v0.14.0
Public Member Functions | Public Attributes | List of all members
MixTransport::MixTransportElement::OpDivTauU_HdivL2 Struct Reference

Assemble \( \int_\mathcal{T} u \textrm{div}[\boldsymbol\tau] \textrm{d}\mathcal{T} \). More...

#include <tutorials/cor-0to1/src/MixTransportElement.hpp>

Inheritance diagram for MixTransport::MixTransportElement::OpDivTauU_HdivL2:
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Collaboration diagram for MixTransport::MixTransportElement::OpDivTauU_HdivL2:
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Public Member Functions

 OpDivTauU_HdivL2 (MixTransportElement &ctx, const std::string flux_name_row, string val_name_col, Vec f)
 
MoFEMErrorCode doWork (int side, EntityType type, EntitiesFieldData::EntData &data)
 Operator for linear form, usually to calculate values on right hand side. More...
 
- Public Member Functions inherited from MoFEM::VolumeElementForcesAndSourcesCore::UserDataOperator
int getNumNodes ()
 get element number of nodes More...
 
const EntityHandlegetConn ()
 get element connectivity More...
 
double getVolume () const
 element volume (linear geometry) More...
 
doublegetVolume ()
 element volume (linear geometry) More...
 
FTensor::Tensor2< double *, 3, 3 > & getJac ()
 get element Jacobian More...
 
FTensor::Tensor2< double *, 3, 3 > & getInvJac ()
 get element inverse Jacobian More...
 
VectorDoublegetCoords ()
 nodal coordinates More...
 
VolumeElementForcesAndSourcesCoregetVolumeFE () const
 return pointer to Generic Volume Finite Element object More...
 
- Public Member Functions inherited from MoFEM::ForcesAndSourcesCore::UserDataOperator
 UserDataOperator (const FieldSpace space, const char type=OPSPACE, const bool symm=true)
 
 UserDataOperator (const std::string field_name, const char type, const bool symm=true)
 
 UserDataOperator (const std::string row_field_name, const std::string col_field_name, const char type, const bool symm=true)
 
boost::shared_ptr< const NumeredEntFiniteElementgetNumeredEntFiniteElementPtr () const
 Return raw pointer to NumeredEntFiniteElement. More...
 
EntityHandle getFEEntityHandle () const
 Return finite element entity handle. More...
 
int getFEDim () const
 Get dimension of finite element. More...
 
EntityType getFEType () const
 Get dimension of finite element. More...
 
boost::weak_ptr< SideNumbergetSideNumberPtr (const int side_number, const EntityType type)
 Get the side number pointer. More...
 
EntityHandle getSideEntity (const int side_number, const EntityType type)
 Get the side entity. More...
 
int getNumberOfNodesOnElement () const
 Get the number of nodes on finite element. More...
 
MoFEMErrorCode getProblemRowIndices (const std::string filed_name, const EntityType type, const int side, VectorInt &indices) const
 Get row indices. More...
 
MoFEMErrorCode getProblemColIndices (const std::string filed_name, const EntityType type, const int side, VectorInt &indices) const
 Get col indices. More...
 
const FEMethodgetFEMethod () const
 Return raw pointer to Finite Element Method object. More...
 
int getOpType () const
 Get operator types. More...
 
void setOpType (const OpType type)
 Set operator type. More...
 
void addOpType (const OpType type)
 Add operator type. More...
 
int getNinTheLoop () const
 get number of finite element in the loop More...
 
int getLoopSize () const
 get size of elements in the loop More...
 
std::string getFEName () const
 Get name of the element. More...
 
ForcesAndSourcesCoregetPtrFE () const
 
ForcesAndSourcesCoregetSidePtrFE () const
 
ForcesAndSourcesCoregetRefinePtrFE () const
 
const PetscData::SwitchesgetDataCtx () const
 
const KspMethod::KSPContext getKSPCtx () const
 
const SnesMethod::SNESContext getSNESCtx () const
 
const TSMethod::TSContext getTSCtx () const
 
Vec getKSPf () const
 
Mat getKSPA () const
 
Mat getKSPB () const
 
Vec getSNESf () const
 
Vec getSNESx () const
 
Mat getSNESA () const
 
Mat getSNESB () const
 
Vec getTSu () const
 
Vec getTSu_t () const
 
Vec getTSu_tt () const
 
Vec getTSf () const
 
Mat getTSA () const
 
Mat getTSB () const
 
int getTSstep () const
 
double getTStime () const
 
double getTStimeStep () const
 
double getTSa () const
 
double getTSaa () const
 
MatrixDoublegetGaussPts ()
 matrix of integration (Gauss) points for Volume Element More...
 
auto getFTensor0IntegrationWeight ()
 Get integration weights. More...
 
MatrixDoublegetCoordsAtGaussPts ()
 Gauss points and weight, matrix (nb. of points x 3) More...
 
auto getFTensor1CoordsAtGaussPts ()
 Get coordinates at integration points assuming linear geometry. More...
 
double getMeasure () const
 get measure of element More...
 
doublegetMeasure ()
 get measure of element More...
 
MoFEMErrorCode loopSide (const string &fe_name, ForcesAndSourcesCore *side_fe, const size_t dim, const EntityHandle ent_for_side=0, const int verb=QUIET, const LogManager::SeverityLevel sev=Sev::noisy, AdjCache *adj_cache=nullptr)
 User calls this function to loop over elements on the side of face. This function calls finite element with its operator to do calculations. More...
 
MoFEMErrorCode loopThis (const string &fe_name, ForcesAndSourcesCore *this_fe, const int verb=QUIET, const LogManager::SeverityLevel sev=Sev::noisy)
 User calls this function to loop over the same element using a different set of integration points. This function calls finite element with its operator to do calculations. More...
 
MoFEMErrorCode loopParent (const string &fe_name, ForcesAndSourcesCore *parent_fe, const int verb=QUIET, const LogManager::SeverityLevel sev=Sev::noisy)
 User calls this function to loop over parent elements. This function calls finite element with its operator to do calculations. More...
 
MoFEMErrorCode loopChildren (const string &fe_name, ForcesAndSourcesCore *child_fe, const int verb=QUIET, const LogManager::SeverityLevel sev=Sev::noisy)
 User calls this function to loop over parent elements. This function calls finite element with its operator to do calculations. More...
 
- Public Member Functions inherited from MoFEM::DataOperator
 DataOperator (const bool symm=true)
 
virtual ~DataOperator ()=default
 
virtual MoFEMErrorCode doWork (int row_side, int col_side, EntityType row_type, EntityType col_type, EntitiesFieldData::EntData &row_data, EntitiesFieldData::EntData &col_data)
 Operator for bi-linear form, usually to calculate values on left hand side. More...
 
virtual MoFEMErrorCode opLhs (EntitiesFieldData &row_data, EntitiesFieldData &col_data)
 
virtual MoFEMErrorCode opRhs (EntitiesFieldData &data, const bool error_if_no_base=false)
 
bool getSymm () const
 Get if operator uses symmetry of DOFs or not. More...
 
void setSymm ()
 set if operator is executed taking in account symmetry More...
 
void unSetSymm ()
 unset if operator is executed for non symmetric problem More...
 

Public Attributes

MixTransportElementcTx
 
Vec F
 
VectorDouble divVec
 
VectorDouble Nf
 
- Public Attributes inherited from MoFEM::ForcesAndSourcesCore::UserDataOperator
char opType
 
std::string rowFieldName
 
std::string colFieldName
 
FieldSpace sPace
 
- Public Attributes inherited from MoFEM::DataOperator
DoWorkLhsHookFunType doWorkLhsHook
 
DoWorkRhsHookFunType doWorkRhsHook
 
bool sYmm
 If true assume that matrix is symmetric structure. More...
 
std::array< bool, MBMAXTYPE > doEntities
 If true operator is executed for entity. More...
 
booldoVertices
 \deprectaed If false skip vertices More...
 
booldoEdges
 \deprectaed If false skip edges More...
 
booldoQuads
 \deprectaed More...
 
booldoTris
 \deprectaed More...
 
booldoTets
 \deprectaed More...
 
booldoPrisms
 \deprectaed More...
 

Additional Inherited Members

- Public Types inherited from MoFEM::ForcesAndSourcesCore::UserDataOperator
enum  OpType {
  OPROW = 1 << 0, OPCOL = 1 << 1, OPROWCOL = 1 << 2, OPSPACE = 1 << 3,
  OPLAST = 1 << 3
}
 Controls loop over entities on element. More...
 
using AdjCache = std::map< EntityHandle, std::vector< boost::weak_ptr< NumeredEntFiniteElement > >>
 
- Public Types inherited from MoFEM::DataOperator
using DoWorkLhsHookFunType = boost::function< MoFEMErrorCode(DataOperator *op_ptr, int row_side, int col_side, EntityType row_type, EntityType col_type, EntitiesFieldData::EntData &row_data, EntitiesFieldData::EntData &col_data)>
 
using DoWorkRhsHookFunType = boost::function< MoFEMErrorCode(DataOperator *op_ptr, int side, EntityType type, EntitiesFieldData::EntData &data)>
 
- Static Public Attributes inherited from MoFEM::ForcesAndSourcesCore::UserDataOperator
static const char *const OpTypeNames []
 
- Protected Member Functions inherited from MoFEM::VolumeElementForcesAndSourcesCore::UserDataOperator
MoFEMErrorCode setPtrFE (ForcesAndSourcesCore *ptr)
 
- Protected Attributes inherited from MoFEM::ForcesAndSourcesCore::UserDataOperator
ForcesAndSourcesCoreptrFE
 

Detailed Description

Assemble \( \int_\mathcal{T} u \textrm{div}[\boldsymbol\tau] \textrm{d}\mathcal{T} \).

Definition at line 870 of file MixTransportElement.hpp.

Constructor & Destructor Documentation

◆ OpDivTauU_HdivL2()

MixTransport::MixTransportElement::OpDivTauU_HdivL2::OpDivTauU_HdivL2 ( MixTransportElement ctx,
const std::string  flux_name_row,
string  val_name_col,
Vec  f 
)
inline

Definition at line 876 of file MixTransportElement.hpp.

879  flux_name_row, val_name_col, UserDataOperator::OPROW),
880  cTx(ctx), F(f) {
881  // this operator is not symmetric setting this variable makes element
882  // operator to loop over element entities (sub-simplices) without
883  // assumption that off-diagonal matrices are symmetric.
884  sYmm = false;
885  }

Member Function Documentation

◆ doWork()

MoFEMErrorCode MixTransport::MixTransportElement::OpDivTauU_HdivL2::doWork ( int  side,
EntityType  type,
EntitiesFieldData::EntData data 
)
inlinevirtual

Operator for linear form, usually to calculate values on right hand side.

Reimplemented from MoFEM::DataOperator.

Definition at line 889 of file MixTransportElement.hpp.

890  {
892  if (data.getFieldData().size() == 0)
894  int nb_row = data.getIndices().size();
895  Nf.resize(nb_row);
896  Nf.clear();
897  divVec.resize(data.getN().size2() / 3, 0);
898  if (divVec.size() != data.getIndices().size()) {
899  SETERRQ(PETSC_COMM_SELF, MOFEM_DATA_INCONSISTENCY,
900  "data inconsistency");
901  }
902  int nb_gauss_pts = data.getN().size1();
903 
905  auto t_base_diff_hdiv = data.getFTensor2DiffN<3, 3>();
906 
907  int gg = 0;
908  for (; gg < nb_gauss_pts; gg++) {
909  double w = getGaussPts()(3, gg) * getVolume();
910  for (auto &v : divVec) {
911  v = t_base_diff_hdiv(i, i);
912  ++t_base_diff_hdiv;
913  }
914  noalias(Nf) -= w * divVec * cTx.valuesAtGaussPts[gg];
915  }
916  CHKERR VecSetValues(F, nb_row, &data.getIndices()[0], &Nf[0], ADD_VALUES);
917  ;
918 
920  }

Member Data Documentation

◆ cTx

MixTransportElement& MixTransport::MixTransportElement::OpDivTauU_HdivL2::cTx

Definition at line 873 of file MixTransportElement.hpp.

◆ divVec

VectorDouble MixTransport::MixTransportElement::OpDivTauU_HdivL2::divVec

Definition at line 887 of file MixTransportElement.hpp.

◆ F

Vec MixTransport::MixTransportElement::OpDivTauU_HdivL2::F

Definition at line 874 of file MixTransportElement.hpp.

◆ Nf

VectorDouble MixTransport::MixTransportElement::OpDivTauU_HdivL2::Nf

Definition at line 887 of file MixTransportElement.hpp.


The documentation for this struct was generated from the following file:
MoFEMFunctionReturnHot
#define MoFEMFunctionReturnHot(a)
Last executable line of each PETSc function used for error handling. Replaces return()
Definition: definitions.h:460
MoFEM::EntitiesFieldData::EntData::getFieldData
const VectorDouble & getFieldData() const
get dofs values
Definition: EntitiesFieldData.hpp:1254
MoFEM::VolumeElementForcesAndSourcesCore::UserDataOperator::getVolume
double getVolume() const
element volume (linear geometry)
Definition: VolumeElementForcesAndSourcesCore.hpp:161
MoFEM::VecSetValues
MoFEMErrorCode VecSetValues(Vec V, const EntitiesFieldData::EntData &data, const double *ptr, InsertMode iora)
Assemble PETSc vector.
Definition: EntitiesFieldData.hpp:1589
MoFEM::ForcesAndSourcesCore::UserDataOperator::getGaussPts
MatrixDouble & getGaussPts()
matrix of integration (Gauss) points for Volume Element
Definition: ForcesAndSourcesCore.hpp:1236
MoFEM::EntitiesFieldData::EntData::getFTensor2DiffN
FTensor::Tensor2< FTensor::PackPtr< double *, Tensor_Dim0 *Tensor_Dim1 >, Tensor_Dim0, Tensor_Dim1 > getFTensor2DiffN(FieldApproximationBase base)
Get derivatives of base functions for Hdiv space.
Definition: EntitiesFieldData.cpp:660
MixTransport::MixTransportElement::OpDivTauU_HdivL2::cTx
MixTransportElement & cTx
Definition: MixTransportElement.hpp:873
CHKERR
#define CHKERR
Inline error check.
Definition: definitions.h:548
MixTransport::MixTransportElement::OpDivTauU_HdivL2::divVec
VectorDouble divVec
Definition: MixTransportElement.hpp:887
MoFEM::VolumeElementForcesAndSourcesCore::UserDataOperator
friend class UserDataOperator
Definition: VolumeElementForcesAndSourcesCore.hpp:105
MoFEM::EntitiesFieldData::EntData::getIndices
const VectorInt & getIndices() const
Get global indices of dofs on entity.
Definition: EntitiesFieldData.hpp:1214
i
FTensor::Index< 'i', SPACE_DIM > i
Definition: hcurl_divergence_operator_2d.cpp:27
FTensor::Index< 'i', 3 >
MixTransport::MixTransportElement::OpDivTauU_HdivL2::F
Vec F
Definition: MixTransportElement.hpp:874
v
const double v
phase velocity of light in medium (cm/ns)
Definition: initial_diffusion.cpp:40
MoFEM::EntitiesFieldData::EntData::getN
MatrixDouble & getN(const FieldApproximationBase base)
get base functions this return matrix (nb. of rows is equal to nb. of Gauss pts, nb....
Definition: EntitiesFieldData.hpp:1318
HenckyOps::f
auto f
Definition: HenckyOps.hpp:15
MOFEM_DATA_INCONSISTENCY
@ MOFEM_DATA_INCONSISTENCY
Definition: definitions.h:31
sdf_wavy_2d.w
int w
Definition: sdf_wavy_2d.py:6
MixTransport::MixTransportElement::OpDivTauU_HdivL2::Nf
VectorDouble Nf
Definition: MixTransportElement.hpp:887
MoFEM::DataOperator::sYmm
bool sYmm
If true assume that matrix is symmetric structure.
Definition: DataOperators.hpp:82
MoFEMFunctionReturn
#define MoFEMFunctionReturn(a)
Last executable line of each PETSc function used for error handling. Replaces return()
Definition: definitions.h:429
MixTransport::MixTransportElement::valuesAtGaussPts
VectorDouble valuesAtGaussPts
values at integration points on element
Definition: MixTransportElement.hpp:78
MoFEMFunctionBegin
#define MoFEMFunctionBegin
First executable line of each MoFEM function, used for error handling. Final line of MoFEM functions ...
Definition: definitions.h:359
MoFEM::ForcesAndSourcesCore::UserDataOperator::OPROW
@ OPROW
operator doWork function is executed on FE rows
Definition: ForcesAndSourcesCore.hpp:567