v0.14.0
Public Member Functions | Public Attributes | List of all members
FractureMechanics::OpLhsBoneExplicitDerivariveWithHooke_dx Struct Reference

#include <users_modules/fracture_mechanics/src/CrackFrontElement.hpp>

Inheritance diagram for FractureMechanics::OpLhsBoneExplicitDerivariveWithHooke_dx:
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Collaboration diagram for FractureMechanics::OpLhsBoneExplicitDerivariveWithHooke_dx:
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Public Member Functions

 OpLhsBoneExplicitDerivariveWithHooke_dx (HookeElement::DataAtIntegrationPts &common_data, boost::shared_ptr< VectorDouble > rho_at_gauss_pts, boost::shared_ptr< MatrixDouble > diff_rho_at_gauss_pts, boost::shared_ptr< MatrixDouble > diff_diff_rho_at_gauss_pts, MatrixDouble &singular_displ, Range tets_in_block, const double rho_0, const double bone_n, Range *forces_only_on_entities_row=NULL)
 
MoFEMErrorCode doWork (int row_side, int col_side, EntityType row_type, EntityType col_type, DataForcesAndSourcesCore::EntData &row_data, DataForcesAndSourcesCore::EntData &col_data)
 
- Public Member Functions inherited from MoFEM::VolumeElementForcesAndSourcesCore::UserDataOperator
int getNumNodes ()
 get element number of nodes More...
 
const EntityHandlegetConn ()
 get element connectivity More...
 
double getVolume () const
 element volume (linear geometry) More...
 
doublegetVolume ()
 element volume (linear geometry) More...
 
FTensor::Tensor2< double *, 3, 3 > & getJac ()
 get element Jacobian More...
 
FTensor::Tensor2< double *, 3, 3 > & getInvJac ()
 get element inverse Jacobian More...
 
VectorDoublegetCoords ()
 nodal coordinates More...
 
VolumeElementForcesAndSourcesCoregetVolumeFE () const
 return pointer to Generic Volume Finite Element object More...
 
- Public Member Functions inherited from MoFEM::ForcesAndSourcesCore::UserDataOperator
 UserDataOperator (const FieldSpace space, const char type=OPSPACE, const bool symm=true)
 
 UserDataOperator (const std::string field_name, const char type, const bool symm=true)
 
 UserDataOperator (const std::string row_field_name, const std::string col_field_name, const char type, const bool symm=true)
 
boost::shared_ptr< const NumeredEntFiniteElementgetNumeredEntFiniteElementPtr () const
 Return raw pointer to NumeredEntFiniteElement. More...
 
EntityHandle getFEEntityHandle () const
 Return finite element entity handle. More...
 
int getFEDim () const
 Get dimension of finite element. More...
 
EntityType getFEType () const
 Get dimension of finite element. More...
 
boost::weak_ptr< SideNumbergetSideNumberPtr (const int side_number, const EntityType type)
 Get the side number pointer. More...
 
EntityHandle getSideEntity (const int side_number, const EntityType type)
 Get the side entity. More...
 
int getNumberOfNodesOnElement () const
 Get the number of nodes on finite element. More...
 
MoFEMErrorCode getProblemRowIndices (const std::string filed_name, const EntityType type, const int side, VectorInt &indices) const
 Get row indices. More...
 
MoFEMErrorCode getProblemColIndices (const std::string filed_name, const EntityType type, const int side, VectorInt &indices) const
 Get col indices. More...
 
const FEMethodgetFEMethod () const
 Return raw pointer to Finite Element Method object. More...
 
int getOpType () const
 Get operator types. More...
 
void setOpType (const OpType type)
 Set operator type. More...
 
void addOpType (const OpType type)
 Add operator type. More...
 
int getNinTheLoop () const
 get number of finite element in the loop More...
 
int getLoopSize () const
 get size of elements in the loop More...
 
std::string getFEName () const
 Get name of the element. More...
 
ForcesAndSourcesCoregetPtrFE () const
 
ForcesAndSourcesCoregetSidePtrFE () const
 
ForcesAndSourcesCoregetRefinePtrFE () const
 
const PetscData::SwitchesgetDataCtx () const
 
const KspMethod::KSPContext getKSPCtx () const
 
const SnesMethod::SNESContext getSNESCtx () const
 
const TSMethod::TSContext getTSCtx () const
 
Vec getKSPf () const
 
Mat getKSPA () const
 
Mat getKSPB () const
 
Vec getSNESf () const
 
Vec getSNESx () const
 
Mat getSNESA () const
 
Mat getSNESB () const
 
Vec getTSu () const
 
Vec getTSu_t () const
 
Vec getTSu_tt () const
 
Vec getTSf () const
 
Mat getTSA () const
 
Mat getTSB () const
 
int getTSstep () const
 
double getTStime () const
 
double getTStimeStep () const
 
double getTSa () const
 
double getTSaa () const
 
MatrixDoublegetGaussPts ()
 matrix of integration (Gauss) points for Volume Element More...
 
auto getFTensor0IntegrationWeight ()
 Get integration weights. More...
 
MatrixDoublegetCoordsAtGaussPts ()
 Gauss points and weight, matrix (nb. of points x 3) More...
 
auto getFTensor1CoordsAtGaussPts ()
 Get coordinates at integration points assuming linear geometry. More...
 
double getMeasure () const
 get measure of element More...
 
doublegetMeasure ()
 get measure of element More...
 
MoFEMErrorCode loopSide (const string &fe_name, ForcesAndSourcesCore *side_fe, const size_t dim, const EntityHandle ent_for_side=0, const int verb=QUIET, const LogManager::SeverityLevel sev=Sev::noisy, AdjCache *adj_cache=nullptr)
 User calls this function to loop over elements on the side of face. This function calls finite element with its operator to do calculations. More...
 
MoFEMErrorCode loopThis (const string &fe_name, ForcesAndSourcesCore *this_fe, const int verb=QUIET, const LogManager::SeverityLevel sev=Sev::noisy)
 User calls this function to loop over the same element using a different set of integration points. This function calls finite element with its operator to do calculations. More...
 
MoFEMErrorCode loopParent (const string &fe_name, ForcesAndSourcesCore *parent_fe, const int verb=QUIET, const LogManager::SeverityLevel sev=Sev::noisy)
 User calls this function to loop over parent elements. This function calls finite element with its operator to do calculations. More...
 
MoFEMErrorCode loopChildren (const string &fe_name, ForcesAndSourcesCore *child_fe, const int verb=QUIET, const LogManager::SeverityLevel sev=Sev::noisy)
 User calls this function to loop over parent elements. This function calls finite element with its operator to do calculations. More...
 
- Public Member Functions inherited from MoFEM::DataOperator
 DataOperator (const bool symm=true)
 
virtual ~DataOperator ()=default
 
virtual MoFEMErrorCode doWork (int row_side, int col_side, EntityType row_type, EntityType col_type, EntitiesFieldData::EntData &row_data, EntitiesFieldData::EntData &col_data)
 Operator for bi-linear form, usually to calculate values on left hand side. More...
 
virtual MoFEMErrorCode opLhs (EntitiesFieldData &row_data, EntitiesFieldData &col_data)
 
virtual MoFEMErrorCode doWork (int side, EntityType type, EntitiesFieldData::EntData &data)
 Operator for linear form, usually to calculate values on right hand side. More...
 
virtual MoFEMErrorCode opRhs (EntitiesFieldData &data, const bool error_if_no_base=false)
 
bool getSymm () const
 Get if operator uses symmetry of DOFs or not. More...
 
void setSymm ()
 set if operator is executed taking in account symmetry More...
 
void unSetSymm ()
 unset if operator is executed for non symmetric problem More...
 

Public Attributes

HookeElement::DataAtIntegrationPts & commonData
 
boost::shared_ptr< VectorDouble > rhoAtGaussPts
 
boost::shared_ptr< MatrixDouble > diffRhoAtGaussPts
 
boost::shared_ptr< MatrixDouble > diffDiffRhoAtGaussPts
 
MatrixDouble & singularDispl
 
Range tetsInBlock
 
const double rHo0
 
const double boneN
 
Range forcesOnlyOnEntitiesRow
 
ublas::vector< int > iNdices
 
MatrixDouble nA
 
- Public Attributes inherited from MoFEM::ForcesAndSourcesCore::UserDataOperator
char opType
 
std::string rowFieldName
 
std::string colFieldName
 
FieldSpace sPace
 
- Public Attributes inherited from MoFEM::DataOperator
DoWorkLhsHookFunType doWorkLhsHook
 
DoWorkRhsHookFunType doWorkRhsHook
 
bool sYmm
 If true assume that matrix is symmetric structure. More...
 
std::array< bool, MBMAXTYPE > doEntities
 If true operator is executed for entity. More...
 
booldoVertices
 \deprectaed If false skip vertices More...
 
booldoEdges
 \deprectaed If false skip edges More...
 
booldoQuads
 \deprectaed More...
 
booldoTris
 \deprectaed More...
 
booldoTets
 \deprectaed More...
 
booldoPrisms
 \deprectaed More...
 

Additional Inherited Members

- Public Types inherited from MoFEM::ForcesAndSourcesCore::UserDataOperator
enum  OpType {
  OPROW = 1 << 0, OPCOL = 1 << 1, OPROWCOL = 1 << 2, OPSPACE = 1 << 3,
  OPLAST = 1 << 3
}
 Controls loop over entities on element. More...
 
using AdjCache = std::map< EntityHandle, std::vector< boost::weak_ptr< NumeredEntFiniteElement > >>
 
- Public Types inherited from MoFEM::DataOperator
using DoWorkLhsHookFunType = boost::function< MoFEMErrorCode(DataOperator *op_ptr, int row_side, int col_side, EntityType row_type, EntityType col_type, EntitiesFieldData::EntData &row_data, EntitiesFieldData::EntData &col_data)>
 
using DoWorkRhsHookFunType = boost::function< MoFEMErrorCode(DataOperator *op_ptr, int side, EntityType type, EntitiesFieldData::EntData &data)>
 
- Static Public Attributes inherited from MoFEM::ForcesAndSourcesCore::UserDataOperator
static const char *const OpTypeNames []
 
- Protected Member Functions inherited from MoFEM::VolumeElementForcesAndSourcesCore::UserDataOperator
MoFEMErrorCode setPtrFE (ForcesAndSourcesCore *ptr)
 
- Protected Attributes inherited from MoFEM::ForcesAndSourcesCore::UserDataOperator
ForcesAndSourcesCoreptrFE
 

Detailed Description

Definition at line 638 of file CrackFrontElement.hpp.

Constructor & Destructor Documentation

◆ OpLhsBoneExplicitDerivariveWithHooke_dx()

FractureMechanics::OpLhsBoneExplicitDerivariveWithHooke_dx::OpLhsBoneExplicitDerivariveWithHooke_dx ( HookeElement::DataAtIntegrationPts &  common_data,
boost::shared_ptr< VectorDouble >  rho_at_gauss_pts,
boost::shared_ptr< MatrixDouble >  diff_rho_at_gauss_pts,
boost::shared_ptr< MatrixDouble >  diff_diff_rho_at_gauss_pts,
MatrixDouble &  singular_displ,
Range  tets_in_block,
const double  rho_0,
const double  bone_n,
Range forces_only_on_entities_row = NULL 
)

Definition at line 746 of file CrackFrontElement.cpp.

754  "MESH_NODE_POSITIONS", "SPATIAL_POSITION", UserDataOperator::OPROWCOL,
755  false),
756  commonData(common_data), rhoAtGaussPts(rho_at_gauss_pts),
757  diffRhoAtGaussPts(diff_rho_at_gauss_pts),
758  diffDiffRhoAtGaussPts(diff_diff_rho_at_gauss_pts),
759  singularDispl(singular_displ), tetsInBlock(tets_in_block), rHo0(rho_0),
760  boneN(bone_n) {
761  if (forces_only_on_entities_row)
762  forcesOnlyOnEntitiesRow = *forces_only_on_entities_row;
763 }

Member Function Documentation

◆ doWork()

MoFEMErrorCode FractureMechanics::OpLhsBoneExplicitDerivariveWithHooke_dx::doWork ( int  row_side,
int  col_side,
EntityType  row_type,
EntityType  col_type,
DataForcesAndSourcesCore::EntData row_data,
DataForcesAndSourcesCore::EntData col_data 
)

Definition at line 765 of file CrackFrontElement.cpp.

768  {
770  if (tetsInBlock.find(getFEEntityHandle()) == tetsInBlock.end()) {
772  }
773  const int row_nb_dofs = row_data.getIndices().size();
774  if (!row_nb_dofs) {
776  }
777  const int col_nb_dofs = col_data.getIndices().size();
778  if (!col_nb_dofs) {
780  }
781  nA.resize(row_nb_dofs, col_nb_dofs, false);
782  nA.clear();
783 
784  const int nb_row_base = row_data.getN().size2();
785  const int nb_gauss_pts = row_data.getN().size1();
786 
787  auto t_initial_singular_displacement = getFTensor1FromMat<3>(singularDispl);
788  auto t_row_diff_n = row_data.getFTensor1DiffN<3>();
789 
790  auto t_H = getFTensor2FromMat<3, 3>(*(commonData.HMat));
791  auto t_h = getFTensor2FromMat<3, 3>(*(commonData.hMat));
792  auto det_H = getFTensor0FromVec(*commonData.detHVec);
793  auto t_invH = getFTensor2FromMat<3, 3>(*commonData.invHMat);
794  auto energy = getFTensor0FromVec(*commonData.energyVec);
795 
796  auto t_cauchy_stress =
797  getFTensor2SymmetricFromMat<3>(*(commonData.cauchyStressMat));
799 
800  auto t_diff_rho = getFTensor1FromMat<3>(*diffRhoAtGaussPts);
801 
808 
809  for (int gg = 0; gg != nb_gauss_pts; ++gg) {
810  double val = getVolume() * getGaussPts()(3, gg) * det_H;
811 
812  auto t_row_base = row_data.getFTensor0N(gg, 0);
813  const double drho_coef = (boneN / rho);
814 
815  int rr = 0;
816  for (; rr != row_nb_dofs / 3; ++rr) {
817 
818  auto t_col_n = col_data.getFTensor0N(gg, 0);
819  auto t_col_diff_base = col_data.getFTensor1DiffN<3>(gg, 0);
820 
822  &nA(3 * rr + 0, 0), &nA(3 * rr + 0, 1), &nA(3 * rr + 0, 2),
823  &nA(3 * rr + 1, 0), &nA(3 * rr + 1, 1), &nA(3 * rr + 1, 2),
824  &nA(3 * rr + 2, 0), &nA(3 * rr + 2, 1), &nA(3 * rr + 2, 2), 3);
826 
827  t_a(i) =
828  t_row_base * t_cauchy_stress(i, j) * t_diff_rho(j) * val * drho_coef;
829 
830  for (int cc = 0; cc != col_nb_dofs / 3; cc++) {
831 
832  t_mat(i, j) += t_a(i) * (t_invH(l, j) * t_col_diff_base(l));
833 
834  ++t_mat;
835  ++t_col_diff_base;
836  ++t_col_n;
837  }
838  ++t_row_base;
839  ++t_row_diff_n;
840  }
841 
842  for (; rr != nb_row_base; ++rr) {
843  ++t_row_base;
844  ++t_row_diff_n;
845  }
846 
847  ++t_h;
848  ++t_H;
849  ++t_invH;
850  ++rho;
851  ++t_diff_rho;
852  ++t_cauchy_stress;
853  ++det_H;
854  ++t_initial_singular_displacement;
855  }
856 
857  int *indices_ptr = &row_data.getIndices()[0];
858  if (!forcesOnlyOnEntitiesRow.empty()) {
859  iNdices.resize(row_nb_dofs);
860  noalias(iNdices) = row_data.getIndices();
861  indices_ptr = &iNdices[0];
862  auto &dofs = row_data.getFieldDofs();
863  auto dit = dofs.begin();
864  for (int ii = 0; dit != dofs.end(); dit++, ii++) {
865  if(auto dof = (*dit)) {
866  if (forcesOnlyOnEntitiesRow.find(dof->getEnt()) ==
867  forcesOnlyOnEntitiesRow.end()) {
868  iNdices[ii] = -1;
869  }
870  }
871  }
872  }
873 
874  CHKERR MatSetValues(getFEMethod()->snes_B, row_nb_dofs, indices_ptr,
875  col_nb_dofs, &*col_data.getIndices().begin(),
876  &*nA.data().begin(), ADD_VALUES);
877 
879 }

Member Data Documentation

◆ boneN

const double FractureMechanics::OpLhsBoneExplicitDerivariveWithHooke_dx::boneN

Definition at line 647 of file CrackFrontElement.hpp.

◆ commonData

HookeElement::DataAtIntegrationPts& FractureMechanics::OpLhsBoneExplicitDerivariveWithHooke_dx::commonData

Definition at line 640 of file CrackFrontElement.hpp.

◆ diffDiffRhoAtGaussPts

boost::shared_ptr<MatrixDouble> FractureMechanics::OpLhsBoneExplicitDerivariveWithHooke_dx::diffDiffRhoAtGaussPts

Definition at line 643 of file CrackFrontElement.hpp.

◆ diffRhoAtGaussPts

boost::shared_ptr<MatrixDouble> FractureMechanics::OpLhsBoneExplicitDerivariveWithHooke_dx::diffRhoAtGaussPts

Definition at line 642 of file CrackFrontElement.hpp.

◆ forcesOnlyOnEntitiesRow

Range FractureMechanics::OpLhsBoneExplicitDerivariveWithHooke_dx::forcesOnlyOnEntitiesRow

Definition at line 648 of file CrackFrontElement.hpp.

◆ iNdices

ublas::vector<int> FractureMechanics::OpLhsBoneExplicitDerivariveWithHooke_dx::iNdices

Definition at line 649 of file CrackFrontElement.hpp.

◆ nA

MatrixDouble FractureMechanics::OpLhsBoneExplicitDerivariveWithHooke_dx::nA

Definition at line 650 of file CrackFrontElement.hpp.

◆ rHo0

const double FractureMechanics::OpLhsBoneExplicitDerivariveWithHooke_dx::rHo0

Definition at line 646 of file CrackFrontElement.hpp.

◆ rhoAtGaussPts

boost::shared_ptr<VectorDouble> FractureMechanics::OpLhsBoneExplicitDerivariveWithHooke_dx::rhoAtGaussPts

Definition at line 641 of file CrackFrontElement.hpp.

◆ singularDispl

MatrixDouble& FractureMechanics::OpLhsBoneExplicitDerivariveWithHooke_dx::singularDispl

Definition at line 644 of file CrackFrontElement.hpp.

◆ tetsInBlock

Range FractureMechanics::OpLhsBoneExplicitDerivariveWithHooke_dx::tetsInBlock

Definition at line 645 of file CrackFrontElement.hpp.


The documentation for this struct was generated from the following files:
MoFEMFunctionReturnHot
#define MoFEMFunctionReturnHot(a)
Last executable line of each PETSc function used for error handling. Replaces return()
Definition: definitions.h:460
MoFEM::MatSetValues
MoFEMErrorCode MatSetValues(Mat M, const EntitiesFieldData::EntData &row_data, const EntitiesFieldData::EntData &col_data, const double *ptr, InsertMode iora)
Assemble PETSc matrix.
Definition: EntitiesFieldData.hpp:1644
FractureMechanics::OpLhsBoneExplicitDerivariveWithHooke_dx::singularDispl
MatrixDouble & singularDispl
Definition: CrackFrontElement.hpp:644
FTensor::Tensor1< double, 3 >
rho
double rho
Definition: plastic.cpp:140
FractureMechanics::OpLhsBoneExplicitDerivariveWithHooke_dx::forcesOnlyOnEntitiesRow
Range forcesOnlyOnEntitiesRow
Definition: CrackFrontElement.hpp:648
FractureMechanics::OpLhsBoneExplicitDerivariveWithHooke_dx::nA
MatrixDouble nA
Definition: CrackFrontElement.hpp:650
MoFEM::VolumeElementForcesAndSourcesCore::UserDataOperator::getVolume
double getVolume() const
element volume (linear geometry)
Definition: VolumeElementForcesAndSourcesCore.hpp:161
FractureMechanics::OpLhsBoneExplicitDerivariveWithHooke_dx::rhoAtGaussPts
boost::shared_ptr< VectorDouble > rhoAtGaussPts
Definition: CrackFrontElement.hpp:641
FractureMechanics::OpLhsBoneExplicitDerivariveWithHooke_dx::diffRhoAtGaussPts
boost::shared_ptr< MatrixDouble > diffRhoAtGaussPts
Definition: CrackFrontElement.hpp:642
MoFEM::ForcesAndSourcesCore::UserDataOperator::OPROWCOL
@ OPROWCOL
operator doWork is executed on FE rows &columns
Definition: ForcesAndSourcesCore.hpp:569
FTensor::Tensor2< double *, 3, 3 >
FractureMechanics::OpLhsBoneExplicitDerivariveWithHooke_dx::commonData
HookeElement::DataAtIntegrationPts & commonData
Definition: CrackFrontElement.hpp:640
MoFEM::ForcesAndSourcesCore::UserDataOperator::getGaussPts
MatrixDouble & getGaussPts()
matrix of integration (Gauss) points for Volume Element
Definition: ForcesAndSourcesCore.hpp:1236
FractureMechanics::OpLhsBoneExplicitDerivariveWithHooke_dx::rHo0
const double rHo0
Definition: CrackFrontElement.hpp:646
CHKERR
#define CHKERR
Inline error check.
Definition: definitions.h:548
FractureMechanics::OpLhsBoneExplicitDerivariveWithHooke_dx::tetsInBlock
Range tetsInBlock
Definition: CrackFrontElement.hpp:645
MoFEM::getFTensor0FromVec
static auto getFTensor0FromVec(ublas::vector< T, A > &data)
Get tensor rank 0 (scalar) form data vector.
Definition: Templates.hpp:135
MoFEM::VolumeElementForcesAndSourcesCore::UserDataOperator
friend class UserDataOperator
Definition: VolumeElementForcesAndSourcesCore.hpp:105
i
FTensor::Index< 'i', SPACE_DIM > i
Definition: hcurl_divergence_operator_2d.cpp:27
FTensor::Index< 'i', 3 >
MoFEM::ForcesAndSourcesCore::UserDataOperator::getFEMethod
const FEMethod * getFEMethod() const
Return raw pointer to Finite Element Method object.
Definition: ForcesAndSourcesCore.hpp:1042
FractureMechanics::OpLhsBoneExplicitDerivariveWithHooke_dx::boneN
const double boneN
Definition: CrackFrontElement.hpp:647
MoFEM::ForcesAndSourcesCore::UserDataOperator::getFEEntityHandle
EntityHandle getFEEntityHandle() const
Return finite element entity handle.
Definition: ForcesAndSourcesCore.hpp:1004
j
FTensor::Index< 'j', 3 > j
Definition: matrix_function.cpp:19
m
FTensor::Index< 'm', 3 > m
Definition: shallow_wave.cpp:80
FractureMechanics::OpLhsBoneExplicitDerivariveWithHooke_dx::iNdices
ublas::vector< int > iNdices
Definition: CrackFrontElement.hpp:649
FractureMechanics::OpLhsBoneExplicitDerivariveWithHooke_dx::diffDiffRhoAtGaussPts
boost::shared_ptr< MatrixDouble > diffDiffRhoAtGaussPts
Definition: CrackFrontElement.hpp:643
k
FTensor::Index< 'k', 3 > k
Definition: matrix_function.cpp:20
MoFEMFunctionReturn
#define MoFEMFunctionReturn(a)
Last executable line of each PETSc function used for error handling. Replaces return()
Definition: definitions.h:429
MoFEMFunctionBegin
#define MoFEMFunctionBegin
First executable line of each MoFEM function, used for error handling. Final line of MoFEM functions ...
Definition: definitions.h:359
l
FTensor::Index< 'l', 3 > l
Definition: matrix_function.cpp:21