MoFEM::CoreTmp<-1 > Struct Reference

#include "src/interfaces/Core.hpp"

Inheritance diagram for MoFEM::CoreTmp<-1 >:

Collaboration diagram for MoFEM::CoreTmp<-1 >:

Public Member Functions
const int	getValue () const
	Get the core.
virtual boost::shared_ptr< RefEntityTmp< 0 > >	make_shared_ref_entity (const EntityHandle ent)
	Get RefEntity.
	CoreTmp (moab::Interface &moab, MPI_Comm comm=PETSC_COMM_WORLD, const int verbose=VERBOSE)
virtual MoFEMErrorCode	set_moab_interface (moab::Interface &new_moab, int verb=VERBOSE)
	Set the moab interface object.
Public Member Functions inherited from MoFEM::CoreTmp< 0 >
RefEntityTmp< 0 >	getRefEntity (const EntityHandle ent)
	CoreTmp (moab::Interface &moab, MPI_Comm comm=PETSC_COMM_WORLD, const int verbose=VERBOSE)
	~CoreTmp ()
int &	getBuildMoFEM () const
	Get flags/semaphores for different stages.
MoFEMErrorCode	addPrismToDatabase (const EntityHandle prism, int verb=DEFAULT_VERBOSITY)
	add prim element
MoFEMErrorCode	query_interface (boost::typeindex::type_index type_index, UnknownInterface **iface) const
	Getting interface of core database.
Tag	get_th_RefParentHandle () const
Tag	get_th_RefBitLevel () const
Tag	get_th_RefBitEdge () const
Public Member Functions inherited from MoFEM::DeprecatedCoreInterface
virtual DEPRECATED MoFEMErrorCode	seed_ref_level_2D (const EntityHandle meshset, const BitRefLevel &bit, int verb=-1)
	seed 2D entities (Triangles entities only) in the meshset and their adjacencies (only TRIs adjacencies) in a particular BitRefLevel
DEPRECATED MoFEMErrorCode	seed_ref_level_3D (const EntityHandle meshset, const BitRefLevel &bit, int verb=-1)
	seed 2D entities in the meshset and their adjacencies (only TETs adjacencies) in a particular BitRefLevel
DEPRECATED MoFEMErrorCode	seed_ref_level (const Range &ents, const BitRefLevel &bit, const bool only_tets=true, int verb=-1)
	seed entities in the range and their adjacencies in a particular BitRefLevel
DEPRECATED MoFEMErrorCode	partition_mesh (const Range &ents, const int dim, const int adj_dim, const int n_parts, int verb=-1)
	Set partition tag to each finite element in the problem.
DEPRECATED MoFEMErrorCode	synchronise_entities (Range &ent, int verb=DEFAULT_VERBOSITY)
DEPRECATED MoFEMErrorCode	synchronise_field_entities (const std::string &name, int verb=DEFAULT_VERBOSITY)
Public Member Functions inherited from MoFEM::CoreInterface
virtual	~CoreInterface ()=default
virtual MoFEMErrorCode	add_broken_field (const std::string name, const FieldSpace space, const FieldApproximationBase base, const FieldCoefficientsNumber nb_of_coefficients, const std::vector< std::pair< EntityType, std::function< MoFEMErrorCode(BaseFunction::DofsSideMap &)> > > list_dof_side_map, const TagType tag_type=MB_TAG_SPARSE, const enum MoFEMTypes bh=MF_EXCL, int verb=DEFAULT_VERBOSITY)=0
	Add field.
Public Member Functions inherited from MoFEM::UnknownInterface
template<class IFACE >
MoFEMErrorCode	registerInterface (bool error_if_registration_failed=true)
	Register interface.
template<class IFACE >
MoFEMErrorCode	getInterface (IFACE *&iface) const
	Get interface reference to pointer of interface.
template<class IFACE >
MoFEMErrorCode	getInterface (IFACE **const iface) const
	Get interface pointer to pointer of interface.
template<class IFACE , typename boost::enable_if< boost::is_pointer< IFACE >, int >::type = 0>
IFACE	getInterface () const
	Get interface pointer to pointer of interface.
template<class IFACE , typename boost::enable_if< boost::is_reference< IFACE >, int >::type = 0>
IFACE	getInterface () const
	Get reference to interface.
template<class IFACE >
IFACE *	getInterface () const
	Function returning pointer to interface.
virtual	~UnknownInterface ()=default

Static Public Attributes
static constexpr const int	value = -1
Static Public Attributes inherited from MoFEM::CoreTmp< 0 >
static constexpr int	value = 0

Additional Inherited Members
Public Types inherited from MoFEM::CoreTmp< 0 >
enum	SemaphoresBuildMofem {   BUILD_FIELD = 1 << 0 , BUILD_FE = 1 << 1 , BUILD_ADJ = 1 << 2 , BUILD_PROBLEM = 1 << 3 ,   PARTITION_PROBLEM = 1 << 4 , PARTITION_FE = 1 << 5 , PARTITION_GHOST_DOFS = 1 << 6 , PARTITION_MESH = 1 << 7 }
Static Public Member Functions inherited from MoFEM::CoreTmp< 0 >
static MoFEMErrorCode	Initialize (int *argc, char ***args, const char file[], const char help[])
	Initializes the MoFEM database PETSc, MOAB and MPI.
static MoFEMErrorCode	Finalize ()
	Checks for options to be called at the conclusion of the program.
static void	setRefEntBasicDataPtr (MoFEM::Interface &m_field, boost::shared_ptr< BasicEntityData > &ptr)
static boost::shared_ptr< RefEntityTmp< 0 > >	makeSharedRefEntity (MoFEM::Interface &m_field, const EntityHandle ent)
Static Public Member Functions inherited from MoFEM::UnknownInterface
static MoFEMErrorCode	getLibVersion (Version &version)
	Get library version.
static MoFEMErrorCode	getFileVersion (moab::Interface &moab, Version &version)
	Get database major version.
static MoFEMErrorCode	setFileVersion (moab::Interface &moab, Version version=Version(MoFEM_VERSION_MAJOR, MoFEM_VERSION_MINOR, MoFEM_VERSION_BUILD))
	Get database major version.
static MoFEMErrorCode	getInterfaceVersion (Version &version)
	Get database major version.
Protected Member Functions inherited from MoFEM::CoreTmp< 0 >
template<int V>
	CoreTmp (moab::Interface &moab, MPI_Comm comm, const int verbose, CoreValue< V >)
MoFEMErrorCode	coreGenericConstructor (moab::Interface &moab, MPI_Comm comm, const int verbose)
MoFEMErrorCode	addProblem (const BitProblemId id, const std::string &name, int verb=DEFAULT_VERBOSITY)
	add problem
MoFEMErrorCode	getTags (int verb=DEFAULT_VERBOSITY)
	Get tag handles.
MoFEMErrorCode	clearMap ()
	Cleaning database.
MoFEMErrorCode	registerSubInterfaces ()
	Register insterfaces.
BitProblemId	getProblemShift ()
	Return unique problem Id.
MoFEMErrorCode	initialiseDatabaseFromMesh (int verb=DEFAULT_VERBOSITY)
	Initialize database getting information on mesh.
MoFEMErrorCode	getOptions (int verb=DEFAULT_VERBOSITY)
	Get core options from command line.
template<class IFACE >
MoFEMErrorCode	regSubInterface ()
	Register sub-interfaces in core interface.
template<class IFACE >
MoFEMErrorCode	regEvents ()
	Register petsc events.
boost::shared_ptr< BasicEntityData > &	get_basic_entity_data_ptr ()
	Get pointer to basic entity data.
moab::Interface &	get_moab ()
const moab::Interface &	get_moab () const
MoFEMErrorCode	setMoabInterface (moab::Interface &new_moab, int verb=VERBOSE)
MPI_Comm &	get_comm () const
int	get_comm_size () const
int	get_comm_rank () const
MoFEMErrorCode	check_number_of_ents_in_ents_field (const std::string &name) const
	check data consistency in entitiesPtr
MoFEMErrorCode	check_number_of_ents_in_ents_field () const
	check data consistency in entitiesPtr
MoFEMErrorCode	check_number_of_ents_in_ents_finite_element (const std::string &name) const
	check data consistency in entsFiniteElements
MoFEMErrorCode	check_number_of_ents_in_ents_finite_element () const
	check data consistency in entsFiniteElements
MoFEMErrorCode	clear_database (int verb=DEFAULT_VERBOSITY)
	Clear database.
MoFEMErrorCode	rebuild_database (int verb=DEFAULT_VERBOSITY)
	Clear database and initialize it once again.
MeshsetsManager *	get_meshsets_manager_ptr ()
	get MeshsetsManager pointer
const MeshsetsManager *	get_meshsets_manager_ptr () const
	get MeshsetsManager pointer
MeshsetsManager &	get_meshsets_manager ()
	get MeshsetsManager reference
const MeshsetsManager &	get_meshsets_manager () const
	get MeshsetsManager reference
MoFEMErrorCode	remove_parents_by_ents (const Range &ents, int verb=DEFAULT_VERBOSITY)
	Remove parents from entities.
MoFEMErrorCode	remove_parents_by_bit_ref (const BitRefLevel bit, const BitRefLevel mask, int verb=DEFAULT_VERBOSITY)
	Remove parent from entities on bit level.
MoFEMErrorCode	remove_parents_by_parents (const Range &ents, int verb=DEFAULT_VERBOSITY)
	Remove parents from entities having parents in passed range.
MoFEMErrorCode	remove_ents (const Range ents, int verb=DEFAULT_VERBOSITY)
	Remove entities from MoFEM database.
MoFEMErrorCode	remove_ents_by_bit_ref (const BitRefLevel bit, const BitRefLevel mask, int verb=DEFAULT_VERBOSITY)
	Remove entities from MoFEM database.
MoFEMErrorCode	delete_ents_by_bit_ref (const BitRefLevel bit, const BitRefLevel mask, const bool remove_parent=false, int verb=DEFAULT_VERBOSITY, MoFEMTypes mf=MF_ZERO)
	Delete entities from MoFEM and MOAB database.
virtual MoFEMErrorCode	add_broken_field (const std::string name, const FieldSpace space, const FieldApproximationBase base, const FieldCoefficientsNumber nb_coefficients, std::vector< std::pair< EntityType, std::function< MoFEMErrorCode(BaseFunction::DofsSideMap &)> > > list_dof_side_map, const TagType tag_type=MB_TAG_SPARSE, const enum MoFEMTypes bh=MF_EXCL, int verb=DEFAULT_VERBOSITY)
	Add field.
virtual MoFEMErrorCode	add_field (const std::string name, const FieldSpace space, const FieldApproximationBase base, const FieldCoefficientsNumber nb_coefficients, const TagType tag_type=MB_TAG_SPARSE, const enum MoFEMTypes bh=MF_EXCL, int verb=DEFAULT_VERBOSITY)
	Add field.
MoFEMErrorCode	delete_field (const std::string name, int verb=DEFAULT_VERBOSITY)
	Delete field.
MoFEMErrorCode	addField (const std::string &name, const FieldSpace space, const FieldContinuity continuity, const FieldApproximationBase base, const FieldCoefficientsNumber nb_coefficients, const TagType tag_type, const enum MoFEMTypes bh, int verb)
	Template for add_field.
MoFEMErrorCode	addEntsToFieldByDim (const Range &ents, const int dim, const std::string &name, int verb=DEFAULT_VERBOSITY)
MoFEMErrorCode	add_ents_to_field_by_dim (const Range &ents, const int dim, const std::string &name, int verb=DEFAULT_VERBOSITY)
	Add entities to field meshset.
MoFEMErrorCode	add_ents_to_field_by_type (const Range &ents, const EntityType type, const std::string &name, int verb=DEFAULT_VERBOSITY)
	Add entities to field meshset.
MoFEMErrorCode	add_ents_to_field_by_dim (const EntityHandle meshset, const int dim, const std::string &name, const bool recursive=true, int verb=DEFAULT_VERBOSITY)
	Add entities to field meshset.
MoFEMErrorCode	add_ents_to_field_by_type (const EntityHandle meshset, const EntityType type, const std::string &name, const bool recursive=true, int verb=DEFAULT_VERBOSITY)
	Add entities to field meshset.
MoFEMErrorCode	create_vertices_and_add_to_field (const std::string name, const double coords[], int size, int verb=DEFAULT_VERBOSITY)
	Create vertices and add to the field object.
MoFEMErrorCode	setFieldOrder (const Range &ents, const BitFieldId id, const ApproximationOrder order, int ver)
MoFEMErrorCode	setFieldOrderImpl (boost::shared_ptr< Field > field_ptr, const Range &ents, const ApproximationOrder order, int verb)
MoFEMErrorCode	set_field_order (const Range &ents, const BitFieldId id, const ApproximationOrder order, int verb=DEFAULT_VERBOSITY)
MoFEMErrorCode	set_field_order (const EntityHandle meshset, const EntityType type, const BitFieldId id, const ApproximationOrder order, int verb=DEFAULT_VERBOSITY)
MoFEMErrorCode	set_field_order (const Range &ents, const std::string &name, const ApproximationOrder order, int verb=DEFAULT_VERBOSITY)
	Set order approximation of the entities in the field.
MoFEMErrorCode	set_field_order (const EntityHandle meshset, const EntityType type, const std::string &name, const ApproximationOrder order, int verb=DEFAULT_VERBOSITY)
	Set order approximation of the entities in the field.
MoFEMErrorCode	set_field_order_by_entity_type_and_bit_ref (const BitRefLevel &bit, const BitRefLevel &mask, const EntityType type, const BitFieldId id, const ApproximationOrder order, int verb=DEFAULT_VERBOSITY)
MoFEMErrorCode	set_field_order_by_entity_type_and_bit_ref (const BitRefLevel &bit, const BitRefLevel &mask, const EntityType type, const std::string &name, const ApproximationOrder order, int verb=DEFAULT_VERBOSITY)
	Set order approximation of the entities in the field.
MoFEMErrorCode	buildFieldForNoFieldImpl (boost::shared_ptr< Field > field_ptr, std::map< EntityType, int > &dof_counter, int verb)
MoFEMErrorCode	buildFieldForNoField (const BitFieldId id, std::map< EntityType, int > &dof_counter, int verb=DEFAULT_VERBOSITY)
MoFEMErrorCode	buildFieldForL2H1HcurlHdiv (const BitFieldId id, std::map< EntityType, int > &dof_counter, std::map< EntityType, int > &inactive_dof_counter, int verb=DEFAULT_VERBOSITY)
MoFEMErrorCode	buildField (const boost::shared_ptr< Field > &field, int verb=DEFAULT_VERBOSITY)
MoFEMErrorCode	build_fields (int verb=DEFAULT_VERBOSITY)
MoFEMErrorCode	build_field (const std::string field_name, int verb=DEFAULT_VERBOSITY)
	build field by name
MoFEMErrorCode	clear_inactive_dofs (int verb=DEFAULT_VERBOSITY)
MoFEMErrorCode	clear_dofs_fields_by_bit_ref (const BitRefLevel bit, const BitRefLevel mask, int verb=DEFAULT_VERBOSITY)
MoFEMErrorCode	clear_dofs_fields (const Range ents, int verb=DEFAULT_VERBOSITY)
MoFEMErrorCode	clear_dofs_fields (const std::string name, const Range ents, int verb=DEFAULT_VERBOSITY)
MoFEMErrorCode	clear_ents_fields_by_bit_ref (const BitRefLevel bit, const BitRefLevel mask, int verb=DEFAULT_VERBOSITY)
MoFEMErrorCode	clear_ents_fields (const Range ents, int verb=DEFAULT_VERBOSITY)
MoFEMErrorCode	clear_ents_fields (const std::string name, const Range ents, int verb=DEFAULT_VERBOSITY)
MoFEMErrorCode	remove_ents_from_field_by_bit_ref (const BitRefLevel bit, const BitRefLevel mask, int verb=DEFAULT_VERBOSITY)
	remove entities from field
MoFEMErrorCode	remove_ents_from_field (const std::string name, const EntityHandle meshset, const EntityType type, int verb=DEFAULT_VERBOSITY)
	remove entities from field
MoFEMErrorCode	remove_ents_from_field (const std::string name, const Range ents, int verb=DEFAULT_VERBOSITY)
	remove entities from field
MoFEMErrorCode	remove_ents_from_field (const Range ents, int verb=DEFAULT_VERBOSITY)
	remove entities from all fields
MoFEMErrorCode	list_dofs_by_field_name (const std::string &name) const
MoFEMErrorCode	list_fields () const
	list entities in the field
BitFieldId	get_field_id (const std::string &name) const
	Get field Id.
FieldBitNumber	get_field_bit_number (const std::string name) const
	get field bit number
std::string	get_field_name (const BitFieldId id) const
	get field name from id
EntityHandle	get_field_meshset (const BitFieldId id) const
EntityHandle	get_field_meshset (const std::string name) const
	get field meshset
MoFEMErrorCode	get_field_entities_by_dimension (const std::string name, int dim, Range &ents) const
	get entities in the field by dimension
MoFEMErrorCode	get_field_entities_by_type (const std::string name, EntityType type, Range &ents) const
	get entities in the field by type
MoFEMErrorCode	get_field_entities_by_handle (const std::string name, Range &ents) const
	get entities in the field by handle
bool	check_field (const std::string &name) const
	check if field is in database
const Field *	get_field_structure (const std::string &name, enum MoFEMTypes bh=MF_EXIST) const
	get field structure
const FiniteElement *	get_finite_element_structure (const std::string &name, enum MoFEMTypes bh=MF_EXCL) const
	get finite element structure
bool	check_finite_element (const std::string &name) const
	Check if finite element is in database.
MoFEMErrorCode	add_finite_element (const std::string &fe_name, enum MoFEMTypes bh=MF_EXCL, int verb=DEFAULT_VERBOSITY)
	add finite element
MoFEMErrorCode	modify_finite_element_adjacency_table (const std::string &fe_name, const EntityType type, ElementAdjacencyFunct function)
	modify finite element table, only for advanced user
MoFEMErrorCode	modify_finite_element_add_field_data (const std::string &fe_name, const std::string name_filed)
	set finite element field data
MoFEMErrorCode	modify_finite_element_add_field_row (const std::string &fe_name, const std::string name_row)
	set field row which finite element use
MoFEMErrorCode	modify_finite_element_add_field_col (const std::string &fe_name, const std::string name_col)
	set field col which finite element use
MoFEMErrorCode	modify_finite_element_off_field_data (const std::string &fe_name, const std::string name_filed)
	unset finite element field data
MoFEMErrorCode	modify_finite_element_off_field_row (const std::string &fe_name, const std::string name_row)
	unset field row which finite element use
MoFEMErrorCode	modify_finite_element_off_field_col (const std::string &fe_name, const std::string name_col)
	unset field col which finite element use
MoFEMErrorCode	add_ents_to_finite_element_by_type (const EntityHandle meshset, const EntityType type, const std::string name, const bool recursive=true)
	add entities to finite element
MoFEMErrorCode	add_ents_to_finite_element_by_dim (const EntityHandle meshset, const int dim, const std::string name, const bool recursive=true)
	add entities to finite element
MoFEMErrorCode	add_ents_to_finite_element_by_type (const Range ents, const EntityType type, const std::string name)
	add entities to finite elements
MoFEMErrorCode	add_ents_to_finite_element_by_dim (const Range ents, const int dim, const std::string name)
	add entities to finite elements
MoFEMErrorCode	add_ents_to_finite_element_by_bit_ref (const BitRefLevel bit, const BitRefLevel mask, const std::string name, EntityType type, int verb=DEFAULT_VERBOSITY)
	add TET entities from given refinement level to finite element database given by name
MoFEMErrorCode	add_ents_to_finite_element_by_MESHSET (const EntityHandle meshset, const std::string &name, const bool recursive=false)
	add MESHSET element to finite element database given by name
DEPRECATED MoFEMErrorCode	add_ents_to_finite_element_EntType_by_bit_ref (const BitRefLevel &bit, const std::string &name, EntityType type, int verb=DEFAULT_VERBOSITY)
DEPRECATED MoFEMErrorCode	add_ents_to_finite_element_EntType_by_bit_ref (const BitRefLevel &bit, const BitRefLevel &mask, const std::string &name, EntityType type, int verb=DEFAULT_VERBOSITY)
MoFEMErrorCode	remove_ents_from_finite_element_by_bit_ref (const BitRefLevel bit, const BitRefLevel mask, int verb=DEFAULT_VERBOSITY)
	remove elements from given refinement level to finite element database
MoFEMErrorCode	remove_ents_from_finite_element (const std::string name, const EntityHandle meshset, const EntityType type, int verb=DEFAULT_VERBOSITY)
	remove entities from given refinement level to finite element database
MoFEMErrorCode	remove_ents_from_finite_element (const std::string name, const Range ents, int verb=DEFAULT_VERBOSITY)
	remove entities from finite element database
MoFEMErrorCode	remove_ents_from_finite_element (const Range ents, int verb=DEFAULT_VERBOSITY)
	remove entities from finite elements in database
MoFEMErrorCode	delete_finite_element (const std::string name, int verb=DEFAULT_VERBOSITY)
	Delete finite element from MoFEM database.
BitFEId	getBitFEId (const std::string &fe_name) const
	Get field Id.
std::string	getBitFEIdName (const BitFEId id) const
	Get field name.
EntityHandle	get_finite_element_meshset (const BitFEId id) const
EntityHandle	get_finite_element_meshset (const std::string name) const
MoFEMErrorCode	get_finite_element_entities_by_dimension (const std::string name, int dim, Range &ents) const
	get entities in the finite element by dimension
MoFEMErrorCode	get_finite_element_entities_by_type (const std::string name, EntityType type, Range &ents) const
	get entities in the finite element by type
MoFEMErrorCode	get_finite_element_entities_by_handle (const std::string name, Range &ents) const
	get entities in the finite element by handle
MoFEMErrorCode	list_finite_elements () const
	list finite elements in database
MoFEMErrorCode	add_problem (const std::string &name, enum MoFEMTypes bh=MF_EXCL, int verb=DEFAULT_VERBOSITY)
	Add problem.
bool	check_problem (const std::string name)
	check if problem exist
MoFEMErrorCode	delete_problem (const std::string name)
	Delete problem.
MoFEMErrorCode	modify_problem_add_finite_element (const std::string name_problem, const std::string &fe_name)
	add finite element to problem, this add entities assigned to finite element to a particular problem
MoFEMErrorCode	modify_problem_unset_finite_element (const std::string name_problem, const std::string &fe_name)
	unset finite element from problem, this remove entities assigned to finite element to a particular problem
MoFEMErrorCode	modify_problem_ref_level_add_bit (const std::string &name_problem, const BitRefLevel &bit)
	add ref level to problem
MoFEMErrorCode	modify_problem_ref_level_set_bit (const std::string &name_problem, const BitRefLevel &bit)
	set ref level for problem
MoFEMErrorCode	modify_problem_mask_ref_level_add_bit (const std::string &name_problem, const BitRefLevel &bit)
	set dof mask ref level for problem
MoFEMErrorCode	modify_problem_mask_ref_level_set_bit (const std::string &name_problem, const BitRefLevel &bit)
	set dof mask ref level for problem
BitProblemId	getBitProblemId (const std::string &name) const
MoFEMErrorCode	list_problem () const
	list problems
MoFEMErrorCode	clear_problem (const std::string name, int verb=DEFAULT_VERBOSITY)
	clear problem
MoFEMErrorCode	clear_problems (int verb=DEFAULT_VERBOSITY)
	clear problems
MoFEMErrorCode	build_finite_elements (int verb=DEFAULT_VERBOSITY)
	Build finite elements.
MoFEMErrorCode	build_finite_elements (const BitRefLevel &bit, int verb=DEFAULT_VERBOSITY)
MoFEMErrorCode	build_finite_elements (const string fe_name, const Range *const ents_ptr=nullptr, int verb=DEFAULT_VERBOSITY)
	Build finite elements.
MoFEMErrorCode	buildFiniteElements (const boost::shared_ptr< FiniteElement > &fe, const Range *ents_ptr=NULL, int verb=DEFAULT_VERBOSITY)
MoFEMErrorCode	clear_finite_elements_by_bit_ref (const BitRefLevel bit, const BitRefLevel mask, int verb=DEFAULT_VERBOSITY)
MoFEMErrorCode	clear_finite_elements (const Range &ents, int verb=DEFAULT_VERBOSITY)
MoFEMErrorCode	clear_finite_elements (const std::string &fe_name, const Range &ents, int verb=DEFAULT_VERBOSITY)
MoFEMErrorCode	get_problem_finite_elements_entities (const std::string name, const std::string &fe_name, const EntityHandle meshset)
	add finite elements to the meshset
DEPRECATED MoFEMErrorCode	build_problem_on_distributed_mesh (int verb=DEFAULT_VERBOSITY)
DEPRECATED MoFEMErrorCode	build_problems (int verb=DEFAULT_VERBOSITY)
MoFEMErrorCode	build_adjacencies (const Range &ents, int verb=DEFAULT_VERBOSITY)
	build adjacencies
MoFEMErrorCode	build_adjacencies (const BitRefLevel &bit, int verb=DEFAULT_VERBOSITY)
	build adjacencies
MoFEMErrorCode	build_adjacencies (const BitRefLevel &bit, const BitRefLevel &mask, int verb=DEFAULT_VERBOSITY)
	build adjacencies
MoFEMErrorCode	clear_adjacencies_entities (const BitRefLevel bit, const BitRefLevel mask, int verb=DEFAULT_VERBOSITY)
	clear adjacency map for entities on given bit level
MoFEMErrorCode	clear_adjacencies_entities (const Range ents, int verb=DEFAULT_VERBOSITY)
	clear adjacencies for field entities by entities
MoFEMErrorCode	clear_adjacencies_entities (const std::string name, const Range ents, int verb=DEFAULT_VERBOSITY)
	clear adjacencies for field entities by entities and field namd
MoFEMErrorCode	clear_adjacencies_finite_elements (const BitRefLevel bit, const BitRefLevel mask, int verb=DEFAULT_VERBOSITY)
	clear adjacency map for finite elements on given bit level
MoFEMErrorCode	clear_adjacencies_finite_elements (const Range ents, int verb=DEFAULT_VERBOSITY)
MoFEMErrorCode	clear_adjacencies_finite_elements (const std::string name, const Range ents, int verb=DEFAULT_VERBOSITY)
MoFEMErrorCode	problem_basic_method_preProcess (const Problem *problem_ptr, BasicMethod &method, int verb=DEFAULT_VERBOSITY)
	Set data for BasicMethod.
MoFEMErrorCode	problem_basic_method_preProcess (const std::string &problem_name, BasicMethod &method, int verb=DEFAULT_VERBOSITY)
	Set data for BasicMethod.
MoFEMErrorCode	problem_basic_method_postProcess (const Problem *problem_ptr, BasicMethod &method, int verb=DEFAULT_VERBOSITY)
	Set data for BasicMethod.
MoFEMErrorCode	problem_basic_method_postProcess (const std::string &problem_name, BasicMethod &method, int verb=DEFAULT_VERBOSITY)
	Set data for BasicMethod.
MoFEMErrorCode	cache_problem_entities (const std::string prb_name, CacheTupleWeakPtr cache_ptr)
	Cache variables.
MoFEMErrorCode	loop_finite_elements (const Problem *problem_ptr, const std::string &fe_name, FEMethod &method, int lower_rank, int upper_rank, boost::shared_ptr< NumeredEntFiniteElement_multiIndex > fe_ptr=nullptr, MoFEMTypes bh=MF_EXIST, CacheTupleWeakPtr cache_ptr=CacheTupleSharedPtr(), int verb=DEFAULT_VERBOSITY)
	Make a loop over finite elements on partitions from upper to lower rank.
MoFEMErrorCode	loop_finite_elements (const std::string problem_name, const std::string &fe_name, FEMethod &method, int lower_rank, int upper_rank, boost::shared_ptr< NumeredEntFiniteElement_multiIndex > fe_ptr=nullptr, MoFEMTypes bh=MF_EXIST, CacheTupleWeakPtr cache_ptr=CacheTupleSharedPtr(), int verb=DEFAULT_VERBOSITY)
	Make a loop over finite elements on partitions from upper to lower rank.
MoFEMErrorCode	loop_finite_elements (const std::string problem_name, const std::string &fe_name, FEMethod &method, boost::shared_ptr< NumeredEntFiniteElement_multiIndex > fe_ptr=nullptr, MoFEMTypes bh=MF_EXIST, CacheTupleWeakPtr cache_ptr=CacheTupleSharedPtr(), int verb=DEFAULT_VERBOSITY)
	Make a loop over finite elements.
MoFEMErrorCode	loop_dofs (const Problem *problem_ptr, const std::string &field_name, RowColData rc, DofMethod &method, int lower_rank, int upper_rank, int verb=DEFAULT_VERBOSITY)
	Make a loop over dofs.
MoFEMErrorCode	loop_dofs (const std::string &problem_name, const std::string &field_name, RowColData rc, DofMethod &method, int lower_rank, int upper_rank, int verb=DEFAULT_VERBOSITY)
	Make a loop over dofs.
MoFEMErrorCode	loop_dofs (const std::string &problem_name, const std::string &field_name, RowColData rc, DofMethod &method, int verb=DEFAULT_VERBOSITY)
	Make a loop over dofs.
MoFEMErrorCode	loop_dofs (const std::string &field_name, DofMethod &method, int verb=DEFAULT_VERBOSITY)
	Make a loop over dofs.
MoFEMErrorCode	loop_entities (const Problem *problem_ptr, const std::string field_name, RowColData rc, EntityMethod &method, int lower_rank, int upper_rank, int verb=DEFAULT_VERBOSITY)
	Loop over field entities in the problem.
MoFEMErrorCode	loop_entities (const std::string problem_name, const std::string field_name, RowColData rc, EntityMethod &method, int lower_rank, int upper_rank, int verb=DEFAULT_VERBOSITY)
	Loop over field entities in the problem.
MoFEMErrorCode	loop_entities (const std::string problem_name, const std::string field_name, RowColData rc, EntityMethod &method, int verb=DEFAULT_VERBOSITY)
	Loop over field entities in the problem.
MoFEMErrorCode	loop_entities (const std::string field_name, EntityMethod &method, Range const *const ents=nullptr, int verb=DEFAULT_VERBOSITY)
	Loop over field entities.
MoFEMErrorCode	get_fields (const Field_multiIndex **fields_ptr) const
	Get fields multi-index from database.
MoFEMErrorCode	get_ref_ents (const RefEntity_multiIndex **refined_entities_ptr) const
	Get ref entities multi-index from database.
MoFEMErrorCode	get_ref_finite_elements (const RefElement_multiIndex **refined_finite_elements_ptr) const
	Get ref finite elements multi-index form database.
MoFEMErrorCode	get_finite_elements (const FiniteElement_multiIndex **fe_ptr) const
	Get finite elements multi-index.
MoFEMErrorCode	get_ents_finite_elements (const EntFiniteElement_multiIndex **fe_ent_ptr) const
	Get entities finite elements multi-index.
MoFEMErrorCode	get_field_ents (const FieldEntity_multiIndex **field_ents) const
	Get field multi index.
MoFEMErrorCode	get_dofs (const DofEntity_multiIndex **dofs_ptr) const
	Get dofs multi index.
MoFEMErrorCode	get_problem (const std::string &problem_name, const Problem **problem_ptr) const
	Get problem database (data structure)
MoFEMErrorCode	get_problems (const Problem_multiIndex **problems_ptr) const
	Get pointer to problems multi-index.
MoFEMErrorCode	get_ents_elements_adjacency (const FieldEntityEntFiniteElementAdjacencyMap_multiIndex **dofs_elements_adjacency) const
	Get the dofs elements adjacency object.
const Field_multiIndex *	get_fields () const
	Get the fields object.
const RefEntity_multiIndex *	get_ref_ents () const
	Get the ref ents object.
const RefElement_multiIndex *	get_ref_finite_elements () const
	Get the ref finite elements object.
const FiniteElement_multiIndex *	get_finite_elements () const
	Get the finite elements object.
const EntFiniteElement_multiIndex *	get_ents_finite_elements () const
	Get the ents finite elements object.
const FieldEntity_multiIndex *	get_field_ents () const
	Get the field ents object.
const DofEntity_multiIndex *	get_dofs () const
	Get the dofs object.
const Problem *	get_problem (const std::string problem_name) const
	Get the problem object.
const Problem_multiIndex *	get_problems () const
	Get the problems object.
const FieldEntityEntFiniteElementAdjacencyMap_multiIndex *	get_ents_elements_adjacency () const
	Get the dofs elements adjacency object.
FieldEntityByUId::iterator	get_ent_field_by_name_begin (const std::string &field_name) const
	get begin iterator of field ents of given name (instead you can use IT_GET_ENT_FIELD_BY_NAME_FOR_LOOP(MFIELD,NAME,IT)
FieldEntityByUId::iterator	get_ent_field_by_name_end (const std::string &field_name) const
	get end iterator of field ents of given name (instead you can use IT_GET_ENT_FIELD_BY_NAME_FOR_LOOP(MFIELD,NAME,IT)
DofEntityByUId::iterator	get_dofs_by_name_begin (const std::string &field_name) const
	get begin iterator of field dofs of given name (instead you can use IT_GET_DOFS_FIELD_BY_NAME_FOR_LOOP(MFIELD,NAME,IT)
DofEntityByUId::iterator	get_dofs_by_name_end (const std::string &field_name) const
	get begin iterator of field dofs of given name (instead you can use IT_GET_DOFS_FIELD_BY_NAME_FOR_LOOP(MFIELD,NAME,IT)
DofEntityByUId::iterator	get_dofs_by_name_and_ent_begin (const std::string &field_name, const EntityHandle ent) const
	get begin iterator of field dofs of given name and ent(instead you can use IT_GET_DOFS_FIELD_BY_NAME_FOR_LOOP(MFIELD,NAME,ENT,IT)
DofEntityByUId::iterator	get_dofs_by_name_and_ent_end (const std::string &field_name, const EntityHandle ent) const
	get end iterator of field dofs of given name and ent (instead you can use IT_GET_DOFS_FIELD_BY_NAME_FOR_LOOP(MFIELD,NAME,ENT,IT)
DofEntityByUId::iterator	get_dofs_by_name_and_type_begin (const std::string &field_name, const EntityType type) const
	get begin iterator of field dofs of given name and ent type (instead you can use IT_GET_DOFS_FIELD_BY_NAME_FOR_LOOP(MFIELD,NAME,TYPE,IT)
DofEntityByUId::iterator	get_dofs_by_name_and_type_end (const std::string &field_name, const EntityType ent) const
	get end iterator of field dofs of given name and ent type(instead you can use IT_GET_DOFS_FIELD_BY_NAME_FOR_LOOP(MFIELD,NAME,TYPE,IT)
EntFiniteElement_multiIndex::index< Unique_mi_tag >::type::iterator	get_fe_by_name_begin (const std::string &fe_name) const
	get begin iterator of finite elements of given name (instead you can use IT_GET_FES_BY_NAME_FOR_LOOP(MFIELD,NAME,IT)
EntFiniteElement_multiIndex::index< Unique_mi_tag >::type::iterator	get_fe_by_name_end (const std::string &fe_name) const
	get end iterator of finite elements of given name (instead you can use IT_GET_FES_BY_NAME_FOR_LOOP(MFIELD,NAME,IT)
Protected Attributes inherited from MoFEM::CoreTmp< 0 >
boost::shared_ptr< WrapMPIComm >	wrapMPIMOABComm
	manage creation and destruction of MOAB communicator
int	verbose
	Verbosity level.
boost::ptr_map< boost::typeindex::type_index, UnknownInterface >	iFaces
	Hash map of pointers to interfaces.
int *	buildMoFEM
	keeps flags/semaphores for different stages
std::string	optionsPrefix
	Prefix for options on command line.
PetscBool	initaliseAndBuildField
PetscBool	initaliseAndBuildFiniteElements
Tag	th_Part
	Tag for partition number.
Tag	th_RefParentHandle
Tag	th_RefBitLevel
Tag	th_RefBitLevel_Mask
Tag	th_RefBitEdge
Tag	th_RefFEMeshset
Tag	th_FieldId
Tag	th_FieldName
Tag	th_FieldName_DataNamePrefix
Tag	th_FieldSpace
Tag	th_FieldContinuity
Tag	th_FieldBase
Tag	th_FEId
Tag	th_FEName
Tag	th_FEIdCol
Tag	th_FEIdRow
Tag	th_FEIdData
Tag	th_ProblemId
Tag	th_ProblemName
Tag	th_ProblemFEId
Tag	th_ProblemNbDofsRow
Tag	th_ProblemNbDofsCol
Tag	th_ProblemLocalNbDofRow
Tag	th_ProblemGhostNbDofRow
Tag	th_ProblemLocalNbDofCol
Tag	th_ProblemGhostNbDofCol
Tag	th_ProblemShift
Tag	th_ElemType
	Needed for VTK files.
Tag	th_MoFEMBuild
boost::shared_ptr< BasicEntityData >	basicEntityDataPtr
RefEntity_multiIndex	refinedEntities
	refined entities
RefElement_multiIndex	refinedFiniteElements
	refined elements
Field_multiIndex	fIelds
	fields
FieldEntity_multiIndex	entsFields
	entities on fields
DofEntity_multiIndex	dofsField
	dofs on fields
FiniteElement_multiIndex	finiteElements
	finite elements
EntFiniteElement_multiIndex	entsFiniteElements
	finite element entities
FieldEntityEntFiniteElementAdjacencyMap_multiIndex	entFEAdjacencies
	adjacencies of elements to dofs
Problem_multiIndex	pRoblems
	problems multi-index
std::reference_wrapper< moab::Interface >	moab
	moab database
PetscLogEvent	MOFEM_EVENT_preProcess
	Event for preProcess finite element.
PetscLogEvent	MOFEM_EVENT_operator
	Event for evaluating operator of finite element.
PetscLogEvent	MOFEM_EVENT_postProcess
	Event for postProcess finite element.
PetscLogEvent	MOFEM_EVENT_createMat
MPI_Comm	mofemComm
	MoFEM communicator.
ParallelComm *	pComm
	MOAB communicator structure.
int	sIze
	MoFEM communicator size.
int	rAnk
	MOFEM communicator rank.
Static Protected Attributes inherited from MoFEM::CoreTmp< 0 >
static bool	isGloballyInitialised = false
	Core base globally initialized.
static int	mpiInitialised
	mpi was initialised by other agent
static PetscBool	isInitialized
	petsc was initialised by other agent

Detailed Description

Definition at line 1127 of file Core.hpp.

Constructor & Destructor Documentation

CoreTmp()

MoFEM::CoreTmp<-1 >::CoreTmp	(	moab::Interface &	moab,
		MPI_Comm	comm = PETSC_COMM_WORLD,
		const int	verbose = VERBOSE
	)

Construct core database

Parameters

moab	MoAB interface
comm	MPI communicator
verbose	Verbosity level

Definition at line 265 of file Core.cpp.

    : CoreTmp<0>(moab, comm, verbose, CoreValue<-1>()) {
 
  // Register sub-interfaces
  ierr = this->registerSubInterfaces();
  CHKERRABORT(comm, ierr);
  ierr = this->clearMap();
  CHKERRABORT(comm, ierr);
  ierr = this->getTags();
  CHKERRABORT(comm, ierr);
  ierr = this->getOptions(verbose);
  CHKERRABORT(comm, ierr);
 
  this->basicEntityDataPtr = boost::make_shared<BasicEntityData>(moab);
  setRefEntBasicDataPtr(*this, this->basicEntityDataPtr);
 
  ierr = this->initialiseDatabaseFromMesh(verbose);
  CHKERRABORT(comm, ierr);
}

Member Function Documentation

getValue()

const int MoFEM::CoreTmp<-1 >::getValue ( ) const

inlinevirtual

Get the core.

Returns

int The core value

Reimplemented from MoFEM::CoreTmp< 0 >.

Definition at line 1130 of file Core.hpp.

{ return value; }

make_shared_ref_entity()

boost::shared_ptr< RefEntityTmp< 0 > > MoFEM::CoreTmp<-1 >::make_shared_ref_entity ( const EntityHandle  ent )

virtual

Get RefEntity.

Parameters

ent	Entity handle to create reference entity from

Returns

boost::shared_ptr<RefEntityTmp<0>> Shared pointer to reference entity

Reimplemented from MoFEM::CoreTmp< 0 >.

Definition at line 988 of file Core.cpp.

                                                          {
  return this->makeSharedRefEntity(*this, ent);
}

set_moab_interface()

MoFEMErrorCode MoFEM::CoreTmp<-1 >::set_moab_interface ( moab::Interface &  new_moab, int  verb = VERBOSE  )

virtual

Set the moab interface object.

Parameters

new_moab	Reference to new MOAB interface to set
verb	Verbosity level (default: VERBOSE)

Returns

MoFEMErrorCode Error code indicating success or failure

Reimplemented from MoFEM::CoreTmp< 0 >.

Definition at line 772 of file Core.cpp.

                                                         {
  return this->setMoabInterface(new_moab, verb);
};

Member Data Documentation

value

constexpr const int MoFEM::CoreTmp<-1 >::value = -1

staticconstexpr

Definition at line 1129 of file Core.hpp.

---

The documentation for this struct was generated from the following files:

• src/interfaces/Core.hpp
• src/interfaces/impl/Core.cpp