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hdiv_divergence_operator.cpp
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1/**
2 * \file hdiv_divergence_operator.cpp
3 * \example mofem/atom_tests/hdiv_divergence_operator.cpp
4 *
5 * Using PipelineManager interface calculate the divergence of base functions,
6 * and integral of flux on the boundary. Since the h-div space is used, volume
7 * integral and boundary integral should give the same result.
8 */
9
10
11
12#include <MoFEM.hpp>
13
14using namespace MoFEM;
15
16static char help[] = "...\n\n";
17
20
21 double &dIv;
26
27 MoFEMErrorCode doWork(int side, EntityType type,
29};
30
33
34 double &dIv;
35 OpFacesFluxes(double &div)
37 "HDIV", UserDataOperator::OPROW),
38 dIv(div) {}
39
40 MoFEMErrorCode doWork(int side, EntityType type,
42};
43
44int main(int argc, char *argv[]) {
45
46 MoFEM::Core::Initialize(&argc, &argv, (char *)0, help);
47
48 try {
49
50 enum bases { AINSWORTH, DEMKOWICZ, LASTOP };
51
52 const char *list[] = {"ainsworth", "demkowicz"};
53
54 PetscBool flg;
55 PetscInt choice_value = AINSWORTH;
56 CHKERR PetscOptionsGetEList(PETSC_NULLPTR, NULL, "-base", list, LASTOP,
57 &choice_value, &flg);
58 if (flg != PETSC_TRUE) {
59 SETERRQ(PETSC_COMM_SELF, MOFEM_IMPOSSIBLE_CASE, "base not set");
60 }
61
62 PetscBool ho_geometry = PETSC_FALSE;
63 CHKERR PetscOptionsGetBool(PETSC_NULLPTR, "", "-ho_geometry", &ho_geometry,
64 PETSC_NULLPTR);
65
66 PetscInt ho_choice_value = AINSWORTH;
67 CHKERR PetscOptionsGetEList(PETSC_NULLPTR, NULL, "-ho_base", list, LASTOP,
68 &ho_choice_value, &flg);
69
70 DMType dm_name = "DMMOFEM";
71 CHKERR DMRegister_MoFEM(dm_name);
72
73 // Create MoAB
74 moab::Core mb_instance; ///< database
75 moab::Interface &moab = mb_instance; ///< interface
76
77 // Create MoFEM
78 MoFEM::Core core(moab);
79 MoFEM::Interface &m_field = core;
80
81 Simple *simple_interface = m_field.getInterface<Simple>();
82 PipelineManager *pipeline_mng = m_field.getInterface<PipelineManager>();
83 CHKERR simple_interface->getOptions();
84 CHKERR simple_interface->loadFile("");
85
86 // fields
87 switch (choice_value) {
88 case AINSWORTH:
89 CHKERR simple_interface->addDomainField("HDIV", HDIV,
91 CHKERR simple_interface->addBoundaryField("HDIV", HDIV,
93 break;
94 case DEMKOWICZ:
95 CHKERR simple_interface->addDomainField("HDIV", HDIV,
97 CHKERR simple_interface->addBoundaryField("HDIV", HDIV,
99 break;
100 }
101
102 if (ho_geometry == PETSC_TRUE) {
103 switch (ho_choice_value) {
104 case AINSWORTH:
105 CHKERR simple_interface->addDataField("MESH_NODE_POSITIONS", H1,
107 case DEMKOWICZ:
108 CHKERR simple_interface->addDataField("MESH_NODE_POSITIONS", H1,
110 }
111 }
112
113 constexpr int order = 3;
114 CHKERR simple_interface->setFieldOrder("HDIV", order);
115 if (ho_geometry == PETSC_TRUE)
116 CHKERR simple_interface->setFieldOrder("MESH_NODE_POSITIONS", 2);
117 CHKERR simple_interface->setUp();
118
119 /// This has no real effect, folling line are only for atom test purpose
120 pipeline_mng->getDomainLhsFE().reset();
121 pipeline_mng->getDomainRhsFE().reset();
122 pipeline_mng->getBoundaryLhsFE().reset();
123 pipeline_mng->getBoundaryRhsFE().reset();
124 pipeline_mng->getSkeletonLhsFE().reset();
125 pipeline_mng->getSkeletonRhsFE().reset();
126
127 auto integration_rule = [](int, int, int p_data) { return 2 * p_data; };
128 CHKERR pipeline_mng->setDomainRhsIntegrationRule(integration_rule);
129 CHKERR pipeline_mng->setBoundaryRhsIntegrationRule(integration_rule);
130
131 double divergence_vol = 0;
132 double divergence_skin = 0;
133
134 if (m_field.check_field("MESH_NODE_POSITIONS")) {
135 CHKERR AddHOOps<3, 3, 3>::add(pipeline_mng->getOpDomainRhsPipeline(),
136 {HDIV}, "MESH_NODE_POSITIONS");
137 CHKERR AddHOOps<2, 3, 3>::add(pipeline_mng->getOpBoundaryRhsPipeline(),
138 {HDIV}, "MESH_NODE_POSITIONS");
139 } else {
140 CHKERR AddHOOps<3, 3, 3>::add(pipeline_mng->getOpDomainRhsPipeline(),
141 {HDIV});
142 CHKERR AddHOOps<2, 3, 3>::add(pipeline_mng->getOpBoundaryRhsPipeline(),
143 {HDIV});
144 }
145
146 // domain
147 pipeline_mng->getOpDomainRhsPipeline().push_back(
148 new OpVolDivergence(divergence_vol));
149 // boundary
150 pipeline_mng->getOpBoundaryRhsPipeline().push_back(
151 new OpFacesFluxes(divergence_skin));
152
153 // project geometry form 10 node tets on higher order approx. functions
154 if (ho_geometry == PETSC_TRUE) {
155 Projection10NodeCoordsOnField ent_method(m_field, "MESH_NODE_POSITIONS");
156 CHKERR m_field.loop_dofs("MESH_NODE_POSITIONS", ent_method);
157 }
158 CHKERR pipeline_mng->loopFiniteElements();
159
160 MOFEM_LOG("WORLD", Sev::inform)
161 << "divergence_vol " << std::setprecision(12) << divergence_vol;
162 MOFEM_LOG("WORLD", Sev::inform)
163 << "divergence_skin " << std::setprecision(12) << divergence_skin;
164
165 constexpr double eps = 1e-8;
166 const double error = divergence_skin - divergence_vol;
167 if (fabs(error) > eps)
168 SETERRQ(PETSC_COMM_SELF, MOFEM_ATOM_TEST_INVALID,
169 "invalid surface flux or divergence or both error = %3.4e",
170 error);
171 }
173
175}
176
178OpVolDivergence::doWork(int side, EntityType type,
181
182 if (CN::Dimension(type) < 2)
184
185 if (data.getFieldData().size() == 0)
187
188 int nb_gauss_pts = data.getDiffN().size1();
189 int nb_dofs = data.getFieldData().size();
190
191 VectorDouble div_vec;
192 div_vec.resize(nb_dofs, 0);
193
194 FTensor::Index<'i', 3> i;
195 auto t_base_diff_hdiv = data.getFTensor2DiffN<3, 3>();
196
197 for (size_t gg = 0; gg < nb_gauss_pts; gg++) {
198 for (size_t dd = 0; dd != div_vec.size(); dd++) {
199 double w = getGaussPts()(3, gg) * getVolume();
200 dIv += t_base_diff_hdiv(i, i) * w;
201 ++t_base_diff_hdiv;
202 }
203 }
204
206}
207
208MoFEMErrorCode OpFacesFluxes::doWork(int side, EntityType type,
211
212 if (CN::Dimension(type) != 2)
214
215 int nb_gauss_pts = data.getN().size1();
216 int nb_dofs = data.getFieldData().size();
217
218 for (int gg = 0; gg < nb_gauss_pts; gg++) {
219 for (int dd = 0; dd < nb_dofs; dd++) {
220
221 double w = getGaussPts()(2, gg);
222 const double n0 = getNormalsAtGaussPts(gg)[0];
223 const double n1 = getNormalsAtGaussPts(gg)[1];
224 const double n2 = getNormalsAtGaussPts(gg)[2];
225 if (getFEType() == MBTRI) {
226 w *= 0.5;
227 }
228
229 dIv += (n0 * data.getVectorN<3>(gg)(dd, 0) +
230 n1 * data.getVectorN<3>(gg)(dd, 1) +
231 n2 * data.getVectorN<3>(gg)(dd, 2)) *
232 w;
233 }
234 }
235
237}
ForcesAndSourcesCore::UserDataOperator UserDataOperator
int main()
static const double eps
#define CATCH_ERRORS
Catch errors.
@ AINSWORTH_LEGENDRE_BASE
Ainsworth Cole (Legendre) approx. base .
Definition definitions.h:60
@ DEMKOWICZ_JACOBI_BASE
Definition definitions.h:66
#define MoFEMFunctionReturnHot(a)
Last executable line of each PETSc function used for error handling. Replaces return()
@ H1
continuous field
Definition definitions.h:85
@ HDIV
field with continuous normal traction
Definition definitions.h:87
#define MoFEMFunctionBegin
First executable line of each MoFEM function, used for error handling. Final line of MoFEM functions ...
@ MOFEM_IMPOSSIBLE_CASE
Definition definitions.h:35
@ MOFEM_ATOM_TEST_INVALID
Definition definitions.h:40
#define MoFEMFunctionReturn(a)
Last executable line of each PETSc function used for error handling. Replaces return()
#define CHKERR
Inline error check.
#define MoFEMFunctionBeginHot
First executable line of each MoFEM function, used for error handling. Final line of MoFEM functions ...
constexpr int order
auto integration_rule
PetscErrorCode DMRegister_MoFEM(const char sname[])
Register MoFEM problem.
Definition DMMoFEM.cpp:43
virtual bool check_field(const std::string &name) const =0
check if field is in database
#define MOFEM_LOG(channel, severity)
Log.
virtual MoFEMErrorCode loop_dofs(const Problem *problem_ptr, const std::string &field_name, RowColData rc, DofMethod &method, int lower_rank, int upper_rank, int verb=DEFAULT_VERBOSITY)=0
Make a loop over dofs.
FTensor::Index< 'i', SPACE_DIM > i
static char help[]
PetscErrorCode MoFEMErrorCode
MoFEM/PETSc error code.
implementation of Data Operators for Forces and Sources
Definition Common.hpp:10
PetscErrorCode PetscOptionsGetBool(PetscOptions *, const char pre[], const char name[], PetscBool *bval, PetscBool *set)
PetscErrorCode PetscOptionsGetEList(PetscOptions *, const char pre[], const char name[], const char *const *list, PetscInt next, PetscInt *value, PetscBool *set)
Add operators pushing bases from local to physical configuration.
Core (interface) class.
Definition Core.hpp:82
static MoFEMErrorCode Initialize(int *argc, char ***args, const char file[], const char help[])
Initializes the MoFEM database PETSc, MOAB and MPI.
Definition Core.cpp:72
static MoFEMErrorCode Finalize()
Checks for options to be called at the conclusion of the program.
Definition Core.cpp:118
Deprecated interface functions.
Data on single entity (This is passed as argument to DataOperator::doWork)
FTensor::Tensor2< FTensor::PackPtr< double *, Tensor_Dim0 *Tensor_Dim1 >, Tensor_Dim0, Tensor_Dim1 > getFTensor2DiffN(FieldApproximationBase base)
Get derivatives of base functions for Hdiv space.
MatrixDouble & getDiffN(const FieldApproximationBase base)
get derivatives of base functions
MatrixDouble & getN(const FieldApproximationBase base)
get base functions this return matrix (nb. of rows is equal to nb. of Gauss pts, nb....
const VectorDouble & getFieldData() const
Get DOF values on entity.
const MatrixAdaptor getVectorN(const FieldApproximationBase base, const int gg)
get Hdiv of base functions at Gauss pts
PipelineManager interface.
Projection of edge entities with one mid-node on hierarchical basis.
Simple interface for fast problem set-up.
Definition Simple.hpp:27
MoFEMErrorCode addDomainField(const std::string name, const FieldSpace space, const FieldApproximationBase base, const FieldCoefficientsNumber nb_of_coefficients, const TagType tag_type=MB_TAG_SPARSE, const enum MoFEMTypes bh=MF_ZERO, int verb=-1)
Add field on domain.
Definition Simple.cpp:261
MoFEMErrorCode loadFile(const std::string options, const std::string mesh_file_name, LoadFileFunc loadFunc=defaultLoadFileFunc)
Load mesh file.
Definition Simple.cpp:191
MoFEMErrorCode addBoundaryField(const std::string name, const FieldSpace space, const FieldApproximationBase base, const FieldCoefficientsNumber nb_of_coefficients, const TagType tag_type=MB_TAG_SPARSE, const enum MoFEMTypes bh=MF_ZERO, int verb=-1)
Add field on boundary.
Definition Simple.cpp:355
MoFEMErrorCode getOptions()
get options
Definition Simple.cpp:180
MoFEMErrorCode setFieldOrder(const std::string field_name, const int order, const Range *ents=NULL)
Set field order.
Definition Simple.cpp:575
MoFEMErrorCode addDataField(const std::string name, const FieldSpace space, const FieldApproximationBase base, const FieldCoefficientsNumber nb_of_coefficients, const TagType tag_type=MB_TAG_SPARSE, const enum MoFEMTypes bh=MF_ZERO, int verb=-1)
Add data field.
Definition Simple.cpp:393
MoFEMErrorCode setUp(const PetscBool is_partitioned=PETSC_TRUE)
Setup problem.
Definition Simple.cpp:736
MoFEMErrorCode getInterface(IFACE *&iface) const
Get interface reference to pointer of interface.
MoFEMErrorCode doWork(int side, EntityType type, EntitiesFieldData::EntData &data)
MoFEMErrorCode doWork(int side, EntityType type, EntitiesFieldData::EntData &data)