v0.14.0
Public Member Functions | Protected Attributes | List of all members
MoFEM::OpCalculateTensor2FieldValues_General< Tensor_Dim0, Tensor_Dim1, double, ublas::row_major, DoubleAllocator > Struct Template Reference

#include <src/finite_elements/UserDataOperators.hpp>

Inheritance diagram for MoFEM::OpCalculateTensor2FieldValues_General< Tensor_Dim0, Tensor_Dim1, double, ublas::row_major, DoubleAllocator >:
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Collaboration diagram for MoFEM::OpCalculateTensor2FieldValues_General< Tensor_Dim0, Tensor_Dim1, double, ublas::row_major, DoubleAllocator >:
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Public Member Functions

 OpCalculateTensor2FieldValues_General (const std::string field_name, boost::shared_ptr< ublas::matrix< double, ublas::row_major, DoubleAllocator >> data_ptr, const EntityType zero_type=MBVERTEX)
 
 OpCalculateTensor2FieldValues_General (const std::string field_name, boost::shared_ptr< ublas::matrix< double, ublas::row_major, DoubleAllocator >> data_ptr, SmartPetscObj< Vec > data_vec, const EntityType zero_type=MBVERTEX)
 
Tensor field values at integration points
MoFEMErrorCode doWork (int side, EntityType type, EntitiesFieldData::EntData &data)
 Operator for linear form, usually to calculate values on right hand side. More...
 
- Public Member Functions inherited from MoFEM::ForcesAndSourcesCore::UserDataOperator
 UserDataOperator (const FieldSpace space, const char type=OPSPACE, const bool symm=true)
 
 UserDataOperator (const std::string field_name, const char type, const bool symm=true)
 
 UserDataOperator (const std::string row_field_name, const std::string col_field_name, const char type, const bool symm=true)
 
boost::shared_ptr< const NumeredEntFiniteElementgetNumeredEntFiniteElementPtr () const
 Return raw pointer to NumeredEntFiniteElement. More...
 
EntityHandle getFEEntityHandle () const
 Return finite element entity handle. More...
 
int getFEDim () const
 Get dimension of finite element. More...
 
EntityType getFEType () const
 Get dimension of finite element. More...
 
boost::weak_ptr< SideNumbergetSideNumberPtr (const int side_number, const EntityType type)
 Get the side number pointer. More...
 
EntityHandle getSideEntity (const int side_number, const EntityType type)
 Get the side entity. More...
 
int getNumberOfNodesOnElement () const
 Get the number of nodes on finite element. More...
 
MoFEMErrorCode getProblemRowIndices (const std::string filed_name, const EntityType type, const int side, VectorInt &indices) const
 Get row indices. More...
 
MoFEMErrorCode getProblemColIndices (const std::string filed_name, const EntityType type, const int side, VectorInt &indices) const
 Get col indices. More...
 
const FEMethodgetFEMethod () const
 Return raw pointer to Finite Element Method object. More...
 
int getOpType () const
 Get operator types. More...
 
void setOpType (const OpType type)
 Set operator type. More...
 
void addOpType (const OpType type)
 Add operator type. More...
 
int getNinTheLoop () const
 get number of finite element in the loop More...
 
int getLoopSize () const
 get size of elements in the loop More...
 
std::string getFEName () const
 Get name of the element. More...
 
ForcesAndSourcesCoregetPtrFE () const
 
ForcesAndSourcesCoregetSidePtrFE () const
 
ForcesAndSourcesCoregetRefinePtrFE () const
 
const PetscData::SwitchesgetDataCtx () const
 
const KspMethod::KSPContext getKSPCtx () const
 
const SnesMethod::SNESContext getSNESCtx () const
 
const TSMethod::TSContext getTSCtx () const
 
Vec getKSPf () const
 
Mat getKSPA () const
 
Mat getKSPB () const
 
Vec getSNESf () const
 
Vec getSNESx () const
 
Mat getSNESA () const
 
Mat getSNESB () const
 
Vec getTSu () const
 
Vec getTSu_t () const
 
Vec getTSu_tt () const
 
Vec getTSf () const
 
Mat getTSA () const
 
Mat getTSB () const
 
int getTSstep () const
 
double getTStime () const
 
double getTStimeStep () const
 
double getTSa () const
 
double getTSaa () const
 
MatrixDoublegetGaussPts ()
 matrix of integration (Gauss) points for Volume Element More...
 
auto getFTensor0IntegrationWeight ()
 Get integration weights. More...
 
MatrixDoublegetCoordsAtGaussPts ()
 Gauss points and weight, matrix (nb. of points x 3) More...
 
auto getFTensor1CoordsAtGaussPts ()
 Get coordinates at integration points assuming linear geometry. More...
 
double getMeasure () const
 get measure of element More...
 
doublegetMeasure ()
 get measure of element More...
 
MoFEMErrorCode loopSide (const string &fe_name, ForcesAndSourcesCore *side_fe, const size_t dim, const EntityHandle ent_for_side=0, const int verb=QUIET, const LogManager::SeverityLevel sev=Sev::noisy, AdjCache *adj_cache=nullptr)
 User calls this function to loop over elements on the side of face. This function calls finite element with its operator to do calculations. More...
 
MoFEMErrorCode loopThis (const string &fe_name, ForcesAndSourcesCore *this_fe, const int verb=QUIET, const LogManager::SeverityLevel sev=Sev::noisy)
 User calls this function to loop over the same element using a different set of integration points. This function calls finite element with its operator to do calculations. More...
 
MoFEMErrorCode loopParent (const string &fe_name, ForcesAndSourcesCore *parent_fe, const int verb=QUIET, const LogManager::SeverityLevel sev=Sev::noisy)
 User calls this function to loop over parent elements. This function calls finite element with its operator to do calculations. More...
 
MoFEMErrorCode loopChildren (const string &fe_name, ForcesAndSourcesCore *child_fe, const int verb=QUIET, const LogManager::SeverityLevel sev=Sev::noisy)
 User calls this function to loop over parent elements. This function calls finite element with its operator to do calculations. More...
 
- Public Member Functions inherited from MoFEM::DataOperator
 DataOperator (const bool symm=true)
 
virtual ~DataOperator ()=default
 
virtual MoFEMErrorCode doWork (int row_side, int col_side, EntityType row_type, EntityType col_type, EntitiesFieldData::EntData &row_data, EntitiesFieldData::EntData &col_data)
 Operator for bi-linear form, usually to calculate values on left hand side. More...
 
virtual MoFEMErrorCode opLhs (EntitiesFieldData &row_data, EntitiesFieldData &col_data)
 
virtual MoFEMErrorCode opRhs (EntitiesFieldData &data, const bool error_if_no_base=false)
 
bool getSymm () const
 Get if operator uses symmetry of DOFs or not. More...
 
void setSymm ()
 set if operator is executed taking in account symmetry More...
 
void unSetSymm ()
 unset if operator is executed for non symmetric problem More...
 

Protected Attributes

boost::shared_ptr< ublas::matrix< double, ublas::row_major, DoubleAllocator > > dataPtr
 
const EntityHandle zeroType
 
SmartPetscObj< Vec > dataVec
 
VectorDouble dotVector
 
- Protected Attributes inherited from MoFEM::ForcesAndSourcesCore::UserDataOperator
ForcesAndSourcesCoreptrFE
 

Additional Inherited Members

- Public Types inherited from MoFEM::ForcesAndSourcesCore::UserDataOperator
enum  OpType {
  OPROW = 1 << 0, OPCOL = 1 << 1, OPROWCOL = 1 << 2, OPSPACE = 1 << 3,
  OPLAST = 1 << 3
}
 Controls loop over entities on element. More...
 
using AdjCache = std::map< EntityHandle, std::vector< boost::weak_ptr< NumeredEntFiniteElement > >>
 
- Public Types inherited from MoFEM::DataOperator
using DoWorkLhsHookFunType = boost::function< MoFEMErrorCode(DataOperator *op_ptr, int row_side, int col_side, EntityType row_type, EntityType col_type, EntitiesFieldData::EntData &row_data, EntitiesFieldData::EntData &col_data)>
 
using DoWorkRhsHookFunType = boost::function< MoFEMErrorCode(DataOperator *op_ptr, int side, EntityType type, EntitiesFieldData::EntData &data)>
 
- Public Attributes inherited from MoFEM::ForcesAndSourcesCore::UserDataOperator
char opType
 
std::string rowFieldName
 
std::string colFieldName
 
FieldSpace sPace
 
- Public Attributes inherited from MoFEM::DataOperator
DoWorkLhsHookFunType doWorkLhsHook
 
DoWorkRhsHookFunType doWorkRhsHook
 
bool sYmm
 If true assume that matrix is symmetric structure. More...
 
std::array< bool, MBMAXTYPE > doEntities
 If true operator is executed for entity. More...
 
booldoVertices
 \deprectaed If false skip vertices More...
 
booldoEdges
 \deprectaed If false skip edges More...
 
booldoQuads
 \deprectaed More...
 
booldoTris
 \deprectaed More...
 
booldoTets
 \deprectaed More...
 
booldoPrisms
 \deprectaed More...
 
- Static Public Attributes inherited from MoFEM::ForcesAndSourcesCore::UserDataOperator
static const char *const OpTypeNames []
 
- Protected Member Functions inherited from MoFEM::ForcesAndSourcesCore::UserDataOperator
virtual MoFEMErrorCode setPtrFE (ForcesAndSourcesCore *ptr)
 

Detailed Description

template<int Tensor_Dim0, int Tensor_Dim1>
struct MoFEM::OpCalculateTensor2FieldValues_General< Tensor_Dim0, Tensor_Dim1, double, ublas::row_major, DoubleAllocator >

Definition at line 782 of file UserDataOperators.hpp.

Constructor & Destructor Documentation

◆ OpCalculateTensor2FieldValues_General() [1/2]

template<int Tensor_Dim0, int Tensor_Dim1>
MoFEM::OpCalculateTensor2FieldValues_General< Tensor_Dim0, Tensor_Dim1, double, ublas::row_major, DoubleAllocator >::OpCalculateTensor2FieldValues_General ( const std::string  field_name,
boost::shared_ptr< ublas::matrix< double, ublas::row_major, DoubleAllocator >>  data_ptr,
const EntityType  zero_type = MBVERTEX 
)
inline

Definition at line 786 of file UserDataOperators.hpp.

794  dataPtr(data_ptr), zeroType(zero_type) {
795  if (!dataPtr)
796  THROW_MESSAGE("Pointer is not set");
797  }

◆ OpCalculateTensor2FieldValues_General() [2/2]

template<int Tensor_Dim0, int Tensor_Dim1>
MoFEM::OpCalculateTensor2FieldValues_General< Tensor_Dim0, Tensor_Dim1, double, ublas::row_major, DoubleAllocator >::OpCalculateTensor2FieldValues_General ( const std::string  field_name,
boost::shared_ptr< ublas::matrix< double, ublas::row_major, DoubleAllocator >>  data_ptr,
SmartPetscObj< Vec >  data_vec,
const EntityType  zero_type = MBVERTEX 
)
inline

Definition at line 799 of file UserDataOperators.hpp.

807  dataPtr(data_ptr), zeroType(zero_type), dataVec(data_vec) {
808  if (!dataPtr)
809  THROW_MESSAGE("Pointer is not set");
810  }

Member Function Documentation

◆ doWork()

template<int Tensor_Dim0, int Tensor_Dim1>
MoFEMErrorCode MoFEM::OpCalculateTensor2FieldValues_General< Tensor_Dim0, Tensor_Dim1, double, ublas::row_major, DoubleAllocator >::doWork ( int  side,
EntityType  type,
EntitiesFieldData::EntData data 
)
virtual

Operator for linear form, usually to calculate values on right hand side.

Reimplemented from MoFEM::DataOperator.

Reimplemented in MoFEM::OpCalculateVectorFieldHessian< Tensor_Dim0, Tensor_Dim1 >, MoFEM::OpCalculateTensor2SymmetricFieldGradient_General< Tensor_Dim0, Tensor_Dim1, double, ublas::row_major, DoubleAllocator >, and MoFEM::OpCalculateVectorFieldGradient_General< Tensor_Dim0, Tensor_Dim1, double, ublas::row_major, DoubleAllocator >.

Definition at line 826 of file UserDataOperators.hpp.

827  {
829 
830  MatrixDouble &mat = *dataPtr;
831  const size_t nb_gauss_pts = data.getN().size1();
832  if (type == zeroType) {
833  mat.resize(Tensor_Dim0 * Tensor_Dim1, nb_gauss_pts, false);
834  mat.clear();
835  }
836 
837  const size_t nb_dofs = data.getFieldData().size();
838 
839  if (dataVec.use_count()) {
840  dotVector.resize(nb_dofs, false);
841  const double *array;
842  CHKERR VecGetArrayRead(dataVec, &array);
843  const auto &local_indices = data.getLocalIndices();
844  for (int i = 0; i != local_indices.size(); ++i)
845  if (local_indices[i] != -1)
846  dotVector[i] = array[local_indices[i]];
847  else
848  dotVector[i] = 0;
849  CHKERR VecRestoreArrayRead(dataVec, &array);
850  data.getFieldData().swap(dotVector);
851  }
852 
853  if (nb_dofs) {
854  const size_t nb_base_functions = data.getN().size2();
855  auto base_function = data.getFTensor0N();
856  auto values_at_gauss_pts =
857  getFTensor2FromMat<Tensor_Dim0, Tensor_Dim1>(mat);
860  const size_t size = nb_dofs / (Tensor_Dim0 * Tensor_Dim1);
861  for (size_t gg = 0; gg != nb_gauss_pts; ++gg) {
862  auto field_data = data.getFTensor2FieldData<Tensor_Dim0, Tensor_Dim1>();
863  size_t bb = 0;
864  for (; bb != size; ++bb) {
865  values_at_gauss_pts(i, j) += field_data(i, j) * base_function;
866  ++field_data;
867  ++base_function;
868  }
869  for (; bb < nb_base_functions; ++bb)
870  ++base_function;
871  ++values_at_gauss_pts;
872  }
873 
874  if (dataVec.use_count()) {
875  data.getFieldData().swap(dotVector);
876  }
877  }
879 }

Member Data Documentation

◆ dataPtr

template<int Tensor_Dim0, int Tensor_Dim1>
boost::shared_ptr<ublas::matrix<double, ublas::row_major, DoubleAllocator> > MoFEM::OpCalculateTensor2FieldValues_General< Tensor_Dim0, Tensor_Dim1, double, ublas::row_major, DoubleAllocator >::dataPtr
protected

Definition at line 817 of file UserDataOperators.hpp.

◆ dataVec

template<int Tensor_Dim0, int Tensor_Dim1>
SmartPetscObj<Vec> MoFEM::OpCalculateTensor2FieldValues_General< Tensor_Dim0, Tensor_Dim1, double, ublas::row_major, DoubleAllocator >::dataVec
protected

Definition at line 819 of file UserDataOperators.hpp.

◆ dotVector

template<int Tensor_Dim0, int Tensor_Dim1>
VectorDouble MoFEM::OpCalculateTensor2FieldValues_General< Tensor_Dim0, Tensor_Dim1, double, ublas::row_major, DoubleAllocator >::dotVector
protected

Definition at line 820 of file UserDataOperators.hpp.

◆ zeroType

template<int Tensor_Dim0, int Tensor_Dim1>
const EntityHandle MoFEM::OpCalculateTensor2FieldValues_General< Tensor_Dim0, Tensor_Dim1, double, ublas::row_major, DoubleAllocator >::zeroType
protected

Definition at line 818 of file UserDataOperators.hpp.


The documentation for this struct was generated from the following file:
MoFEM::Types::MatrixDouble
UBlasMatrix< double > MatrixDouble
Definition: Types.hpp:77
MoFEM::OpCalculateTensor2FieldValues_General< Tensor_Dim0, Tensor_Dim1, double, ublas::row_major, DoubleAllocator >::dotVector
VectorDouble dotVector
Definition: UserDataOperators.hpp:820
MoFEM::OpCalculateTensor2FieldValues_General< Tensor_Dim0, Tensor_Dim1, double, ublas::row_major, DoubleAllocator >::dataVec
SmartPetscObj< Vec > dataVec
Definition: UserDataOperators.hpp:819
THROW_MESSAGE
#define THROW_MESSAGE(msg)
Throw MoFEM exception.
Definition: definitions.h:574
MoFEM::OpCalculateTensor2FieldValues_General< Tensor_Dim0, Tensor_Dim1, double, ublas::row_major, DoubleAllocator >::zeroType
const EntityHandle zeroType
Definition: UserDataOperators.hpp:818
CHKERR
#define CHKERR
Inline error check.
Definition: definitions.h:548
MoFEM::OpCalculateTensor2FieldValues_General< Tensor_Dim0, Tensor_Dim1, double, ublas::row_major, DoubleAllocator >::dataPtr
boost::shared_ptr< ublas::matrix< double, ublas::row_major, DoubleAllocator > > dataPtr
Definition: UserDataOperators.hpp:817
MoFEM::SmartPetscObj::use_count
int use_count() const
Definition: PetscSmartObj.hpp:109
convert.type
type
Definition: convert.py:64
MoFEM::ForcesAndSourcesCore::UserDataOperator
friend class UserDataOperator
Definition: ForcesAndSourcesCore.hpp:482
i
FTensor::Index< 'i', SPACE_DIM > i
Definition: hcurl_divergence_operator_2d.cpp:27
field_name
constexpr auto field_name
Definition: poisson_2d_homogeneous.cpp:13
FTensor::Index
Definition: Index.hpp:23
j
FTensor::Index< 'j', 3 > j
Definition: matrix_function.cpp:19
MoFEMFunctionReturn
#define MoFEMFunctionReturn(a)
Last executable line of each PETSc function used for error handling. Replaces return()
Definition: definitions.h:429
MoFEMFunctionBegin
#define MoFEMFunctionBegin
First executable line of each MoFEM function, used for error handling. Final line of MoFEM functions ...
Definition: definitions.h:359
MoFEM::ForcesAndSourcesCore::UserDataOperator::OPROW
@ OPROW
operator doWork function is executed on FE rows
Definition: ForcesAndSourcesCore.hpp:567