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Public Member Functions | Protected Member Functions | List of all members
OpAleLhs_dx_dX< S > Struct Template Reference

#include "users_modules/basic_finite_elements/src/HookeElement.hpp"

Inheritance diagram for OpAleLhs_dx_dX< S >:
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Collaboration diagram for OpAleLhs_dx_dX< S >:
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Public Member Functions

 OpAleLhs_dx_dX (const std::string row_field, const std::string col_field, boost::shared_ptr< DataAtIntegrationPts > &data_at_pts)
 
- Public Member Functions inherited from OpAssemble
 OpAssemble (const std::string row_field, const std::string col_field, boost::shared_ptr< DataAtIntegrationPts > data_at_pts, const char type, bool symm=false)
 
MoFEMErrorCode doWork (int row_side, int col_side, EntityType row_type, EntityType col_type, EntData &row_data, EntData &col_data)
 Do calculations for give operator.
 
MoFEMErrorCode doWork (int row_side, EntityType row_type, EntData &row_data)
 Operator for linear form, usually to calculate values on right hand side.
 
- Public Member Functions inherited from MoFEM::VolumeElementForcesAndSourcesCore::UserDataOperator
int getNumNodes ()
 get element number of nodes
 
const EntityHandle * getConn ()
 get element connectivity
 
double getVolume () const
 element volume (linear geometry)
 
doublegetVolume ()
 element volume (linear geometry)
 
FTensor::Tensor2< double *, 3, 3 > & getJac ()
 get element Jacobian
 
FTensor::Tensor2< double *, 3, 3 > & getInvJac ()
 get element inverse Jacobian
 
VectorDoublegetCoords ()
 nodal coordinates
 
VolumeElementForcesAndSourcesCoregetVolumeFE () const
 return pointer to Generic Volume Finite Element object
 
- Public Member Functions inherited from MoFEM::ForcesAndSourcesCore::UserDataOperator
 UserDataOperator (const FieldSpace space, const char type=OPSPACE, const bool symm=true)
 Constructor for operators working on finite element spaces.
 
 UserDataOperator (const std::string field_name, const char type, const bool symm=true)
 Constructor for operators working on a single field.
 
 UserDataOperator (const std::string row_field_name, const std::string col_field_name, const char type, const bool symm=true)
 Constructor for operators working on two fields (bilinear forms)
 
boost::shared_ptr< const NumeredEntFiniteElementgetNumeredEntFiniteElementPtr () const
 Return raw pointer to NumeredEntFiniteElement.
 
EntityHandle getFEEntityHandle () const
 Return finite element entity handle.
 
int getFEDim () const
 Get dimension of finite element.
 
EntityType getFEType () const
 Get dimension of finite element.
 
boost::weak_ptr< SideNumbergetSideNumberPtr (const int side_number, const EntityType type)
 Get the side number pointer.
 
EntityHandle getSideEntity (const int side_number, const EntityType type)
 Get the side entity.
 
int getNumberOfNodesOnElement () const
 Get the number of nodes on finite element.
 
MoFEMErrorCode getProblemRowIndices (const std::string filed_name, const EntityType type, const int side, VectorInt &indices) const
 Get row indices.
 
MoFEMErrorCode getProblemColIndices (const std::string filed_name, const EntityType type, const int side, VectorInt &indices) const
 Get col indices.
 
const FEMethodgetFEMethod () const
 Return raw pointer to Finite Element Method object.
 
int getOpType () const
 Get operator types.
 
void setOpType (const OpType type)
 Set operator type.
 
void addOpType (const OpType type)
 Add operator type.
 
int getNinTheLoop () const
 get number of finite element in the loop
 
int getLoopSize () const
 get size of elements in the loop
 
std::string getFEName () const
 Get name of the element.
 
ForcesAndSourcesCoregetPtrFE () const
 
ForcesAndSourcesCoregetSidePtrFE () const
 
ForcesAndSourcesCoregetRefinePtrFE () const
 
const PetscData::SwitchesgetDataCtx () const
 
KspMethod::KSPContext getKSPCtx () const
 
SnesMethod::SNESContext getSNESCtx () const
 
TSMethod::TSContext getTSCtx () const
 
Vec getKSPf () const
 
Mat getKSPA () const
 
Mat getKSPB () const
 
Vec getSNESf () const
 
Vec getSNESx () const
 
Mat getSNESA () const
 
Mat getSNESB () const
 
Vec getTSu () const
 
Vec getTSu_t () const
 
Vec getTSu_tt () const
 
Vec getTSf () const
 
Mat getTSA () const
 
Mat getTSB () const
 
int getTSstep () const
 
double getTStime () const
 
double getTStimeStep () const
 
double getTSa () const
 
double getTSaa () const
 
MatrixDoublegetGaussPts ()
 matrix of integration (Gauss) points for Volume Element
 
auto getFTensor0IntegrationWeight ()
 Get integration weights.
 
MatrixDoublegetCoordsAtGaussPts ()
 Gauss points and weight, matrix (nb. of points x 3)
 
auto getFTensor1CoordsAtGaussPts ()
 Get coordinates at integration points assuming linear geometry.
 
double getMeasure () const
 get measure of element
 
doublegetMeasure ()
 get measure of element
 
MoFEM::InterfacegetMField ()
 
moab::Interface & getMoab ()
 
virtual boost::weak_ptr< ForcesAndSourcesCoregetSubPipelinePtr () const
 
MoFEMErrorCode loopSide (const string &fe_name, ForcesAndSourcesCore *side_fe, const size_t dim, const EntityHandle ent_for_side=0, boost::shared_ptr< Range > fe_range=nullptr, const int verb=QUIET, const LogManager::SeverityLevel sev=Sev::noisy, AdjCache *adj_cache=nullptr)
 User calls this function to loop over elements on the side of face. This function calls finite element with its operator to do calculations.
 
MoFEMErrorCode loopThis (const string &fe_name, ForcesAndSourcesCore *this_fe, const int verb=QUIET, const LogManager::SeverityLevel sev=Sev::noisy)
 User calls this function to loop over the same element using a different set of integration points. This function calls finite element with its operator to do calculations.
 
MoFEMErrorCode loopParent (const string &fe_name, ForcesAndSourcesCore *parent_fe, const int verb=QUIET, const LogManager::SeverityLevel sev=Sev::noisy)
 User calls this function to loop over parent elements. This function calls finite element with its operator to do calculations.
 
MoFEMErrorCode loopChildren (const string &fe_name, ForcesAndSourcesCore *child_fe, const int verb=QUIET, const LogManager::SeverityLevel sev=Sev::noisy)
 User calls this function to loop over parent elements. This function calls finite element with its operator to do calculations.
 
MoFEMErrorCode loopRange (const string &fe_name, ForcesAndSourcesCore *range_fe, boost::shared_ptr< Range > fe_range, const int verb=QUIET, const LogManager::SeverityLevel sev=Sev::noisy)
 Iterate over range of elements.
 
- Public Member Functions inherited from MoFEM::DataOperator
 DataOperator (const bool symm=true)
 
virtual ~DataOperator ()=default
 
virtual MoFEMErrorCode opLhs (EntitiesFieldData &row_data, EntitiesFieldData &col_data)
 
virtual MoFEMErrorCode opRhs (EntitiesFieldData &data, const bool error_if_no_base=false)
 
bool getSymm () const
 Get if operator uses symmetry of DOFs or not.
 
void setSymm ()
 set if operator is executed taking in account symmetry
 
void unSetSymm ()
 unset if operator is executed for non symmetric problem
 

Protected Member Functions

MoFEMErrorCode iNtegrate (EntData &row_data, EntData &col_data)
 Integrate tangent stiffness for spatial momentum.
 
- Protected Member Functions inherited from OpAssemble
virtual MoFEMErrorCode iNtegrate (EntData &row_data)
 
MoFEMErrorCode aSsemble (EntData &row_data, EntData &col_data)
 Assemble local entity block matrix.
 
MoFEMErrorCode aSsemble (EntData &row_data)
 Assemble local entity right-hand vector.
 
- Protected Member Functions inherited from MoFEM::VolumeElementForcesAndSourcesCore::UserDataOperator
MoFEMErrorCode setPtrFE (ForcesAndSourcesCore *ptr)
 

Additional Inherited Members

- Public Types inherited from MoFEM::ForcesAndSourcesCore::UserDataOperator
enum  OpType {
  OPROW = 1 << 0 , OPCOL = 1 << 1 , OPROWCOL = 1 << 2 , OPSPACE = 1 << 3 ,
  OPLAST = 1 << 3
}
 Controls loop over entities on element. More...
 
using AdjCache = std::map< EntityHandle, std::vector< boost::weak_ptr< NumeredEntFiniteElement > > >
 
- Public Types inherited from MoFEM::DataOperator
using DoWorkLhsHookFunType = boost::function< MoFEMErrorCode(DataOperator *op_ptr, int row_side, int col_side, EntityType row_type, EntityType col_type, EntitiesFieldData::EntData &row_data, EntitiesFieldData::EntData &col_data)>
 
using DoWorkRhsHookFunType = boost::function< MoFEMErrorCode(DataOperator *op_ptr, int side, EntityType type, EntitiesFieldData::EntData &data)>
 
- Public Attributes inherited from MoFEM::ForcesAndSourcesCore::UserDataOperator
char opType
 
std::string rowFieldName
 
std::string colFieldName
 
FieldSpace sPace
 
- Public Attributes inherited from MoFEM::DataOperator
DoWorkLhsHookFunType doWorkLhsHook
 
DoWorkRhsHookFunType doWorkRhsHook
 
bool sYmm
 If true assume that matrix is symmetric structure.
 
std::array< bool, MBMAXTYPE > doEntities
 If true operator is executed for entity.
 
booldoVertices
 \deprectaed If false skip vertices
 
booldoEdges
 \deprectaed If false skip edges
 
booldoQuads
 \deprectaed
 
booldoTris
 \deprectaed
 
booldoTets
 \deprectaed
 
booldoPrisms
 \deprectaed
 
- Static Public Attributes inherited from MoFEM::ForcesAndSourcesCore::UserDataOperator
static const char *const OpTypeNames []
 
- Protected Attributes inherited from OpAssemble
MatrixDouble K
 
MatrixDouble transK
 
VectorDouble nF
 
boost::shared_ptr< DataAtIntegrationPtsdataAtPts
 
VectorInt rowIndices
 
VectorInt colIndices
 
int nbRows
 number of dofs on rows
 
int nbCols
 number if dof on column
 
int nbIntegrationPts
 number of integration points
 
bool isDiag
 true if this block is on diagonal
 
- Protected Attributes inherited from MoFEM::ForcesAndSourcesCore::UserDataOperator
ForcesAndSourcesCoreptrFE
 

Detailed Description

template<int S = 0>
struct OpAleLhs_dx_dX< S >
Examples
mofem/users_modules/basic_finite_elements/src/HookeElement.hpp, and mofem/users_modules/basic_finite_elements/src/impl/HookeElement.cpp.

Definition at line 449 of file HookeElement.hpp.

Constructor & Destructor Documentation

◆ OpAleLhs_dx_dX()

template<int S>
OpAleLhs_dx_dX< S >::OpAleLhs_dx_dX ( const std::string  row_field,
const std::string  col_field,
boost::shared_ptr< DataAtIntegrationPts > &  data_at_pts 
)

Definition at line 1018 of file HookeElement.hpp.

1021 : OpAssemble(row_field, col_field, data_at_pts, OPROWCOL, false) {}
@ OPROWCOL
operator doWork is executed on FE rows &columns

Member Function Documentation

◆ iNtegrate()

template<int S>
MoFEMErrorCode OpAleLhs_dx_dX< S >::iNtegrate ( EntData row_data,
EntData col_data 
)
protectedvirtual

Integrate tangent stiffness for spatial momentum.

Parameters
row_datarow data (consist base functions on row entity)
col_datacolumn data (consist base functions on column entity)
Returns
error code

Reimplemented from OpAssemble.

Definition at line 1024 of file HookeElement.hpp.

1025 {
1027
1028 // get sub-block (3x3) of local stiffens matrix, here represented by
1029 // second order tensor
1030 auto get_tensor2 = [](MatrixDouble &m, const int r, const int c) {
1032 &m(r + 0, c + 0), &m(r + 0, c + 1), &m(r + 0, c + 2), &m(r + 1, c + 0),
1033 &m(r + 1, c + 1), &m(r + 1, c + 2), &m(r + 2, c + 0), &m(r + 2, c + 1),
1034 &m(r + 2, c + 2));
1035 };
1036
1037 FTensor::Index<'i', 3> i;
1038 FTensor::Index<'j', 3> j;
1039 FTensor::Index<'k', 3> k;
1040 FTensor::Index<'l', 3> l;
1041 FTensor::Index<'m', 3> m;
1042 FTensor::Index<'n', 3> n;
1043
1044 // get element volume
1045 double vol = getVolume();
1046
1047 // get intergrayion weights
1048 auto t_w = getFTensor0IntegrationWeight();
1049
1050 // get derivatives of base functions on rows
1051 auto t_row_diff_base = row_data.getFTensor1DiffN<3>();
1052 const int row_nb_base_fun = row_data.getN().size2();
1053
1054 // Elastic stiffness tensor (4th rank tensor with minor and major
1055 // symmetry)
1057 MAT_TO_DDG(dataAtPts->stiffnessMat));
1058
1059 auto t_cauchy_stress =
1061 *(dataAtPts->cauchyStressMat));
1062 auto t_h = getFTensor2FromMat<3, 3>(*dataAtPts->hMat);
1063 auto t_invH =
1064 getFTensor2FromMat<3, 3, -1, CoeffsByGauss>(*dataAtPts->invHMat);
1065 auto &det_H = *dataAtPts->detHVec;
1066
1067 // iterate over integration points
1068 for (int gg = 0; gg != nbIntegrationPts; ++gg) {
1069
1070 // calculate scalar weight times element volume
1071 double a = t_w * vol * det_H[gg];
1072
1074 t_F_dX(i, j, k, l) = -(t_h(i, m) * t_invH(m, k)) * t_invH(l, j);
1075
1076 // iterate over row base functions
1077 int rr = 0;
1078 for (; rr != nbRows / 3; ++rr) {
1079
1080 // get sub matrix for the row
1081 auto t_m = get_tensor2(K, 3 * rr, 0);
1082
1083 FTensor::Tensor1<double, 3> t_row_diff_base_pulled;
1084 t_row_diff_base_pulled(i) = t_row_diff_base(j) * t_invH(j, i);
1085
1086 FTensor::Tensor1<double, 3> t_row_stress;
1087 t_row_stress(i) = a * t_row_diff_base_pulled(j) * t_cauchy_stress(i, j);
1088
1089 FTensor::Tensor3<double, 3, 3, 3> t_row_diff_base_pulled_dX;
1090 t_row_diff_base_pulled_dX(j, k, l) =
1091 -(t_invH(i, k) * t_row_diff_base(i)) * t_invH(l, j);
1092
1093 FTensor::Tensor3<double, 3, 3, 3> t_row_dX_stress;
1094 t_row_dX_stress(i, k, l) =
1095 a * (t_row_diff_base_pulled_dX(j, k, l) * t_cauchy_stress(j, i));
1096
1098 t_row_D(l, j, k) = (a * t_row_diff_base_pulled(i)) * t_D(i, j, k, l);
1099
1100 FTensor::Tensor3<double, 3, 3, 3> t_row_stress_dX;
1101 // FIXME: This operator is not implemented, doing operation by hand
1102 // t_row_stress_dX(i, m, n) = t_row_D(i, k, l) * t_F_dX(k, l, m, n);
1103 t_row_stress_dX(i, j, k) = 0;
1104 for (int ii = 0; ii != 3; ++ii)
1105 for (int mm = 0; mm != 3; ++mm)
1106 for (int nn = 0; nn != 3; ++nn) {
1107 auto &v = t_row_stress_dX(ii, mm, nn);
1108 for (int kk = 0; kk != 3; ++kk)
1109 for (int ll = 0; ll != 3; ++ll)
1110 v += t_row_D(ii, kk, ll) * t_F_dX(kk, ll, mm, nn);
1111 }
1112
1113 // get derivatives of base functions for columns
1114 auto t_col_diff_base = col_data.getFTensor1DiffN<3>(gg, 0);
1115
1116 // iterate column base functions
1117 for (int cc = 0; cc != nbCols / 3; ++cc) {
1118
1119 t_m(i, k) += t_row_stress(i) * (t_invH(j, k) * t_col_diff_base(j));
1120 t_m(i, k) += t_row_dX_stress(i, k, l) * t_col_diff_base(l);
1121 t_m(i, k) += t_row_stress_dX(i, k, l) * t_col_diff_base(l);
1122
1123 // move to next column base function
1124 ++t_col_diff_base;
1125
1126 // move to next block of local stiffens matrix
1127 ++t_m;
1128 }
1129
1130 // move to next row base function
1131 ++t_row_diff_base;
1132 }
1133
1134 for (; rr != row_nb_base_fun; ++rr)
1135 ++t_row_diff_base;
1136
1137 // move to next integration weight
1138 ++t_w;
1139 ++t_D;
1140 ++t_cauchy_stress;
1141 ++t_invH;
1142 ++t_h;
1143 }
1144
1146}
#define MAT_TO_DDG(SM)
constexpr double a
#define MoFEMFunctionBegin
First executable line of each MoFEM function, used for error handling. Final line of MoFEM functions ...
#define MoFEMFunctionReturn(a)
Last executable line of each PETSc function used for error handling. Replaces return()
FTensor::Index< 'i', SPACE_DIM > i
const double c
speed of light (cm/ns)
const double v
phase velocity of light in medium (cm/ns)
const double n
refractive index of diffusive medium
FTensor::Index< 'l', 3 > l
FTensor::Index< 'j', 3 > j
FTensor::Index< 'k', 3 > k
auto getFTensor2FromMat(M &data)
Get tensor rank 2 (matrix) form data matrix.
static auto getFTensor2SymmetricFromMat(M &data)
Get symmetric tensor rank 2 (matrix) form data matrix.
int r
Definition sdf.py:205
FTensor::Index< 'm', 3 > m
auto getFTensor1DiffN(const FieldApproximationBase base)
Get derivatives of base functions.
MatrixDouble & getN(const FieldApproximationBase base)
get base functions this return matrix (nb. of rows is equal to nb. of Gauss pts, nb....
auto getFTensor0IntegrationWeight()
Get integration weights.
int nbCols
number if dof on column
boost::shared_ptr< DataAtIntegrationPts > dataAtPts
int nbIntegrationPts
number of integration points
int nbRows
number of dofs on rows
MatrixDouble K

The documentation for this struct was generated from the following file: