v0.14.0
Public Member Functions | Public Attributes | List of all members
OpPostProcStress Struct Reference

#include <users_modules/tutorials/cor-7/src/ElasticityMixedFormulation.hpp>

Inheritance diagram for OpPostProcStress:
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Collaboration diagram for OpPostProcStress:
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Public Member Functions

 OpPostProcStress (moab::Interface &post_proc_mesh, std::vector< EntityHandle > &map_gauss_pts, DataAtIntegrationPts &common_data, BlockData &data)
 
PetscErrorCode doWork (int side, EntityType type, EntitiesFieldData::EntData &data)
 
- Public Member Functions inherited from MoFEM::VolumeElementForcesAndSourcesCore::UserDataOperator
int getNumNodes ()
 get element number of nodes More...
 
const EntityHandlegetConn ()
 get element connectivity More...
 
double getVolume () const
 element volume (linear geometry) More...
 
doublegetVolume ()
 element volume (linear geometry) More...
 
FTensor::Tensor2< double *, 3, 3 > & getJac ()
 get element Jacobian More...
 
FTensor::Tensor2< double *, 3, 3 > & getInvJac ()
 get element inverse Jacobian More...
 
VectorDoublegetCoords ()
 nodal coordinates More...
 
VolumeElementForcesAndSourcesCoregetVolumeFE () const
 return pointer to Generic Volume Finite Element object More...
 
- Public Member Functions inherited from MoFEM::ForcesAndSourcesCore::UserDataOperator
 UserDataOperator (const FieldSpace space, const char type=OPSPACE, const bool symm=true)
 
 UserDataOperator (const std::string field_name, const char type, const bool symm=true)
 
 UserDataOperator (const std::string row_field_name, const std::string col_field_name, const char type, const bool symm=true)
 
boost::shared_ptr< const NumeredEntFiniteElementgetNumeredEntFiniteElementPtr () const
 Return raw pointer to NumeredEntFiniteElement. More...
 
EntityHandle getFEEntityHandle () const
 Return finite element entity handle. More...
 
int getFEDim () const
 Get dimension of finite element. More...
 
EntityType getFEType () const
 Get dimension of finite element. More...
 
boost::weak_ptr< SideNumbergetSideNumberPtr (const int side_number, const EntityType type)
 Get the side number pointer. More...
 
EntityHandle getSideEntity (const int side_number, const EntityType type)
 Get the side entity. More...
 
int getNumberOfNodesOnElement () const
 Get the number of nodes on finite element. More...
 
MoFEMErrorCode getProblemRowIndices (const std::string filed_name, const EntityType type, const int side, VectorInt &indices) const
 Get row indices. More...
 
MoFEMErrorCode getProblemColIndices (const std::string filed_name, const EntityType type, const int side, VectorInt &indices) const
 Get col indices. More...
 
const FEMethodgetFEMethod () const
 Return raw pointer to Finite Element Method object. More...
 
int getOpType () const
 Get operator types. More...
 
void setOpType (const OpType type)
 Set operator type. More...
 
void addOpType (const OpType type)
 Add operator type. More...
 
int getNinTheLoop () const
 get number of finite element in the loop More...
 
int getLoopSize () const
 get size of elements in the loop More...
 
std::string getFEName () const
 Get name of the element. More...
 
ForcesAndSourcesCoregetPtrFE () const
 
ForcesAndSourcesCoregetSidePtrFE () const
 
ForcesAndSourcesCoregetRefinePtrFE () const
 
const PetscData::SwitchesgetDataCtx () const
 
const KspMethod::KSPContext getKSPCtx () const
 
const SnesMethod::SNESContext getSNESCtx () const
 
const TSMethod::TSContext getTSCtx () const
 
Vec getKSPf () const
 
Mat getKSPA () const
 
Mat getKSPB () const
 
Vec getSNESf () const
 
Vec getSNESx () const
 
Mat getSNESA () const
 
Mat getSNESB () const
 
Vec getTSu () const
 
Vec getTSu_t () const
 
Vec getTSu_tt () const
 
Vec getTSf () const
 
Mat getTSA () const
 
Mat getTSB () const
 
int getTSstep () const
 
double getTStime () const
 
double getTStimeStep () const
 
double getTSa () const
 
double getTSaa () const
 
MatrixDoublegetGaussPts ()
 matrix of integration (Gauss) points for Volume Element More...
 
auto getFTensor0IntegrationWeight ()
 Get integration weights. More...
 
MatrixDoublegetCoordsAtGaussPts ()
 Gauss points and weight, matrix (nb. of points x 3) More...
 
auto getFTensor1CoordsAtGaussPts ()
 Get coordinates at integration points assuming linear geometry. More...
 
double getMeasure () const
 get measure of element More...
 
doublegetMeasure ()
 get measure of element More...
 
MoFEMErrorCode loopSide (const string &fe_name, ForcesAndSourcesCore *side_fe, const size_t dim, const EntityHandle ent_for_side=0, const int verb=QUIET, const LogManager::SeverityLevel sev=Sev::noisy, AdjCache *adj_cache=nullptr)
 User calls this function to loop over elements on the side of face. This function calls finite element with its operator to do calculations. More...
 
MoFEMErrorCode loopThis (const string &fe_name, ForcesAndSourcesCore *this_fe, const int verb=QUIET, const LogManager::SeverityLevel sev=Sev::noisy)
 User calls this function to loop over the same element using a different set of integration points. This function calls finite element with its operator to do calculations. More...
 
MoFEMErrorCode loopParent (const string &fe_name, ForcesAndSourcesCore *parent_fe, const int verb=QUIET, const LogManager::SeverityLevel sev=Sev::noisy)
 User calls this function to loop over parent elements. This function calls finite element with its operator to do calculations. More...
 
MoFEMErrorCode loopChildren (const string &fe_name, ForcesAndSourcesCore *child_fe, const int verb=QUIET, const LogManager::SeverityLevel sev=Sev::noisy)
 User calls this function to loop over parent elements. This function calls finite element with its operator to do calculations. More...
 
- Public Member Functions inherited from MoFEM::DataOperator
 DataOperator (const bool symm=true)
 
virtual ~DataOperator ()=default
 
virtual MoFEMErrorCode doWork (int row_side, int col_side, EntityType row_type, EntityType col_type, EntitiesFieldData::EntData &row_data, EntitiesFieldData::EntData &col_data)
 Operator for bi-linear form, usually to calculate values on left hand side. More...
 
virtual MoFEMErrorCode opLhs (EntitiesFieldData &row_data, EntitiesFieldData &col_data)
 
virtual MoFEMErrorCode doWork (int side, EntityType type, EntitiesFieldData::EntData &data)
 Operator for linear form, usually to calculate values on right hand side. More...
 
virtual MoFEMErrorCode opRhs (EntitiesFieldData &data, const bool error_if_no_base=false)
 
bool getSymm () const
 Get if operator uses symmetry of DOFs or not. More...
 
void setSymm ()
 set if operator is executed taking in account symmetry More...
 
void unSetSymm ()
 unset if operator is executed for non symmetric problem More...
 

Public Attributes

DataAtIntegrationPtscommonData
 
moab::Interface & postProcMesh
 
std::vector< EntityHandle > & mapGaussPts
 
BlockDatadAta
 
- Public Attributes inherited from MoFEM::ForcesAndSourcesCore::UserDataOperator
char opType
 
std::string rowFieldName
 
std::string colFieldName
 
FieldSpace sPace
 
- Public Attributes inherited from MoFEM::DataOperator
DoWorkLhsHookFunType doWorkLhsHook
 
DoWorkRhsHookFunType doWorkRhsHook
 
bool sYmm
 If true assume that matrix is symmetric structure. More...
 
std::array< bool, MBMAXTYPE > doEntities
 If true operator is executed for entity. More...
 
booldoVertices
 \deprectaed If false skip vertices More...
 
booldoEdges
 \deprectaed If false skip edges More...
 
booldoQuads
 \deprectaed More...
 
booldoTris
 \deprectaed More...
 
booldoTets
 \deprectaed More...
 
booldoPrisms
 \deprectaed More...
 

Additional Inherited Members

- Public Types inherited from MoFEM::ForcesAndSourcesCore::UserDataOperator
enum  OpType {
  OPROW = 1 << 0, OPCOL = 1 << 1, OPROWCOL = 1 << 2, OPSPACE = 1 << 3,
  OPLAST = 1 << 3
}
 Controls loop over entities on element. More...
 
using AdjCache = std::map< EntityHandle, std::vector< boost::weak_ptr< NumeredEntFiniteElement > >>
 
- Public Types inherited from MoFEM::DataOperator
using DoWorkLhsHookFunType = boost::function< MoFEMErrorCode(DataOperator *op_ptr, int row_side, int col_side, EntityType row_type, EntityType col_type, EntitiesFieldData::EntData &row_data, EntitiesFieldData::EntData &col_data)>
 
using DoWorkRhsHookFunType = boost::function< MoFEMErrorCode(DataOperator *op_ptr, int side, EntityType type, EntitiesFieldData::EntData &data)>
 
- Static Public Attributes inherited from MoFEM::ForcesAndSourcesCore::UserDataOperator
static const char *const OpTypeNames []
 
- Protected Member Functions inherited from MoFEM::VolumeElementForcesAndSourcesCore::UserDataOperator
MoFEMErrorCode setPtrFE (ForcesAndSourcesCore *ptr)
 
- Protected Attributes inherited from MoFEM::ForcesAndSourcesCore::UserDataOperator
ForcesAndSourcesCoreptrFE
 

Detailed Description

Examples
elasticity_mixed_formulation.cpp, ElasticityMixedFormulation.hpp, Remodeling.cpp, and Remodeling.hpp.

Definition at line 429 of file ElasticityMixedFormulation.hpp.

Constructor & Destructor Documentation

◆ OpPostProcStress()

OpPostProcStress::OpPostProcStress ( moab::Interface &  post_proc_mesh,
std::vector< EntityHandle > &  map_gauss_pts,
DataAtIntegrationPts common_data,
BlockData data 
)
inline
Examples
ElasticityMixedFormulation.hpp, and Remodeling.cpp.

Definition at line 436 of file ElasticityMixedFormulation.hpp.

441  commonData(common_data), postProcMesh(post_proc_mesh),
442  mapGaussPts(map_gauss_pts), dAta(data) {
443  doVertices = true;
444  doEdges = false;
445  doQuads = false;
446  doTris = false;
447  doTets = false;
448  doPrisms = false;
449  }

Member Function Documentation

◆ doWork()

PetscErrorCode OpPostProcStress::doWork ( int  side,
EntityType  type,
EntitiesFieldData::EntData data 
)
inline
Examples
ElasticityMixedFormulation.hpp, and Remodeling.cpp.

Definition at line 451 of file ElasticityMixedFormulation.hpp.

452  {
454  if (type != MBVERTEX)
455  PetscFunctionReturn(9);
456  double def_VAL[9];
457  bzero(def_VAL, 9 * sizeof(double));
458 
459  if (dAta.tEts.find(getNumeredEntFiniteElementPtr()->getEnt()) ==
460  dAta.tEts.end()) {
462  }
464 
465  Tag th_stress;
466  CHKERR postProcMesh.tag_get_handle("STRESS", 9, MB_TYPE_DOUBLE, th_stress,
467  MB_TAG_CREAT | MB_TAG_SPARSE, def_VAL);
468  Tag th_strain;
469  CHKERR postProcMesh.tag_get_handle("STRAIN", 9, MB_TYPE_DOUBLE, th_strain,
470  MB_TAG_CREAT | MB_TAG_SPARSE, def_VAL);
471  Tag th_psi;
472  CHKERR postProcMesh.tag_get_handle("ENERGY", 1, MB_TYPE_DOUBLE, th_psi,
473  MB_TAG_CREAT | MB_TAG_SPARSE, def_VAL);
474 
475  auto grad = getFTensor2FromMat<3, 3>(*commonData.gradDispPtr);
477 
478  const int nb_gauss_pts = commonData.gradDispPtr->size2();
479  const double mu = commonData.mU;
480 
485 
486  for (int gg = 0; gg != nb_gauss_pts; gg++) {
487  strain(i, j) = 0.5 * (grad(i, j) + grad(j, i));
488  double psi = 0.5 * p * p + mu * strain(i, j) * strain(i, j);
489 
490  stress(i, j) = 2 * mu * strain(i, j);
491  stress(1, 1) -= p;
492  stress(0, 0) -= p;
493  stress(2, 2) -= p;
494 
495  CHKERR postProcMesh.tag_set_data(th_psi, &mapGaussPts[gg], 1, &psi);
496  CHKERR postProcMesh.tag_set_data(th_strain, &mapGaussPts[gg], 1,
497  &strain(0, 0));
498  CHKERR postProcMesh.tag_set_data(th_stress, &mapGaussPts[gg], 1,
499  &stress(0, 0));
500  ++p;
501  ++grad;
502  }
503 
505  }

Member Data Documentation

◆ commonData

DataAtIntegrationPts& OpPostProcStress::commonData

◆ dAta

BlockData& OpPostProcStress::dAta

◆ mapGaussPts

std::vector<EntityHandle>& OpPostProcStress::mapGaussPts

◆ postProcMesh

moab::Interface& OpPostProcStress::postProcMesh

The documentation for this struct was generated from the following file:
MoFEMFunctionReturnHot
#define MoFEMFunctionReturnHot(a)
Last executable line of each PETSc function used for error handling. Replaces return()
Definition: definitions.h:447
MoFEM::DataOperator::doTris
bool & doTris
\deprectaed
Definition: DataOperators.hpp:93
OpPostProcStress::commonData
DataAtIntegrationPts & commonData
Definition: ElasticityMixedFormulation.hpp:431
DataAtIntegrationPts::mU
double mU
Definition: ElasticityMixedFormulation.hpp:29
OpPostProcStress::postProcMesh
moab::Interface & postProcMesh
Definition: ElasticityMixedFormulation.hpp:432
MoFEM::DataOperator::doPrisms
bool & doPrisms
\deprectaed
Definition: DataOperators.hpp:95
MoFEM::DataOperator::doTets
bool & doTets
\deprectaed
Definition: DataOperators.hpp:94
DataAtIntegrationPts::getBlockData
MoFEMErrorCode getBlockData(BlockData &data)
Definition: ElasticityMixedFormulation.hpp:52
MoFEM::DataOperator::doVertices
bool & doVertices
\deprectaed If false skip vertices
Definition: DataOperators.hpp:90
FTensor::Tensor2< double, 3, 3 >
OpPostProcStress::mapGaussPts
std::vector< EntityHandle > & mapGaussPts
Definition: ElasticityMixedFormulation.hpp:433
CHKERR
#define CHKERR
Inline error check.
Definition: definitions.h:535
convert.type
type
Definition: convert.py:64
MoFEM::getFTensor0FromVec
static auto getFTensor0FromVec(ublas::vector< T, A > &data)
Get tensor rank 0 (scalar) form data vector.
Definition: Templates.hpp:135
OpPostProcStress::dAta
BlockData & dAta
Definition: ElasticityMixedFormulation.hpp:434
MoFEM::ForcesAndSourcesCore::UserDataOperator::getNumeredEntFiniteElementPtr
boost::shared_ptr< const NumeredEntFiniteElement > getNumeredEntFiniteElementPtr() const
Return raw pointer to NumeredEntFiniteElement.
Definition: ForcesAndSourcesCore.hpp:999
MoFEM::DataOperator::doQuads
bool & doQuads
\deprectaed
Definition: DataOperators.hpp:92
i
FTensor::Index< 'i', SPACE_DIM > i
Definition: hcurl_divergence_operator_2d.cpp:27
FTensor::Index< 'i', 3 >
BlockData::tEts
Range tEts
Definition: ElasticityMixedFormulation.hpp:17
MoFEM::DataOperator::doEdges
bool & doEdges
\deprectaed If false skip edges
Definition: DataOperators.hpp:91
DataAtIntegrationPts::pPtr
boost::shared_ptr< VectorDouble > pPtr
Definition: ElasticityMixedFormulation.hpp:23
DataAtIntegrationPts::gradDispPtr
boost::shared_ptr< MatrixDouble > gradDispPtr
Definition: ElasticityMixedFormulation.hpp:22
UserDataOperator
ForcesAndSourcesCore::UserDataOperator UserDataOperator
Definition: HookeElement.hpp:75
j
FTensor::Index< 'j', 3 > j
Definition: matrix_function.cpp:19
mu
double mu
Definition: dynamic_first_order_con_law.cpp:98
MoFEMFunctionReturn
#define MoFEMFunctionReturn(a)
Last executable line of each PETSc function used for error handling. Replaces return()
Definition: definitions.h:416
MoFEMFunctionBegin
#define MoFEMFunctionBegin
First executable line of each MoFEM function, used for error handling. Final line of MoFEM functions ...
Definition: definitions.h:346
MoFEM::ForcesAndSourcesCore::UserDataOperator::OPROW
@ OPROW
operator doWork function is executed on FE rows
Definition: ForcesAndSourcesCore.hpp:567