tutorials/max-0/magnetostatic.cpp, mofem/tutorials/max-0/src/MagneticElement.hpp, mofem/tutorials/max-1/lorentz_force.cpp, mofem/tutorials/mix-0/mixed_poisson.cpp, mofem/tutorials/mix-1/phase.cpp, mofem/tutorials/scl-0/approximaton.cpp, mofem/tutorials/scl-1/poisson_2d_homogeneous.cpp, mofem/tutorials/scl-10/initial_diffusion.cpp, mofem/tutorials/scl-10/photon_diffusion.cpp, mofem/tutorials/scl-11/poisson_2d_dis_galerkin.cpp, mofem/tutorials/scl-11/src/PoissonDiscontinousGalerkin.hpp, mofem/tutorials/scl-12/electrostatics.cpp, mofem/tutorials/scl-6/heat_equation.cpp, mofem/tutorials/scl-7/wave_equation.cpp, mofem/tutorials/scl-8/radiation.cpp, mofem/tutorials/scl-9/heat_method.cpp, mofem/tutorials/vec-0/elastic.cpp, mofem/tutorials/vec-1/eigen_elastic.cpp, mofem/tutorials/vec-10/schur_elastic.cpp, mofem/tutorials/vec-2/nonlinear_elastic.cpp, mofem/tutorials/vec-2/src/HenckyOps.hpp, mofem/tutorials/vec-2/src/NonlinearElasticExample.hpp, mofem/tutorials/vec-3/nonlinear_dynamic_elastic.cpp, mofem/tutorials/vec-4/approx_sphere.cpp, mofem/tutorials/vec-4/shallow_wave.cpp, mofem/tutorials/vec-5/free_surface.cpp, mofem/tutorials/vec-6/plate.cpp, mofem/tutorials/vec-7/adjoint.cpp, mofem/tutorials/vec-9/arc_length.cpp, mofem/tutorials/vec-9/src/ArcLengthExample.hpp, mofem/users_modules/adolc-plasticity/adolc_plasticity.cpp, mofem/users_modules/adolc-plasticity/src/ADOLCPlasticity.hpp, mofem/users_modules/adolc-plasticity/src/ADOLCPlasticityLargeStrain.hpp, mofem/users_modules/adolc-plasticity/src/ADOLCPlasticityMaterialModels.hpp, mofem/users_modules/basic_finite_elements/atom_tests/testing_jacobian_of_hook_element.cpp, mofem/users_modules/basic_finite_elements/atom_tests/testing_jacobian_of_hook_scaled_with_density_element.cpp, mofem/users_modules/basic_finite_elements/elasticity/elasticity.cpp, mofem/users_modules/basic_finite_elements/nonlinear_elastic_materials/src/NeoHookean.hpp, mofem/users_modules/basic_finite_elements/nonlinear_elastic_materials/src/NonlinearElasticElementInterface.hpp, mofem/users_modules/basic_finite_elements/nonlinear_elasticity/nonlinear_dynamics.cpp, mofem/users_modules/basic_finite_elements/src/HookeElement.hpp, mofem/users_modules/basic_finite_elements/src/NavierStokesElement.hpp, mofem/users_modules/basic_finite_elements/src/impl/HookeElement.cpp, mofem/users_modules/basic_finite_elements/src/impl/NavierStokesElement.cpp, mofem/users_modules/bone_remodelling/bone_adaptation.cpp, mofem/users_modules/bone_remodelling/src/Remodeling.hpp, mofem/users_modules/bone_remodelling/src/impl/Remodeling.cpp, mofem/users_modules/eshelbian_plasticity/ep.cpp, mofem/users_modules/eshelbian_plasticity/src/impl/EshelbianOperators.cpp, mofem/users_modules/eshelbian_plasticity/src/impl/EshelbianPlasticity.cpp, and mofem/users_modules/minimal_surface_equation/minimal_surface_area.cpp.

Definition at line 551 of file definitions.h.

CHKERRG

#define CHKERRG

(

n

)

Value:

  if ((boost::is_same<BOOST_TYPEOF((n)),                                       \
                      MoFEMErrorCodeGeneric<PetscErrorCode>>::value)) {        \
    CHKERRQ_PETSC((n));                                                        \
  } else if (boost::is_same<BOOST_TYPEOF((n)),                                 \
                            MoFEMErrorCodeGeneric<moab::ErrorCode>>::value) {  \
    CHKERRQ_MOAB((n));                                                         \
  }

Check error code of MoFEM/MOAB/PETSc function.

Parameters

a	MoFEMErrorCode

MoFEMErrorCode fun() {
MoFEMFunctionBeginHot;
rval = fun_moab(); CHKERRG(rval);
ierr = fun_petsc(); CHKERRG(ierr);
merr = fun_mofem(); CHKERRG(merr);
MoFEMFunctionReturnHot(0);

Note

Function detect type of errocode using specialized template function getErrorType, i.e. condition is evaluated at compilation time.

Examples

mofem/tutorials/cor-0to1/unsaturated_transport.cpp.

Definition at line 499 of file definitions.h.

                                                                    {        \
    CHKERRQ_PETSC((n));                                                        \
  } else if (boost::is_same<BOOST_TYPEOF((n)),                                 \
                            MoFEMErrorCodeGeneric<moab::ErrorCode>>::value) {  \
    CHKERRQ_MOAB((n));                                                         \
  }

CHKERRQ_MOAB

#define CHKERRQ_MOAB

(

a

)

Value:

  if (PetscUnlikely(MB_SUCCESS != (a))) {                                      \
    std::string error_str = (unsigned)(a) <= (unsigned)MB_FAILURE              \
                                ? moab::ErrorCodeStr[a]                        \
                                : "INVALID ERROR CODE";                        \
    std::string str("MOAB error (" + boost::lexical_cast<std::string>((a)) +   \
                    ") " + error_str + " at line " +                           \
                    boost::lexical_cast<std::string>(__LINE__) + " : " +       \
                    std::string(__FILE__));                                    \
    SETERRQ(PETSC_COMM_SELF, MOFEM_MOAB_ERROR, "%s", str.c_str());             \
  }

check error code of MoAB function

Parameters

a	MoABErrorCode

Definition at line 470 of file definitions.h.

                                        {                                      \
    std::string error_str = (unsigned)(a) <= (unsigned)MB_FAILURE              \
                                ? moab::ErrorCodeStr[a]                        \
                                : "INVALID ERROR CODE";                        \
    std::string str("MOAB error (" + boost::lexical_cast<std::string>((a)) +   \
                    ") " + error_str + " at line " +                           \
                    boost::lexical_cast<std::string>(__LINE__) + " : " +       \
                    std::string(__FILE__));                                    \
    SETERRQ(PETSC_COMM_SELF, MOFEM_MOAB_ERROR, "%s", str.c_str());             \
  }

CHKERRQ_PETSC

#define CHKERRQ_PETSC

(

n

)

CHKERRQ(n)

Definition at line 465 of file definitions.h.

DEPRECATED

#define DEPRECATED

Examples

mofem/tutorials/adv-0/src/PlasticOpsGeneric.hpp, and mofem/tutorials/adv-2/src/ThermoElasticOps.hpp.

Definition at line 17 of file definitions.h.

DOF_UID_MASK

#define DOF_UID_MASK    (MAX_DOFS_ON_ENTITY - 1)

Mask for DOF number on entity form UId/*#end#*‍/.

Definition at line 252 of file definitions.h.

ENTITY_UID_MASK

#define ENTITY_UID_MASK   (~DOF_UID_MASK)

Definition at line 253 of file definitions.h.

MAX_CORE_TMP

#define MAX_CORE_TMP   1

maximal number of cores

Definition at line 230 of file definitions.h.

MAX_DOFS_ON_ENTITY

#define MAX_DOFS_ON_ENTITY   512

Maximal number of DOFs on entity.

Examples

mofem/atom_tests/remove_entities_from_problem.cpp, mofem/atom_tests/tensor_divergence_operator.cpp, and mofem/tutorials/adv-3/level_set.cpp.

Definition at line 249 of file definitions.h.

MAX_PROCESSORS_NUMBER

#define MAX_PROCESSORS_NUMBER   1024

Maximal number of processors.

Definition at line 250 of file definitions.h.

MB_END_ID

#define MB_END_ID    ((EntityID)MB_ID_MASK)

Last id is the complement of the MASK/*#end#*‍/.

Definition at line 246 of file definitions.h.

MB_ID_MASK

#define MB_ID_MASK   (~MB_TYPE_MASK)

Definition at line 247 of file definitions.h.

MB_ID_WIDTH

#define MB_ID_WIDTH   (8 * sizeof(EntityHandle) - MB_TYPE_WIDTH)

Definition at line 240 of file definitions.h.

MB_START_ID

#define MB_START_ID   ((EntityID)1)

All entity id's currently start at 1.

Definition at line 244 of file definitions.h.

MB_TYPE_MASK

#define MB_TYPE_MASK   ((EntityHandle)0xF << MB_ID_WIDTH)

Definition at line 241 of file definitions.h.

MB_TYPE_WIDTH

#define MB_TYPE_WIDTH   4

Definition at line 239 of file definitions.h.

MOAB_THROW

#define MOAB_THROW

(

err

)

Value:

  {                                                                            \
    if (PetscUnlikely(MB_SUCCESS != (err))) {                                  \
      std::string error_str = (unsigned)(err) <= (unsigned)MB_FAILURE          \
                                  ? moab::ErrorCodeStr[err]                    \
                                  : "INVALID ERROR CODE";                      \
      throw MoFEMException(MOFEM_MOAB_ERROR,                                   \
                           ("MOAB error (" +                                   \
                            boost::lexical_cast<std::string>((err)) + ") " +   \
                            error_str + " at line " +                          \
                            boost::lexical_cast<std::string>(__LINE__) +       \
                            " : " + std::string(__FILE__))                     \
                               .c_str());                                      \
    }                                                                          \
  }

Check error code of MoAB function and throw MoFEM exception.

Parameters

err	MoABErrorCode

Examples

mofem/tutorials/mix-1/phase.cpp, mofem/tutorials/vec-6/plate.cpp, and mofem/users_modules/basic_finite_elements/nonlinear_elasticity/nonlinear_dynamics.cpp.

Definition at line 557 of file definitions.h.

  {                                                                            \
    if (PetscUnlikely(MB_SUCCESS != (err))) {                                  \
      std::string error_str = (unsigned)(err) <= (unsigned)MB_FAILURE          \
                                  ? moab::ErrorCodeStr[err]                    \
                                  : "INVALID ERROR CODE";                      \
      throw MoFEMException(MOFEM_MOAB_ERROR,                                   \
                           ("MOAB error (" +                                   \
                            boost::lexical_cast<std::string>((err)) + ") " +   \
                            error_str + " at line " +                          \
                            boost::lexical_cast<std::string>(__LINE__) +       \
                            " : " + std::string(__FILE__))                     \
                               .c_str());                                      \
    }                                                                          \
  }

MoFEMFunctionBegin

#define MoFEMFunctionBegin

Value:

  PetscFunctionBeginUser;                                                      \
  try {

First executable line of each MoFEM function, used for error handling. Final line of MoFEM functions should be MoFEMFunctionReturn(0);.

\node Not collective

Example

PetscErrorCode fun()  {
 int something;
 MoFEMFunctionBegin;
 MoFEMFunctionReturn(0);
}

Examples

mofem/atom_tests/add_blockset.cpp, mofem/atom_tests/bernstein_bezier_generate_base.cpp, mofem/atom_tests/boundary_marker.cpp, mofem/atom_tests/build_large_problem.cpp, mofem/atom_tests/child_and_parent.cpp, mofem/atom_tests/continuity_check_on_contact_prism_side_ele.cpp, mofem/atom_tests/continuity_check_on_skeleton_3d.cpp, mofem/atom_tests/continuity_check_on_skeleton_with_simple_2d_for_h1.cpp, mofem/atom_tests/continuity_check_on_skeleton_with_simple_2d_for_hcurl.cpp, mofem/atom_tests/continuity_check_on_skeleton_with_simple_2d_for_hdiv.cpp, mofem/atom_tests/dg_projection.cpp, mofem/atom_tests/dm_build_partitioned_mesh.cpp, mofem/atom_tests/dm_partitioned_no_field.cpp, mofem/atom_tests/field_blas.cpp, mofem/atom_tests/field_blas_axpy.cpp, mofem/atom_tests/field_evaluator.cpp, mofem/atom_tests/find_local_coordinates.cpp, mofem/atom_tests/forces_and_sources_testing_edge_element.cpp, mofem/atom_tests/forces_and_sources_testing_users_base.cpp, mofem/atom_tests/gauss_points_on_outer_product.cpp, mofem/atom_tests/hanging_node_approx.cpp, mofem/atom_tests/hcurl_check_approx_in_2d.cpp, mofem/atom_tests/hcurl_curl_operator.cpp, mofem/atom_tests/hcurl_divergence_operator_2d.cpp, mofem/atom_tests/hdiv_check_approx_in_3d.cpp, mofem/atom_tests/hdiv_divergence_operator.cpp, mofem/atom_tests/higher_derivatives.cpp, mofem/atom_tests/log.cpp, mofem/atom_tests/loop_entities.cpp, mofem/atom_tests/operators_tests.cpp, mofem/atom_tests/petsc_smart_ptr_objects.cpp, mofem/atom_tests/prism_elements_from_surface.cpp, mofem/atom_tests/prism_polynomial_approximation.cpp, mofem/atom_tests/quad_polynomial_approximation.cpp, mofem/atom_tests/remove_entities_from_problem.cpp, mofem/atom_tests/remove_entities_from_problem_not_partitioned.cpp, mofem/atom_tests/scalar_check_approximation.cpp, mofem/atom_tests/schur_test_diag_mat.cpp, mofem/atom_tests/simple_interface.cpp, mofem/atom_tests/simple_l2_only.cpp, mofem/atom_tests/tensor_divergence_operator.cpp, mofem/atom_tests/test_broken_space.cpp, mofem/atom_tests/test_cache_on_entities.cpp, mofem/tools/mesh_cut.cpp, mofem/tools/mesh_smoothing.cpp, mofem/tools/split_sideset.cpp, mofem/tutorials/adv-0/plastic.cpp, mofem/tutorials/adv-0/src/PlasticOps.hpp, mofem/tutorials/adv-0/src/PlasticOpsGeneric.hpp, mofem/tutorials/adv-0/src/PlasticOpsLargeStrains.hpp, mofem/tutorials/adv-0/src/PlasticOpsMonitor.hpp, mofem/tutorials/adv-0/src/PlasticOpsSmallStrains.hpp, mofem/tutorials/adv-1/src/ContactOps.hpp, mofem/tutorials/adv-2/src/ThermoElasticOps.hpp, mofem/tutorials/adv-2/thermo_elastic.cpp, mofem/tutorials/adv-3/level_set.cpp, mofem/tutorials/adv-4/dynamic_first_order_con_law.cpp, mofem/tutorials/adv-5/seepage.cpp, mofem/tutorials/adv-5/src/SeepageOps.hpp, mofem/tutorials/clx-0/helmholtz.cpp, mofem/tutorials/cor-0to1/src/UnsaturatedFlow.hpp, mofem/tutorials/cor-10/navier_stokes.cpp, mofem/tutorials/cor-2to5/analytical_poisson_field_split.cpp, mofem/tutorials/cor-2to5/src/AuxPoissonFunctions.hpp, mofem/tutorials/cor-2to5/src/PoissonOperators.hpp, mofem/tutorials/cor-6/simple_elasticity.cpp, mofem/tutorials/cor-7/src/ElasticityMixedFormulation.hpp, mofem/tutorials/cor-9/reaction_diffusion.cpp, mofem/tutorials/fun-1/integration.cpp, mofem/tutorials/fun-2/plot_base.cpp, mofem/tutorials/max-0/src/MagneticElement.hpp, mofem/tutorials/max-1/lorentz_force.cpp, mofem/tutorials/mix-0/mixed_poisson.cpp, mofem/tutorials/mix-1/phase.cpp, mofem/tutorials/scl-0/approximaton.cpp, mofem/tutorials/scl-1/poisson_2d_homogeneous.cpp, mofem/tutorials/scl-1/src/poisson_2d_homogeneous.hpp, mofem/tutorials/scl-10/initial_diffusion.cpp, mofem/tutorials/scl-10/photon_diffusion.cpp, mofem/tutorials/scl-11/poisson_2d_dis_galerkin.cpp, mofem/tutorials/scl-11/src/PoissonDiscontinousGalerkin.hpp, mofem/tutorials/scl-12/electrostatics.cpp, mofem/tutorials/scl-6/heat_equation.cpp, mofem/tutorials/scl-7/wave_equation.cpp, mofem/tutorials/scl-8/radiation.cpp, mofem/tutorials/scl-9/heat_method.cpp, mofem/tutorials/vec-1/eigen_elastic.cpp, mofem/tutorials/vec-10/schur_elastic.cpp, mofem/tutorials/vec-2/src/HenckyOps.hpp, mofem/tutorials/vec-2/src/NonlinearElasticExample.hpp, mofem/tutorials/vec-3/nonlinear_dynamic_elastic.cpp, mofem/tutorials/vec-4/approx_sphere.cpp, mofem/tutorials/vec-4/shallow_wave.cpp, mofem/tutorials/vec-5/free_surface.cpp, mofem/tutorials/vec-6/plate.cpp, mofem/tutorials/vec-7/adjoint.cpp, mofem/tutorials/vec-9/src/ArcLengthExample.hpp, mofem/users_modules/adolc-plasticity/adolc_plasticity.cpp, mofem/users_modules/adolc-plasticity/src/ADOLCPlasticity.hpp, mofem/users_modules/adolc-plasticity/src/ADOLCPlasticityLargeStrain.hpp, mofem/users_modules/adolc-plasticity/src/ADOLCPlasticityMaterialModels.hpp, mofem/users_modules/basic_finite_elements/atom_tests/testing_jacobian_of_hook_scaled_with_density_element.cpp, mofem/users_modules/basic_finite_elements/elasticity/elasticity.cpp, mofem/users_modules/basic_finite_elements/nonlinear_elastic_materials/src/NeoHookean.hpp, mofem/users_modules/basic_finite_elements/nonlinear_elastic_materials/src/NonlinearElasticElementInterface.hpp, mofem/users_modules/basic_finite_elements/nonlinear_elasticity/nonlinear_dynamics.cpp, mofem/users_modules/basic_finite_elements/src/HookeElement.hpp, mofem/users_modules/basic_finite_elements/src/NavierStokesElement.hpp, mofem/users_modules/basic_finite_elements/src/impl/HookeElement.cpp, mofem/users_modules/basic_finite_elements/src/impl/NavierStokesElement.cpp, mofem/users_modules/bone_remodelling/src/Remodeling.hpp, mofem/users_modules/bone_remodelling/src/impl/Remodeling.cpp, mofem/users_modules/eshelbian_plasticity/src/impl/EshelbianOperators.cpp, and mofem/users_modules/eshelbian_plasticity/src/impl/EshelbianPlasticity.cpp.

Definition at line 359 of file definitions.h.

      {

MoFEMFunctionBeginHot

#define MoFEMFunctionBeginHot   PetscFunctionBeginHot

First executable line of each MoFEM function, used for error handling. Final line of MoFEM functions should be MoFEMFunctionReturn(0); Use of this function allows for lighter profiling by default.

\node Not collective

Example:

PetscErrorCode fun()  {
int something;
MoFEMFunctionBeginHot;
 
// some work here
 
MoFEMFunctionReturnHot(0);
}

Examples

mofem/atom_tests/continuity_check_on_contact_prism_side_ele.cpp, mofem/atom_tests/continuity_check_on_skeleton_3d.cpp, mofem/atom_tests/continuity_check_on_skeleton_with_simple_2d_for_h1.cpp, mofem/atom_tests/continuity_check_on_skeleton_with_simple_2d_for_hcurl.cpp, mofem/atom_tests/continuity_check_on_skeleton_with_simple_2d_for_hdiv.cpp, mofem/atom_tests/field_blas.cpp, mofem/atom_tests/field_blas_axpy.cpp, mofem/atom_tests/forces_and_sources_testing_flat_prism_element.cpp, mofem/atom_tests/forces_and_sources_testing_users_base.cpp, mofem/atom_tests/hanging_node_approx.cpp, mofem/atom_tests/hdiv_divergence_operator.cpp, mofem/atom_tests/loop_entities.cpp, mofem/atom_tests/simple_interface.cpp, mofem/tools/mesh_smoothing.cpp, mofem/tutorials/adv-0/plastic.cpp, mofem/tutorials/adv-2/thermo_elastic.cpp, mofem/tutorials/adv-5/seepage.cpp, mofem/tutorials/fun-1/integration.cpp, mofem/tutorials/fun-2/plot_base.cpp, mofem/tutorials/scl-11/src/PoissonDiscontinousGalerkin.hpp, mofem/tutorials/scl-6/heat_equation.cpp, mofem/tutorials/scl-7/wave_equation.cpp, mofem/tutorials/scl-8/radiation.cpp, mofem/tutorials/vec-2/src/NonlinearElasticExample.hpp, mofem/tutorials/vec-4/approx_sphere.cpp, mofem/tutorials/vec-4/shallow_wave.cpp, mofem/tutorials/vec-6/plate.cpp, mofem/tutorials/vec-7/adjoint.cpp, mofem/tutorials/vec-9/src/ArcLengthExample.hpp, mofem/users_modules/adolc-plasticity/adolc_plasticity.cpp, mofem/users_modules/basic_finite_elements/atom_tests/testing_jacobian_of_hook_scaled_with_density_element.cpp, mofem/users_modules/basic_finite_elements/nonlinear_elastic_materials/src/NeoHookean.hpp, mofem/users_modules/basic_finite_elements/nonlinear_elastic_materials/src/NonlinearElasticElementInterface.hpp, mofem/users_modules/basic_finite_elements/nonlinear_elasticity/nonlinear_dynamics.cpp, mofem/users_modules/basic_finite_elements/src/impl/HookeElement.cpp, mofem/users_modules/bone_remodelling/src/Remodeling.hpp, mofem/users_modules/bone_remodelling/src/impl/Remodeling.cpp, mofem/users_modules/eshelbian_plasticity/src/impl/EshelbianOperators.cpp, and mofem/users_modules/eshelbian_plasticity/src/impl/EshelbianPlasticity.cpp.

Definition at line 456 of file definitions.h.

MoFEMFunctionReturn

#define MoFEMFunctionReturn

(

a

)

Value:

  }                                                                            \
  CATCH_ERRORS                                                                 \
  PetscFunctionReturn(a)

Last executable line of each PETSc function used for error handling. Replaces return()

Parameters

a	error code

Note

MoFEMFunctionReturn has to be used with MoFEMFunctionBegin and can be used only at the end of the function. If is need to return function in earlier use MoFEMFunctionReturnHot

Examples

mofem/atom_tests/add_blockset.cpp, mofem/atom_tests/bernstein_bezier_generate_base.cpp, mofem/atom_tests/boundary_marker.cpp, mofem/atom_tests/build_large_problem.cpp, mofem/atom_tests/child_and_parent.cpp, mofem/atom_tests/continuity_check_on_contact_prism_side_ele.cpp, mofem/atom_tests/continuity_check_on_skeleton_3d.cpp, mofem/atom_tests/continuity_check_on_skeleton_with_simple_2d_for_h1.cpp, mofem/atom_tests/continuity_check_on_skeleton_with_simple_2d_for_hcurl.cpp, mofem/atom_tests/continuity_check_on_skeleton_with_simple_2d_for_hdiv.cpp, mofem/atom_tests/dg_projection.cpp, mofem/atom_tests/dm_build_partitioned_mesh.cpp, mofem/atom_tests/dm_partitioned_no_field.cpp, mofem/atom_tests/field_blas.cpp, mofem/atom_tests/field_blas_axpy.cpp, mofem/atom_tests/field_evaluator.cpp, mofem/atom_tests/find_local_coordinates.cpp, mofem/atom_tests/forces_and_sources_testing_edge_element.cpp, mofem/atom_tests/forces_and_sources_testing_users_base.cpp, mofem/atom_tests/gauss_points_on_outer_product.cpp, mofem/atom_tests/hanging_node_approx.cpp, mofem/atom_tests/hcurl_check_approx_in_2d.cpp, mofem/atom_tests/hcurl_curl_operator.cpp, mofem/atom_tests/hcurl_divergence_operator_2d.cpp, mofem/atom_tests/hdiv_check_approx_in_3d.cpp, mofem/atom_tests/hdiv_divergence_operator.cpp, mofem/atom_tests/higher_derivatives.cpp, mofem/atom_tests/log.cpp, mofem/atom_tests/loop_entities.cpp, mofem/atom_tests/operators_tests.cpp, mofem/atom_tests/petsc_smart_ptr_objects.cpp, mofem/atom_tests/prism_elements_from_surface.cpp, mofem/atom_tests/prism_polynomial_approximation.cpp, mofem/atom_tests/quad_polynomial_approximation.cpp, mofem/atom_tests/remove_entities_from_problem.cpp, mofem/atom_tests/remove_entities_from_problem_not_partitioned.cpp, mofem/atom_tests/scalar_check_approximation.cpp, mofem/atom_tests/schur_test_diag_mat.cpp, mofem/atom_tests/simple_interface.cpp, mofem/atom_tests/simple_l2_only.cpp, mofem/atom_tests/tensor_divergence_operator.cpp, mofem/atom_tests/test_broken_space.cpp, mofem/atom_tests/test_cache_on_entities.cpp, mofem/tools/mesh_cut.cpp, mofem/tools/mesh_smoothing.cpp, mofem/tools/split_sideset.cpp, mofem/tutorials/adv-0/plastic.cpp, mofem/tutorials/adv-0/src/PlasticOps.hpp, mofem/tutorials/adv-0/src/PlasticOpsGeneric.hpp, mofem/tutorials/adv-0/src/PlasticOpsLargeStrains.hpp, mofem/tutorials/adv-0/src/PlasticOpsMonitor.hpp, mofem/tutorials/adv-0/src/PlasticOpsSmallStrains.hpp, mofem/tutorials/adv-1/src/ContactOps.hpp, mofem/tutorials/adv-2/src/ThermoElasticOps.hpp, mofem/tutorials/adv-2/thermo_elastic.cpp, mofem/tutorials/adv-3/level_set.cpp, mofem/tutorials/adv-4/dynamic_first_order_con_law.cpp, mofem/tutorials/adv-5/seepage.cpp, mofem/tutorials/adv-5/src/SeepageOps.hpp, mofem/tutorials/clx-0/helmholtz.cpp, mofem/tutorials/cor-0to1/src/UnsaturatedFlow.hpp, mofem/tutorials/cor-10/navier_stokes.cpp, mofem/tutorials/cor-2to5/analytical_poisson_field_split.cpp, mofem/tutorials/cor-2to5/src/AuxPoissonFunctions.hpp, mofem/tutorials/cor-2to5/src/PoissonOperators.hpp, mofem/tutorials/cor-6/simple_elasticity.cpp, mofem/tutorials/cor-7/src/ElasticityMixedFormulation.hpp, mofem/tutorials/cor-9/reaction_diffusion.cpp, mofem/tutorials/fun-0/hello_world.cpp, mofem/tutorials/fun-1/integration.cpp, mofem/tutorials/fun-2/plot_base.cpp, mofem/tutorials/max-0/src/MagneticElement.hpp, mofem/tutorials/max-1/lorentz_force.cpp, mofem/tutorials/mix-0/mixed_poisson.cpp, mofem/tutorials/mix-1/phase.cpp, mofem/tutorials/scl-0/approximaton.cpp, mofem/tutorials/scl-1/poisson_2d_homogeneous.cpp, mofem/tutorials/scl-1/src/poisson_2d_homogeneous.hpp, mofem/tutorials/scl-10/initial_diffusion.cpp, mofem/tutorials/scl-10/photon_diffusion.cpp, mofem/tutorials/scl-11/poisson_2d_dis_galerkin.cpp, mofem/tutorials/scl-11/src/PoissonDiscontinousGalerkin.hpp, mofem/tutorials/scl-12/electrostatics.cpp, mofem/tutorials/scl-6/heat_equation.cpp, mofem/tutorials/scl-7/wave_equation.cpp, mofem/tutorials/scl-8/radiation.cpp, mofem/tutorials/scl-9/heat_method.cpp, mofem/tutorials/vec-1/eigen_elastic.cpp, mofem/tutorials/vec-10/schur_elastic.cpp, mofem/tutorials/vec-2/src/HenckyOps.hpp, mofem/tutorials/vec-2/src/NonlinearElasticExample.hpp, mofem/tutorials/vec-3/nonlinear_dynamic_elastic.cpp, mofem/tutorials/vec-4/approx_sphere.cpp, mofem/tutorials/vec-4/shallow_wave.cpp, mofem/tutorials/vec-5/free_surface.cpp, mofem/tutorials/vec-6/plate.cpp, mofem/tutorials/vec-7/adjoint.cpp, mofem/tutorials/vec-9/src/ArcLengthExample.hpp, mofem/users_modules/adolc-plasticity/adolc_plasticity.cpp, mofem/users_modules/adolc-plasticity/src/ADOLCPlasticity.hpp, mofem/users_modules/adolc-plasticity/src/ADOLCPlasticityLargeStrain.hpp, mofem/users_modules/adolc-plasticity/src/ADOLCPlasticityMaterialModels.hpp, mofem/users_modules/basic_finite_elements/atom_tests/testing_jacobian_of_hook_scaled_with_density_element.cpp, mofem/users_modules/basic_finite_elements/elasticity/elasticity.cpp, mofem/users_modules/basic_finite_elements/nonlinear_elastic_materials/src/NeoHookean.hpp, mofem/users_modules/basic_finite_elements/nonlinear_elastic_materials/src/NonlinearElasticElementInterface.hpp, mofem/users_modules/basic_finite_elements/nonlinear_elasticity/nonlinear_dynamics.cpp, mofem/users_modules/basic_finite_elements/src/HookeElement.hpp, mofem/users_modules/basic_finite_elements/src/NavierStokesElement.hpp, mofem/users_modules/basic_finite_elements/src/impl/HookeElement.cpp, mofem/users_modules/basic_finite_elements/src/impl/NavierStokesElement.cpp, mofem/users_modules/bone_remodelling/src/Remodeling.hpp, mofem/users_modules/bone_remodelling/src/impl/Remodeling.cpp, mofem/users_modules/eshelbian_plasticity/src/impl/EshelbianOperators.cpp, and mofem/users_modules/eshelbian_plasticity/src/impl/EshelbianPlasticity.cpp.

Definition at line 432 of file definitions.h.

MoFEMFunctionReturnHot

#define MoFEMFunctionReturnHot

(

a

)

PetscFunctionReturn(a)

Last executable line of each PETSc function used for error handling. Replaces return()

Parameters

a	error code

Examples

mofem/atom_tests/boundary_marker.cpp, mofem/atom_tests/continuity_check_on_contact_prism_side_ele.cpp, mofem/atom_tests/continuity_check_on_skeleton_3d.cpp, mofem/atom_tests/continuity_check_on_skeleton_with_simple_2d_for_h1.cpp, mofem/atom_tests/continuity_check_on_skeleton_with_simple_2d_for_hcurl.cpp, mofem/atom_tests/continuity_check_on_skeleton_with_simple_2d_for_hdiv.cpp, mofem/atom_tests/field_blas.cpp, mofem/atom_tests/field_blas_axpy.cpp, mofem/atom_tests/forces_and_sources_testing_flat_prism_element.cpp, mofem/atom_tests/forces_and_sources_testing_users_base.cpp, mofem/atom_tests/hanging_node_approx.cpp, mofem/atom_tests/hcurl_curl_operator.cpp, mofem/atom_tests/hcurl_divergence_operator_2d.cpp, mofem/atom_tests/hdiv_divergence_operator.cpp, mofem/atom_tests/loop_entities.cpp, mofem/atom_tests/prism_elements_from_surface.cpp, mofem/atom_tests/simple_interface.cpp, mofem/tools/mesh_smoothing.cpp, mofem/tutorials/adv-0/plastic.cpp, mofem/tutorials/adv-0/src/PlasticOps.hpp, mofem/tutorials/adv-2/thermo_elastic.cpp, mofem/tutorials/adv-5/seepage.cpp, mofem/tutorials/cor-0to1/src/UnsaturatedFlow.hpp, mofem/tutorials/cor-2to5/analytical_poisson_field_split.cpp, mofem/tutorials/cor-2to5/src/PoissonOperators.hpp, mofem/tutorials/cor-6/simple_elasticity.cpp, mofem/tutorials/cor-7/src/ElasticityMixedFormulation.hpp, mofem/tutorials/fun-1/integration.cpp, mofem/tutorials/fun-2/plot_base.cpp, mofem/tutorials/max-0/src/MagneticElement.hpp, mofem/tutorials/scl-10/photon_diffusion.cpp, mofem/tutorials/scl-11/src/PoissonDiscontinousGalerkin.hpp, mofem/tutorials/scl-6/heat_equation.cpp, mofem/tutorials/scl-7/wave_equation.cpp, mofem/tutorials/scl-8/radiation.cpp, mofem/tutorials/vec-2/src/HenckyOps.hpp, mofem/tutorials/vec-2/src/NonlinearElasticExample.hpp, mofem/tutorials/vec-3/nonlinear_dynamic_elastic.cpp, mofem/tutorials/vec-4/approx_sphere.cpp, mofem/tutorials/vec-4/shallow_wave.cpp, mofem/tutorials/vec-6/plate.cpp, mofem/tutorials/vec-7/adjoint.cpp, mofem/tutorials/vec-9/src/ArcLengthExample.hpp, mofem/users_modules/adolc-plasticity/adolc_plasticity.cpp, mofem/users_modules/adolc-plasticity/src/ADOLCPlasticityMaterialModels.hpp, mofem/users_modules/basic_finite_elements/atom_tests/testing_jacobian_of_hook_scaled_with_density_element.cpp, mofem/users_modules/basic_finite_elements/nonlinear_elastic_materials/src/NeoHookean.hpp, mofem/users_modules/basic_finite_elements/nonlinear_elastic_materials/src/NonlinearElasticElementInterface.hpp, mofem/users_modules/basic_finite_elements/nonlinear_elasticity/nonlinear_dynamics.cpp, mofem/users_modules/basic_finite_elements/src/HookeElement.hpp, mofem/users_modules/basic_finite_elements/src/impl/HookeElement.cpp, mofem/users_modules/basic_finite_elements/src/impl/NavierStokesElement.cpp, mofem/users_modules/bone_remodelling/src/Remodeling.hpp, mofem/users_modules/bone_remodelling/src/impl/Remodeling.cpp, mofem/users_modules/eshelbian_plasticity/src/impl/EshelbianOperators.cpp, and mofem/users_modules/eshelbian_plasticity/src/impl/EshelbianPlasticity.cpp.

Definition at line 463 of file definitions.h.

MYPCOMM_INDEX

#define MYPCOMM_INDEX   0

default communicator number PCOMM

Examples

ep.cpp, mofem/atom_tests/build_composite_problem.cpp, mofem/atom_tests/dm_build_partitioned_mesh.cpp, mofem/atom_tests/dm_create_subdm.cpp, mofem/atom_tests/dm_partitioned_no_field.cpp, mofem/atom_tests/hanging_node_approx.cpp, mofem/atom_tests/prism_polynomial_approximation.cpp, mofem/atom_tests/remove_entities_from_problem.cpp, mofem/atom_tests/tensor_divergence_operator.cpp, mofem/atom_tests/test_cache_on_entities.cpp, mofem/tools/delete_ho_nodes.cpp, mofem/tools/extrude_prisms.cpp, mofem/tools/field_to_vertices.cpp, mofem/tools/mesh_cut.cpp, mofem/tools/meshset_to_vtk.cpp, mofem/tools/remove_mofem_meshsets.cpp, mofem/tools/split_sideset.cpp, mofem/tutorials/adv-0/plastic.cpp, mofem/tutorials/adv-2/thermo_elastic.cpp, mofem/tutorials/adv-3/level_set.cpp, mofem/tutorials/adv-5/seepage.cpp, mofem/tutorials/cor-0to1/unsaturated_transport.cpp, mofem/tutorials/cor-7/elasticity_mixed_formulation.cpp, mofem/tutorials/cor-9/reaction_diffusion.cpp, mofem/tutorials/fun-2/plot_base.cpp, mofem/tutorials/max-0/magnetostatic.cpp, mofem/tutorials/max-0/src/MagneticElement.hpp, mofem/tutorials/max-1/lorentz_force.cpp, mofem/tutorials/mix-0/mixed_poisson.cpp, mofem/tutorials/mix-1/phase.cpp, mofem/tutorials/scl-12/electrostatics.cpp, mofem/tutorials/vec-5/free_surface.cpp, mofem/tutorials/vec-7/adjoint.cpp, mofem/users_modules/adolc-plasticity/adolc_plasticity.cpp, mofem/users_modules/basic_finite_elements/elasticity/elasticity.cpp, mofem/users_modules/basic_finite_elements/nonlinear_elasticity/nonlinear_dynamics.cpp, mofem/users_modules/bone_remodelling/bone_adaptation.cpp, mofem/users_modules/eshelbian_plasticity/ep.cpp, mofem/users_modules/eshelbian_plasticity/src/impl/EshelbianPlasticity.cpp, and mofem/users_modules/minimal_surface_equation/minimal_surface_area.cpp.

Definition at line 228 of file definitions.h.

NOT_USED

#define NOT_USED

(

x

)

((void)(x))

Definition at line 255 of file definitions.h.

SSTR

#define SSTR

(

x

)

toString(x)

Convert number to string.

Parameters

x

number

Definition at line 622 of file definitions.h.

SYMMETRIC_TENSOR2_MAT_PTR

#define SYMMETRIC_TENSOR2_MAT_PTR

(

MAT

)

&MAT(0, 0), &MAT(0, 1), &MAT(0, 2), &MAT(0, 3), &MAT(0, 4), &MAT(0, 5)

Examples

mofem/users_modules/bone_remodelling/src/impl/Remodeling.cpp.

Definition at line 640 of file definitions.h.

SYMMETRIC_TENSOR2_VEC_PTR

#define SYMMETRIC_TENSOR2_VEC_PTR

(

VEC

)

&VEC[0], &VEC[1], &VEC[2], &VEC[3], &VEC[4], &VEC[5]

Examples

mofem/users_modules/bone_remodelling/src/impl/Remodeling.cpp.

Definition at line 643 of file definitions.h.

SYMMETRIC_TENSOR4_MAT_PTR

#define SYMMETRIC_TENSOR4_MAT_PTR

(

MAT

)

Value:

  &MAT(0, 0), &MAT(0, 1), &MAT(0, 2), &MAT(0, 3), &MAT(0, 4), &MAT(0, 5),      \
      &MAT(1, 0), &MAT(1, 1), &MAT(1, 2), &MAT(1, 3), &MAT(1, 4), &MAT(1, 5),  \
      &MAT(2, 0), &MAT(2, 1), &MAT(2, 2), &MAT(2, 3), &MAT(2, 4), &MAT(2, 5),  \
      &MAT(3, 0), &MAT(3, 1), &MAT(3, 2), &MAT(3, 3), &MAT(3, 4), &MAT(3, 5),  \
      &MAT(4, 0), &MAT(4, 1), &MAT(4, 2), &MAT(4, 3), &MAT(4, 4), &MAT(4, 5),  \
      &MAT(5, 0), &MAT(5, 1), &MAT(5, 2), &MAT(5, 3), &MAT(5, 4), &MAT(5, 5)

Examples

mofem/users_modules/bone_remodelling/src/impl/Remodeling.cpp.

Definition at line 626 of file definitions.h.

TENSOR1_VEC_PTR

#define TENSOR1_VEC_PTR

(

VEC

)

&VEC[0], &VEC[1], &VEC[2]

Definition at line 624 of file definitions.h.

TENSOR2_MAT_PTR

#define TENSOR2_MAT_PTR

(

MAT

)

Value:

  &MAT(0, 0), &MAT(1, 0), &MAT(2, 0), &MAT(3, 0), &MAT(4, 0), &MAT(5, 0),      \
      &MAT(6, 0), &MAT(7, 0), &MAT(8, 0)

Examples

mofem/users_modules/bone_remodelling/src/impl/Remodeling.cpp.

Definition at line 636 of file definitions.h.

TENSOR4_MAT_PTR

#define TENSOR4_MAT_PTR

(

MAT

)

&MAT(0, 0), MAT.size2()

Examples

mofem/users_modules/bone_remodelling/src/impl/Remodeling.cpp.

Definition at line 634 of file definitions.h.

THROW_MESSAGE

#define THROW_MESSAGE

(

msg

)

Value:

  {                                                                            \
    throw MoFEM::MoFEMException(                                               \
        MOFEM_MOFEMEXCEPTION_THROW,                                            \
        ("MoFEM error " + boost::lexical_cast<std::string>((msg)) +            \
         " at line " + boost::lexical_cast<std::string>(__LINE__) + " : " +    \
         std::string(__FILE__))                                                \
            .c_str());                                                         \
  }

Throw MoFEM exception.

Parameters

msg

message

Examples

mofem/atom_tests/matrix_function.cpp, and mofem/tutorials/mix-1/phase.cpp.

Definition at line 577 of file definitions.h.

  {                                                                            \
    throw MoFEM::MoFEMException(                                               \
        MOFEM_MOFEMEXCEPTION_THROW,                                            \
        ("MoFEM error " + boost::lexical_cast<std::string>((msg)) +            \
         " at line " + boost::lexical_cast<std::string>(__LINE__) + " : " +    \
         std::string(__FILE__))                                                \
            .c_str());                                                         \
  }

Enumeration Type Documentation

ByWhat

enum ByWhat

Controls adjency multi_index container (e.g. BYROW is adjacenciecy by field on on rows), see MoFEM::FieldEntityEntFiniteElementAdjacencyMap

Enumerator
BYROW
BYCOL
BYDATA
BYROWDATA
BYCOLDATA
BYROWCOL
BYALL

Definition at line 143 of file definitions.h.

            {
  BYROW = 1 << 0,
  BYCOL = 1 << 1,
  BYDATA = 1 << 2,
  BYROWDATA = 1 << 0 | 1 << 2,
  BYCOLDATA = 1 << 1 | 1 << 2,
  BYROWCOL = 1 << 0 | 1 << 1,
  BYALL = 1 << 0 | 1 << 1 | 1 << 2
};

CoordinateTypes

enum CoordinateTypes

Coodinate system.

Enumerator
CARTESIAN
POLAR
CYLINDRICAL
SPHERICAL
LAST_COORDINATE_SYSTEM

Definition at line 127 of file definitions.h.

                     {
  CARTESIAN,
  POLAR,
  CYLINDRICAL,
  SPHERICAL,
  LAST_COORDINATE_SYSTEM
};

CubitBC

enum CubitBC

Types of sets and boundary conditions.

Enumerator
UNKNOWNSET
NODESET
SIDESET
BLOCKSET
MATERIALSET
DISPLACEMENTSET
FORCESET
PRESSURESET
VELOCITYSET
ACCELERATIONSET
TEMPERATURESET
HEATFLUXSET
INTERFACESET
UNKNOWNNAME
MAT_ELASTICSET	block name is "MAT_ELASTIC"
MAT_INTERFSET
MAT_THERMALSET	block name is "MAT_THERMAL"
BODYFORCESSET	block name is "BODY_FORCES"
MAT_MOISTURESET	block name is "MAT_MOISTURE"
DIRICHLET_BC
NEUMANN_BC
LASTSET_BC

Definition at line 157 of file definitions.h.

             {
  UNKNOWNSET = 0,
  NODESET = 1 << 0,
  SIDESET = 1 << 1,
  BLOCKSET = 1 << 2,
  MATERIALSET = 1 << 3,
  DISPLACEMENTSET = 1 << 4,
  FORCESET = 1 << 5,
  PRESSURESET = 1 << 6,
  VELOCITYSET = 1 << 7,
  ACCELERATIONSET = 1 << 8,
  TEMPERATURESET = 1 << 9,
  HEATFLUXSET = 1 << 10,
  INTERFACESET = 1 << 11,
  UNKNOWNNAME = 1 << 12,
  MAT_ELASTICSET = 1 << 13, ///< block name is "MAT_ELASTIC"
  MAT_INTERFSET = 1 << 14,
  MAT_THERMALSET = 1 << 15,  ///< block name is "MAT_THERMAL"
  BODYFORCESSET = 1 << 16,   ///< block name is "BODY_FORCES"
  MAT_MOISTURESET = 1 << 17, ///< block name is "MAT_MOISTURE"
  DIRICHLET_BC = 1 << 18,
  NEUMANN_BC = 1 << 19,
  LASTSET_BC = 1 << 20
};

FieldApproximationBase

enum FieldApproximationBase

approximation base

Enumerator
NOBASE
AINSWORTH_LEGENDRE_BASE	Ainsworth Cole (Legendre) approx. base [1].
AINSWORTH_LOBATTO_BASE	Like AINSWORTH_LEGENDRE_BASE but with Lobatto base instead Legendre [11]
AINSWORTH_BERNSTEIN_BEZIER_BASE	See [3] and [2]
DEMKOWICZ_JACOBI_BASE	Construction of base is by Demkowicz [25]
USER_BASE	user implemented approximation base
LASTBASE

Definition at line 58 of file definitions.h.

                            {
  NOBASE = 0,
  AINSWORTH_LEGENDRE_BASE =
      1, ///< Ainsworth Cole (Legendre) approx. base \cite NME:NME847
  AINSWORTH_LOBATTO_BASE, ///< Like AINSWORTH_LEGENDRE_BASE but with Lobatto
                          ///< base instead Legendre \cite beriot2015efficient
  AINSWORTH_BERNSTEIN_BEZIER_BASE, ///< See \cite ainsworth2011bernstein and
                                   ///< \cite ainsworth2018bernstein
  DEMKOWICZ_JACOBI_BASE, ///< Construction of base is by Demkowicz \cite
                         ///< fuentes2015orientation
  USER_BASE,             ///< user implemented approximation base
  LASTBASE
};

FieldContinuity

enum FieldContinuity

Field continuity.

Enumerator
CONTINUOUS	Regular field.
DISCONTINUOUS	Broken continuity (No effect on L2 space)
LASTCONTINUITY

Definition at line 99 of file definitions.h.

                     {
  CONTINUOUS = 0,    ///< Regular field
  DISCONTINUOUS = 1, ///< Broken continuity (No effect on L2 space)
  LASTCONTINUITY
};

FieldSpace

enum FieldSpace

approximation spaces

Enumerator
NOSPACE
NOFIELD	scalar or vector of scalars describe (no true field)
H1	continuous field
HCURL	field with continuous tangents
HDIV	field with continuous normal traction
L2	field with C-1 continuity
LASTSPACE	FieldSpace in [ 0, LASTSPACE )

Definition at line 82 of file definitions.h.

                {
  NOSPACE = 0,
  NOFIELD = 1, ///< scalar or vector of scalars describe (no true field)
  H1,          ///< continuous field
  HCURL,       ///< field with continuous tangents
  HDIV,        ///< field with continuous normal traction
  L2,          ///< field with C-1 continuity
  LASTSPACE    ///< FieldSpace in [ 0, LASTSPACE )
};

HVecDiffFormatting

enum HVecDiffFormatting

Format in rows of vectorial base gradients of base functions.

Enumerator
HVEC0_0
HVEC1_0
HVEC2_0
HVEC0_1
HVEC1_1
HVEC2_1
HVEC0_2
HVEC1_2
HVEC2_2

Definition at line 204 of file definitions.h.

                        {
  HVEC0_0 = 0,
  HVEC1_0,
  HVEC2_0,
  HVEC0_1,
  HVEC1_1,
  HVEC2_1,
  HVEC0_2,
  HVEC1_2,
  HVEC2_2
};

HVecFormatting

enum HVecFormatting

Format in rows of vectorial base functions.

Enumerator
HVEC0
HVEC1
HVEC2

Definition at line 199 of file definitions.h.

{ HVEC0 = 0, HVEC1, HVEC2 };

MoFEMErrorCodes

enum MoFEMErrorCodes

Error handling.

This is complementary to PETSC error codes. The numerical values for these are defined in include/petscerror.h. The names are defined in err.c

MoAB error messages are defined in moab/Types.hpp

Enumerator
MOFEM_SUCCESS
MOFEM_DATA_INCONSISTENCY
MOFEM_NOT_IMPLEMENTED
MOFEM_NOT_FOUND
MOFEM_OPERATION_UNSUCCESSFUL
MOFEM_IMPOSSIBLE_CASE
MOFEM_INVALID_DATA
MOFEM_NOT_INSTALLED
MOFEM_MOFEMEXCEPTION_THROW
MOFEM_STD_EXCEPTION_THROW
MOFEM_ATOM_TEST_INVALID
MOFEM_MOAB_ERROR

Definition at line 29 of file definitions.h.

                     {
  MOFEM_SUCCESS = 0,
  MOFEM_DATA_INCONSISTENCY = 100,
  MOFEM_NOT_IMPLEMENTED = 101,
  MOFEM_NOT_FOUND = 102,
  MOFEM_OPERATION_UNSUCCESSFUL = 103,
  MOFEM_IMPOSSIBLE_CASE = 104,
  MOFEM_INVALID_DATA = 105,
  MOFEM_NOT_INSTALLED = 106,
  MOFEM_MOFEMEXCEPTION_THROW = 107,
  MOFEM_STD_EXCEPTION_THROW = 108,
  MOFEM_ATOM_TEST_INVALID = 109,
  MOFEM_MOAB_ERROR = 110
};

MoFEMTypes

enum MoFEMTypes

Those types control how functions respond on arguments, f.e. error handling.

Enumerator
MF_ZERO
MF_EXCL
MF_EXIST
MF_NOT_THROW

Definition at line 110 of file definitions.h.

                {
  MF_ZERO = 0,
  MF_EXCL = 1 << 0,
  MF_EXIST = 1 << 1,
  MF_NOT_THROW = 1 << 2
};

RowColData

enum RowColData

RowColData.

Enumerator
ROW
COL
DATA
LASTROWCOLDATA

Definition at line 136 of file definitions.h.

{ ROW = 0, COL, DATA, LASTROWCOLDATA };

VERBOSITY_LEVELS

enum VERBOSITY_LEVELS

Verbosity levels.

Enumerator
DEFAULT_VERBOSITY
QUIET
VERBOSE
VERY_VERBOSE
NOISY
VERY_NOISY

Definition at line 219 of file definitions.h.

                      {
  DEFAULT_VERBOSITY = -1,
  QUIET = 0,
  VERBOSE,
  VERY_VERBOSE,
  NOISY,
  VERY_NOISY
};

Function Documentation

macro_is_deprecated_using_deprecated_function()

void macro_is_deprecated_using_deprecated_function

(

)

Is used to indicate that macro is deprecated Do nothing just triggers error at the compilation.

Definition at line 11 of file Core.cpp.

{}

Variable Documentation

ApproximationBaseNames

const char* const ApproximationBaseNames[]

static

Initial value:

= {
    "NOBASE",
    "AINSWORTH_LEGENDRE_BASE",
    "AINSWORTH_LOBATTO_BASE",
    "AINSWORTH_BERNSTEIN_BEZIER_BASE",
    "DEMKOWICZ_JACOBI_BASE",
    "USER_BASE",
    "LASTBASE"}

Examples

mofem/atom_tests/forces_and_sources_testing_edge_element.cpp, mofem/atom_tests/hanging_node_approx.cpp, and mofem/tutorials/adv-0/plastic.cpp.

Definition at line 72 of file definitions.h.

                                                    {
    "NOBASE",
    "AINSWORTH_LEGENDRE_BASE",
    "AINSWORTH_LOBATTO_BASE",
    "AINSWORTH_BERNSTEIN_BEZIER_BASE",
    "DEMKOWICZ_JACOBI_BASE",
    "USER_BASE",
    "LASTBASE"};

CoordinateTypesNames

const char* const CoordinateTypesNames[]

static

Initial value:

= {"Cartesian", "Polar",
                                                   "Cylindrical", "Spherical"}

Coordinate system names.

Definition at line 121 of file definitions.h.

                                                  {"Cartesian", "Polar",
                                                   "Cylindrical", "Spherical"};

CubitBCNames

const char* const CubitBCNames[]

static

Initial value:

= {
    "UNKNOWNSET",     "NODESET",         "SIDESET",         "BLOCKSET",
    "MATERIALSET",    "DISPLACEMENTSET", "FORCESET",        "PRESSURESET",
    "VELOCITYSET",    "ACCELERATIONSET", "TEMPERATURESET",  "HEATFLUXSET",
    "INTERFACESET",   "UNKNOWNNAME",     "MAT_ELASTICSET",  "MAT_INTERFSET",
    "MAT_THERMALSET", "BODYFORCESSET",   "MAT_MOISTURESET", "DIRICHLET_BC",
    "NEUMANN_BC",     "LASTSET_BC"}

Names of types of sets and boundary conditions.

Definition at line 188 of file definitions.h.

                                          {
    "UNKNOWNSET",     "NODESET",         "SIDESET",         "BLOCKSET",
    "MATERIALSET",    "DISPLACEMENTSET", "FORCESET",        "PRESSURESET",
    "VELOCITYSET",    "ACCELERATIONSET", "TEMPERATURESET",  "HEATFLUXSET",
    "INTERFACESET",   "UNKNOWNNAME",     "MAT_ELASTICSET",  "MAT_INTERFSET",
    "MAT_THERMALSET", "BODYFORCESSET",   "MAT_MOISTURESET", "DIRICHLET_BC",
    "NEUMANN_BC",     "LASTSET_BC"};

FieldContinuityNames

const char* const FieldContinuityNames[]

static

Initial value:

= {"CONTINUOUS",
                                                   "DISCONTINUOUS"}

Definition at line 105 of file definitions.h.

                                                  {"CONTINUOUS",
                                                   "DISCONTINUOUS"};

FieldSpaceNames

const char* const FieldSpaceNames[]

static

Initial value:

= {
    "NOSPACE", "NOFIELD", "H1", "HCURL", "HDIV", "L2", "LASTSPACE"}

Examples

mofem/atom_tests/hanging_node_approx.cpp.

Definition at line 92 of file definitions.h.

                                             {
    "NOSPACE", "NOFIELD", "H1", "HCURL", "HDIV", "L2", "LASTSPACE"};

MoFEMErrorCodesNames

const char* const MoFEMErrorCodesNames[]

static

Initial value:

= {
    "MOFEM_SUCCESS",
    "MOFEM_DATA_INCONSISTENCY",
    "MOFEM_NOT_IMPLEMENTED",
    "MOFEM_NOT_FOUND",
    "MOFEM_OPERATION_UNSUCCESSFUL",
    "MOFEM_IMPOSSIBLE_CASE",
    "MOFEM_INVALID_DATA",
    "MOFEM_MOFEMEXCEPTION_THROW",
    "MOFEM_STD_EXCEPTION_THROW",
    "MOFEM_ATOM_TEST_INVALID",
    "MOFEM_MOAB_ERROR"}

Definition at line 44 of file definitions.h.

                                                  {
    "MOFEM_SUCCESS",
    "MOFEM_DATA_INCONSISTENCY",
    "MOFEM_NOT_IMPLEMENTED",
    "MOFEM_NOT_FOUND",
    "MOFEM_OPERATION_UNSUCCESSFUL",
    "MOFEM_IMPOSSIBLE_CASE",
    "MOFEM_INVALID_DATA",
    "MOFEM_MOFEMEXCEPTION_THROW",
    "MOFEM_STD_EXCEPTION_THROW",
    "MOFEM_ATOM_TEST_INVALID",
    "MOFEM_MOAB_ERROR"};