MoFEM::CoreTmp<-1 > Struct Reference

#include "src/interfaces/Core.hpp"

Inheritance diagram for MoFEM::CoreTmp<-1 >:

Collaboration diagram for MoFEM::CoreTmp<-1 >:

Public Member Functions
const int	getValue () const
	Get the core.
virtual boost::shared_ptr< RefEntityTmp< 0 > >	make_shared_ref_entity (const EntityHandle ent)
	Get RefEntity.
	CoreTmp (moab::Interface &moab, MPI_Comm comm=PETSC_COMM_WORLD, const int verbose=VERBOSE)
virtual MoFEMErrorCode	set_moab_interface (moab::Interface &new_moab, int verb=VERBOSE)
	Set the moab interface object.
Public Member Functions inherited from MoFEM::CoreTmp< 0 >
RefEntityTmp< 0 >	getRefEntity (const EntityHandle ent)
	CoreTmp (moab::Interface &moab, MPI_Comm comm=PETSC_COMM_WORLD, const int verbose=VERBOSE)
virtual	~CoreTmp ()
int &	getBuildMoFEM () const
	Get flags/semaphores for different stages.
MoFEMErrorCode	addPrismToDatabase (const EntityHandle prism, int verb=DEFAULT_VERBOSITY)
	add prim element
MoFEMErrorCode	query_interface (boost::typeindex::type_index type_index, UnknownInterface **iface) const
	Getting interface of core database.
Tag	get_th_RefParentHandle () const
Tag	get_th_RefBitLevel () const
Tag	get_th_RefBitEdge () const
Public Member Functions inherited from MoFEM::DeprecatedCoreInterface
virtual DEPRECATED MoFEMErrorCode	seed_ref_level_2D (const EntityHandle meshset, const BitRefLevel &bit, int verb=-1)
	seed 2D entities (Triangles entities only) in the meshset and their adjacencies (only TRIs adjacencies) in a particular BitRefLevel
DEPRECATED MoFEMErrorCode	seed_ref_level_3D (const EntityHandle meshset, const BitRefLevel &bit, int verb=-1)
	seed 2D entities in the meshset and their adjacencies (only TETs adjacencies) in a particular BitRefLevel
DEPRECATED MoFEMErrorCode	seed_ref_level (const Range &ents, const BitRefLevel &bit, const bool only_tets=true, int verb=-1)
	seed entities in the range and their adjacencies in a particular BitRefLevel
DEPRECATED MoFEMErrorCode	partition_mesh (const Range &ents, const int dim, const int adj_dim, const int n_parts, int verb=-1)
	Set partition tag to each finite element in the problem.
DEPRECATED MoFEMErrorCode	synchronise_entities (Range &ent, int verb=DEFAULT_VERBOSITY)
DEPRECATED MoFEMErrorCode	synchronise_field_entities (const std::string &name, int verb=DEFAULT_VERBOSITY)
Public Member Functions inherited from MoFEM::CoreInterface
virtual	~CoreInterface ()=default
virtual MoFEMErrorCode	add_broken_field (const std::string name, const FieldSpace space, const FieldApproximationBase base, const FieldCoefficientsNumber nb_of_coefficients, const std::vector< std::pair< EntityType, std::function< MoFEMErrorCode(BaseFunction::DofsSideMap &)> > > list_dof_side_map, const TagType tag_type=MB_TAG_SPARSE, const enum MoFEMTypes bh=MF_EXCL, int verb=DEFAULT_VERBOSITY)=0
	Add field.
Public Member Functions inherited from MoFEM::UnknownInterface
template<class IFACE >
MoFEMErrorCode	registerInterface (bool error_if_registration_failed=true)
	Register interface.
template<class IFACE >
MoFEMErrorCode	getInterface (IFACE *&iface) const
	Get interface reference to pointer of interface.
template<class IFACE >
MoFEMErrorCode	getInterface (IFACE **const iface) const
	Get interface pointer to pointer of interface.
template<class IFACE , typename boost::enable_if< boost::is_pointer< IFACE >, int >::type = 0>
IFACE	getInterface () const
	Get interface pointer to pointer of interface.
template<class IFACE , typename boost::enable_if< boost::is_reference< IFACE >, int >::type = 0>
IFACE	getInterface () const
	Get reference to interface.
template<class IFACE >
IFACE *	getInterface () const
	Function returning pointer to interface.
virtual	~UnknownInterface ()=default

Static Public Attributes
static constexpr const int	value = -1
Static Public Attributes inherited from MoFEM::CoreTmp< 0 >
static constexpr int	value = 0

Additional Inherited Members
Public Types inherited from MoFEM::CoreTmp< 0 >
enum	SemaphoresBuildMofem {   BUILD_FIELD = 1 << 0 , BUILD_FE = 1 << 1 , BUILD_ADJ = 1 << 2 , BUILD_PROBLEM = 1 << 3 ,   PARTITION_PROBLEM = 1 << 4 , PARTITION_FE = 1 << 5 , PARTITION_GHOST_DOFS = 1 << 6 , PARTITION_MESH = 1 << 7 }
Static Public Member Functions inherited from MoFEM::CoreTmp< 0 >
static MoFEMErrorCode	Initialize (int *argc, char ***args, const char file[], const char help[])
	Initializes the MoFEM database PETSc, MOAB and MPI.
static const std::string &	getPetscOptionsFile ()
static MoFEMErrorCode	Finalize ()
	Checks for options to be called at the conclusion of the program.
static void	setRefEntBasicDataPtr (MoFEM::Interface &m_field, boost::shared_ptr< BasicEntityData > &ptr)
static boost::shared_ptr< RefEntityTmp< 0 > >	makeSharedRefEntity (MoFEM::Interface &m_field, const EntityHandle ent)
Static Public Member Functions inherited from MoFEM::UnknownInterface
static MoFEMErrorCode	getLibVersion (Version &version)
	Get library version.
static MoFEMErrorCode	getFileVersion (moab::Interface &moab, Version &version)
	Get database major version.
static MoFEMErrorCode	setFileVersion (moab::Interface &moab, Version version=Version(MoFEM_VERSION_MAJOR, MoFEM_VERSION_MINOR, MoFEM_VERSION_BUILD))
	Get database major version.
static MoFEMErrorCode	getInterfaceVersion (Version &version)
	Get database major version.
Protected Member Functions inherited from MoFEM::CoreTmp< 0 >
template<int V>
	CoreTmp (moab::Interface &moab, MPI_Comm comm, const int verbose, CoreValue< V >)
MoFEMErrorCode	coreGenericConstructor (moab::Interface &moab, MPI_Comm comm, const int verbose)
MoFEMErrorCode	addProblem (const BitProblemId id, const std::string &name, int verb=DEFAULT_VERBOSITY)
	add problem
MoFEMErrorCode	getTags (int verb=DEFAULT_VERBOSITY)
	Get tag handles.
MoFEMErrorCode	clearMap ()
	Cleaning database.
MoFEMErrorCode	registerSubInterfaces ()
	Register insterfaces.
BitProblemId	getProblemShift ()
	Return unique problem Id.
MoFEMErrorCode	initialiseDatabaseFromMesh (int verb=DEFAULT_VERBOSITY)
	Initialize database getting information on mesh.
MoFEMErrorCode	getOptions (int verb=DEFAULT_VERBOSITY)
	Get core options from command line.
template<class IFACE >
MoFEMErrorCode	regSubInterface ()
	Register sub-interfaces in core interface.
template<class IFACE >
MoFEMErrorCode	regEvents ()
	Register petsc events.
boost::shared_ptr< BasicEntityData > &	get_basic_entity_data_ptr ()
	Get pointer to basic entity data.
moab::Interface &	get_moab ()
const moab::Interface &	get_moab () const
MoFEMErrorCode	setMoabInterface (moab::Interface &new_moab, int verb=VERBOSE)
MPI_Comm &	get_comm () const
int	get_comm_size () const
int	get_comm_rank () const
MoFEMErrorCode	check_number_of_ents_in_ents_field (const std::string &name) const
	check data consistency in entitiesPtr
MoFEMErrorCode	check_number_of_ents_in_ents_field () const
	check data consistency in entitiesPtr
MoFEMErrorCode	check_number_of_ents_in_ents_finite_element (const std::string &name) const
	check data consistency in entsFiniteElements
MoFEMErrorCode	check_number_of_ents_in_ents_finite_element () const
	check data consistency in entsFiniteElements
MoFEMErrorCode	clear_database (int verb=DEFAULT_VERBOSITY)
	Clear database.
MoFEMErrorCode	rebuild_database (int verb=DEFAULT_VERBOSITY)
	Clear database and initialize it once again.
MeshsetsManager *	get_meshsets_manager_ptr ()
	get MeshsetsManager pointer
const MeshsetsManager *	get_meshsets_manager_ptr () const
	get MeshsetsManager pointer
MeshsetsManager &	get_meshsets_manager ()
	get MeshsetsManager reference
const MeshsetsManager &	get_meshsets_manager () const
	get MeshsetsManager reference
MoFEMErrorCode	remove_parents_by_ents (const Range &ents, int verb=DEFAULT_VERBOSITY)
	Remove parents from entities.
MoFEMErrorCode	remove_parents_by_bit_ref (const BitRefLevel bit, const BitRefLevel mask, int verb=DEFAULT_VERBOSITY)
	Remove parent from entities on bit level.
MoFEMErrorCode	remove_parents_by_parents (const Range &ents, int verb=DEFAULT_VERBOSITY)
	Remove parents from entities having parents in passed range.
MoFEMErrorCode	remove_ents (const Range ents, int verb=DEFAULT_VERBOSITY)
	Remove entities from MoFEM database.
MoFEMErrorCode	remove_ents_by_bit_ref (const BitRefLevel bit, const BitRefLevel mask, int verb=DEFAULT_VERBOSITY)
	Remove entities from MoFEM database.
MoFEMErrorCode	delete_ents_by_bit_ref (const BitRefLevel bit, const BitRefLevel mask, const bool remove_parent=false, int verb=DEFAULT_VERBOSITY, MoFEMTypes mf=MF_ZERO)
	Delete entities from MoFEM and MOAB database.
virtual MoFEMErrorCode	add_broken_field (const std::string name, const FieldSpace space, const FieldApproximationBase base, const FieldCoefficientsNumber nb_coefficients, std::vector< std::pair< EntityType, std::function< MoFEMErrorCode(BaseFunction::DofsSideMap &)> > > list_dof_side_map, const TagType tag_type=MB_TAG_SPARSE, const enum MoFEMTypes bh=MF_EXCL, int verb=DEFAULT_VERBOSITY)
	Add field.
virtual MoFEMErrorCode	add_field (const std::string name, const FieldSpace space, const FieldApproximationBase base, const FieldCoefficientsNumber nb_coefficients, const TagType tag_type=MB_TAG_SPARSE, const enum MoFEMTypes bh=MF_EXCL, int verb=DEFAULT_VERBOSITY)
	Add field.
MoFEMErrorCode	delete_field (const std::string name, int verb=DEFAULT_VERBOSITY)
	Delete field.
MoFEMErrorCode	addField (const std::string &name, const FieldSpace space, const FieldContinuity continuity, const FieldApproximationBase base, const FieldCoefficientsNumber nb_coefficients, const TagType tag_type, const enum MoFEMTypes bh, int verb)
	Template for add_field.
MoFEMErrorCode	addEntsToFieldByDim (const Range &ents, const int dim, const std::string &name, int verb=DEFAULT_VERBOSITY)
MoFEMErrorCode	add_ents_to_field_by_dim (const Range &ents, const int dim, const std::string &name, int verb=DEFAULT_VERBOSITY)
	Add entities to field meshset.
MoFEMErrorCode	add_ents_to_field_by_type (const Range &ents, const EntityType type, const std::string &name, int verb=DEFAULT_VERBOSITY)
	Add entities to field meshset.
MoFEMErrorCode	add_ents_to_field_by_dim (const EntityHandle meshset, const int dim, const std::string &name, const bool recursive=true, int verb=DEFAULT_VERBOSITY)
	Add entities to field meshset.
MoFEMErrorCode	add_ents_to_field_by_type (const EntityHandle meshset, const EntityType type, const std::string &name, const bool recursive=true, int verb=DEFAULT_VERBOSITY)
	Add entities to field meshset.
MoFEMErrorCode	create_vertices_and_add_to_field (const std::string name, const double coords[], int size, int verb=DEFAULT_VERBOSITY)
	Create vertices and add to the field object.
MoFEMErrorCode	setFieldOrder (const Range &ents, const BitFieldId id, const ApproximationOrder order, int ver)
MoFEMErrorCode	setFieldOrderImpl (boost::shared_ptr< Field > field_ptr, const Range &ents, const ApproximationOrder order, int verb)
MoFEMErrorCode	set_field_order (const Range &ents, const BitFieldId id, const ApproximationOrder order, int verb=DEFAULT_VERBOSITY)
MoFEMErrorCode	set_field_order (const EntityHandle meshset, const EntityType type, const BitFieldId id, const ApproximationOrder order, int verb=DEFAULT_VERBOSITY)
MoFEMErrorCode	set_field_order (const Range &ents, const std::string &name, const ApproximationOrder order, int verb=DEFAULT_VERBOSITY)
	Set order approximation of the entities in the field.
MoFEMErrorCode	set_field_order (const EntityHandle meshset, const EntityType type, const std::string &name, const ApproximationOrder order, int verb=DEFAULT_VERBOSITY)
	Set order approximation of the entities in the field.
MoFEMErrorCode	set_field_order_by_entity_type_and_bit_ref (const BitRefLevel &bit, const BitRefLevel &mask, const EntityType type, const BitFieldId id, const ApproximationOrder order, int verb=DEFAULT_VERBOSITY)
MoFEMErrorCode	set_field_order_by_entity_type_and_bit_ref (const BitRefLevel &bit, const BitRefLevel &mask, const EntityType type, const std::string &name, const ApproximationOrder order, int verb=DEFAULT_VERBOSITY)
	Set order approximation of the entities in the field.
MoFEMErrorCode	buildFieldForNoFieldImpl (boost::shared_ptr< Field > field_ptr, std::map< EntityType, int > &dof_counter, int verb)
MoFEMErrorCode	buildFieldForNoField (const BitFieldId id, std::map< EntityType, int > &dof_counter, int verb=DEFAULT_VERBOSITY)
MoFEMErrorCode	buildFieldForL2H1HcurlHdiv (const BitFieldId id, std::map< EntityType, int > &dof_counter, std::map< EntityType, int > &inactive_dof_counter, int verb=DEFAULT_VERBOSITY)
MoFEMErrorCode	buildField (const boost::shared_ptr< Field > &field, int verb=DEFAULT_VERBOSITY)
MoFEMErrorCode	build_fields (int verb=DEFAULT_VERBOSITY)
MoFEMErrorCode	build_field (const std::string field_name, int verb=DEFAULT_VERBOSITY)
	build field by name
MoFEMErrorCode	clear_inactive_dofs (int verb=DEFAULT_VERBOSITY)
MoFEMErrorCode	clear_dofs_fields_by_bit_ref (const BitRefLevel bit, const BitRefLevel mask, int verb=DEFAULT_VERBOSITY)
MoFEMErrorCode	clear_dofs_fields (const Range ents, int verb=DEFAULT_VERBOSITY)
MoFEMErrorCode	clear_dofs_fields (const std::string name, const Range ents, int verb=DEFAULT_VERBOSITY)
MoFEMErrorCode	clear_ents_fields_by_bit_ref (const BitRefLevel bit, const BitRefLevel mask, int verb=DEFAULT_VERBOSITY)
MoFEMErrorCode	clear_ents_fields (const Range ents, int verb=DEFAULT_VERBOSITY)
MoFEMErrorCode	clear_ents_fields (const std::string name, const Range ents, int verb=DEFAULT_VERBOSITY)
MoFEMErrorCode	remove_ents_from_field_by_bit_ref (const BitRefLevel bit, const BitRefLevel mask, int verb=DEFAULT_VERBOSITY)
	remove entities from field
MoFEMErrorCode	remove_ents_from_field (const std::string name, const EntityHandle meshset, const EntityType type, int verb=DEFAULT_VERBOSITY)
	remove entities from field
MoFEMErrorCode	remove_ents_from_field (const std::string name, const Range ents, int verb=DEFAULT_VERBOSITY)
	remove entities from field
MoFEMErrorCode	remove_ents_from_field (const Range ents, int verb=DEFAULT_VERBOSITY)
	remove entities from all fields
MoFEMErrorCode	list_dofs_by_field_name (const std::string &name) const
MoFEMErrorCode	list_fields () const
	list entities in the field
BitFieldId	get_field_id (const std::string &name) const
	Get field Id.
FieldBitNumber	get_field_bit_number (const std::string name) const
	get field bit number
std::string	get_field_name (const BitFieldId id) const
	get field name from id
EntityHandle	get_field_meshset (const BitFieldId id) const
EntityHandle	get_field_meshset (const std::string name) const
	get field meshset
MoFEMErrorCode	get_field_entities_by_dimension (const std::string name, int dim, Range &ents) const
	get entities in the field by dimension
MoFEMErrorCode	get_field_entities_by_type (const std::string name, EntityType type, Range &ents) const
	get entities in the field by type
MoFEMErrorCode	get_field_entities_by_handle (const std::string name, Range &ents) const
	get entities in the field by handle
bool	check_field (const std::string &name) const
	check if field is in database
const Field *	get_field_structure (const std::string &name, enum MoFEMTypes bh=MF_EXIST) const
	get field structure
const FiniteElement *	get_finite_element_structure (const std::string &name, enum MoFEMTypes bh=MF_EXCL) const
	get finite element structure
bool	check_finite_element (const std::string &name) const
	Check if finite element is in database.
MoFEMErrorCode	add_finite_element (const std::string &fe_name, enum MoFEMTypes bh=MF_EXCL, int verb=DEFAULT_VERBOSITY)
	add finite element
MoFEMErrorCode	modify_finite_element_adjacency_table (const std::string &fe_name, const EntityType type, ElementAdjacencyFunct function)
	modify finite element table, only for advanced user
MoFEMErrorCode	modify_finite_element_add_field_data (const std::string &fe_name, const std::string name_filed)
	set finite element field data
MoFEMErrorCode	modify_finite_element_add_field_row (const std::string &fe_name, const std::string name_row)
	set field row which finite element use
MoFEMErrorCode	modify_finite_element_add_field_col (const std::string &fe_name, const std::string name_col)
	set field col which finite element use
MoFEMErrorCode	modify_finite_element_off_field_data (const std::string &fe_name, const std::string name_filed)
	unset finite element field data
MoFEMErrorCode	modify_finite_element_off_field_row (const std::string &fe_name, const std::string name_row)
	unset field row which finite element use
MoFEMErrorCode	modify_finite_element_off_field_col (const std::string &fe_name, const std::string name_col)
	unset field col which finite element use
MoFEMErrorCode	add_ents_to_finite_element_by_type (const EntityHandle meshset, const EntityType type, const std::string name, const bool recursive=true)
	add entities to finite element
MoFEMErrorCode	add_ents_to_finite_element_by_dim (const EntityHandle meshset, const int dim, const std::string name, const bool recursive=true)
	add entities to finite element
MoFEMErrorCode	add_ents_to_finite_element_by_type (const Range ents, const EntityType type, const std::string name)
	add entities to finite elements
MoFEMErrorCode	add_ents_to_finite_element_by_dim (const Range ents, const int dim, const std::string name)
	add entities to finite elements
MoFEMErrorCode	add_ents_to_finite_element_by_bit_ref (const BitRefLevel bit, const BitRefLevel mask, const std::string name, EntityType type, int verb=DEFAULT_VERBOSITY)
	add TET entities from given refinement level to finite element database given by name
MoFEMErrorCode	add_ents_to_finite_element_by_MESHSET (const EntityHandle meshset, const std::string &name, const bool recursive=false)
	add MESHSET element to finite element database given by name
DEPRECATED MoFEMErrorCode	add_ents_to_finite_element_EntType_by_bit_ref (const BitRefLevel &bit, const std::string &name, EntityType type, int verb=DEFAULT_VERBOSITY)
DEPRECATED MoFEMErrorCode	add_ents_to_finite_element_EntType_by_bit_ref (const BitRefLevel &bit, const BitRefLevel &mask, const std::string &name, EntityType type, int verb=DEFAULT_VERBOSITY)
MoFEMErrorCode	remove_ents_from_finite_element_by_bit_ref (const BitRefLevel bit, const BitRefLevel mask, int verb=DEFAULT_VERBOSITY)
	remove elements from given refinement level to finite element database
MoFEMErrorCode	remove_ents_from_finite_element (const std::string name, const EntityHandle meshset, const EntityType type, int verb=DEFAULT_VERBOSITY)
	remove entities from given refinement level to finite element database
MoFEMErrorCode	remove_ents_from_finite_element (const std::string name, const Range ents, int verb=DEFAULT_VERBOSITY)
	remove entities from finite element database
MoFEMErrorCode	remove_ents_from_finite_element (const Range ents, int verb=DEFAULT_VERBOSITY)
	remove entities from finite elements in database
MoFEMErrorCode	delete_finite_element (const std::string name, int verb=DEFAULT_VERBOSITY)
	Delete finite element from MoFEM database.
BitFEId	getBitFEId (const std::string &fe_name) const
	Get field Id.
std::string	getBitFEIdName (const BitFEId id) const
	Get field name.
EntityHandle	get_finite_element_meshset (const BitFEId id) const
EntityHandle	get_finite_element_meshset (const std::string name) const
MoFEMErrorCode	get_finite_element_entities_by_dimension (const std::string name, int dim, Range &ents) const
	get entities in the finite element by dimension
MoFEMErrorCode	get_finite_element_entities_by_type (const std::string name, EntityType type, Range &ents) const
	get entities in the finite element by type
MoFEMErrorCode	get_finite_element_entities_by_handle (const std::string name, Range &ents) const
	get entities in the finite element by handle
MoFEMErrorCode	list_finite_elements () const
	list finite elements in database
MoFEMErrorCode	add_problem (const std::string &name, enum MoFEMTypes bh=MF_EXCL, int verb=DEFAULT_VERBOSITY)
	Add problem.
bool	check_problem (const std::string name)
	check if problem exist
MoFEMErrorCode	delete_problem (const std::string name)
	Delete problem.
MoFEMErrorCode	modify_problem_add_finite_element (const std::string name_problem, const std::string &fe_name)
	add finite element to problem, this add entities assigned to finite element to a particular problem
MoFEMErrorCode	modify_problem_unset_finite_element (const std::string name_problem, const std::string &fe_name)
	unset finite element from problem, this remove entities assigned to finite element to a particular problem
MoFEMErrorCode	modify_problem_ref_level_add_bit (const std::string &name_problem, const BitRefLevel &bit)
	add ref level to problem
MoFEMErrorCode	modify_problem_ref_level_set_bit (const std::string &name_problem, const BitRefLevel &bit)
	set ref level for problem
MoFEMErrorCode	modify_problem_mask_ref_level_add_bit (const std::string &name_problem, const BitRefLevel &bit)
	set dof mask ref level for problem
MoFEMErrorCode	modify_problem_mask_ref_level_set_bit (const std::string &name_problem, const BitRefLevel &bit)
	set dof mask ref level for problem
BitProblemId	getBitProblemId (const std::string &name) const
MoFEMErrorCode	list_problem () const
	list problems
MoFEMErrorCode	clear_problem (const std::string name, int verb=DEFAULT_VERBOSITY)
	clear problem
MoFEMErrorCode	clear_problems (int verb=DEFAULT_VERBOSITY)
	clear problems
MoFEMErrorCode	build_finite_elements (int verb=DEFAULT_VERBOSITY)
	Build finite elements.
MoFEMErrorCode	build_finite_elements (const BitRefLevel &bit, int verb=DEFAULT_VERBOSITY)
MoFEMErrorCode	build_finite_elements (const string fe_name, const Range *const ents_ptr=nullptr, int verb=DEFAULT_VERBOSITY)
	Build finite elements.
MoFEMErrorCode	buildFiniteElements (const boost::shared_ptr< FiniteElement > &fe, const Range *ents_ptr=NULL, int verb=DEFAULT_VERBOSITY)
MoFEMErrorCode	clear_finite_elements_by_bit_ref (const BitRefLevel bit, const BitRefLevel mask, int verb=DEFAULT_VERBOSITY)
MoFEMErrorCode	clear_finite_elements (const Range &ents, int verb=DEFAULT_VERBOSITY)
MoFEMErrorCode	clear_finite_elements (const std::string &fe_name, const Range &ents, int verb=DEFAULT_VERBOSITY)
MoFEMErrorCode	get_problem_finite_elements_entities (const std::string name, const std::string &fe_name, const EntityHandle meshset)
	add finite elements to the meshset
DEPRECATED MoFEMErrorCode	build_problem_on_distributed_mesh (int verb=DEFAULT_VERBOSITY)
DEPRECATED MoFEMErrorCode	build_problems (int verb=DEFAULT_VERBOSITY)
MoFEMErrorCode	build_adjacencies (const Range &ents, int verb=DEFAULT_VERBOSITY)
	build adjacencies
MoFEMErrorCode	build_adjacencies (const BitRefLevel &bit, int verb=DEFAULT_VERBOSITY)
	build adjacencies
MoFEMErrorCode	build_adjacencies (const BitRefLevel &bit, const BitRefLevel &mask, int verb=DEFAULT_VERBOSITY)
	build adjacencies
MoFEMErrorCode	clear_adjacencies_entities (const BitRefLevel bit, const BitRefLevel mask, int verb=DEFAULT_VERBOSITY)
	clear adjacency map for entities on given bit level
MoFEMErrorCode	clear_adjacencies_entities (const Range ents, int verb=DEFAULT_VERBOSITY)
	clear adjacencies for field entities by entities
MoFEMErrorCode	clear_adjacencies_entities (const std::string name, const Range ents, int verb=DEFAULT_VERBOSITY)
	clear adjacencies for field entities by entities and field namd
MoFEMErrorCode	clear_adjacencies_finite_elements (const BitRefLevel bit, const BitRefLevel mask, int verb=DEFAULT_VERBOSITY)
	clear adjacency map for finite elements on given bit level
MoFEMErrorCode	clear_adjacencies_finite_elements (const Range ents, int verb=DEFAULT_VERBOSITY)
MoFEMErrorCode	clear_adjacencies_finite_elements (const std::string name, const Range ents, int verb=DEFAULT_VERBOSITY)
MoFEMErrorCode	problem_basic_method_preProcess (const Problem *problem_ptr, BasicMethod &method, int verb=DEFAULT_VERBOSITY)
	Set data for BasicMethod.
MoFEMErrorCode	problem_basic_method_preProcess (const std::string &problem_name, BasicMethod &method, int verb=DEFAULT_VERBOSITY)
	Set data for BasicMethod.
MoFEMErrorCode	problem_basic_method_postProcess (const Problem *problem_ptr, BasicMethod &method, int verb=DEFAULT_VERBOSITY)
	Set data for BasicMethod.
MoFEMErrorCode	problem_basic_method_postProcess (const std::string &problem_name, BasicMethod &method, int verb=DEFAULT_VERBOSITY)
	Set data for BasicMethod.
MoFEMErrorCode	cache_problem_entities (const std::string prb_name, CacheTupleWeakPtr cache_ptr)
	Cache variables.
MoFEMErrorCode	loop_finite_elements (const Problem *problem_ptr, const std::string &fe_name, FEMethod &method, int lower_rank, int upper_rank, boost::shared_ptr< NumeredEntFiniteElement_multiIndex > fe_ptr=nullptr, MoFEMTypes bh=MF_EXIST, CacheTupleWeakPtr cache_ptr=CacheTupleSharedPtr(), int verb=DEFAULT_VERBOSITY)
	Make a loop over finite elements on partitions from upper to lower rank.
MoFEMErrorCode	loop_finite_elements (const std::string problem_name, const std::string &fe_name, FEMethod &method, int lower_rank, int upper_rank, boost::shared_ptr< NumeredEntFiniteElement_multiIndex > fe_ptr=nullptr, MoFEMTypes bh=MF_EXIST, CacheTupleWeakPtr cache_ptr=CacheTupleSharedPtr(), int verb=DEFAULT_VERBOSITY)
	Make a loop over finite elements on partitions from upper to lower rank.
MoFEMErrorCode	loop_finite_elements (const std::string problem_name, const std::string &fe_name, FEMethod &method, boost::shared_ptr< NumeredEntFiniteElement_multiIndex > fe_ptr=nullptr, MoFEMTypes bh=MF_EXIST, CacheTupleWeakPtr cache_ptr=CacheTupleSharedPtr(), int verb=DEFAULT_VERBOSITY)
	Make a loop over finite elements.
MoFEMErrorCode	loop_dofs (const Problem *problem_ptr, const std::string &field_name, RowColData rc, DofMethod &method, int lower_rank, int upper_rank, int verb=DEFAULT_VERBOSITY)
	Make a loop over dofs.
MoFEMErrorCode	loop_dofs (const std::string &problem_name, const std::string &field_name, RowColData rc, DofMethod &method, int lower_rank, int upper_rank, int verb=DEFAULT_VERBOSITY)
	Make a loop over dofs.
MoFEMErrorCode	loop_dofs (const std::string &problem_name, const std::string &field_name, RowColData rc, DofMethod &method, int verb=DEFAULT_VERBOSITY)
	Make a loop over dofs.
MoFEMErrorCode	loop_dofs (const std::string &field_name, DofMethod &method, int verb=DEFAULT_VERBOSITY)
	Make a loop over dofs.
MoFEMErrorCode	loop_entities (const Problem *problem_ptr, const std::string field_name, RowColData rc, EntityMethod &method, int lower_rank, int upper_rank, int verb=DEFAULT_VERBOSITY)
	Loop over field entities in the problem.
MoFEMErrorCode	loop_entities (const std::string problem_name, const std::string field_name, RowColData rc, EntityMethod &method, int lower_rank, int upper_rank, int verb=DEFAULT_VERBOSITY)
	Loop over field entities in the problem.
MoFEMErrorCode	loop_entities (const std::string problem_name, const std::string field_name, RowColData rc, EntityMethod &method, int verb=DEFAULT_VERBOSITY)
	Loop over field entities in the problem.
MoFEMErrorCode	loop_entities (const std::string field_name, EntityMethod &method, Range const *const ents=nullptr, int verb=DEFAULT_VERBOSITY)
	Loop over field entities.
MoFEMErrorCode	get_fields (const Field_multiIndex **fields_ptr) const
	Get fields multi-index from database.
MoFEMErrorCode	get_ref_ents (const RefEntity_multiIndex **refined_entities_ptr) const
	Get ref entities multi-index from database.
MoFEMErrorCode	get_ref_finite_elements (const RefElement_multiIndex **refined_finite_elements_ptr) const
	Get ref finite elements multi-index form database.
MoFEMErrorCode	get_finite_elements (const FiniteElement_multiIndex **fe_ptr) const
	Get finite elements multi-index.
MoFEMErrorCode	get_ents_finite_elements (const EntFiniteElement_multiIndex **fe_ent_ptr) const
	Get entities finite elements multi-index.
MoFEMErrorCode	get_field_ents (const FieldEntity_multiIndex **field_ents) const
	Get field multi index.
MoFEMErrorCode	get_dofs (const DofEntity_multiIndex **dofs_ptr) const
	Get dofs multi index.
MoFEMErrorCode	get_problem (const std::string &problem_name, const Problem **problem_ptr) const
	Get problem database (data structure)
MoFEMErrorCode	get_problems (const Problem_multiIndex **problems_ptr) const
	Get pointer to problems multi-index.
MoFEMErrorCode	get_ents_elements_adjacency (const FieldEntityEntFiniteElementAdjacencyMap_multiIndex **dofs_elements_adjacency) const
	Get the dofs elements adjacency object.
const Field_multiIndex *	get_fields () const
	Get the fields object.
const RefEntity_multiIndex *	get_ref_ents () const
	Get the ref ents object.
const RefElement_multiIndex *	get_ref_finite_elements () const
	Get the ref finite elements object.
const FiniteElement_multiIndex *	get_finite_elements () const
	Get the finite elements object.
const EntFiniteElement_multiIndex *	get_ents_finite_elements () const
	Get the ents finite elements object.
const FieldEntity_multiIndex *	get_field_ents () const
	Get the field ents object.
const DofEntity_multiIndex *	get_dofs () const
	Get the dofs object.
const Problem *	get_problem (const std::string problem_name) const
	Get the problem object.
const Problem_multiIndex *	get_problems () const
	Get the problems object.
const FieldEntityEntFiniteElementAdjacencyMap_multiIndex *	get_ents_elements_adjacency () const
	Get the dofs elements adjacency object.
FieldEntityByUId::iterator	get_ent_field_by_name_begin (const std::string &field_name) const
	get begin iterator of field ents of given name (instead you can use IT_GET_ENT_FIELD_BY_NAME_FOR_LOOP(MFIELD,NAME,IT)
FieldEntityByUId::iterator	get_ent_field_by_name_end (const std::string &field_name) const
	get end iterator of field ents of given name (instead you can use IT_GET_ENT_FIELD_BY_NAME_FOR_LOOP(MFIELD,NAME,IT)
DofEntityByUId::iterator	get_dofs_by_name_begin (const std::string &field_name) const
	get begin iterator of field dofs of given name (instead you can use IT_GET_DOFS_FIELD_BY_NAME_FOR_LOOP(MFIELD,NAME,IT)
DofEntityByUId::iterator	get_dofs_by_name_end (const std::string &field_name) const
	get begin iterator of field dofs of given name (instead you can use IT_GET_DOFS_FIELD_BY_NAME_FOR_LOOP(MFIELD,NAME,IT)
DofEntityByUId::iterator	get_dofs_by_name_and_ent_begin (const std::string &field_name, const EntityHandle ent) const
	get begin iterator of field dofs of given name and ent(instead you can use IT_GET_DOFS_FIELD_BY_NAME_FOR_LOOP(MFIELD,NAME,ENT,IT)
DofEntityByUId::iterator	get_dofs_by_name_and_ent_end (const std::string &field_name, const EntityHandle ent) const
	get end iterator of field dofs of given name and ent (instead you can use IT_GET_DOFS_FIELD_BY_NAME_FOR_LOOP(MFIELD,NAME,ENT,IT)
DofEntityByUId::iterator	get_dofs_by_name_and_type_begin (const std::string &field_name, const EntityType type) const
	get begin iterator of field dofs of given name and ent type (instead you can use IT_GET_DOFS_FIELD_BY_NAME_FOR_LOOP(MFIELD,NAME,TYPE,IT)
DofEntityByUId::iterator	get_dofs_by_name_and_type_end (const std::string &field_name, const EntityType ent) const
	get end iterator of field dofs of given name and ent type(instead you can use IT_GET_DOFS_FIELD_BY_NAME_FOR_LOOP(MFIELD,NAME,TYPE,IT)
EntFiniteElement_multiIndex::index< Unique_mi_tag >::type::iterator	get_fe_by_name_begin (const std::string &fe_name) const
	get begin iterator of finite elements of given name (instead you can use IT_GET_FES_BY_NAME_FOR_LOOP(MFIELD,NAME,IT)
EntFiniteElement_multiIndex::index< Unique_mi_tag >::type::iterator	get_fe_by_name_end (const std::string &fe_name) const
	get end iterator of finite elements of given name (instead you can use IT_GET_FES_BY_NAME_FOR_LOOP(MFIELD,NAME,IT)
Protected Attributes inherited from MoFEM::CoreTmp< 0 >
boost::shared_ptr< WrapMPIComm >	wrapMPIMOABComm
	manage creation and destruction of MOAB communicator
int	verbose
	Verbosity level.
boost::ptr_map< boost::typeindex::type_index, UnknownInterface >	iFaces
	Hash map of pointers to interfaces.
int *	buildMoFEM
	keeps flags/semaphores for different stages
std::string	optionsPrefix
	Prefix for options on command line.
PetscBool	initaliseAndBuildField
PetscBool	initaliseAndBuildFiniteElements
Tag	th_Part
	Tag for partition number.
Tag	th_RefParentHandle
Tag	th_RefBitLevel
Tag	th_RefBitLevel_Mask
Tag	th_RefBitEdge
Tag	th_RefFEMeshset
Tag	th_FieldId
Tag	th_FieldName
Tag	th_FieldName_DataNamePrefix
Tag	th_FieldSpace
Tag	th_FieldContinuity
Tag	th_FieldBase
Tag	th_FEId
Tag	th_FEName
Tag	th_FEIdCol
Tag	th_FEIdRow
Tag	th_FEIdData
Tag	th_ProblemId
Tag	th_ProblemName
Tag	th_ProblemFEId
Tag	th_ProblemNbDofsRow
Tag	th_ProblemNbDofsCol
Tag	th_ProblemLocalNbDofRow
Tag	th_ProblemGhostNbDofRow
Tag	th_ProblemLocalNbDofCol
Tag	th_ProblemGhostNbDofCol
Tag	th_ProblemShift
Tag	th_ElemType
	Needed for VTK files.
Tag	th_MoFEMBuild
boost::shared_ptr< BasicEntityData >	basicEntityDataPtr
RefEntity_multiIndex	refinedEntities
	refined entities
RefElement_multiIndex	refinedFiniteElements
	refined elements
Field_multiIndex	fIelds
	fields
FieldEntity_multiIndex	entsFields
	entities on fields
DofEntity_multiIndex	dofsField
	dofs on fields
FiniteElement_multiIndex	finiteElements
	finite elements
EntFiniteElement_multiIndex	entsFiniteElements
	finite element entities
FieldEntityEntFiniteElementAdjacencyMap_multiIndex	entFEAdjacencies
	adjacencies of elements to dofs
Problem_multiIndex	pRoblems
	problems multi-index
std::reference_wrapper< moab::Interface >	moab
	moab database
PetscLogEvent	MOFEM_EVENT_preProcess
	Event for preProcess finite element.
PetscLogEvent	MOFEM_EVENT_operator
	Event for evaluating operator of finite element.
PetscLogEvent	MOFEM_EVENT_postProcess
	Event for postProcess finite element.
PetscLogEvent	MOFEM_EVENT_createMat
MPI_Comm	mofemComm
	MoFEM communicator.
ParallelComm *	pComm
	MOAB communicator structure.
int	sIze
	MoFEM communicator size.
int	rAnk
	MOFEM communicator rank.
Static Protected Attributes inherited from MoFEM::CoreTmp< 0 >
static bool	isGloballyInitialised = false
	Core base globally initialized.
static int	mpiInitialised = 0
	mpi was initialised by other agent
static PetscBool	isInitialized = PETSC_FALSE
	petsc was initialised by other agent
static std::string	petscOptionsFile = ""

Detailed Description

Definition at line 1133 of file Core.hpp.

Constructor & Destructor Documentation

CoreTmp()

MoFEM::CoreTmp<-1 >::CoreTmp	(	moab::Interface &	moab,
		MPI_Comm	comm = PETSC_COMM_WORLD,
		const int	verbose = VERBOSE
	)

Construct core database

Parameters

moab	MoAB interface
comm	MPI communicator
verbose	Verbosity level

Definition at line 270 of file Core.cpp.

    : CoreTmp<0>(moab, comm, verbose, CoreValue<-1>()) {
 
  // Register sub-interfaces
  ierr = this->registerSubInterfaces();
  CHKERRABORT(comm, ierr);
  ierr = this->clearMap();
  CHKERRABORT(comm, ierr);
  ierr = this->getTags();
  CHKERRABORT(comm, ierr);
  ierr = this->getOptions(verbose);
  CHKERRABORT(comm, ierr);
 
  this->basicEntityDataPtr = boost::make_shared<BasicEntityData>(moab);
  setRefEntBasicDataPtr(*this, this->basicEntityDataPtr);
 
  ierr = this->initialiseDatabaseFromMesh(verbose);
  CHKERRABORT(comm, ierr);
}

Member Function Documentation

getValue()

const int MoFEM::CoreTmp<-1 >::getValue ( ) const

inlinevirtual

Get the core.

Returns

int The core value

Reimplemented from MoFEM::CoreTmp< 0 >.

Definition at line 1136 of file Core.hpp.

{ return value; }

make_shared_ref_entity()

boost::shared_ptr< RefEntityTmp< 0 > > MoFEM::CoreTmp<-1 >::make_shared_ref_entity ( const EntityHandle  ent )

virtual

Get RefEntity.

Parameters

ent	Entity handle to create reference entity from

Returns

boost::shared_ptr<RefEntityTmp<0>> Shared pointer to reference entity

Reimplemented from MoFEM::CoreTmp< 0 >.

Definition at line 997 of file Core.cpp.

                                                          {
  return this->makeSharedRefEntity(*this, ent);
}

set_moab_interface()

MoFEMErrorCode MoFEM::CoreTmp<-1 >::set_moab_interface ( moab::Interface &  new_moab, int  verb = VERBOSE  )

virtual

Set the moab interface object.

Parameters

new_moab	Reference to new MOAB interface to set
verb	Verbosity level (default: VERBOSE)

Returns

MoFEMErrorCode Error code indicating success or failure

Reimplemented from MoFEM::CoreTmp< 0 >.

Definition at line 781 of file Core.cpp.

                                                         {
  return this->setMoabInterface(new_moab, verb);
};

Member Data Documentation

value

constexpr const int MoFEM::CoreTmp<-1 >::value = -1

staticconstexpr

Definition at line 1135 of file Core.hpp.

---

The documentation for this struct was generated from the following files:

• src/interfaces/Core.hpp
• src/interfaces/impl/Core.cpp