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MoFEM::OpPostProcMapInMoab< DIM1, DIM2, O > Struct Template Reference

Post post-proc data at points from hash maps. More...

#include "src/post_proc/PostProcBrokenMeshInMoabBase.hpp"

Inheritance diagram for MoFEM::OpPostProcMapInMoab< DIM1, DIM2, O >:
[legend]
Collaboration diagram for MoFEM::OpPostProcMapInMoab< DIM1, DIM2, O >:
[legend]

Public Types

using DataMapVec = std::map<std::string, boost::shared_ptr<VectorDouble>>
 
using DataMapMat = std::map<std::string, boost::shared_ptr<MatrixDouble>>
 
- Public Types inherited from MoFEM::ForcesAndSourcesCore::UserDataOperator
enum  OpType {
  OPROW = 1 << 0 , OPCOL = 1 << 1 , OPROWCOL = 1 << 2 , OPSPACE = 1 << 3 ,
  OPLAST = 1 << 3
}
 Controls loop over entities on element. More...
 
using AdjCache
 
- Public Types inherited from MoFEM::DataOperator
using DoWorkLhsHookFunType
 
using DoWorkRhsHookFunType
 

Public Member Functions

 OpPostProcMapInMoab (moab::Interface &post_proc_mesh, std::vector< EntityHandle > &map_gauss_pts, DataMapVec data_map_scalar, DataMapMat data_map_vec, DataMapMat data_map_mat, DataMapMat data_symm_map_mat)
 Construct a new OpPostProcMapInMoab object.
 
MoFEMErrorCode doWork (int side, EntityType type, EntitiesFieldData::EntData &data)
 Operator for linear form, usually to calculate values on right hand side.
 
- Public Member Functions inherited from MoFEM::ForcesAndSourcesCore::UserDataOperator
 UserDataOperator (const FieldSpace space, const char type=OPSPACE, const bool symm=true)
 
 UserDataOperator (const std::string field_name, const char type, const bool symm=true)
 
 UserDataOperator (const std::string row_field_name, const std::string col_field_name, const char type, const bool symm=true)
 
boost::shared_ptr< const NumeredEntFiniteElementgetNumeredEntFiniteElementPtr () const
 Return raw pointer to NumeredEntFiniteElement.
 
EntityHandle getFEEntityHandle () const
 Return finite element entity handle.
 
int getFEDim () const
 Get dimension of finite element.
 
EntityType getFEType () const
 Get dimension of finite element.
 
boost::weak_ptr< SideNumbergetSideNumberPtr (const int side_number, const EntityType type)
 Get the side number pointer.
 
EntityHandle getSideEntity (const int side_number, const EntityType type)
 Get the side entity.
 
int getNumberOfNodesOnElement () const
 Get the number of nodes on finite element.
 
MoFEMErrorCode getProblemRowIndices (const std::string filed_name, const EntityType type, const int side, VectorInt &indices) const
 Get row indices.
 
MoFEMErrorCode getProblemColIndices (const std::string filed_name, const EntityType type, const int side, VectorInt &indices) const
 Get col indices.
 
const FEMethodgetFEMethod () const
 Return raw pointer to Finite Element Method object.
 
int getOpType () const
 Get operator types.
 
void setOpType (const OpType type)
 Set operator type.
 
void addOpType (const OpType type)
 Add operator type.
 
int getNinTheLoop () const
 get number of finite element in the loop
 
int getLoopSize () const
 get size of elements in the loop
 
std::string getFEName () const
 Get name of the element.
 
ForcesAndSourcesCoregetPtrFE () const
 
ForcesAndSourcesCoregetSidePtrFE () const
 
ForcesAndSourcesCoregetRefinePtrFE () const
 
const PetscData::SwitchesgetDataCtx () const
 
const KspMethod::KSPContext getKSPCtx () const
 
const SnesMethod::SNESContext getSNESCtx () const
 
const TSMethod::TSContext getTSCtx () const
 
Vec getKSPf () const
 
Mat getKSPA () const
 
Mat getKSPB () const
 
Vec getSNESf () const
 
Vec getSNESx () const
 
Mat getSNESA () const
 
Mat getSNESB () const
 
Vec getTSu () const
 
Vec getTSu_t () const
 
Vec getTSu_tt () const
 
Vec getTSf () const
 
Mat getTSA () const
 
Mat getTSB () const
 
int getTSstep () const
 
double getTStime () const
 
double getTStimeStep () const
 
double getTSa () const
 
double getTSaa () const
 
MatrixDoublegetGaussPts ()
 matrix of integration (Gauss) points for Volume Element
 
auto getFTensor0IntegrationWeight ()
 Get integration weights.
 
MatrixDoublegetCoordsAtGaussPts ()
 Gauss points and weight, matrix (nb. of points x 3)
 
auto getFTensor1CoordsAtGaussPts ()
 Get coordinates at integration points assuming linear geometry.
 
double getMeasure () const
 get measure of element
 
doublegetMeasure ()
 get measure of element
 
MoFEMErrorCode loopSide (const string &fe_name, ForcesAndSourcesCore *side_fe, const size_t dim, const EntityHandle ent_for_side=0, boost::shared_ptr< Range > fe_range=nullptr, const int verb=QUIET, const LogManager::SeverityLevel sev=Sev::noisy, AdjCache *adj_cache=nullptr)
 User calls this function to loop over elements on the side of face. This function calls finite element with its operator to do calculations.
 
MoFEMErrorCode loopThis (const string &fe_name, ForcesAndSourcesCore *this_fe, const int verb=QUIET, const LogManager::SeverityLevel sev=Sev::noisy)
 User calls this function to loop over the same element using a different set of integration points. This function calls finite element with its operator to do calculations.
 
MoFEMErrorCode loopParent (const string &fe_name, ForcesAndSourcesCore *parent_fe, const int verb=QUIET, const LogManager::SeverityLevel sev=Sev::noisy)
 User calls this function to loop over parent elements. This function calls finite element with its operator to do calculations.
 
MoFEMErrorCode loopChildren (const string &fe_name, ForcesAndSourcesCore *child_fe, const int verb=QUIET, const LogManager::SeverityLevel sev=Sev::noisy)
 User calls this function to loop over parent elements. This function calls finite element with its operator to do calculations.
 
MoFEMErrorCode loopRange (const string &fe_name, ForcesAndSourcesCore *range_fe, boost::shared_ptr< Range > fe_range, const int verb=QUIET, const LogManager::SeverityLevel sev=Sev::noisy)
 Iterate over range of elements.
 
- Public Member Functions inherited from MoFEM::DataOperator
 DataOperator (const bool symm=true)
 
virtual ~DataOperator ()=default
 
virtual MoFEMErrorCode doWork (int row_side, int col_side, EntityType row_type, EntityType col_type, EntitiesFieldData::EntData &row_data, EntitiesFieldData::EntData &col_data)
 Operator for bi-linear form, usually to calculate values on left hand side.
 
virtual MoFEMErrorCode opLhs (EntitiesFieldData &row_data, EntitiesFieldData &col_data)
 
virtual MoFEMErrorCode opRhs (EntitiesFieldData &data, const bool error_if_no_base=false)
 
bool getSymm () const
 Get if operator uses symmetry of DOFs or not.
 
void setSymm ()
 set if operator is executed taking in account symmetry
 
void unSetSymm ()
 unset if operator is executed for non symmetric problem
 

Private Attributes

moab::Interface & postProcMesh
 
std::vector< EntityHandle > & mapGaussPts
 
DataMapVec dataMapScalar
 
DataMapMat dataMapVec
 
DataMapMat dataMapMat
 
DataMapMat dataMapSymmMat
 

Additional Inherited Members

- Public Attributes inherited from MoFEM::ForcesAndSourcesCore::UserDataOperator
char opType
 
std::string rowFieldName
 
std::string colFieldName
 
FieldSpace sPace
 
- Public Attributes inherited from MoFEM::DataOperator
DoWorkLhsHookFunType doWorkLhsHook
 
DoWorkRhsHookFunType doWorkRhsHook
 
bool sYmm
 If true assume that matrix is symmetric structure.
 
std::array< bool, MBMAXTYPE > doEntities
 If true operator is executed for entity.
 
booldoVertices
 \deprectaed If false skip vertices
 
booldoEdges
 \deprectaed If false skip edges
 
booldoQuads
 \deprectaed
 
booldoTris
 \deprectaed
 
booldoTets
 \deprectaed
 
booldoPrisms
 \deprectaed
 
- Static Public Attributes inherited from MoFEM::ForcesAndSourcesCore::UserDataOperator
static const char *const OpTypeNames []
 
- Protected Member Functions inherited from MoFEM::ForcesAndSourcesCore::UserDataOperator
virtual MoFEMErrorCode setPtrFE (ForcesAndSourcesCore *ptr)
 
- Protected Attributes inherited from MoFEM::ForcesAndSourcesCore::UserDataOperator
ForcesAndSourcesCoreptrFE
 

Detailed Description

Member Typedef Documentation

◆ DataMapMat

template<int DIM1, int DIM2, typename O = ForcesAndSourcesCore::UserDataOperator>
using MoFEM::OpPostProcMapInMoab< DIM1, DIM2, O >::DataMapMat = std::map<std::string, boost::shared_ptr<MatrixDouble>>

Definition at line 712 of file PostProcBrokenMeshInMoabBase.hpp.

◆ DataMapVec

template<int DIM1, int DIM2, typename O = ForcesAndSourcesCore::UserDataOperator>
using MoFEM::OpPostProcMapInMoab< DIM1, DIM2, O >::DataMapVec = std::map<std::string, boost::shared_ptr<VectorDouble>>

Definition at line 711 of file PostProcBrokenMeshInMoabBase.hpp.

Constructor & Destructor Documentation

◆ OpPostProcMapInMoab()

template<int DIM1, int DIM2, typename O = ForcesAndSourcesCore::UserDataOperator>
MoFEM::OpPostProcMapInMoab< DIM1, DIM2, O >::OpPostProcMapInMoab ( moab::Interface & post_proc_mesh,
std::vector< EntityHandle > & map_gauss_pts,
DataMapVec data_map_scalar,
DataMapMat data_map_vec,
DataMapMat data_map_mat,
DataMapMat data_symm_map_mat )
inline

Construct a new OpPostProcMapInMoab object.

Parameters
post_proc_meshpostprocessing mesh
map_gauss_ptsmap of gauss points to nodes of postprocessing mesh
data_map_scalarhash map of scalar values (string is name of the tag)
data_map_vechash map of vector values
data_map_mathash map of second order tensor values
data_symm_map_mathash map of symmetric second order tensor values

Definition at line 725 of file PostProcBrokenMeshInMoabBase.hpp.

729 : O(NOSPACE, O::OPSPACE), postProcMesh(post_proc_mesh),
730 mapGaussPts(map_gauss_pts), dataMapScalar(data_map_scalar),
731 dataMapVec(data_map_vec), dataMapMat(data_map_mat),
732 dataMapSymmMat(data_symm_map_mat) {
733 // Operator is only executed for vertices
734 std::fill(&O::doEntities[MBEDGE], &O::doEntities[MBMAXTYPE], false);
735 }
@ NOSPACE
Definition definitions.h:83
std::vector< EntityHandle > & mapGaussPts

Member Function Documentation

◆ doWork()

template<int DIM1, int DIM2, typename O >
MoFEMErrorCode MoFEM::OpPostProcMapInMoab< DIM1, DIM2, O >::doWork ( int side,
EntityType type,
EntitiesFieldData::EntData & data )
virtual

Operator for linear form, usually to calculate values on right hand side.

Reimplemented from MoFEM::DataOperator.

Definition at line 750 of file PostProcBrokenMeshInMoabBase.hpp.

751 {
753
754 std::array<double, 9> def;
755 std::fill(def.begin(), def.end(), 0);
756
757 auto get_tag = [&](const std::string name, size_t size) {
758 Tag th;
759 CHKERR postProcMesh.tag_get_handle(name.c_str(), size, MB_TYPE_DOUBLE, th,
760 MB_TAG_CREAT | MB_TAG_SPARSE,
761 def.data());
762 return th;
763 };
764
765 MatrixDouble3by3 mat(3, 3);
766
767 auto set_vector_3d = [&](auto &t) -> MatrixDouble3by3 & {
768 mat.clear();
769 for (size_t r = 0; r != DIM1; ++r)
770 mat(0, r) = t(r);
771 return mat;
772 };
773
774 auto set_matrix_3d = [&](auto &t) -> MatrixDouble3by3 & {
775 mat.clear();
776 for (size_t r = 0; r != DIM1; ++r)
777 for (size_t c = 0; c != DIM2; ++c)
778 mat(r, c) = t(r, c);
779 return mat;
780 };
781
782 auto set_matrix_symm_3d = [&](auto &t) -> MatrixDouble3by3 & {
783 mat.clear();
784 for (size_t r = 0; r != DIM1; ++r)
785 for (size_t c = 0; c != DIM1; ++c)
786 mat(r, c) = t(r, c);
787 return mat;
788 };
789
790 auto set_scalar = [&](auto t) -> MatrixDouble3by3 & {
791 mat.clear();
792 mat(0, 0) = t;
793 return mat;
794 };
795
796 auto set_float_precision = [](const double x) {
797 if (std::abs(x) < std::numeric_limits<float>::epsilon())
798 return 0.;
799 else
800 return x;
801 };
802
803 auto set_tag = [&](auto th, auto gg, MatrixDouble3by3 &mat) {
804 for (auto &v : mat.data())
805 v = set_float_precision(v);
806 return postProcMesh.tag_set_data(th, &mapGaussPts[gg], 1,
807 &*mat.data().begin());
808 };
809
810 for (auto &m : dataMapScalar) {
811 if (m.second) {
812 auto th = get_tag(m.first, 1);
813 auto t_scl = getFTensor0FromVec(*m.second);
814 auto nb_integration_pts = O::getGaussPts().size2();
815 for (int gg = 0; gg != nb_integration_pts; ++gg) {
816 CHKERR set_tag(th, gg, set_scalar(t_scl));
817 ++t_scl;
818 }
819 }
820 }
821
822 for (auto &m : dataMapVec) {
823 if (m.second) {
824 auto th = get_tag(m.first, 3);
825 auto t_vec = getFTensor1FromMat<DIM1>(*m.second);
826 auto nb_integration_pts = O::getGaussPts().size2();
827 for (int gg = 0; gg != nb_integration_pts; ++gg) {
828 CHKERR set_tag(th, gg, set_vector_3d(t_vec));
829 ++t_vec;
830 }
831 }
832 }
833
834 for (auto &m : dataMapMat) {
835 if (m.second) {
836 auto th = get_tag(m.first, 9);
837 auto t_mat = getFTensor2FromMat<DIM1, DIM2>(*m.second);
838 auto nb_integration_pts = O::getGaussPts().size2();
839 for (int gg = 0; gg != nb_integration_pts; ++gg) {
840 CHKERR set_tag(th, gg, set_matrix_3d(t_mat));
841 ++t_mat;
842 }
843 }
844 }
845
846 for (auto &m : dataMapSymmMat) {
847 if (m.second) {
848 auto th = get_tag(m.first, 9);
849 auto t_mat = getFTensor2SymmetricFromMat<DIM1>(*m.second);
850 auto nb_integration_pts = O::getGaussPts().size2();
851 for (int gg = 0; gg != nb_integration_pts; ++gg) {
852 CHKERR set_tag(th, gg, set_matrix_symm_3d(t_mat));
853 ++t_mat;
854 }
855 }
856 }
857
859}
#define MoFEMFunctionBegin
First executable line of each MoFEM function, used for error handling. Final line of MoFEM functions ...
#define MoFEMFunctionReturn(a)
Last executable line of each PETSc function used for error handling. Replaces return()
#define CHKERR
Inline error check.
const double c
speed of light (cm/ns)
const double v
phase velocity of light in medium (cm/ns)
constexpr int DIM2
Definition level_set.cpp:22
constexpr int DIM1
Definition level_set.cpp:21
MatrixBoundedArray< double, 9 > MatrixDouble3by3
Definition Types.hpp:105
FTensor::Tensor1< FTensor::PackPtr< T *, S >, Tensor_Dim > getFTensor1FromMat(ublas::matrix< T, L, A > &data)
Get tensor rank 1 (vector) form data matrix.
FTensor::Tensor2< FTensor::PackPtr< double *, 1 >, Tensor_Dim1, Tensor_Dim2 > getFTensor2FromMat(MatrixDouble &data)
Get tensor rank 2 (matrix) form data matrix.
static auto getFTensor2SymmetricFromMat(ublas::matrix< T, L, A > &data)
Get symmetric tensor rank 2 (matrix) form data matrix.
static auto getFTensor0FromVec(ublas::vector< T, A > &data)
Get tensor rank 0 (scalar) form data vector.
int r
Definition sdf.py:8
constexpr double t
plate stiffness
Definition plate.cpp:58
FTensor::Index< 'm', 3 > m

Member Data Documentation

◆ dataMapMat

template<int DIM1, int DIM2, typename O = ForcesAndSourcesCore::UserDataOperator>
DataMapMat MoFEM::OpPostProcMapInMoab< DIM1, DIM2, O >::dataMapMat
private

Definition at line 744 of file PostProcBrokenMeshInMoabBase.hpp.

◆ dataMapScalar

template<int DIM1, int DIM2, typename O = ForcesAndSourcesCore::UserDataOperator>
DataMapVec MoFEM::OpPostProcMapInMoab< DIM1, DIM2, O >::dataMapScalar
private

Definition at line 742 of file PostProcBrokenMeshInMoabBase.hpp.

◆ dataMapSymmMat

template<int DIM1, int DIM2, typename O = ForcesAndSourcesCore::UserDataOperator>
DataMapMat MoFEM::OpPostProcMapInMoab< DIM1, DIM2, O >::dataMapSymmMat
private

Definition at line 745 of file PostProcBrokenMeshInMoabBase.hpp.

◆ dataMapVec

template<int DIM1, int DIM2, typename O = ForcesAndSourcesCore::UserDataOperator>
DataMapMat MoFEM::OpPostProcMapInMoab< DIM1, DIM2, O >::dataMapVec
private

Definition at line 743 of file PostProcBrokenMeshInMoabBase.hpp.

◆ mapGaussPts

template<int DIM1, int DIM2, typename O = ForcesAndSourcesCore::UserDataOperator>
std::vector<EntityHandle>& MoFEM::OpPostProcMapInMoab< DIM1, DIM2, O >::mapGaussPts
private

Definition at line 741 of file PostProcBrokenMeshInMoabBase.hpp.

◆ postProcMesh

template<int DIM1, int DIM2, typename O = ForcesAndSourcesCore::UserDataOperator>
moab::Interface& MoFEM::OpPostProcMapInMoab< DIM1, DIM2, O >::postProcMesh
private

Definition at line 740 of file PostProcBrokenMeshInMoabBase.hpp.


The documentation for this struct was generated from the following file: