Deprecated interface functions. More...

#include "src/interfaces/DeprecatedCoreInterface.hpp"

Inheritance diagram for MoFEM::DeprecatedCoreInterface:

Collaboration diagram for MoFEM::DeprecatedCoreInterface:

Seed entities
virtual DEPRECATED MoFEMErrorCode	seed_ref_level_2D (const EntityHandle meshset, const BitRefLevel &bit, int verb=-1)
	seed 2D entities (Triangles entities only) in the meshset and their adjacencies (only TRIs adjacencies) in a particular BitRefLevel

DEPRECATED MoFEMErrorCode	seed_ref_level_3D (const EntityHandle meshset, const BitRefLevel &bit, int verb=-1)
	seed 2D entities in the meshset and their adjacencies (only TETs adjacencies) in a particular BitRefLevel

DEPRECATED MoFEMErrorCode	seed_ref_level (const Range &ents, const BitRefLevel &bit, const bool only_tets=true, int verb=-1)
	seed entities in the range and their adjacencies in a particular BitRefLevel

DEPRECATED MoFEMErrorCode	partition_mesh (const Range &ents, const int dim, const int adj_dim, const int n_parts, int verb=-1)
	Set partition tag to each finite element in the problem.

Synchronize
DEPRECATED MoFEMErrorCode	synchronise_entities (Range &ent, int verb=DEFAULT_VERBOSITY)

DEPRECATED MoFEMErrorCode	synchronise_field_entities (const std::string &name, int verb=DEFAULT_VERBOSITY)

Additional Inherited Members
Public Member Functions inherited from MoFEM::CoreInterface
virtual	~CoreInterface ()=default

virtual const int	getValue () const =0
	Get the core.

virtual boost::shared_ptr< RefEntityTmp< 0 > >	make_shared_ref_entity (const EntityHandle ent)=0
	Get RefEntity.

virtual moab::Interface &	get_moab ()=0

virtual const moab::Interface &	get_moab () const =0

virtual MoFEMErrorCode	set_moab_interface (moab::Interface &new_moab, int verb=VERBOSE)=0
	Set the moab interface object.

virtual MeshsetsManager *	get_meshsets_manager_ptr ()=0
	get MeshsetsManager pointer

virtual const MeshsetsManager *	get_meshsets_manager_ptr () const =0
	get MeshsetsManager pointer

virtual MeshsetsManager &	get_meshsets_manager ()=0
	get MeshsetsManager reference

virtual const MeshsetsManager &	get_meshsets_manager () const =0
	get MeshsetsManager reference

virtual boost::shared_ptr< BasicEntityData > &	get_basic_entity_data_ptr ()=0
	Get pointer to basic entity data.

virtual MPI_Comm &	get_comm () const =0

virtual int	get_comm_size () const =0

virtual int	get_comm_rank () const =0

virtual MoFEMErrorCode	check_number_of_ents_in_ents_field (const std::string &name) const =0
	check data consistency in entitiesPtr

virtual MoFEMErrorCode	check_number_of_ents_in_ents_field () const =0
	check data consistency in entitiesPtr

virtual MoFEMErrorCode	check_number_of_ents_in_ents_finite_element (const std::string &name) const =0
	check data consistency in entsFiniteElements

virtual MoFEMErrorCode	check_number_of_ents_in_ents_finite_element () const =0
	check data consistency in entsFiniteElements

virtual MoFEMErrorCode	clear_database (int verb=DEFAULT_VERBOSITY)=0
	Clear database.

virtual MoFEMErrorCode	rebuild_database (int verb=DEFAULT_VERBOSITY)=0
	Clear database and initialize it once again.

virtual MoFEMErrorCode	remove_parents_by_ents (const Range &ents, int verb=DEFAULT_VERBOSITY)=0
	Remove parents from entities.

virtual MoFEMErrorCode	remove_parents_by_bit_ref (const BitRefLevel bit, const BitRefLevel mask, int verb=DEFAULT_VERBOSITY)=0
	Remove parent from entities on bit level.

virtual MoFEMErrorCode	remove_parents_by_parents (const Range &ents, int verb=DEFAULT_VERBOSITY)=0
	Remove parents from entities having parents in passed range.

virtual MoFEMErrorCode	delete_ents_by_bit_ref (const BitRefLevel bit, const BitRefLevel mask, const bool remove_parent=false, int verb=DEFAULT_VERBOSITY, MoFEMTypes mf=MF_ZERO)=0
	Delete entities from MoFEM and MOAB database.

virtual MoFEMErrorCode	remove_ents (const Range ents, int verb=DEFAULT_VERBOSITY)=0
	Remove entities from MoFEM database.

virtual MoFEMErrorCode	remove_ents_by_bit_ref (const BitRefLevel bit, const BitRefLevel mask, int verb=DEFAULT_VERBOSITY)=0
	Remove entities from MoFEM database.

virtual MoFEMErrorCode	delete_finite_element (const std::string name, int verb=DEFAULT_VERBOSITY)=0
	Delete finite element from MoFEM database.

virtual MoFEMErrorCode	add_broken_field (const std::string name, const FieldSpace space, const FieldApproximationBase base, const FieldCoefficientsNumber nb_of_coefficients, const std::vector< std::pair< EntityType, std::function< MoFEMErrorCode(BaseFunction::DofsSideMap &)> > > list_dof_side_map, const TagType tag_type=MB_TAG_SPARSE, const enum MoFEMTypes bh=MF_EXCL, int verb=DEFAULT_VERBOSITY)=0
	Add field.

virtual MoFEMErrorCode	add_field (const std::string name, const FieldSpace space, const FieldApproximationBase base, const FieldCoefficientsNumber nb_of_coefficients, const TagType tag_type=MB_TAG_SPARSE, const enum MoFEMTypes bh=MF_EXCL, int verb=DEFAULT_VERBOSITY)=0
	Add field.

virtual MoFEMErrorCode	delete_field (const std::string name, int verb=DEFAULT_VERBOSITY)=0
	Delete field.

virtual MoFEMErrorCode	add_ents_to_field_by_dim (const Range &ents, const int dim, const std::string &name, int verb=DEFAULT_VERBOSITY)=0
	Add entities to field meshset.

virtual MoFEMErrorCode	add_ents_to_field_by_type (const Range &ents, const EntityType type, const std::string &name, int verb=DEFAULT_VERBOSITY)=0
	Add entities to field meshset.

virtual MoFEMErrorCode	add_ents_to_field_by_dim (const EntityHandle meshset, const int dim, const std::string &name, const bool recursive=true, int verb=DEFAULT_VERBOSITY)=0
	Add entities to field meshset.

virtual MoFEMErrorCode	add_ents_to_field_by_type (const EntityHandle meshset, const EntityType type, const std::string &name, const bool recursive=true, int verb=DEFAULT_VERBOSITY)=0
	Add entities to field meshset.

virtual MoFEMErrorCode	create_vertices_and_add_to_field (const std::string name, const double coords[], int size, int verb=DEFAULT_VERBOSITY)=0
	Create vertices and add to the field object.

virtual MoFEMErrorCode	remove_ents_from_field_by_bit_ref (const BitRefLevel bit, const BitRefLevel mask, int verb=DEFAULT_VERBOSITY)=0
	remove entities from field

virtual MoFEMErrorCode	remove_ents_from_field (const std::string name, const EntityHandle meshset, const EntityType type, int verb=DEFAULT_VERBOSITY)=0
	remove entities from field

virtual MoFEMErrorCode	remove_ents_from_field (const std::string name, const Range ents, int verb=DEFAULT_VERBOSITY)=0
	remove entities from field

virtual MoFEMErrorCode	remove_ents_from_field (const Range ents, int verb=DEFAULT_VERBOSITY)=0
	remove entities from all fields

virtual MoFEMErrorCode	set_field_order (const EntityHandle meshset, const EntityType type, const std::string &name, const ApproximationOrder order, int verb=DEFAULT_VERBOSITY)=0
	Set order approximation of the entities in the field.

virtual MoFEMErrorCode	set_field_order (const Range &ents, const std::string &name, const ApproximationOrder order, int verb=DEFAULT_VERBOSITY)=0
	Set order approximation of the entities in the field.

virtual MoFEMErrorCode	set_field_order_by_entity_type_and_bit_ref (const BitRefLevel &bit, const BitRefLevel &mask, const EntityType type, const std::string &name, const ApproximationOrder order, int verb=DEFAULT_VERBOSITY)=0
	Set order approximation of the entities in the field.

virtual MoFEMErrorCode	list_fields () const =0
	list entities in the field

virtual MoFEMErrorCode	build_fields (int verb=DEFAULT_VERBOSITY)=0

virtual MoFEMErrorCode	build_field (const std::string field_name, int verb=DEFAULT_VERBOSITY)=0
	build field by name

virtual BitFieldId	get_field_id (const std::string &name) const =0
	Get field Id.

virtual FieldBitNumber	get_field_bit_number (const std::string name) const =0
	get field bit number

virtual std::string	get_field_name (const BitFieldId id) const =0
	get field name from id

virtual EntityHandle	get_field_meshset (const std::string name) const =0
	get field meshset

virtual MoFEMErrorCode	get_field_entities_by_dimension (const std::string name, int dim, Range &ents) const =0
	get entities in the field by dimension

virtual MoFEMErrorCode	get_field_entities_by_type (const std::string name, EntityType type, Range &ents) const =0
	get entities in the field by type

virtual MoFEMErrorCode	get_field_entities_by_handle (const std::string name, Range &ents) const =0
	get entities in the field by handle

virtual bool	check_field (const std::string &name) const =0
	check if field is in database

virtual const Field *	get_field_structure (const std::string &name, enum MoFEMTypes bh=MF_EXIST) const =0
	get field structure

virtual const FiniteElement *	get_finite_element_structure (const std::string &name, enum MoFEMTypes bh=MF_EXIST) const =0
	get finite element structure

virtual bool	check_finite_element (const std::string &name) const =0
	Check if finite element is in database.

virtual MoFEMErrorCode	add_finite_element (const std::string &fe_name, enum MoFEMTypes bh=MF_EXCL, int verb=DEFAULT_VERBOSITY)=0
	add finite element

virtual MoFEMErrorCode	modify_finite_element_adjacency_table (const std::string &fe_name, const EntityType type, ElementAdjacencyFunct function)=0
	modify finite element table, only for advanced user

virtual MoFEMErrorCode	modify_finite_element_add_field_data (const std::string &fe_name, const std::string name_field)=0
	set finite element field data

virtual MoFEMErrorCode	modify_finite_element_off_field_data (const std::string &fe_name, const std::string name_field)=0
	unset finite element field data

virtual MoFEMErrorCode	modify_finite_element_add_field_row (const std::string &fe_name, const std::string name_row)=0
	set field row which finite element use

virtual MoFEMErrorCode	modify_finite_element_off_field_row (const std::string &fe_name, const std::string name_row)=0
	unset field row which finite element use

virtual MoFEMErrorCode	modify_finite_element_add_field_col (const std::string &fe_name, const std::string name_row)=0
	set field col which finite element use

virtual MoFEMErrorCode	modify_finite_element_off_field_col (const std::string &fe_name, const std::string name_row)=0
	unset field col which finite element use

virtual MoFEMErrorCode	add_ents_to_finite_element_by_type (const EntityHandle entities, const EntityType type, const std::string name, const bool recursive=true)=0
	add entities to finite element

virtual MoFEMErrorCode	add_ents_to_finite_element_by_dim (const EntityHandle entities, const int dim, const std::string name, const bool recursive=true)=0
	add entities to finite element

virtual MoFEMErrorCode	add_ents_to_finite_element_by_type (const Range ents, const EntityType type, const std::string name)=0
	add entities to finite elements

virtual MoFEMErrorCode	add_ents_to_finite_element_by_dim (const Range ents, const int dim, const std::string name)=0
	add entities to finite elements

virtual MoFEMErrorCode	add_ents_to_finite_element_by_bit_ref (const BitRefLevel bit, const BitRefLevel mask, const std::string name, EntityType type, int verb=DEFAULT_VERBOSITY)=0
	add TET entities from given refinement level to finite element database given by name

virtual EntityHandle	get_finite_element_meshset (const std::string name) const =0

virtual MoFEMErrorCode	get_finite_element_entities_by_dimension (const std::string name, int dim, Range &ents) const =0
	get entities in the finite element by dimension

virtual MoFEMErrorCode	get_finite_element_entities_by_type (const std::string name, EntityType type, Range &ents) const =0
	get entities in the finite element by type

virtual MoFEMErrorCode	get_finite_element_entities_by_handle (const std::string name, Range &ents) const =0
	get entities in the finite element by handle

virtual MoFEMErrorCode	remove_ents_from_finite_element_by_bit_ref (const BitRefLevel bit, const BitRefLevel mask, int verb=DEFAULT_VERBOSITY)=0
	remove elements from given refinement level to finite element database

virtual MoFEMErrorCode	remove_ents_from_finite_element (const std::string name, const EntityHandle meshset, const EntityType type, int verb=DEFAULT_VERBOSITY)=0
	remove entities from given refinement level to finite element database

virtual MoFEMErrorCode	remove_ents_from_finite_element (const std::string name, const Range ents, int verb=DEFAULT_VERBOSITY)=0
	remove entities from finite element database

virtual MoFEMErrorCode	remove_ents_from_finite_element (const Range ents, int verb=DEFAULT_VERBOSITY)=0
	remove entities from finite elements in database

virtual MoFEMErrorCode	add_ents_to_finite_element_by_MESHSET (const EntityHandle meshset, const std::string &name, const bool recursive=false)=0
	add MESHSET element to finite element database given by name

virtual MoFEMErrorCode	list_finite_elements () const =0
	list finite elements in database

virtual MoFEMErrorCode	add_problem (const std::string &name, enum MoFEMTypes bh=MF_EXCL, int verb=DEFAULT_VERBOSITY)=0
	Add problem.

virtual bool	check_problem (const std::string name)=0
	check if problem exist

virtual MoFEMErrorCode	delete_problem (const std::string name)=0
	Delete problem.

virtual MoFEMErrorCode	modify_problem_add_finite_element (const std::string name_problem, const std::string &fe_name)=0
	add finite element to problem, this add entities assigned to finite element to a particular problem

virtual MoFEMErrorCode	modify_problem_unset_finite_element (const std::string name_problem, const std::string &fe_name)=0
	unset finite element from problem, this remove entities assigned to finite element to a particular problem

virtual MoFEMErrorCode	modify_problem_ref_level_add_bit (const std::string &name_problem, const BitRefLevel &bit)=0
	add ref level to problem

virtual MoFEMErrorCode	modify_problem_mask_ref_level_add_bit (const std::string &name_problem, const BitRefLevel &bit)=0
	set dof mask ref level for problem

virtual MoFEMErrorCode	modify_problem_ref_level_set_bit (const std::string &name_problem, const BitRefLevel &bit)=0
	set ref level for problem

virtual MoFEMErrorCode	modify_problem_mask_ref_level_set_bit (const std::string &name_problem, const BitRefLevel &bit)=0
	set dof mask ref level for problem

virtual MoFEMErrorCode	list_problem () const =0
	list problems

virtual MoFEMErrorCode	clear_problem (const std::string name, int verb=DEFAULT_VERBOSITY)=0
	clear problem

virtual MoFEMErrorCode	clear_problems (int verb=DEFAULT_VERBOSITY)=0
	clear problems

virtual MoFEMErrorCode	get_problem_finite_elements_entities (const std::string name, const std::string &fe_name, const EntityHandle meshset)=0
	add finite elements to the meshset

virtual MoFEMErrorCode	list_dofs_by_field_name (const std::string &name) const =0

virtual MoFEMErrorCode	clear_inactive_dofs (int verb=DEFAULT_VERBOSITY)=0

virtual MoFEMErrorCode	clear_dofs_fields_by_bit_ref (const BitRefLevel bit, const BitRefLevel mask, int verb=DEFAULT_VERBOSITY)=0

virtual MoFEMErrorCode	clear_dofs_fields (const Range ents, int verb=DEFAULT_VERBOSITY)=0

virtual MoFEMErrorCode	clear_dofs_fields (const std::string name, const Range ents, int verb=DEFAULT_VERBOSITY)=0

virtual MoFEMErrorCode	clear_ents_fields (const Range ents, int verb=DEFAULT_VERBOSITY)=0

virtual MoFEMErrorCode	clear_ents_fields (const std::string name, const Range ents, int verb=DEFAULT_VERBOSITY)=0

virtual MoFEMErrorCode	clear_ents_fields_by_bit_ref (const BitRefLevel bit, const BitRefLevel mask, int verb=DEFAULT_VERBOSITY)=0

virtual MoFEMErrorCode	build_finite_elements (int verb=DEFAULT_VERBOSITY)=0
	Build finite elements.

virtual MoFEMErrorCode	build_finite_elements (const string fe_name, const Range *const ents_ptr=nullptr, int verb=DEFAULT_VERBOSITY)=0
	Build finite elements.

virtual MoFEMErrorCode	clear_finite_elements_by_bit_ref (const BitRefLevel bit, const BitRefLevel mask, int verb=DEFAULT_VERBOSITY)=0

virtual MoFEMErrorCode	clear_finite_elements (const Range &ents, int verb=DEFAULT_VERBOSITY)=0

virtual MoFEMErrorCode	clear_finite_elements (const std::string &fe_name, const Range &ents, int verb=DEFAULT_VERBOSITY)=0

virtual MoFEMErrorCode	build_adjacencies (const Range &ents, int verb=DEFAULT_VERBOSITY)=0
	build adjacencies

virtual MoFEMErrorCode	build_adjacencies (const BitRefLevel &bit, int verb=DEFAULT_VERBOSITY)=0
	build adjacencies

virtual MoFEMErrorCode	build_adjacencies (const BitRefLevel &bit, const BitRefLevel &mask, int verb=DEFAULT_VERBOSITY)=0
	build adjacencies

virtual MoFEMErrorCode	clear_adjacencies_finite_elements (const BitRefLevel bit, const BitRefLevel mask, int verb=DEFAULT_VERBOSITY)=0
	clear adjacency map for finite elements on given bit level

virtual MoFEMErrorCode	clear_adjacencies_entities (const BitRefLevel bit, const BitRefLevel mask, int verb=DEFAULT_VERBOSITY)=0
	clear adjacency map for entities on given bit level

virtual MoFEMErrorCode	clear_adjacencies_entities (const Range ents, int verb=DEFAULT_VERBOSITY)=0
	clear adjacencies for field entities by entities

virtual MoFEMErrorCode	clear_adjacencies_entities (const std::string name, const Range ents, int verb=DEFAULT_VERBOSITY)=0
	clear adjacencies for field entities by entities and field namd

virtual MoFEMErrorCode	problem_basic_method_preProcess (const Problem *problem_ptr, BasicMethod &method, int verb=DEFAULT_VERBOSITY)=0
	Set data for BasicMethod.

virtual MoFEMErrorCode	problem_basic_method_preProcess (const std::string &problem_name, BasicMethod &method, int verb=DEFAULT_VERBOSITY)=0
	Set data for BasicMethod.

virtual MoFEMErrorCode	problem_basic_method_postProcess (const Problem *problem_ptr, BasicMethod &method, int verb=DEFAULT_VERBOSITY)=0
	Set data for BasicMethod.

virtual MoFEMErrorCode	problem_basic_method_postProcess (const std::string &problem_name, BasicMethod &method, int verb=DEFAULT_VERBOSITY)=0
	Set data for BasicMethod.

virtual MoFEMErrorCode	cache_problem_entities (const std::string prb_name, CacheTupleWeakPtr cache_ptr)=0
	Cache variables.

virtual MoFEMErrorCode	loop_finite_elements (const std::string problem_name, const std::string &fe_name, FEMethod &method, boost::shared_ptr< NumeredEntFiniteElement_multiIndex > fe_ptr=nullptr, MoFEMTypes bh=MF_EXIST, CacheTupleWeakPtr cache_ptr=CacheTupleSharedPtr(), int verb=DEFAULT_VERBOSITY)=0
	Make a loop over finite elements.

virtual MoFEMErrorCode	loop_finite_elements (const Problem *problem_ptr, const std::string &fe_name, FEMethod &method, int lower_rank, int upper_rank, boost::shared_ptr< NumeredEntFiniteElement_multiIndex > fe_ptr=nullptr, MoFEMTypes bh=MF_EXIST, CacheTupleWeakPtr cache_ptr=CacheTupleSharedPtr(), int verb=DEFAULT_VERBOSITY)=0
	Make a loop over finite elements on partitions from upper to lower rank.

virtual MoFEMErrorCode	loop_finite_elements (const std::string problem_name, const std::string &fe_name, FEMethod &method, int lower_rank, int upper_rank, boost::shared_ptr< NumeredEntFiniteElement_multiIndex > fe_ptr=nullptr, MoFEMTypes bh=MF_EXIST, CacheTupleWeakPtr cache_ptr=CacheTupleSharedPtr(), int verb=DEFAULT_VERBOSITY)=0
	Make a loop over finite elements on partitions from upper to lower rank.

virtual MoFEMErrorCode	loop_dofs (const Problem *problem_ptr, const std::string &field_name, RowColData rc, DofMethod &method, int lower_rank, int upper_rank, int verb=DEFAULT_VERBOSITY)=0
	Make a loop over dofs.

virtual MoFEMErrorCode	loop_dofs (const std::string &problem_name, const std::string &field_name, RowColData rc, DofMethod &method, int lower_rank, int upper_rank, int verb=DEFAULT_VERBOSITY)=0
	Make a loop over dofs.

virtual MoFEMErrorCode	loop_dofs (const std::string &problem_name, const std::string &field_name, RowColData rc, DofMethod &method, int verb=DEFAULT_VERBOSITY)=0
	Make a loop over dofs.

virtual MoFEMErrorCode	loop_dofs (const std::string &field_name, DofMethod &method, int verb=DEFAULT_VERBOSITY)=0
	Make a loop over dofs.

virtual MoFEMErrorCode	loop_entities (const std::string field_name, EntityMethod &method, Range const *const ents=nullptr, int verb=DEFAULT_VERBOSITY)=0
	Loop over field entities.

virtual MoFEMErrorCode	loop_entities (const Problem *problem_ptr, const std::string field_name, RowColData rc, EntityMethod &method, int lower_rank, int upper_rank, int verb=DEFAULT_VERBOSITY)=0
	Loop over field entities in the problem.

virtual MoFEMErrorCode	loop_entities (const std::string problem_name, const std::string field_name, RowColData rc, EntityMethod &method, int lower_rank, int upper_rank, int verb=DEFAULT_VERBOSITY)=0
	Loop over field entities in the problem.

virtual MoFEMErrorCode	loop_entities (const std::string problem_name, const std::string field_name, RowColData rc, EntityMethod &method, int verb=DEFAULT_VERBOSITY)=0
	Loop over field entities in the problem.

virtual const Field_multiIndex *	get_fields () const =0
	Get the fields object.

virtual const RefEntity_multiIndex *	get_ref_ents () const =0
	Get the ref ents object.

virtual const RefElement_multiIndex *	get_ref_finite_elements () const =0
	Get the ref finite elements object.

virtual const FiniteElement_multiIndex *	get_finite_elements () const =0
	Get the finite elements object.

virtual const EntFiniteElement_multiIndex *	get_ents_finite_elements () const =0
	Get the ents finite elements object.

virtual const FieldEntity_multiIndex *	get_field_ents () const =0
	Get the field ents object.

virtual const DofEntity_multiIndex *	get_dofs () const =0
	Get the dofs object.

virtual const Problem *	get_problem (const std::string problem_name) const =0
	Get the problem object.

virtual const Problem_multiIndex *	get_problems () const =0
	Get the problems object.

virtual MoFEMErrorCode	get_ents_elements_adjacency (const FieldEntityEntFiniteElementAdjacencyMap_multiIndex **dofs_elements_adjacency) const =0
	Get the dofs elements adjacency object.

virtual const FieldEntityEntFiniteElementAdjacencyMap_multiIndex *	get_ents_elements_adjacency () const =0
	Get the dofs elements adjacency object.

virtual MoFEMErrorCode	get_fields (const Field_multiIndex **fields_ptr) const =0
	Get fields multi-index from database.

virtual MoFEMErrorCode	get_ref_ents (const RefEntity_multiIndex **refined_ents_ptr) const =0
	Get ref entities multi-index from database.

virtual MoFEMErrorCode	get_ref_finite_elements (const RefElement_multiIndex **refined_finite_elements_ptr) const =0
	Get ref finite elements multi-index form database.

virtual MoFEMErrorCode	get_finite_elements (const FiniteElement_multiIndex **fe_ptr) const =0
	Get finite elements multi-index.

virtual MoFEMErrorCode	get_ents_finite_elements (const EntFiniteElement_multiIndex **fe_ent_ptr) const =0
	Get entities finite elements multi-index.

virtual MoFEMErrorCode	get_problem (const std::string &problem_name, const Problem **problem_ptr) const =0
	Get problem database (data structure)

virtual MoFEMErrorCode	get_problems (const Problem_multiIndex **problems_ptr) const =0
	Get pointer to problems multi-index.

virtual MoFEMErrorCode	get_field_ents (const FieldEntity_multiIndex **field_ents) const =0
	Get field multi index.

virtual MoFEMErrorCode	get_dofs (const DofEntity_multiIndex **dofs_ptr) const =0
	Get dofs multi index.

virtual FieldEntityByUId::iterator	get_ent_field_by_name_begin (const std::string &field_name) const =0
	get begin iterator of field ents of given name (instead you can use IT_GET_ENT_FIELD_BY_NAME_FOR_LOOP(MFIELD,NAME,IT)

virtual FieldEntityByUId::iterator	get_ent_field_by_name_end (const std::string &field_name) const =0
	get end iterator of field ents of given name (instead you can use IT_GET_ENT_FIELD_BY_NAME_FOR_LOOP(MFIELD,NAME,IT)

virtual DofEntityByUId::iterator	get_dofs_by_name_begin (const std::string &field_name) const =0
	get begin iterator of field dofs of given name (instead you can use IT_GET_DOFS_FIELD_BY_NAME_FOR_LOOP(MFIELD,NAME,IT)

virtual DofEntityByUId::iterator	get_dofs_by_name_end (const std::string &field_name) const =0
	get begin iterator of field dofs of given name (instead you can use IT_GET_DOFS_FIELD_BY_NAME_FOR_LOOP(MFIELD,NAME,IT)

virtual DofEntityByUId::iterator	get_dofs_by_name_and_ent_begin (const std::string &field_name, const EntityHandle ent) const =0
	get begin iterator of field dofs of given name and ent(instead you can use IT_GET_DOFS_FIELD_BY_NAME_FOR_LOOP(MFIELD,NAME,ENT,IT)

virtual DofEntityByUId::iterator	get_dofs_by_name_and_ent_end (const std::string &field_name, const EntityHandle ent) const =0
	get end iterator of field dofs of given name and ent (instead you can use IT_GET_DOFS_FIELD_BY_NAME_FOR_LOOP(MFIELD,NAME,ENT,IT)

virtual DofEntityByUId::iterator	get_dofs_by_name_and_type_begin (const std::string &field_name, const EntityType type) const =0
	get begin iterator of field dofs of given name and ent type (instead you can use IT_GET_DOFS_FIELD_BY_NAME_FOR_LOOP(MFIELD,NAME,TYPE,IT)

virtual DofEntityByUId::iterator	get_dofs_by_name_and_type_end (const std::string &field_name, const EntityType type) const =0
	get end iterator of field dofs of given name and ent type(instead you can use IT_GET_DOFS_FIELD_BY_NAME_FOR_LOOP(MFIELD,NAME,TYPE,IT)

virtual EntFiniteElement_multiIndex::index< Unique_mi_tag >::type::iterator	get_fe_by_name_begin (const std::string &fe_name) const =0
	get begin iterator of finite elements of given name (instead you can use IT_GET_FES_BY_NAME_FOR_LOOP(MFIELD,NAME,IT)

virtual EntFiniteElement_multiIndex::index< Unique_mi_tag >::type::iterator	get_fe_by_name_end (const std::string &fe_name) const =0
	get end iterator of finite elements of given name (instead you can use IT_GET_FES_BY_NAME_FOR_LOOP(MFIELD,NAME,IT)

Public Member Functions inherited from MoFEM::UnknownInterface
virtual MoFEMErrorCode	query_interface (boost::typeindex::type_index type_index, UnknownInterface **iface) const =0

template<class IFACE >
MoFEMErrorCode	registerInterface (bool error_if_registration_failed=true)
	Register interface.

template<class IFACE >
MoFEMErrorCode	getInterface (IFACE *&iface) const
	Get interface reference to pointer of interface.

template<class IFACE >
MoFEMErrorCode	getInterface (IFACE **const iface) const
	Get interface pointer to pointer of interface.

template<class IFACE , typename boost::enable_if< boost::is_pointer< IFACE >, int >::type = 0>
IFACE	getInterface () const
	Get interface pointer to pointer of interface.

template<class IFACE , typename boost::enable_if< boost::is_reference< IFACE >, int >::type = 0>
IFACE	getInterface () const
	Get reference to interface.

template<class IFACE >
IFACE *	getInterface () const
	Function returning pointer to interface.

virtual	~UnknownInterface ()=default

Static Public Member Functions inherited from MoFEM::UnknownInterface
static MoFEMErrorCode	getLibVersion (Version &version)
	Get library version.

static MoFEMErrorCode	getFileVersion (moab::Interface &moab, Version &version)
	Get database major version.

static MoFEMErrorCode	setFileVersion (moab::Interface &moab, Version version=Version(MoFEM_VERSION_MAJOR, MoFEM_VERSION_MINOR, MoFEM_VERSION_BUILD))
	Get database major version.

static MoFEMErrorCode	getInterfaceVersion (Version &version)
	Get database major version.

Detailed Description

Deprecated interface functions.

Examples: ep.cpp, mofem/atom_tests/add_blockset.cpp, mofem/atom_tests/add_cubit_meshsets.cpp, mofem/atom_tests/bernstein_bezier_generate_base.cpp, mofem/atom_tests/boundary_marker.cpp, mofem/atom_tests/build_composite_problem.cpp, mofem/atom_tests/build_large_problem.cpp, mofem/atom_tests/build_problems.cpp, mofem/atom_tests/child_and_parent.cpp, mofem/atom_tests/continuity_check_on_contact_prism_side_ele.cpp, mofem/atom_tests/continuity_check_on_skeleton_3d.cpp, mofem/atom_tests/continuity_check_on_skeleton_with_simple_2d_for_h1.cpp, mofem/atom_tests/continuity_check_on_skeleton_with_simple_2d_for_hcurl.cpp, mofem/atom_tests/continuity_check_on_skeleton_with_simple_2d_for_hdiv.cpp, mofem/atom_tests/cubit_bc_test.cpp, mofem/atom_tests/dg_projection.cpp, mofem/atom_tests/dm_build_partitioned_mesh.cpp, mofem/atom_tests/dm_create_subdm.cpp, mofem/atom_tests/dm_partitioned_no_field.cpp, mofem/atom_tests/field_blas.cpp, mofem/atom_tests/field_blas_axpy.cpp, mofem/atom_tests/field_evaluator.cpp, mofem/atom_tests/forces_and_sources_testing_edge_element.cpp, mofem/atom_tests/forces_and_sources_testing_flat_prism_element.cpp, mofem/atom_tests/forces_and_sources_testing_users_base.cpp, mofem/atom_tests/hanging_node_approx.cpp, mofem/atom_tests/hcurl_check_approx_in_2d.cpp, mofem/atom_tests/hcurl_curl_operator.cpp, mofem/atom_tests/hcurl_divergence_operator_2d.cpp, mofem/atom_tests/hdiv_check_approx_in_3d.cpp, mofem/atom_tests/hdiv_divergence_operator.cpp, mofem/atom_tests/higher_derivatives.cpp, mofem/atom_tests/log.cpp, mofem/atom_tests/loop_entities.cpp, mofem/atom_tests/mesh_insert_interface_atom.cpp, mofem/atom_tests/node_merge.cpp, mofem/atom_tests/operators_tests.cpp, mofem/atom_tests/partition_mesh.cpp, mofem/atom_tests/prism_elements_from_surface.cpp, mofem/atom_tests/prism_polynomial_approximation.cpp, mofem/atom_tests/quad_polynomial_approximation.cpp, mofem/atom_tests/remove_entities_from_problem.cpp, mofem/atom_tests/remove_entities_from_problem_not_partitioned.cpp, mofem/atom_tests/scalar_check_approximation.cpp, mofem/atom_tests/schur_test_diag_mat.cpp, mofem/atom_tests/simple_interface.cpp, mofem/atom_tests/simple_l2_only.cpp, mofem/atom_tests/tensor_divergence_operator.cpp, mofem/atom_tests/test_broken_space.cpp, mofem/atom_tests/test_cache_on_entities.cpp, mofem/tools/field_to_vertices.cpp, mofem/tools/mesh_smoothing.cpp, mofem/tools/meshset_to_vtk.cpp, mofem/tools/remove_mofem_meshsets.cpp, mofem/tools/split_sideset.cpp, mofem/tutorials/adv-0/plastic.cpp, mofem/tutorials/adv-0/src/PlasticOps.hpp, mofem/tutorials/adv-0/src/PlasticOpsMonitor.hpp, mofem/tutorials/adv-1/src/ContactOps.hpp, mofem/tutorials/adv-2/src/ThermoElasticOps.hpp, mofem/tutorials/adv-2/thermo_elastic.cpp, mofem/tutorials/adv-3/level_set.cpp, mofem/tutorials/adv-4/dynamic_first_order_con_law.cpp, mofem/tutorials/adv-5/seepage.cpp, mofem/tutorials/clx-0/helmholtz.cpp, mofem/tutorials/cor-0to1/src/UnsaturatedFlow.hpp, mofem/tutorials/cor-0to1/unsaturated_transport.cpp, mofem/tutorials/cor-10/navier_stokes.cpp, mofem/tutorials/cor-2to5/analytical_nonlinear_poisson.cpp, mofem/tutorials/cor-2to5/analytical_poisson.cpp, mofem/tutorials/cor-2to5/analytical_poisson_field_split.cpp, mofem/tutorials/cor-2to5/src/AuxPoissonFunctions.hpp, mofem/tutorials/cor-2to5/src/PoissonOperators.hpp, mofem/tutorials/cor-6/simple_elasticity.cpp, mofem/tutorials/cor-7/elasticity_mixed_formulation.cpp, mofem/tutorials/cor-7/src/ElasticityMixedFormulation.hpp, mofem/tutorials/cor-9/reaction_diffusion.cpp, mofem/tutorials/fun-0/hello_world.cpp, mofem/tutorials/fun-1/integration.cpp, mofem/tutorials/fun-2/plot_base.cpp, mofem/tutorials/max-0/magnetostatic.cpp, mofem/tutorials/max-0/src/MagneticElement.hpp, mofem/tutorials/max-1/lorentz_force.cpp, mofem/tutorials/mix-0/mixed_poisson.cpp, mofem/tutorials/mix-1/phase.cpp, mofem/tutorials/scl-0/approximaton.cpp, mofem/tutorials/scl-1/poisson_2d_homogeneous.cpp, mofem/tutorials/scl-10/initial_diffusion.cpp, mofem/tutorials/scl-10/photon_diffusion.cpp, mofem/tutorials/scl-11/poisson_2d_dis_galerkin.cpp, mofem/tutorials/scl-12/electrostatics.cpp, mofem/tutorials/scl-6/heat_equation.cpp, mofem/tutorials/scl-7/wave_equation.cpp, mofem/tutorials/scl-8/radiation.cpp, mofem/tutorials/scl-9/heat_method.cpp, mofem/tutorials/vec-0/elastic.cpp, mofem/tutorials/vec-1/eigen_elastic.cpp, mofem/tutorials/vec-10/schur_elastic.cpp, mofem/tutorials/vec-2/nonlinear_elastic.cpp, mofem/tutorials/vec-2/src/HenckyOps.hpp, mofem/tutorials/vec-2/src/NonlinearElasticExample.hpp, mofem/tutorials/vec-3/nonlinear_dynamic_elastic.cpp, mofem/tutorials/vec-4/approx_sphere.cpp, mofem/tutorials/vec-4/shallow_wave.cpp, mofem/tutorials/vec-5/free_surface.cpp, mofem/tutorials/vec-6/plate.cpp, mofem/tutorials/vec-7/adjoint.cpp, mofem/tutorials/vec-9/arc_length.cpp, mofem/tutorials/vec-9/src/ArcLengthExample.hpp, mofem/users_modules/adolc-plasticity/adolc_plasticity.cpp, mofem/users_modules/adolc-plasticity/src/ADOLCPlasticity.hpp, mofem/users_modules/adolc-plasticity/src/ADOLCPlasticityLargeStrain.hpp, mofem/users_modules/adolc-plasticity/src/ADOLCPlasticityMaterialModels.hpp, mofem/users_modules/basic_finite_elements/atom_tests/testing_jacobian_of_hook_element.cpp, mofem/users_modules/basic_finite_elements/atom_tests/testing_jacobian_of_hook_scaled_with_density_element.cpp, mofem/users_modules/basic_finite_elements/elasticity/elasticity.cpp, mofem/users_modules/basic_finite_elements/nonlinear_elastic_materials/src/NonlinearElasticElementInterface.hpp, mofem/users_modules/basic_finite_elements/nonlinear_elasticity/nonlinear_dynamics.cpp, mofem/users_modules/basic_finite_elements/src/HookeElement.hpp, mofem/users_modules/basic_finite_elements/src/NavierStokesElement.hpp, mofem/users_modules/basic_finite_elements/src/impl/HookeElement.cpp, mofem/users_modules/bone_remodelling/bone_adaptation.cpp, mofem/users_modules/bone_remodelling/src/Remodeling.hpp, mofem/users_modules/bone_remodelling/src/impl/Remodeling.cpp, mofem/users_modules/eshelbian_plasticity/ep.cpp, mofem/users_modules/eshelbian_plasticity/src/impl/EshelbianPlasticity.cpp, and mofem/users_modules/minimal_surface_equation/minimal_surface_area.cpp.

Definition at line 16 of file DeprecatedCoreInterface.hpp.

Member Function Documentation

◆ partition_mesh()

MoFEMErrorCode MoFEM::DeprecatedCoreInterface::partition_mesh	(	const Range &	ents,
		const int	dim,
		const int	adj_dim,
		const int	n_parts,
		int	verb = `-1`
	)

Set partition tag to each finite element in the problem.

This will use one of the mesh partitioning programs available from PETSc See http://www.mcs.anl.gov/petsc/petsc-current/docs/manualpages/Mat/MatPartitioningType.html

Parameters

ents	Entities to partition
dim	Dimension of entities to partition
adj_dim	Adjacency dimension
n_parts	Number of partitions
verb	Verbosity level

Returns: Error code

Definition at line 32 of file DeprecatedCoreInterface.cpp.

                                                                 {
  return getInterface<CommInterface>()->partitionMesh(
      ents, dim, adj_dim, n_parts, NULL, NULL, NULL, verb);
}

◆ seed_ref_level()

MoFEMErrorCode MoFEM::DeprecatedCoreInterface::seed_ref_level	(	const Range &	ents,
		const BitRefLevel &	bit,
		const bool	only_tets = `true`,
		int	verb = `-1`
	)

seed entities in the range and their adjacencies in a particular BitRefLevel

Deprecated:: use BitRefManager

Todo:: Should be outsourced to separate interface, i.e. BitLevelManager

Definition at line 24 of file DeprecatedCoreInterface.cpp.

                                                                 {
  return getInterface<BitRefManager>()->setBitRefLevel(ents, bit, only_tets,
                                                       verb);
}

◆ seed_ref_level_2D()

MoFEMErrorCode MoFEM::DeprecatedCoreInterface::seed_ref_level_2D	(	const EntityHandle	meshset,
		const BitRefLevel &	bit,
		int	verb = `-1`
	)

virtual

seed 2D entities (Triangles entities only) in the meshset and their adjacencies (only TRIs adjacencies) in a particular BitRefLevel

Deprecated:: use BitRefManager

Todo:: Should be outsourced to separate interface, i.e. BitLevelManager

Parameters

EntityHandle	MeshSet
BitRefLevel	bitLevel

Definition at line 11 of file DeprecatedCoreInterface.cpp.

                                                                             {
  return getInterface<BitRefManager>()->setBitRefLevelByDim(meshset, 2, bit,
                                                            verb);
}

◆ seed_ref_level_3D()

MoFEMErrorCode MoFEM::DeprecatedCoreInterface::seed_ref_level_3D	(	const EntityHandle	meshset,
		const BitRefLevel &	bit,
		int	verb = `-1`
	)

seed 2D entities in the meshset and their adjacencies (only TETs adjacencies) in a particular BitRefLevel

Deprecated:: use BitRefManager

Todo:: Should be outsourced to separate interface, i.e. BitLevelManager

Parameters

EntityHandle	MeshSet
BitRefLevel	bitLevel

Example:

EntityHandle meshset1; //contains ent1,ent2,ent3
BitRefLevel myLevel0;
myLevel0.set(0);
seed_ref_level_3D(meshset1,myLevel0);
//refine meshset1 into meshset2 and get new ents which are ent4, ent5
EntityHandle meshset2; //contains ent1,ent2,ent3,ent4,ent5
BitRefLevel myLevel1;
myLevel1.set(1);
seed_ref_level_3D(meshset2,myLevel1);  

So entities 1,2,3 would be assigned to bit level 0 and 1
ent1[1,1,0,0,0,0,0], ent2[1,1,0,0,0,0,0], ent3[1,1,0,0,0,0,0],
and entities 4 and 5 are assigned to bit level 1 only
ent4[0,1,0,0,0,0,0], ent5[0,1,0,0,0,0,0]

Definition at line 18 of file DeprecatedCoreInterface.cpp.

                                                                             {
  return getInterface<BitRefManager>()->setBitRefLevelByDim(meshset, 3, bit,
                                                            verb);
}

◆ synchronise_entities()

MoFEMErrorCode MoFEM::DeprecatedCoreInterface::synchronise_entities	(	Range &	ent,
		int	verb = `DEFAULT_VERBOSITY`
	)

synchronize entity range on processors (collective)

collective - need to be run on all processors in communicator

Deprecated:: Use Comm Interface

Definition at line 41 of file DeprecatedCoreInterface.cpp.

                                                                       {
  return getInterface<CommInterface>()->synchroniseEntities(ent, nullptr, verb);
}

The documentation for this struct was generated from the following files:

src/interfaces/DeprecatedCoreInterface.hpp
src/interfaces/impl/DeprecatedCoreInterface.cpp

Seed entities

Synchronize

Additional Inherited Members

Detailed Description

Member Function Documentation

◆ partition_mesh()

◆ seed_ref_level()

◆ seed_ref_level_2D()

◆ seed_ref_level_3D()

◆ synchronise_entities()