MoFEM::CoreInterface Struct Reference

Interface. More...

#include "src/interfaces/Interface.hpp"

Inheritance diagram for MoFEM::CoreInterface:

Collaboration diagram for MoFEM::CoreInterface:

Public Member Functions
virtual	~CoreInterface ()=default
virtual const int	getValue () const =0
	Get the core.
virtual boost::shared_ptr< RefEntityTmp< 0 > >	make_shared_ref_entity (const EntityHandle ent)=0
	Get RefEntity.
Public Member Functions inherited from MoFEM::UnknownInterface
virtual MoFEMErrorCode	query_interface (boost::typeindex::type_index type_index, UnknownInterface **iface) const =0
template<class IFACE >
MoFEMErrorCode	registerInterface (bool error_if_registration_failed=true)
	Register interface.
template<class IFACE >
MoFEMErrorCode	getInterface (IFACE *&iface) const
	Get interface reference to pointer of interface.
template<class IFACE >
MoFEMErrorCode	getInterface (IFACE **const iface) const
	Get interface pointer to pointer of interface.
template<class IFACE , typename boost::enable_if< boost::is_pointer< IFACE >, int >::type = 0>
IFACE	getInterface () const
	Get interface pointer to pointer of interface.
template<class IFACE , typename boost::enable_if< boost::is_reference< IFACE >, int >::type = 0>
IFACE	getInterface () const
	Get reference to interface.
template<class IFACE >
IFACE *	getInterface () const
	Function returning pointer to interface.
virtual	~UnknownInterface ()=default

Interfaces
virtual moab::Interface &	get_moab ()=0
virtual const moab::Interface &	get_moab () const =0
virtual MoFEMErrorCode	set_moab_interface (moab::Interface &new_moab, int verb=VERBOSE)=0
	Set the moab interface object.
virtual MeshsetsManager *	get_meshsets_manager_ptr ()=0
	get MeshsetsManager pointer
virtual const MeshsetsManager *	get_meshsets_manager_ptr () const =0
	get MeshsetsManager pointer
virtual MeshsetsManager &	get_meshsets_manager ()=0
	get MeshsetsManager reference
virtual const MeshsetsManager &	get_meshsets_manager () const =0
	get MeshsetsManager reference

Basic entity
virtual boost::shared_ptr< BasicEntityData > &	get_basic_entity_data_ptr ()=0
	Get pointer to basic entity data.

Communicator
virtual MPI_Comm &	get_comm () const =0
virtual int	get_comm_size () const =0
virtual int	get_comm_rank () const =0

Check consistency
virtual MoFEMErrorCode	check_number_of_ents_in_ents_field (const std::string &name) const =0
	check data consistency in entitiesPtr
virtual MoFEMErrorCode	check_number_of_ents_in_ents_field () const =0
	check data consistency in entitiesPtr
virtual MoFEMErrorCode	check_number_of_ents_in_ents_finite_element (const std::string &name) const =0
	check data consistency in entsFiniteElements
virtual MoFEMErrorCode	check_number_of_ents_in_ents_finite_element () const =0
	check data consistency in entsFiniteElements

Database
virtual MoFEMErrorCode	clear_database (int verb=DEFAULT_VERBOSITY)=0
	Clear database.
virtual MoFEMErrorCode	rebuild_database (int verb=DEFAULT_VERBOSITY)=0
	Clear database and initialize it once again.

Delete and remove
virtual MoFEMErrorCode	remove_parents_by_ents (const Range &ents, int verb=DEFAULT_VERBOSITY)=0
	Remove parents from entities.
virtual MoFEMErrorCode	remove_parents_by_bit_ref (const BitRefLevel bit, const BitRefLevel mask, int verb=DEFAULT_VERBOSITY)=0
	Remove parent from entities on bit level.
virtual MoFEMErrorCode	remove_parents_by_parents (const Range &ents, int verb=DEFAULT_VERBOSITY)=0
	Remove parents from entities having parents in passed range.
virtual MoFEMErrorCode	delete_ents_by_bit_ref (const BitRefLevel bit, const BitRefLevel mask, const bool remove_parent=false, int verb=DEFAULT_VERBOSITY, MoFEMTypes mf=MF_ZERO)=0
	Delete entities from MoFEM and MOAB database.
virtual MoFEMErrorCode	remove_ents (const Range ents, int verb=DEFAULT_VERBOSITY)=0
	Remove entities from MoFEM database.
virtual MoFEMErrorCode	remove_ents_by_bit_ref (const BitRefLevel bit, const BitRefLevel mask, int verb=DEFAULT_VERBOSITY)=0
	Remove entities from MoFEM database.
virtual MoFEMErrorCode	delete_finite_element (const std::string name, int verb=DEFAULT_VERBOSITY)=0
	Delete finite element from MoFEM database.

Fields
virtual MoFEMErrorCode	add_broken_field (const std::string name, const FieldSpace space, const FieldApproximationBase base, const FieldCoefficientsNumber nb_of_coefficients, const std::vector< std::pair< EntityType, std::function< MoFEMErrorCode(BaseFunction::DofsSideMap &)> > > list_dof_side_map, const TagType tag_type=MB_TAG_SPARSE, const enum MoFEMTypes bh=MF_EXCL, int verb=DEFAULT_VERBOSITY)=0
	Add field.
virtual MoFEMErrorCode	add_field (const std::string name, const FieldSpace space, const FieldApproximationBase base, const FieldCoefficientsNumber nb_of_coefficients, const TagType tag_type=MB_TAG_SPARSE, const enum MoFEMTypes bh=MF_EXCL, int verb=DEFAULT_VERBOSITY)=0
	Add field.
virtual MoFEMErrorCode	delete_field (const std::string name, int verb=DEFAULT_VERBOSITY)=0
	Delete field.
virtual MoFEMErrorCode	add_ents_to_field_by_dim (const Range &ents, const int dim, const std::string &name, int verb=DEFAULT_VERBOSITY)=0
	Add entities to field meshset.
virtual MoFEMErrorCode	add_ents_to_field_by_type (const Range &ents, const EntityType type, const std::string &name, int verb=DEFAULT_VERBOSITY)=0
	Add entities to field meshset.
virtual MoFEMErrorCode	add_ents_to_field_by_dim (const EntityHandle meshset, const int dim, const std::string &name, const bool recursive=true, int verb=DEFAULT_VERBOSITY)=0
	Add entities to field meshset.
virtual MoFEMErrorCode	add_ents_to_field_by_type (const EntityHandle meshset, const EntityType type, const std::string &name, const bool recursive=true, int verb=DEFAULT_VERBOSITY)=0
	Add entities to field meshset.
virtual MoFEMErrorCode	create_vertices_and_add_to_field (const std::string name, const double coords[], int size, int verb=DEFAULT_VERBOSITY)=0
	Create vertices and add to the field object.
virtual MoFEMErrorCode	remove_ents_from_field_by_bit_ref (const BitRefLevel bit, const BitRefLevel mask, int verb=DEFAULT_VERBOSITY)=0
	remove entities from field
virtual MoFEMErrorCode	remove_ents_from_field (const std::string name, const EntityHandle meshset, const EntityType type, int verb=DEFAULT_VERBOSITY)=0
	remove entities from field
virtual MoFEMErrorCode	remove_ents_from_field (const std::string name, const Range ents, int verb=DEFAULT_VERBOSITY)=0
	remove entities from field
virtual MoFEMErrorCode	remove_ents_from_field (const Range ents, int verb=DEFAULT_VERBOSITY)=0
	remove entities from all fields
virtual MoFEMErrorCode	set_field_order (const EntityHandle meshset, const EntityType type, const std::string &name, const ApproximationOrder order, int verb=DEFAULT_VERBOSITY)=0
	Set order approximation of the entities in the field.
virtual MoFEMErrorCode	set_field_order (const Range &ents, const std::string &name, const ApproximationOrder order, int verb=DEFAULT_VERBOSITY)=0
	Set order approximation of the entities in the field.
virtual MoFEMErrorCode	set_field_order_by_entity_type_and_bit_ref (const BitRefLevel &bit, const BitRefLevel &mask, const EntityType type, const std::string &name, const ApproximationOrder order, int verb=DEFAULT_VERBOSITY)=0
	Set order approximation of the entities in the field.
virtual MoFEMErrorCode	list_fields () const =0
	list entities in the field
virtual MoFEMErrorCode	build_fields (int verb=DEFAULT_VERBOSITY)=0
virtual MoFEMErrorCode	build_field (const std::string field_name, int verb=DEFAULT_VERBOSITY)=0
	build field by name
virtual BitFieldId	get_field_id (const std::string &name) const =0
	Get field Id.
virtual FieldBitNumber	get_field_bit_number (const std::string name) const =0
	get field bit number
virtual std::string	get_field_name (const BitFieldId id) const =0
	get field name from id
virtual EntityHandle	get_field_meshset (const std::string name) const =0
	get field meshset
virtual MoFEMErrorCode	get_field_entities_by_dimension (const std::string name, int dim, Range &ents) const =0
	get entities in the field by dimension
virtual MoFEMErrorCode	get_field_entities_by_type (const std::string name, EntityType type, Range &ents) const =0
	get entities in the field by type
virtual MoFEMErrorCode	get_field_entities_by_handle (const std::string name, Range &ents) const =0
	get entities in the field by handle
virtual bool	check_field (const std::string &name) const =0
	check if field is in database
virtual const Field *	get_field_structure (const std::string &name, enum MoFEMTypes bh=MF_EXIST) const =0
	get field structure

Finite elements
virtual const FiniteElement *	get_finite_element_structure (const std::string &name, enum MoFEMTypes bh=MF_EXIST) const =0
	get finite element structure
virtual bool	check_finite_element (const std::string &name) const =0
	Check if finite element is in database.
virtual MoFEMErrorCode	add_finite_element (const std::string &fe_name, enum MoFEMTypes bh=MF_EXCL, int verb=DEFAULT_VERBOSITY)=0
	add finite element
virtual MoFEMErrorCode	modify_finite_element_adjacency_table (const std::string &fe_name, const EntityType type, ElementAdjacencyFunct function)=0
	modify finite element table, only for advanced user
virtual MoFEMErrorCode	modify_finite_element_add_field_data (const std::string &fe_name, const std::string name_field)=0
	set finite element field data
virtual MoFEMErrorCode	modify_finite_element_off_field_data (const std::string &fe_name, const std::string name_field)=0
	unset finite element field data
virtual MoFEMErrorCode	modify_finite_element_add_field_row (const std::string &fe_name, const std::string name_row)=0
	set field row which finite element use
virtual MoFEMErrorCode	modify_finite_element_off_field_row (const std::string &fe_name, const std::string name_row)=0
	unset field row which finite element use
virtual MoFEMErrorCode	modify_finite_element_add_field_col (const std::string &fe_name, const std::string name_row)=0
	set field col which finite element use
virtual MoFEMErrorCode	modify_finite_element_off_field_col (const std::string &fe_name, const std::string name_row)=0
	unset field col which finite element use
virtual MoFEMErrorCode	add_ents_to_finite_element_by_type (const EntityHandle entities, const EntityType type, const std::string name, const bool recursive=true)=0
	add entities to finite element
virtual MoFEMErrorCode	add_ents_to_finite_element_by_dim (const EntityHandle entities, const int dim, const std::string name, const bool recursive=true)=0
	add entities to finite element
virtual MoFEMErrorCode	add_ents_to_finite_element_by_type (const Range ents, const EntityType type, const std::string name)=0
	add entities to finite elements
virtual MoFEMErrorCode	add_ents_to_finite_element_by_dim (const Range ents, const int dim, const std::string name)=0
	add entities to finite elements
virtual MoFEMErrorCode	add_ents_to_finite_element_by_bit_ref (const BitRefLevel bit, const BitRefLevel mask, const std::string name, EntityType type, int verb=DEFAULT_VERBOSITY)=0
	add TET entities from given refinement level to finite element database given by name
virtual EntityHandle	get_finite_element_meshset (const std::string name) const =0
virtual MoFEMErrorCode	get_finite_element_entities_by_dimension (const std::string name, int dim, Range &ents) const =0
	get entities in the finite element by dimension
virtual MoFEMErrorCode	get_finite_element_entities_by_type (const std::string name, EntityType type, Range &ents) const =0
	get entities in the finite element by type
virtual MoFEMErrorCode	get_finite_element_entities_by_handle (const std::string name, Range &ents) const =0
	get entities in the finite element by handle
virtual MoFEMErrorCode	remove_ents_from_finite_element_by_bit_ref (const BitRefLevel bit, const BitRefLevel mask, int verb=DEFAULT_VERBOSITY)=0
	remove elements from given refinement level to finite element database
virtual MoFEMErrorCode	remove_ents_from_finite_element (const std::string name, const EntityHandle meshset, const EntityType type, int verb=DEFAULT_VERBOSITY)=0
	remove entities from given refinement level to finite element database
virtual MoFEMErrorCode	remove_ents_from_finite_element (const std::string name, const Range ents, int verb=DEFAULT_VERBOSITY)=0
	remove entities from finite element database
virtual MoFEMErrorCode	remove_ents_from_finite_element (const Range ents, int verb=DEFAULT_VERBOSITY)=0
	remove entities from finite elements in database
virtual MoFEMErrorCode	add_ents_to_finite_element_by_MESHSET (const EntityHandle meshset, const std::string &name, const bool recursive=false)=0
	add MESHSET element to finite element database given by name
virtual MoFEMErrorCode	list_finite_elements () const =0
	list finite elements in database

Problems
virtual MoFEMErrorCode	add_problem (const std::string &name, enum MoFEMTypes bh=MF_EXCL, int verb=DEFAULT_VERBOSITY)=0
	Add problem.
virtual bool	check_problem (const std::string name)=0
	check if problem exist
virtual MoFEMErrorCode	delete_problem (const std::string name)=0
	Delete problem.
virtual MoFEMErrorCode	modify_problem_add_finite_element (const std::string name_problem, const std::string &fe_name)=0
	add finite element to problem, this add entities assigned to finite element to a particular problem
virtual MoFEMErrorCode	modify_problem_unset_finite_element (const std::string name_problem, const std::string &fe_name)=0
	unset finite element from problem, this remove entities assigned to finite element to a particular problem
virtual MoFEMErrorCode	modify_problem_ref_level_add_bit (const std::string &name_problem, const BitRefLevel &bit)=0
	add ref level to problem
virtual MoFEMErrorCode	modify_problem_mask_ref_level_add_bit (const std::string &name_problem, const BitRefLevel &bit)=0
	set dof mask ref level for problem
virtual MoFEMErrorCode	modify_problem_ref_level_set_bit (const std::string &name_problem, const BitRefLevel &bit)=0
	set ref level for problem
virtual MoFEMErrorCode	modify_problem_mask_ref_level_set_bit (const std::string &name_problem, const BitRefLevel &bit)=0
	set dof mask ref level for problem
virtual MoFEMErrorCode	list_problem () const =0
	list problems
virtual MoFEMErrorCode	clear_problem (const std::string name, int verb=DEFAULT_VERBOSITY)=0
	clear problem
virtual MoFEMErrorCode	clear_problems (int verb=DEFAULT_VERBOSITY)=0
	clear problems
virtual MoFEMErrorCode	get_problem_finite_elements_entities (const std::string name, const std::string &fe_name, const EntityHandle meshset)=0
	add finite elements to the meshset

Clear dofs and entities
virtual MoFEMErrorCode	list_dofs_by_field_name (const std::string &name) const =0
virtual MoFEMErrorCode	clear_inactive_dofs (int verb=DEFAULT_VERBOSITY)=0
virtual MoFEMErrorCode	clear_dofs_fields_by_bit_ref (const BitRefLevel bit, const BitRefLevel mask, int verb=DEFAULT_VERBOSITY)=0
virtual MoFEMErrorCode	clear_dofs_fields (const Range ents, int verb=DEFAULT_VERBOSITY)=0
virtual MoFEMErrorCode	clear_dofs_fields (const std::string name, const Range ents, int verb=DEFAULT_VERBOSITY)=0
virtual MoFEMErrorCode	clear_ents_fields (const Range ents, int verb=DEFAULT_VERBOSITY)=0
virtual MoFEMErrorCode	clear_ents_fields (const std::string name, const Range ents, int verb=DEFAULT_VERBOSITY)=0
virtual MoFEMErrorCode	clear_ents_fields_by_bit_ref (const BitRefLevel bit, const BitRefLevel mask, int verb=DEFAULT_VERBOSITY)=0

Build fields, finite elements and problems
virtual MoFEMErrorCode	build_finite_elements (int verb=DEFAULT_VERBOSITY)=0
	Build finite elements.
virtual MoFEMErrorCode	build_finite_elements (const string fe_name, const Range *const ents_ptr=nullptr, int verb=DEFAULT_VERBOSITY)=0
	Build finite elements.

Clear finite elements
virtual MoFEMErrorCode	clear_finite_elements_by_bit_ref (const BitRefLevel bit, const BitRefLevel mask, int verb=DEFAULT_VERBOSITY)=0
virtual MoFEMErrorCode	clear_finite_elements (const Range &ents, int verb=DEFAULT_VERBOSITY)=0
virtual MoFEMErrorCode	clear_finite_elements (const std::string &fe_name, const Range &ents, int verb=DEFAULT_VERBOSITY)=0

Build adjacencies
virtual MoFEMErrorCode	build_adjacencies (const Range &ents, int verb=DEFAULT_VERBOSITY)=0
	build adjacencies
virtual MoFEMErrorCode	build_adjacencies (const BitRefLevel &bit, int verb=DEFAULT_VERBOSITY)=0
	build adjacencies
virtual MoFEMErrorCode	build_adjacencies (const BitRefLevel &bit, const BitRefLevel &mask, int verb=DEFAULT_VERBOSITY)=0
	build adjacencies

Clear adjacencies
virtual MoFEMErrorCode	clear_adjacencies_finite_elements (const BitRefLevel bit, const BitRefLevel mask, int verb=DEFAULT_VERBOSITY)=0
	clear adjacency map for finite elements on given bit level
virtual MoFEMErrorCode	clear_adjacencies_entities (const BitRefLevel bit, const BitRefLevel mask, int verb=DEFAULT_VERBOSITY)=0
	clear adjacency map for entities on given bit level
virtual MoFEMErrorCode	clear_adjacencies_entities (const Range ents, int verb=DEFAULT_VERBOSITY)=0
	clear adjacencies for field entities by entities
virtual MoFEMErrorCode	clear_adjacencies_entities (const std::string name, const Range ents, int verb=DEFAULT_VERBOSITY)=0
	clear adjacencies for field entities by entities and field namd

Making loops on elements and entities
virtual MoFEMErrorCode	problem_basic_method_preProcess (const Problem *problem_ptr, BasicMethod &method, int verb=DEFAULT_VERBOSITY)=0
	Set data for BasicMethod.
virtual MoFEMErrorCode	problem_basic_method_preProcess (const std::string &problem_name, BasicMethod &method, int verb=DEFAULT_VERBOSITY)=0
	Set data for BasicMethod.
virtual MoFEMErrorCode	problem_basic_method_postProcess (const Problem *problem_ptr, BasicMethod &method, int verb=DEFAULT_VERBOSITY)=0
	Set data for BasicMethod.
virtual MoFEMErrorCode	problem_basic_method_postProcess (const std::string &problem_name, BasicMethod &method, int verb=DEFAULT_VERBOSITY)=0
	Set data for BasicMethod.
virtual MoFEMErrorCode	cache_problem_entities (const std::string prb_name, CacheTupleWeakPtr cache_ptr)=0
	Cache variables.
virtual MoFEMErrorCode	loop_finite_elements (const std::string problem_name, const std::string &fe_name, FEMethod &method, boost::shared_ptr< NumeredEntFiniteElement_multiIndex > fe_ptr=nullptr, MoFEMTypes bh=MF_EXIST, CacheTupleWeakPtr cache_ptr=CacheTupleSharedPtr(), int verb=DEFAULT_VERBOSITY)=0
	Make a loop over finite elements.
virtual MoFEMErrorCode	loop_finite_elements (const Problem *problem_ptr, const std::string &fe_name, FEMethod &method, int lower_rank, int upper_rank, boost::shared_ptr< NumeredEntFiniteElement_multiIndex > fe_ptr=nullptr, MoFEMTypes bh=MF_EXIST, CacheTupleWeakPtr cache_ptr=CacheTupleSharedPtr(), int verb=DEFAULT_VERBOSITY)=0
	Make a loop over finite elements on partitions from upper to lower rank.
virtual MoFEMErrorCode	loop_finite_elements (const std::string problem_name, const std::string &fe_name, FEMethod &method, int lower_rank, int upper_rank, boost::shared_ptr< NumeredEntFiniteElement_multiIndex > fe_ptr=nullptr, MoFEMTypes bh=MF_EXIST, CacheTupleWeakPtr cache_ptr=CacheTupleSharedPtr(), int verb=DEFAULT_VERBOSITY)=0
	Make a loop over finite elements on partitions from upper to lower rank.
virtual MoFEMErrorCode	loop_dofs (const Problem *problem_ptr, const std::string &field_name, RowColData rc, DofMethod &method, int lower_rank, int upper_rank, int verb=DEFAULT_VERBOSITY)=0
	Make a loop over dofs.
virtual MoFEMErrorCode	loop_dofs (const std::string &problem_name, const std::string &field_name, RowColData rc, DofMethod &method, int lower_rank, int upper_rank, int verb=DEFAULT_VERBOSITY)=0
	Make a loop over dofs.
virtual MoFEMErrorCode	loop_dofs (const std::string &problem_name, const std::string &field_name, RowColData rc, DofMethod &method, int verb=DEFAULT_VERBOSITY)=0
	Make a loop over dofs.
virtual MoFEMErrorCode	loop_dofs (const std::string &field_name, DofMethod &method, int verb=DEFAULT_VERBOSITY)=0
	Make a loop over dofs.
virtual MoFEMErrorCode	loop_entities (const std::string field_name, EntityMethod &method, Range const *const ents=nullptr, int verb=DEFAULT_VERBOSITY)=0
	Loop over field entities.
virtual MoFEMErrorCode	loop_entities (const Problem *problem_ptr, const std::string field_name, RowColData rc, EntityMethod &method, int lower_rank, int upper_rank, int verb=DEFAULT_VERBOSITY)=0
	Loop over field entities in the problem.
virtual MoFEMErrorCode	loop_entities (const std::string problem_name, const std::string field_name, RowColData rc, EntityMethod &method, int lower_rank, int upper_rank, int verb=DEFAULT_VERBOSITY)=0
	Loop over field entities in the problem.
virtual MoFEMErrorCode	loop_entities (const std::string problem_name, const std::string field_name, RowColData rc, EntityMethod &method, int verb=DEFAULT_VERBOSITY)=0
	Loop over field entities in the problem.

Get pointers to multi-index database
virtual const Field_multiIndex *	get_fields () const =0
	Get the fields object.
virtual const RefEntity_multiIndex *	get_ref_ents () const =0
	Get the ref ents object.
virtual const RefElement_multiIndex *	get_ref_finite_elements () const =0
	Get the ref finite elements object.
virtual const FiniteElement_multiIndex *	get_finite_elements () const =0
	Get the finite elements object.
virtual const EntFiniteElement_multiIndex *	get_ents_finite_elements () const =0
	Get the ents finite elements object.
virtual const FieldEntity_multiIndex *	get_field_ents () const =0
	Get the field ents object.
virtual const DofEntity_multiIndex *	get_dofs () const =0
	Get the dofs object.
virtual const Problem *	get_problem (const std::string problem_name) const =0
	Get the problem object.
virtual const Problem_multiIndex *	get_problems () const =0
	Get the problems object.
virtual MoFEMErrorCode	get_ents_elements_adjacency (const FieldEntityEntFiniteElementAdjacencyMap_multiIndex **dofs_elements_adjacency) const =0
	Get the dofs elements adjacency object.
virtual const FieldEntityEntFiniteElementAdjacencyMap_multiIndex *	get_ents_elements_adjacency () const =0
	Get the dofs elements adjacency object.
virtual MoFEMErrorCode	get_fields (const Field_multiIndex **fields_ptr) const =0
	Get fields multi-index from database.
virtual MoFEMErrorCode	get_ref_ents (const RefEntity_multiIndex **refined_ents_ptr) const =0
	Get ref entities multi-index from database.
virtual MoFEMErrorCode	get_ref_finite_elements (const RefElement_multiIndex **refined_finite_elements_ptr) const =0
	Get ref finite elements multi-index form database.
virtual MoFEMErrorCode	get_finite_elements (const FiniteElement_multiIndex **fe_ptr) const =0
	Get finite elements multi-index.
virtual MoFEMErrorCode	get_ents_finite_elements (const EntFiniteElement_multiIndex **fe_ent_ptr) const =0
	Get entities finite elements multi-index.
virtual MoFEMErrorCode	get_problem (const std::string &problem_name, const Problem **problem_ptr) const =0
	Get problem database (data structure)
virtual MoFEMErrorCode	get_problems (const Problem_multiIndex **problems_ptr) const =0
	Get pointer to problems multi-index.
virtual MoFEMErrorCode	get_field_ents (const FieldEntity_multiIndex **field_ents) const =0
	Get field multi index.
virtual MoFEMErrorCode	get_dofs (const DofEntity_multiIndex **dofs_ptr) const =0
	Get dofs multi index.
virtual FieldEntityByUId::iterator	get_ent_field_by_name_begin (const std::string &field_name) const =0
	get begin iterator of field ents of given name (instead you can use IT_GET_ENT_FIELD_BY_NAME_FOR_LOOP(MFIELD,NAME,IT)
virtual FieldEntityByUId::iterator	get_ent_field_by_name_end (const std::string &field_name) const =0
	get end iterator of field ents of given name (instead you can use IT_GET_ENT_FIELD_BY_NAME_FOR_LOOP(MFIELD,NAME,IT)
virtual DofEntityByUId::iterator	get_dofs_by_name_begin (const std::string &field_name) const =0
	get begin iterator of field dofs of given name (instead you can use IT_GET_DOFS_FIELD_BY_NAME_FOR_LOOP(MFIELD,NAME,IT)
virtual DofEntityByUId::iterator	get_dofs_by_name_end (const std::string &field_name) const =0
	get begin iterator of field dofs of given name (instead you can use IT_GET_DOFS_FIELD_BY_NAME_FOR_LOOP(MFIELD,NAME,IT)
virtual DofEntityByUId::iterator	get_dofs_by_name_and_ent_begin (const std::string &field_name, const EntityHandle ent) const =0
	get begin iterator of field dofs of given name and ent(instead you can use IT_GET_DOFS_FIELD_BY_NAME_FOR_LOOP(MFIELD,NAME,ENT,IT)
virtual DofEntityByUId::iterator	get_dofs_by_name_and_ent_end (const std::string &field_name, const EntityHandle ent) const =0
	get end iterator of field dofs of given name and ent (instead you can use IT_GET_DOFS_FIELD_BY_NAME_FOR_LOOP(MFIELD,NAME,ENT,IT)
virtual DofEntityByUId::iterator	get_dofs_by_name_and_type_begin (const std::string &field_name, const EntityType type) const =0
	get begin iterator of field dofs of given name and ent type (instead you can use IT_GET_DOFS_FIELD_BY_NAME_FOR_LOOP(MFIELD,NAME,TYPE,IT)
virtual DofEntityByUId::iterator	get_dofs_by_name_and_type_end (const std::string &field_name, const EntityType type) const =0
	get end iterator of field dofs of given name and ent type(instead you can use IT_GET_DOFS_FIELD_BY_NAME_FOR_LOOP(MFIELD,NAME,TYPE,IT)
virtual EntFiniteElement_multiIndex::index< Unique_mi_tag >::type::iterator	get_fe_by_name_begin (const std::string &fe_name) const =0
	get begin iterator of finite elements of given name (instead you can use IT_GET_FES_BY_NAME_FOR_LOOP(MFIELD,NAME,IT)
virtual EntFiniteElement_multiIndex::index< Unique_mi_tag >::type::iterator	get_fe_by_name_end (const std::string &fe_name) const =0
	get end iterator of finite elements of given name (instead you can use IT_GET_FES_BY_NAME_FOR_LOOP(MFIELD,NAME,IT)

Additional Inherited Members
Static Public Member Functions inherited from MoFEM::UnknownInterface
static MoFEMErrorCode	getLibVersion (Version &version)
	Get library version.
static MoFEMErrorCode	getFileVersion (moab::Interface &moab, Version &version)
	Get database major version.
static MoFEMErrorCode	setFileVersion (moab::Interface &moab, Version version=Version(MoFEM_VERSION_MAJOR, MoFEM_VERSION_MINOR, MoFEM_VERSION_BUILD))
	Get database major version.
static MoFEMErrorCode	getInterfaceVersion (Version &version)
	Get database major version.

Detailed Description

Interface.

This interface is used by user to:

• create approximation fields,
  
• declare elements,
  

• declare problems,
  

  Todo:

  Clean interface, organize groups outsource some functions to independent interface

Examples

mofem/tools/extrude_prisms.cpp, and mofem/tools/mesh_cut.cpp.

Definition at line 27 of file Interface.hpp.

Constructor & Destructor Documentation

~CoreInterface()

virtual MoFEM::CoreInterface::~CoreInterface ( )

virtualdefault

Member Function Documentation

add_broken_field()

virtual MoFEMErrorCode MoFEM::CoreInterface::add_broken_field ( const std::string  name, const FieldSpace  space, const FieldApproximationBase  base, const FieldCoefficientsNumber  nb_of_coefficients, const std::vector< std::pair< EntityType, std::function< MoFEMErrorCode(BaseFunction::DofsSideMap &)> > >  list_dof_side_map, const TagType  tag_type = MB_TAG_SPARSE, const enum MoFEMTypes  bh = MF_EXCL, int  verb = DEFAULT_VERBOSITY  )

pure virtual

Add field.

Note

add_file is a collective, should be executed on all processors. Otherwise could lead to deadlock.

Parameters

name	name of the field
space	space (L2,H1,Hdiv,Hcurl)
base	approximation base, see FieldApproximationBase
nb_of_coefficients	number of field coefficients
tag_type	type of the tag MB_TAG_DENSE or MB_TAG_SPARSE (DENSE is faster and uses less memory, SPARSE is more flexible if you define field on subdomains)
bh	if MF_EXCL throws error if field exits, MF_ZERO no error if field exist
verb	verbosity level

Returns

error code

Examples

mofem/users_modules/eshelbian_plasticity/src/impl/EshelbianPlasticity.cpp.

add_field()

virtual MoFEMErrorCode MoFEM::CoreInterface::add_field ( const std::string  name, const FieldSpace  space, const FieldApproximationBase  base, const FieldCoefficientsNumber  nb_of_coefficients, const TagType  tag_type = MB_TAG_SPARSE, const enum MoFEMTypes  bh = MF_EXCL, int  verb = DEFAULT_VERBOSITY  )

pure virtual

Add field.

Note

add_file is a collective, should be executed on all processors. Otherwise could lead to deadlock.

Parameters

name	name of the field
space	space (L2,H1,Hdiv,Hcurl)
continuity	continuity (CONTINUOUS, DISCONTINUOUS)
base	approximation base, see FieldApproximationBase
nb_of_coefficients	number of field coefficients
tag_type	type of the tag MB_TAG_DENSE or MB_TAG_SPARSE (DENSE is faster and uses less memory, SPARSE is more flexible if you define field on subdomains)
bh	if MF_EXCL throws error if field exits, MF_ZERO no error if field exist
verb	verbosity level

Returns

error code

Implemented in MoFEM::CoreTmp< 0 >.

Examples

mofem/atom_tests/build_composite_problem.cpp, mofem/atom_tests/build_large_problem.cpp, mofem/atom_tests/build_problems.cpp, mofem/atom_tests/continuity_check_on_contact_prism_side_ele.cpp, mofem/atom_tests/continuity_check_on_skeleton_3d.cpp, mofem/atom_tests/dm_build_partitioned_mesh.cpp, mofem/atom_tests/dm_create_subdm.cpp, mofem/atom_tests/dm_partitioned_no_field.cpp, mofem/atom_tests/field_blas.cpp, mofem/atom_tests/field_blas_axpy.cpp, mofem/atom_tests/forces_and_sources_testing_edge_element.cpp, mofem/atom_tests/forces_and_sources_testing_flat_prism_element.cpp, mofem/atom_tests/forces_and_sources_testing_users_base.cpp, mofem/atom_tests/hcurl_divergence_operator_2d.cpp, mofem/atom_tests/mesh_insert_interface_atom.cpp, mofem/atom_tests/prism_elements_from_surface.cpp, mofem/atom_tests/prism_polynomial_approximation.cpp, mofem/atom_tests/quad_polynomial_approximation.cpp, mofem/atom_tests/remove_entities_from_problem.cpp, mofem/atom_tests/remove_entities_from_problem_not_partitioned.cpp, mofem/tools/mesh_smoothing.cpp, mofem/tutorials/cor-0to1/src/UnsaturatedFlow.hpp, mofem/tutorials/cor-10/navier_stokes.cpp, mofem/tutorials/cor-7/elasticity_mixed_formulation.cpp, mofem/tutorials/max-0/src/MagneticElement.hpp, mofem/tutorials/vec-7/adjoint.cpp, mofem/users_modules/basic_finite_elements/elasticity/elasticity.cpp, mofem/users_modules/basic_finite_elements/nonlinear_elasticity/nonlinear_dynamics.cpp, mofem/users_modules/bone_remodelling/src/impl/Remodeling.cpp, mofem/users_modules/eshelbian_plasticity/src/impl/EshelbianPlasticity.cpp, and mofem/users_modules/minimal_surface_equation/minimal_surface_area.cpp.

build_adjacencies() [1/3]

virtual MoFEMErrorCode MoFEM::CoreInterface::build_adjacencies ( const BitRefLevel &  bit, const BitRefLevel &  mask, int  verb = DEFAULT_VERBOSITY  )

pure virtual

build adjacencies

Parameters

bit	adjacencies for refine level
mask	mask for bit level

This function will get information of adjacent finite elements and fields of all entities. If this is not executed, partitioning the problem is not possible. Adjacency map is based on degrees of freedom adjacent to elements. This linked to geometric element connectivity.

If new degrees of freedom or new finite elements are added to the database, adjacency map has to be rebuild.

Implemented in MoFEM::CoreTmp< 0 >.

build_adjacencies() [2/3]

virtual MoFEMErrorCode MoFEM::CoreInterface::build_adjacencies ( const BitRefLevel &  bit, int  verb = DEFAULT_VERBOSITY  )

pure virtual

build adjacencies

Parameters

bit	adjacencies for refine level

This function will get information of adjacent finite elements and fields of all entities. If this is not executed, partitioning the problem is not possible. Adjacency map is based on degrees of freedom adjacent to elements. This linked to geometric element connectivity.

If new degrees of freedom or new finite elements are added to the database, adjacency map has to be rebuild.

Implemented in MoFEM::CoreTmp< 0 >.

build_adjacencies() [3/3]

virtual MoFEMErrorCode MoFEM::CoreInterface::build_adjacencies ( const Range &  ents, int  verb = DEFAULT_VERBOSITY  )

pure virtual

build adjacencies

Parameters

list	of entities

This function will get information of adjacent finite elements and fields of all entities. If this is not executed, partitioning the problem is not possible. Adjacency map is based on degrees of freedom adjacent to elements. This linked to geometric element connectivity.

If new degrees of freedom or new finite elements are added to the database, adjacency map has to be rebuild.

Implemented in MoFEM::CoreTmp< 0 >.

Examples

mofem/atom_tests/build_composite_problem.cpp, mofem/atom_tests/build_large_problem.cpp, mofem/atom_tests/build_problems.cpp, mofem/atom_tests/continuity_check_on_contact_prism_side_ele.cpp, mofem/atom_tests/continuity_check_on_skeleton_3d.cpp, mofem/atom_tests/dm_build_partitioned_mesh.cpp, mofem/atom_tests/dm_create_subdm.cpp, mofem/atom_tests/dm_partitioned_no_field.cpp, mofem/atom_tests/forces_and_sources_testing_edge_element.cpp, mofem/atom_tests/forces_and_sources_testing_flat_prism_element.cpp, mofem/atom_tests/forces_and_sources_testing_users_base.cpp, mofem/atom_tests/hcurl_divergence_operator_2d.cpp, mofem/atom_tests/mesh_insert_interface_atom.cpp, mofem/atom_tests/prism_elements_from_surface.cpp, mofem/atom_tests/prism_polynomial_approximation.cpp, mofem/atom_tests/quad_polynomial_approximation.cpp, mofem/atom_tests/remove_entities_from_problem.cpp, mofem/atom_tests/remove_entities_from_problem_not_partitioned.cpp, mofem/tutorials/cor-0to1/src/UnsaturatedFlow.hpp, mofem/tutorials/cor-10/navier_stokes.cpp, mofem/tutorials/cor-7/elasticity_mixed_formulation.cpp, mofem/tutorials/max-0/src/MagneticElement.hpp, mofem/tutorials/max-1/lorentz_force.cpp, mofem/tutorials/mix-0/mixed_poisson.cpp, mofem/tutorials/vec-7/adjoint.cpp, mofem/users_modules/basic_finite_elements/elasticity/elasticity.cpp, mofem/users_modules/basic_finite_elements/nonlinear_elasticity/nonlinear_dynamics.cpp, mofem/users_modules/bone_remodelling/src/impl/Remodeling.cpp, mofem/users_modules/eshelbian_plasticity/src/impl/EshelbianPlasticity.cpp, and mofem/users_modules/minimal_surface_equation/minimal_surface_area.cpp.

build_field()

virtual MoFEMErrorCode MoFEM::CoreInterface::build_field ( const std::string  field_name, int  verb = DEFAULT_VERBOSITY  )

pure virtual

build field by name

Parameters

field_name	Name of the field to build
verb	Verbosity level (default: DEFAULT_VERBOSITY)

Returns

MoFEMErrorCode Error code indicating success or failure

Implemented in MoFEM::CoreTmp< 0 >.

cache_problem_entities()

virtual MoFEMErrorCode MoFEM::CoreInterface::cache_problem_entities ( const std::string  prb_name, CacheTupleWeakPtr  cache_ptr  )

pure virtual

Cache variables.

Parameters

prb_name
cache_ptr

Returns

MoFEMErrorCode

Implemented in MoFEM::CoreTmp< 0 >.

Examples

mofem/atom_tests/continuity_check_on_skeleton_3d.cpp, and mofem/tutorials/max-1/lorentz_force.cpp.

check_finite_element()

virtual bool MoFEM::CoreInterface::check_finite_element ( const std::string &  name ) const

pure virtual

Check if finite element is in database.

Parameters

name	Name of finite element to check

Returns

true if element is declared in the database, false otherwise

Implemented in MoFEM::CoreTmp< 0 >.

Examples

mofem/tutorials/cor-10/navier_stokes.cpp, mofem/tutorials/cor-7/elasticity_mixed_formulation.cpp, mofem/tutorials/scl-10/photon_diffusion.cpp, mofem/users_modules/bone_remodelling/src/impl/Remodeling.cpp, and mofem/users_modules/eshelbian_plasticity/src/impl/EshelbianPlasticity.cpp.

check_number_of_ents_in_ents_field() [1/2]

virtual MoFEMErrorCode MoFEM::CoreInterface::check_number_of_ents_in_ents_field ( ) const

pure virtual

check data consistency in entitiesPtr

Returns

MoFEMErrorCode Error code indicating success or failure

Implemented in MoFEM::CoreTmp< 0 >.

check_number_of_ents_in_ents_field() [2/2]

virtual MoFEMErrorCode MoFEM::CoreInterface::check_number_of_ents_in_ents_field ( const std::string &  name ) const

pure virtual

check data consistency in entitiesPtr

Parameters

name	Field name to check consistency for

Returns

MoFEMErrorCode Error code indicating success or failure

Implemented in MoFEM::CoreTmp< 0 >.

check_number_of_ents_in_ents_finite_element() [1/2]

virtual MoFEMErrorCode MoFEM::CoreInterface::check_number_of_ents_in_ents_finite_element ( ) const

pure virtual

check data consistency in entsFiniteElements

Returns

MoFEMErrorCode Error code indicating success or failure

Implemented in MoFEM::CoreTmp< 0 >.

check_number_of_ents_in_ents_finite_element() [2/2]

virtual MoFEMErrorCode MoFEM::CoreInterface::check_number_of_ents_in_ents_finite_element ( const std::string &  name ) const

pure virtual

check data consistency in entsFiniteElements

Parameters

name	Finite element name to check consistency for

Returns

MoFEMErrorCode Error code indicating success or failure

Implemented in MoFEM::CoreTmp< 0 >.

clear_adjacencies_entities() [1/3]

virtual MoFEMErrorCode MoFEM::CoreInterface::clear_adjacencies_entities ( const BitRefLevel  bit, const BitRefLevel  mask, int  verb = DEFAULT_VERBOSITY  )

pure virtual

clear adjacency map for entities on given bit level

Parameters

bit
mask

Implemented in MoFEM::CoreTmp< 0 >.

clear_adjacencies_entities() [2/3]

virtual MoFEMErrorCode MoFEM::CoreInterface::clear_adjacencies_entities ( const Range  ents, int  verb = DEFAULT_VERBOSITY  )

pure virtual

clear adjacencies for field entities by entities

Implemented in MoFEM::CoreTmp< 0 >.

clear_adjacencies_entities() [3/3]

virtual MoFEMErrorCode MoFEM::CoreInterface::clear_adjacencies_entities ( const std::string  name, const Range  ents, int  verb = DEFAULT_VERBOSITY  )

pure virtual

clear adjacencies for field entities by entities and field namd

Implemented in MoFEM::CoreTmp< 0 >.

clear_adjacencies_finite_elements()

virtual MoFEMErrorCode MoFEM::CoreInterface::clear_adjacencies_finite_elements ( const BitRefLevel  bit, const BitRefLevel  mask, int  verb = DEFAULT_VERBOSITY  )

pure virtual

clear adjacency map for finite elements on given bit level

Parameters

bit
mask

Implemented in MoFEM::CoreTmp< 0 >.

clear_database()

virtual MoFEMErrorCode MoFEM::CoreInterface::clear_database ( int  verb = DEFAULT_VERBOSITY )

pure virtual

Clear database.

Parameters

verb	Verbosity level

Returns

Error code

Implemented in MoFEM::CoreTmp< 0 >.

clear_finite_elements() [1/2]

virtual MoFEMErrorCode MoFEM::CoreInterface::clear_finite_elements ( const Range &  ents, int  verb = DEFAULT_VERBOSITY  )

pure virtual

clear finite elements

Implemented in MoFEM::CoreTmp< 0 >.

clear_finite_elements() [2/2]

virtual MoFEMErrorCode MoFEM::CoreInterface::clear_finite_elements ( const std::string &  fe_name, const Range &  ents, int  verb = DEFAULT_VERBOSITY  )

pure virtual

clear finite elements

Implemented in MoFEM::CoreTmp< 0 >.

clear_finite_elements_by_bit_ref()

virtual MoFEMErrorCode MoFEM::CoreInterface::clear_finite_elements_by_bit_ref ( const BitRefLevel  bit, const BitRefLevel  mask, int  verb = DEFAULT_VERBOSITY  )

pure virtual

clear finite elements

Implemented in MoFEM::CoreTmp< 0 >.

create_vertices_and_add_to_field()

virtual MoFEMErrorCode MoFEM::CoreInterface::create_vertices_and_add_to_field ( const std::string  name, const double  coords[], int  size, int  verb = DEFAULT_VERBOSITY  )

pure virtual

Create vertices and add to the field object.

Create vertices and add them to the field. Those vertices would be carrying DOFs of the field.

Note

This function is typically used when NOFIELD is created, for example load factor in arc-length control.

Parameters

name	Name of the field to add vertices to
coords	Array of coordinates for the vertices
size	Number of vertices to create
verb	Verbosity level (default: DEFAULT_VERBOSITY)

Returns

MoFEMErrorCode Error code indicating success or failure

Implemented in MoFEM::CoreTmp< 0 >.

Examples

mofem/atom_tests/dm_partitioned_no_field.cpp, and mofem/atom_tests/simple_l2_only.cpp.

delete_ents_by_bit_ref()

virtual MoFEMErrorCode MoFEM::CoreInterface::delete_ents_by_bit_ref ( const BitRefLevel  bit, const BitRefLevel  mask, const bool  remove_parent = false, int  verb = DEFAULT_VERBOSITY, MoFEMTypes  mf = MF_ZERO  )

pure virtual

Delete entities from MoFEM and MOAB database.

Parameters

bit	Bit level to select entities
mask	Mask for bit level selection
remove_parent	If true, also remove parent relationships
verb	Verbosity level (default: DEFAULT_VERBOSITY)
mf	MoFEM type control (default: MF_ZERO)

Returns

MoFEMErrorCode Error code indicating success or failure

Implemented in MoFEM::CoreTmp< 0 >.

Examples

mofem/atom_tests/continuity_check_on_contact_prism_side_ele.cpp, and mofem/tools/split_sideset.cpp.

delete_field()

virtual MoFEMErrorCode MoFEM::CoreInterface::delete_field ( const std::string  name, int  verb = DEFAULT_VERBOSITY  )

pure virtual

Delete field.

Parameters

name	Field name to delete
verb	Verbosity level (default: DEFAULT_VERBOSITY)

Returns

MoFEMErrorCode Error code indicating success or failure

Implemented in MoFEM::CoreTmp< 0 >.

Examples

mofem/tools/remove_mofem_meshsets.cpp.

delete_finite_element()

virtual MoFEMErrorCode MoFEM::CoreInterface::delete_finite_element ( const std::string  name, int  verb = DEFAULT_VERBOSITY  )

pure virtual

Delete finite element from MoFEM database.

Parameters

name	Name of finite element to delete
verb	Verbosity level (default: DEFAULT_VERBOSITY)

Returns

MoFEMErrorCode Error code indicating success or failure

Implemented in MoFEM::CoreTmp< 0 >.

Examples

mofem/tools/remove_mofem_meshsets.cpp.

get_basic_entity_data_ptr()

virtual boost::shared_ptr< BasicEntityData > & MoFEM::CoreInterface::get_basic_entity_data_ptr ( )

pure virtual

Get pointer to basic entity data.

This structure keeps data like tag handles and other data used to construct MoFEM entities, DOFs and finite elements.

Returns

boost::shared_ptr<BasicEntityData>& Reference to shared pointer of BasicEntityData

Implemented in MoFEM::CoreTmp< 0 >.

get_comm()

virtual MPI_Comm & MoFEM::CoreInterface::get_comm ( ) const

pure virtual

get MPI communicator

Returns

MPI_Comm& Reference to MPI communicator

Implemented in MoFEM::CoreTmp< 0 >.

Examples

ep.cpp, mofem/atom_tests/build_composite_problem.cpp, mofem/atom_tests/child_and_parent.cpp, mofem/atom_tests/dm_partitioned_no_field.cpp, mofem/atom_tests/hanging_node_approx.cpp, mofem/atom_tests/higher_derivatives.cpp, mofem/atom_tests/log.cpp, mofem/atom_tests/schur_test_diag_mat.cpp, mofem/atom_tests/simple_interface.cpp, mofem/atom_tests/test_broken_space.cpp, mofem/atom_tests/test_cache_on_entities.cpp, mofem/tutorials/adv-0/plastic.cpp, mofem/tutorials/adv-0/src/PlasticOpsMonitor.hpp, mofem/tutorials/adv-1/src/ContactOps.hpp, mofem/tutorials/adv-2/thermo_elastic.cpp, mofem/tutorials/adv-3/level_set.cpp, mofem/tutorials/adv-4/dynamic_first_order_con_law.cpp, mofem/tutorials/adv-5/seepage.cpp, mofem/tutorials/cor-0to1/src/UnsaturatedFlow.hpp, mofem/tutorials/cor-0to1/unsaturated_transport.cpp, mofem/tutorials/cor-2to5/src/AuxPoissonFunctions.hpp, mofem/tutorials/cor-9/reaction_diffusion.cpp, mofem/tutorials/fun-0/hello_world.cpp, mofem/tutorials/fun-1/integration.cpp, mofem/tutorials/mix-0/mixed_poisson.cpp, mofem/tutorials/mix-1/phase.cpp, mofem/tutorials/scl-0/approximaton.cpp, mofem/tutorials/scl-1/poisson_2d_homogeneous.cpp, mofem/tutorials/scl-10/photon_diffusion.cpp, mofem/tutorials/scl-11/poisson_2d_dis_galerkin.cpp, mofem/tutorials/scl-12/electrostatics.cpp, mofem/tutorials/vec-1/eigen_elastic.cpp, mofem/tutorials/vec-10/schur_elastic.cpp, mofem/tutorials/vec-2/src/NonlinearElasticExample.hpp, mofem/tutorials/vec-4/approx_sphere.cpp, mofem/tutorials/vec-5/free_surface.cpp, mofem/tutorials/vec-7/adjoint.cpp, mofem/users_modules/adolc-plasticity/adolc_plasticity.cpp, mofem/users_modules/basic_finite_elements/elasticity/elasticity.cpp, mofem/users_modules/basic_finite_elements/src/NavierStokesElement.hpp, mofem/users_modules/basic_finite_elements/src/impl/HookeElement.cpp, mofem/users_modules/eshelbian_plasticity/ep.cpp, and mofem/users_modules/eshelbian_plasticity/src/impl/EshelbianPlasticity.cpp.

get_comm_rank()

virtual int MoFEM::CoreInterface::get_comm_rank ( ) const

pure virtual

get comm rank

Returns

int Rank of current process in the communicator

Implemented in MoFEM::CoreTmp< 0 >.

Examples

mofem/atom_tests/build_composite_problem.cpp, mofem/atom_tests/child_and_parent.cpp, mofem/atom_tests/dm_partitioned_no_field.cpp, mofem/atom_tests/field_evaluator.cpp, mofem/atom_tests/hanging_node_approx.cpp, mofem/atom_tests/higher_derivatives.cpp, mofem/atom_tests/partition_mesh.cpp, mofem/atom_tests/schur_test_diag_mat.cpp, mofem/atom_tests/simple_interface.cpp, mofem/atom_tests/test_broken_space.cpp, mofem/tutorials/adv-0/src/PlasticOpsMonitor.hpp, mofem/tutorials/adv-1/src/ContactOps.hpp, mofem/tutorials/adv-2/thermo_elastic.cpp, mofem/tutorials/adv-3/level_set.cpp, mofem/tutorials/adv-4/dynamic_first_order_con_law.cpp, mofem/tutorials/adv-5/seepage.cpp, mofem/tutorials/cor-10/navier_stokes.cpp, mofem/tutorials/cor-2to5/src/AuxPoissonFunctions.hpp, mofem/tutorials/fun-1/integration.cpp, mofem/tutorials/max-1/lorentz_force.cpp, mofem/tutorials/mix-0/mixed_poisson.cpp, mofem/tutorials/scl-0/approximaton.cpp, mofem/tutorials/scl-1/poisson_2d_homogeneous.cpp, mofem/tutorials/scl-10/photon_diffusion.cpp, mofem/tutorials/scl-11/poisson_2d_dis_galerkin.cpp, mofem/tutorials/scl-12/electrostatics.cpp, mofem/tutorials/vec-1/eigen_elastic.cpp, mofem/tutorials/vec-2/src/NonlinearElasticExample.hpp, mofem/tutorials/vec-4/approx_sphere.cpp, mofem/tutorials/vec-5/free_surface.cpp, mofem/tutorials/vec-7/adjoint.cpp, mofem/users_modules/adolc-plasticity/adolc_plasticity.cpp, mofem/users_modules/basic_finite_elements/elasticity/elasticity.cpp, mofem/users_modules/basic_finite_elements/src/NavierStokesElement.hpp, mofem/users_modules/bone_remodelling/src/impl/Remodeling.cpp, and mofem/users_modules/eshelbian_plasticity/src/impl/EshelbianPlasticity.cpp.

get_comm_size()

virtual int MoFEM::CoreInterface::get_comm_size ( ) const

pure virtual

get communicator size

Returns

int Number of processes in the communicator

Implemented in MoFEM::CoreTmp< 0 >.

Examples

mofem/atom_tests/build_composite_problem.cpp, mofem/atom_tests/loop_entities.cpp, mofem/atom_tests/partition_mesh.cpp, mofem/atom_tests/remove_entities_from_problem.cpp, mofem/atom_tests/simple_interface.cpp, mofem/tools/mesh_smoothing.cpp, mofem/tutorials/scl-12/electrostatics.cpp, mofem/tutorials/vec-4/approx_sphere.cpp, mofem/tutorials/vec-5/free_surface.cpp, and mofem/users_modules/eshelbian_plasticity/src/impl/EshelbianPlasticity.cpp.

get_field_bit_number()

virtual FieldBitNumber MoFEM::CoreInterface::get_field_bit_number ( const std::string  name ) const

pure virtual

get field bit number

Parameters

name	Name of the field

Returns

FieldBitNumber The bit number assigned to the field Example:

auto field_number = mField.get_field_bit_number("DISPLACEMENT");

Implemented in MoFEM::CoreTmp< 0 >.

Examples

mofem/atom_tests/dm_partitioned_no_field.cpp, mofem/tutorials/scl-9/heat_method.cpp, and mofem/tutorials/vec-5/free_surface.cpp.

get_field_id()

virtual BitFieldId MoFEM::CoreInterface::get_field_id ( const std::string &  name ) const

pure virtual

Get field Id.

Parameters

name	Name of the field

Returns

BitFieldId The unique bit field identifier

Implemented in MoFEM::CoreTmp< 0 >.

get_field_meshset()

virtual EntityHandle MoFEM::CoreInterface::get_field_meshset ( const std::string  name ) const

pure virtual

get field meshset

Parameters

name	Name of the field

Returns

EntityHandle Handle to the meshset containing field entities Example:

EntityHandle disp_files_meshset = mField.get_field_meshset("DISPLACEMENT");

Implemented in MoFEM::CoreTmp< 0 >.

Examples

mofem/atom_tests/dm_partitioned_no_field.cpp, and mofem/atom_tests/forces_and_sources_testing_flat_prism_element.cpp.

get_field_name()

virtual std::string MoFEM::CoreInterface::get_field_name ( const BitFieldId  id ) const

pure virtual

get field name from id

Parameters

id	The bit field identifier

Returns

std::string The name of the field

Implemented in MoFEM::CoreTmp< 0 >.

Examples

mofem/atom_tests/dm_build_partitioned_mesh.cpp.

get_finite_element_structure()

virtual const FiniteElement * MoFEM::CoreInterface::get_finite_element_structure ( const std::string &  name, enum MoFEMTypes  bh = MF_EXIST  ) const

pure virtual

get finite element structure

If finite element is not found throw error if bh == MF_EXIST, or return nullptr if bh == MF_ZERO, i.e. otherwise

Parameters

name	Name of the finite element
bh	Controls behaviour when finite element is not found

Returns

const FiniteElement* Pointer to finite element structure, or nullptr if not found and bh==MF_ZERO

Implemented in MoFEM::CoreTmp< 0 >.

get_meshsets_manager() [1/2]

virtual const MeshsetsManager & MoFEM::CoreInterface::get_meshsets_manager ( ) const

pure virtual

get MeshsetsManager reference

Returns

const MeshsetsManager& Const reference to MeshsetsManager object

Implemented in MoFEM::CoreTmp< 0 >.

get_meshsets_manager() [2/2]

virtual MeshsetsManager & MoFEM::CoreInterface::get_meshsets_manager ( )

pure virtual

get MeshsetsManager reference

Returns

MeshsetsManager& Reference to MeshsetsManager object

Implemented in MoFEM::CoreTmp< 0 >.

get_meshsets_manager_ptr() [1/2]

virtual const MeshsetsManager * MoFEM::CoreInterface::get_meshsets_manager_ptr ( ) const

pure virtual

get MeshsetsManager pointer

Returns

const MeshsetsManager* Const pointer to MeshsetsManager object

Implemented in MoFEM::CoreTmp< 0 >.

get_meshsets_manager_ptr() [2/2]

virtual MeshsetsManager * MoFEM::CoreInterface::get_meshsets_manager_ptr ( )

pure virtual

get MeshsetsManager pointer

Returns

MeshsetsManager* Pointer to MeshsetsManager object

Implemented in MoFEM::CoreTmp< 0 >.

get_moab() [1/2]

virtual const moab::Interface & MoFEM::CoreInterface::get_moab ( ) const

pure virtual

get moab instance interface

Returns

const moab::Interface& Const reference to MOAB interface

Implemented in MoFEM::CoreTmp< 0 >.

get_moab() [2/2]

virtual moab::Interface & MoFEM::CoreInterface::get_moab ( )

pure virtual

get moab instance

Returns

moab::Interface& Reference to MOAB interface

Implemented in MoFEM::CoreTmp< 0 >.

Examples

mofem/atom_tests/add_blockset.cpp, mofem/atom_tests/boundary_marker.cpp, mofem/atom_tests/build_composite_problem.cpp, mofem/atom_tests/child_and_parent.cpp, mofem/atom_tests/dm_partitioned_no_field.cpp, mofem/atom_tests/field_blas.cpp, mofem/atom_tests/field_blas_axpy.cpp, mofem/atom_tests/forces_and_sources_testing_edge_element.cpp, mofem/atom_tests/forces_and_sources_testing_flat_prism_element.cpp, mofem/atom_tests/hanging_node_approx.cpp, mofem/atom_tests/hcurl_divergence_operator_2d.cpp, mofem/atom_tests/loop_entities.cpp, mofem/atom_tests/prism_elements_from_surface.cpp, mofem/atom_tests/remove_entities_from_problem.cpp, mofem/atom_tests/remove_entities_from_problem_not_partitioned.cpp, mofem/atom_tests/simple_interface.cpp, mofem/atom_tests/simple_l2_only.cpp, mofem/atom_tests/tensor_divergence_operator.cpp, mofem/atom_tests/test_broken_space.cpp, mofem/atom_tests/test_cache_on_entities.cpp, mofem/tools/extrude_prisms.cpp, mofem/tools/mesh_smoothing.cpp, mofem/tools/split_sideset.cpp, mofem/tutorials/adv-0/plastic.cpp, mofem/tutorials/adv-0/src/PlasticOps.hpp, mofem/tutorials/adv-2/src/ThermoElasticOps.hpp, mofem/tutorials/adv-2/thermo_elastic.cpp, mofem/tutorials/adv-3/level_set.cpp, mofem/tutorials/adv-4/dynamic_first_order_con_law.cpp, mofem/tutorials/adv-5/seepage.cpp, mofem/tutorials/clx-0/helmholtz.cpp, mofem/tutorials/cor-0to1/src/UnsaturatedFlow.hpp, mofem/tutorials/cor-0to1/unsaturated_transport.cpp, mofem/tutorials/cor-10/navier_stokes.cpp, mofem/tutorials/cor-6/simple_elasticity.cpp, mofem/tutorials/cor-7/src/ElasticityMixedFormulation.hpp, mofem/tutorials/cor-9/reaction_diffusion.cpp, mofem/tutorials/fun-2/plot_base.cpp, mofem/tutorials/max-0/src/MagneticElement.hpp, mofem/tutorials/mix-0/mixed_poisson.cpp, mofem/tutorials/mix-1/phase.cpp, mofem/tutorials/scl-1/poisson_2d_homogeneous.cpp, mofem/tutorials/scl-10/initial_diffusion.cpp, mofem/tutorials/scl-10/photon_diffusion.cpp, mofem/tutorials/scl-11/poisson_2d_dis_galerkin.cpp, mofem/tutorials/scl-12/electrostatics.cpp, mofem/tutorials/scl-6/heat_equation.cpp, mofem/tutorials/scl-9/heat_method.cpp, mofem/tutorials/vec-1/eigen_elastic.cpp, mofem/tutorials/vec-10/schur_elastic.cpp, mofem/tutorials/vec-2/src/HenckyOps.hpp, mofem/tutorials/vec-3/nonlinear_dynamic_elastic.cpp, mofem/tutorials/vec-4/approx_sphere.cpp, mofem/tutorials/vec-5/free_surface.cpp, mofem/tutorials/vec-6/plate.cpp, mofem/tutorials/vec-7/adjoint.cpp, mofem/users_modules/adolc-plasticity/adolc_plasticity.cpp, mofem/users_modules/adolc-plasticity/src/ADOLCPlasticityMaterialModels.hpp, mofem/users_modules/basic_finite_elements/elasticity/elasticity.cpp, mofem/users_modules/basic_finite_elements/nonlinear_elasticity/nonlinear_dynamics.cpp, mofem/users_modules/basic_finite_elements/src/impl/HookeElement.cpp, mofem/users_modules/bone_remodelling/src/impl/Remodeling.cpp, mofem/users_modules/eshelbian_plasticity/src/impl/EshelbianPlasticity.cpp, and mofem/users_modules/minimal_surface_equation/minimal_surface_area.cpp.

getValue()

virtual const int MoFEM::CoreInterface::getValue ( ) const

pure virtual

Get the core.

Returns

int The core value

Implemented in MoFEM::CoreTmp< 0 >, and MoFEM::CoreTmp<-1 >.

make_shared_ref_entity()

virtual boost::shared_ptr< RefEntityTmp< 0 > > MoFEM::CoreInterface::make_shared_ref_entity ( const EntityHandle  ent )

pure virtual

Get RefEntity.

Parameters

ent	Entity handle to create reference entity from

Returns

boost::shared_ptr<RefEntityTmp<0>> Shared pointer to reference entity

Implemented in MoFEM::CoreTmp< 0 >, and MoFEM::CoreTmp<-1 >.

problem_basic_method_preProcess() [1/2]

virtual MoFEMErrorCode MoFEM::CoreInterface::problem_basic_method_preProcess ( const Problem *  problem_ptr, BasicMethod &  method, int  verb = DEFAULT_VERBOSITY  )

pure virtual

Set data for BasicMethod.

This function set data about problem, adjacencies and other multi-indices in database. This function can be used a special case when user need to do some pre- and post-processing before matrix or vector is initiated, or to assemble matrix for group of FEMethods. Is used by classes SnesCtx and TsCtx. Look for more details there.

FIXME: Here we need example

Parameters

pointer	to problem data structure
method	user method derived from BasicMethod

Implemented in MoFEM::CoreTmp< 0 >.

problem_basic_method_preProcess() [2/2]

virtual MoFEMErrorCode MoFEM::CoreInterface::problem_basic_method_preProcess ( const std::string &  problem_name, BasicMethod &  method, int  verb = DEFAULT_VERBOSITY  )

pure virtual

Set data for BasicMethod.

This function set data about problem, adjacencies and other multi-indices in database. This function can be used a special case when user need to do some pre- and post-processing before matrix or vector is initiated, or to assemble matrix for group of FEMethods. Is used by classes SnesCtx and TsCtx. Look for more details there.

FIXME: Here we need example

Parameters

problem_name	name of the problem
method	user method derived from BasicMethod

Implemented in MoFEM::CoreTmp< 0 >.

rebuild_database()

virtual MoFEMErrorCode MoFEM::CoreInterface::rebuild_database ( int  verb = DEFAULT_VERBOSITY )

pure virtual

Clear database and initialize it once again.

Parameters

verb	Verbosity level

Returns

Error code

Implemented in MoFEM::CoreTmp< 0 >.

Examples

mofem/tutorials/cor-10/navier_stokes.cpp, and mofem/tutorials/fun-2/plot_base.cpp.

remove_ents()

virtual MoFEMErrorCode MoFEM::CoreInterface::remove_ents ( const Range  ents, int  verb = DEFAULT_VERBOSITY  )

pure virtual

Remove entities from MoFEM database.

Parameters

ents	Range of entities to remove
verb	Verbosity level (default: DEFAULT_VERBOSITY)

Returns

MoFEMErrorCode Error code indicating success or failure

Implemented in MoFEM::CoreTmp< 0 >.

remove_ents_by_bit_ref()

virtual MoFEMErrorCode MoFEM::CoreInterface::remove_ents_by_bit_ref ( const BitRefLevel  bit, const BitRefLevel  mask, int  verb = DEFAULT_VERBOSITY  )

pure virtual

Remove entities from MoFEM database.

Parameters

bit	Bit level to select entities
mask	Mask for bit level selection
verb	Verbosity level (default: DEFAULT_VERBOSITY)

Returns

MoFEMErrorCode Error code indicating success or failure

Implemented in MoFEM::CoreTmp< 0 >.

remove_ents_from_finite_element()

virtual MoFEMErrorCode MoFEM::CoreInterface::remove_ents_from_finite_element ( const std::string  name, const EntityHandle  meshset, const EntityType  type, int  verb = DEFAULT_VERBOSITY  )

pure virtual

remove entities from given refinement level to finite element database

Implemented in MoFEM::CoreTmp< 0 >.

remove_parents_by_bit_ref()

virtual MoFEMErrorCode MoFEM::CoreInterface::remove_parents_by_bit_ref ( const BitRefLevel  bit, const BitRefLevel  mask, int  verb = DEFAULT_VERBOSITY  )

pure virtual

Remove parent from entities on bit level.

Every entity created by refinement, split, or any other change on the mesh can have a parent. This function removes the parent from an entity.

Note

Functions making topological changes on entities should respect parent–child relations. This erases that relation. If you are going to split faces and create an interface, it is recommended to call this function before the split operation.

Parameters

bit	Bit level to select entities
mask	Mask for bit level selection
verb	Verbosity level (default: DEFAULT_VERBOSITY)

Returns

MoFEMErrorCode Error code indicating success or failure

Implemented in MoFEM::CoreTmp< 0 >.

remove_parents_by_ents()

virtual MoFEMErrorCode MoFEM::CoreInterface::remove_parents_by_ents ( const Range &  ents, int  verb = DEFAULT_VERBOSITY  )

pure virtual

Remove parents from entities.

Parameters

ents	Range of entities to remove parents from
verb	Verbosity level (default: DEFAULT_VERBOSITY)

Returns

MoFEMErrorCode Error code indicating success or failure

Implemented in MoFEM::CoreTmp< 0 >.

remove_parents_by_parents()

virtual MoFEMErrorCode MoFEM::CoreInterface::remove_parents_by_parents ( const Range &  ents, int  verb = DEFAULT_VERBOSITY  )

pure virtual

Remove parents from entities having parents in passed range.

Parameters

ents	Range of parent entities to check against
verb	Verbosity level (default: DEFAULT_VERBOSITY)

Returns

MoFEMErrorCode Error code indicating success or failure

Implemented in MoFEM::CoreTmp< 0 >.

set_moab_interface()

virtual MoFEMErrorCode MoFEM::CoreInterface::set_moab_interface ( moab::Interface &  new_moab, int  verb = VERBOSE  )

pure virtual

Set the moab interface object.

Parameters

new_moab	Reference to new MOAB interface to set
verb	Verbosity level (default: VERBOSE)

Returns

MoFEMErrorCode Error code indicating success or failure

Implemented in MoFEM::CoreTmp< 0 >, and MoFEM::CoreTmp<-1 >.

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The documentation for this struct was generated from the following file:

• src/interfaces/Interface.hpp