v0.14.0
Public Member Functions | Protected Attributes | List of all members
MoFEM::OpCopyGeomDataToE< 2 > Struct Reference

Copy geometry-related data from one element to other. More...

#include <src/finite_elements/FaceElementForcesAndSourcesCore.hpp>

Inheritance diagram for MoFEM::OpCopyGeomDataToE< 2 >:
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Collaboration diagram for MoFEM::OpCopyGeomDataToE< 2 >:
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Public Member Functions

template<typename E >
 OpCopyGeomDataToE (boost::shared_ptr< E > to_ele_ptr)
 
MoFEMErrorCode doWork (int side, EntityType type, EntitiesFieldData::EntData &data)
 Operator for linear form, usually to calculate values on right hand side. More...
 
- Public Member Functions inherited from MoFEM::FaceElementForcesAndSourcesCore::UserDataOperator
double getArea ()
 get area of face More...
 
VectorDoublegetNormal ()
 get triangle normal More...
 
VectorDoublegetTangent1 ()
 get triangle tangent 1 More...
 
VectorDoublegetTangent2 ()
 get triangle tangent 2 More...
 
auto getFTensor1Normal ()
 get normal as tensor More...
 
auto getFTensor1Tangent1 ()
 get tangentOne as tensor More...
 
auto getFTensor1Tangent2 ()
 get tangentTwo as tensor More...
 
int getNumNodes ()
 get element number of nodes More...
 
const EntityHandlegetConn ()
 get element connectivity More...
 
VectorDoublegetCoords ()
 get triangle coordinates More...
 
auto getFTensor1Coords ()
 get get coords at gauss points More...
 
MatrixDoublegetNormalsAtGaussPts ()
 if higher order geometry return normals at Gauss pts. More...
 
ublas::matrix_row< MatrixDoublegetNormalsAtGaussPts (const int gg)
 if higher order geometry return normals at Gauss pts. More...
 
MatrixDoublegetTangent1AtGaussPts ()
 if higher order geometry return tangent vector to triangle at Gauss pts. More...
 
MatrixDoublegetTangent2AtGaussPts ()
 if higher order geometry return tangent vector to triangle at Gauss pts. More...
 
auto getFTensor1NormalsAtGaussPts ()
 get normal at integration points More...
 
auto getFTensor1Tangent1AtGaussPts ()
 get tangent 1 at integration points More...
 
auto getFTensor1Tangent2AtGaussPts ()
 get tangent 2 at integration points More...
 
FaceElementForcesAndSourcesCoregetFaceFE ()
 return pointer to Generic Triangle Finite Element object More...
 
MoFEMErrorCode loopSideVolumes (const string fe_name, VolumeElementForcesAndSourcesCoreOnSide &fe_method)
 
- Public Member Functions inherited from MoFEM::ForcesAndSourcesCore::UserDataOperator
 UserDataOperator (const FieldSpace space, const char type=OPSPACE, const bool symm=true)
 
 UserDataOperator (const std::string field_name, const char type, const bool symm=true)
 
 UserDataOperator (const std::string row_field_name, const std::string col_field_name, const char type, const bool symm=true)
 
boost::shared_ptr< const NumeredEntFiniteElementgetNumeredEntFiniteElementPtr () const
 Return raw pointer to NumeredEntFiniteElement. More...
 
EntityHandle getFEEntityHandle () const
 Return finite element entity handle. More...
 
int getFEDim () const
 Get dimension of finite element. More...
 
EntityType getFEType () const
 Get dimension of finite element. More...
 
boost::weak_ptr< SideNumbergetSideNumberPtr (const int side_number, const EntityType type)
 Get the side number pointer. More...
 
EntityHandle getSideEntity (const int side_number, const EntityType type)
 Get the side entity. More...
 
int getNumberOfNodesOnElement () const
 Get the number of nodes on finite element. More...
 
MoFEMErrorCode getProblemRowIndices (const std::string filed_name, const EntityType type, const int side, VectorInt &indices) const
 Get row indices. More...
 
MoFEMErrorCode getProblemColIndices (const std::string filed_name, const EntityType type, const int side, VectorInt &indices) const
 Get col indices. More...
 
const FEMethodgetFEMethod () const
 Return raw pointer to Finite Element Method object. More...
 
int getOpType () const
 Get operator types. More...
 
void setOpType (const OpType type)
 Set operator type. More...
 
void addOpType (const OpType type)
 Add operator type. More...
 
int getNinTheLoop () const
 get number of finite element in the loop More...
 
int getLoopSize () const
 get size of elements in the loop More...
 
std::string getFEName () const
 Get name of the element. More...
 
ForcesAndSourcesCoregetPtrFE () const
 
ForcesAndSourcesCoregetSidePtrFE () const
 
ForcesAndSourcesCoregetRefinePtrFE () const
 
const PetscData::SwitchesgetDataCtx () const
 
const KspMethod::KSPContext getKSPCtx () const
 
const SnesMethod::SNESContext getSNESCtx () const
 
const TSMethod::TSContext getTSCtx () const
 
Vec getKSPf () const
 
Mat getKSPA () const
 
Mat getKSPB () const
 
Vec getSNESf () const
 
Vec getSNESx () const
 
Mat getSNESA () const
 
Mat getSNESB () const
 
Vec getTSu () const
 
Vec getTSu_t () const
 
Vec getTSu_tt () const
 
Vec getTSf () const
 
Mat getTSA () const
 
Mat getTSB () const
 
int getTSstep () const
 
double getTStime () const
 
double getTStimeStep () const
 
double getTSa () const
 
double getTSaa () const
 
MatrixDoublegetGaussPts ()
 matrix of integration (Gauss) points for Volume Element More...
 
auto getFTensor0IntegrationWeight ()
 Get integration weights. More...
 
MatrixDoublegetCoordsAtGaussPts ()
 Gauss points and weight, matrix (nb. of points x 3) More...
 
auto getFTensor1CoordsAtGaussPts ()
 Get coordinates at integration points assuming linear geometry. More...
 
double getMeasure () const
 get measure of element More...
 
doublegetMeasure ()
 get measure of element More...
 
MoFEMErrorCode loopSide (const string &fe_name, ForcesAndSourcesCore *side_fe, const size_t dim, const EntityHandle ent_for_side=0, const int verb=QUIET, const LogManager::SeverityLevel sev=Sev::noisy, AdjCache *adj_cache=nullptr)
 User calls this function to loop over elements on the side of face. This function calls finite element with its operator to do calculations. More...
 
MoFEMErrorCode loopThis (const string &fe_name, ForcesAndSourcesCore *this_fe, const int verb=QUIET, const LogManager::SeverityLevel sev=Sev::noisy)
 User calls this function to loop over the same element using a different set of integration points. This function calls finite element with its operator to do calculations. More...
 
MoFEMErrorCode loopParent (const string &fe_name, ForcesAndSourcesCore *parent_fe, const int verb=QUIET, const LogManager::SeverityLevel sev=Sev::noisy)
 User calls this function to loop over parent elements. This function calls finite element with its operator to do calculations. More...
 
MoFEMErrorCode loopChildren (const string &fe_name, ForcesAndSourcesCore *child_fe, const int verb=QUIET, const LogManager::SeverityLevel sev=Sev::noisy)
 User calls this function to loop over parent elements. This function calls finite element with its operator to do calculations. More...
 
- Public Member Functions inherited from MoFEM::DataOperator
 DataOperator (const bool symm=true)
 
virtual ~DataOperator ()=default
 
virtual MoFEMErrorCode doWork (int row_side, int col_side, EntityType row_type, EntityType col_type, EntitiesFieldData::EntData &row_data, EntitiesFieldData::EntData &col_data)
 Operator for bi-linear form, usually to calculate values on left hand side. More...
 
virtual MoFEMErrorCode opLhs (EntitiesFieldData &row_data, EntitiesFieldData &col_data)
 
virtual MoFEMErrorCode opRhs (EntitiesFieldData &data, const bool error_if_no_base=false)
 
bool getSymm () const
 Get if operator uses symmetry of DOFs or not. More...
 
void setSymm ()
 set if operator is executed taking in account symmetry More...
 
void unSetSymm ()
 unset if operator is executed for non symmetric problem More...
 

Protected Attributes

boost::shared_ptr< FaceElementForcesAndSourcesCoretoElePtr
 
- Protected Attributes inherited from MoFEM::ForcesAndSourcesCore::UserDataOperator
ForcesAndSourcesCoreptrFE
 

Additional Inherited Members

- Public Types inherited from MoFEM::ForcesAndSourcesCore::UserDataOperator
enum  OpType {
  OPROW = 1 << 0, OPCOL = 1 << 1, OPROWCOL = 1 << 2, OPSPACE = 1 << 3,
  OPLAST = 1 << 3
}
 Controls loop over entities on element. More...
 
using AdjCache = std::map< EntityHandle, std::vector< boost::weak_ptr< NumeredEntFiniteElement > >>
 
- Public Types inherited from MoFEM::DataOperator
using DoWorkLhsHookFunType = boost::function< MoFEMErrorCode(DataOperator *op_ptr, int row_side, int col_side, EntityType row_type, EntityType col_type, EntitiesFieldData::EntData &row_data, EntitiesFieldData::EntData &col_data)>
 
using DoWorkRhsHookFunType = boost::function< MoFEMErrorCode(DataOperator *op_ptr, int side, EntityType type, EntitiesFieldData::EntData &data)>
 
- Public Attributes inherited from MoFEM::ForcesAndSourcesCore::UserDataOperator
char opType
 
std::string rowFieldName
 
std::string colFieldName
 
FieldSpace sPace
 
- Public Attributes inherited from MoFEM::DataOperator
DoWorkLhsHookFunType doWorkLhsHook
 
DoWorkRhsHookFunType doWorkRhsHook
 
bool sYmm
 If true assume that matrix is symmetric structure. More...
 
std::array< bool, MBMAXTYPE > doEntities
 If true operator is executed for entity. More...
 
booldoVertices
 \deprectaed If false skip vertices More...
 
booldoEdges
 \deprectaed If false skip edges More...
 
booldoQuads
 \deprectaed More...
 
booldoTris
 \deprectaed More...
 
booldoTets
 \deprectaed More...
 
booldoPrisms
 \deprectaed More...
 
- Static Public Attributes inherited from MoFEM::ForcesAndSourcesCore::UserDataOperator
static const char *const OpTypeNames []
 

Detailed Description

Copy geometry-related data from one element to other.

That can be used to copy high order geometry data from coarse element to children. That is often a case when higher order geometry is defined only on coarse elements.

Note
Element have to share the same integration points, i.e. number of integration points has to be the same, and geometric location.

Definition at line 358 of file FaceElementForcesAndSourcesCore.hpp.

Constructor & Destructor Documentation

◆ OpCopyGeomDataToE()

template<typename E >
MoFEM::OpCopyGeomDataToE< 2 >::OpCopyGeomDataToE ( boost::shared_ptr< E to_ele_ptr)
inline

Definition at line 362 of file FaceElementForcesAndSourcesCore.hpp.

364  toElePtr(boost::dynamic_pointer_cast<FaceElementForcesAndSourcesCore>(
365  to_ele_ptr)) {}

Member Function Documentation

◆ doWork()

MoFEMErrorCode MoFEM::OpCopyGeomDataToE< 2 >::doWork ( int  side,
EntityType  type,
EntitiesFieldData::EntData data 
)
virtual

Operator for linear form, usually to calculate values on right hand side.

Reimplemented from MoFEM::DataOperator.

Definition at line 447 of file FaceElementForcesAndSourcesCore.cpp.

448  {
450 
451 #ifndef NDEBUG
452  if (toElePtr->gaussPts.size1() != getGaussPts().size1()) {
453  SETERRQ2(PETSC_COMM_SELF, MOFEM_DATA_INCONSISTENCY,
454  "Inconsistent numer of weights %d != %d",
455  toElePtr->gaussPts.size1(), getGaussPts().size1());
456  }
457  if (toElePtr->gaussPts.size2() != getGaussPts().size2()) {
458  SETERRQ2(PETSC_COMM_SELF, MOFEM_DATA_INCONSISTENCY,
459  "Inconsistent numer of integtaion pts %d != %d",
460  toElePtr->gaussPts.size2(), getGaussPts().size2());
461  }
462 #endif
463 
464  // TODO: add support for quad element types
465  switch (getFEType()) {
466  case MBTRI:
467  break;
468  default:
469  SETERRQ(PETSC_COMM_SELF, MOFEM_NOT_IMPLEMENTED,
470  "Element type not implemented");
471  }
472 
473  auto get_ftensor_from_mat_3d = [](MatrixDouble &m) {
475  &m(0, 0), &m(0, 1), &m(0, 2));
476  };
477 
478  // get local coordinates, i.e. local coordinates on child element using partent local
479  // cooridinates
480  auto get_local_coords_triangle = [&]() {
481  double ref_gauss_pts[2][3] = {{0, 1, 0}, {0, 0, 1}};
482  std::array<double, 3> ksi0 = {0, 1, 0};
483  std::array<double, 3> ksi1 = {0, 0, 1};
484  std::array<double, 9> ref_shapes;
485  CHKERR Tools::shapeFunMBTRI<1>(ref_shapes.data(), ksi0.data(), ksi1.data(),
486  3);
487  auto &node_coords = getCoords();
488  auto &glob_coords = toElePtr->coords;
489  std::array<double, 6> local_coords;
491  &*node_coords.begin(), &*glob_coords.begin(), 3, local_coords.data());
492  return local_coords;
493  };
494 
495  // get derivative of shape functions
496  auto get_diff_triangle = [&]() {
497  auto diff_ptr = Tools::diffShapeFunMBTRI.data();
499  diff_ptr, &diff_ptr[1]);
500  };
501 
502  // get jaconbian to map local coordinates of parent to child element
503  auto get_jac = [&](auto &&local_coords, auto &&t_diff) {
507  auto t_local_coords = getFTensor1FromPtr<2>(local_coords.data());
508  t_jac(I, J) = 0;
509  for (int nn = 0; nn != 3; ++nn) {
510  t_jac(I, J) += t_local_coords(I) * t_diff(J);
511  ++t_local_coords;
512  ++t_diff;
513  }
514  return t_jac;
515  };
516 
517  // get tangent vectors tensor
518  auto t_mat_tangent = [&](auto &t1, auto &t2) {
520  &t1(0), &t1(1), &t1(2), &t2(0), &t2(1), &t2(2)};
521  };
522 
523  // transform tangent vectors to child element tangents
524  auto transfrom = [&](auto &&t_mat_t, auto &&t_mat_out_t, auto &&t_inv_jac) {
530  for (auto gg = 0; gg != getGaussPts().size2(); ++gg) {
532  t_mat_out_t(J, i) = t_mat_t(I, i) * t_inv_jac(I, J);
533  ++t_mat_t;
534  ++t_mat_out_t;
535  }
536  };
537 
538  // calculate normal vector on child element
539  auto calc_normal = [&](auto &n, auto &t1, auto &t2) {
543  auto t_t1 = get_ftensor_from_mat_3d(t1);
544  auto t_t2 = get_ftensor_from_mat_3d(t2);
545  auto t_n = get_ftensor_from_mat_3d(n);
546  for (auto gg = 0; gg != getGaussPts().size2(); ++gg) {
547  t_n(j) = FTensor::levi_civita(i, j, k) * t_t1(k) * t_t2(i);
548  ++t_t1;
549  ++t_t2;
550  ++t_n;
551  }
552  };
553 
554  transfrom(
555 
556  t_mat_tangent(getTangent1AtGaussPts(), getTangent2AtGaussPts()),
557  t_mat_tangent(toElePtr->tangentOneAtGaussPts,
558  toElePtr->tangentTwoAtGaussPts),
559  get_jac(get_local_coords_triangle(), get_diff_triangle())
560 
561  );
562  calc_normal(toElePtr->normalsAtGaussPts, toElePtr->tangentOneAtGaussPts,
563  toElePtr->tangentTwoAtGaussPts);
564 
566 }

Member Data Documentation

◆ toElePtr

boost::shared_ptr<FaceElementForcesAndSourcesCore> MoFEM::OpCopyGeomDataToE< 2 >::toElePtr
protected

Definition at line 371 of file FaceElementForcesAndSourcesCore.hpp.


The documentation for this struct was generated from the following files:
NOSPACE
@ NOSPACE
Definition: definitions.h:83
FTensor::Tensor1
Definition: Tensor1_value.hpp:8
MoFEM::ForcesAndSourcesCore::UserDataOperator::OPSPACE
@ OPSPACE
operator do Work is execute on space data
Definition: ForcesAndSourcesCore.hpp:570
MoFEM::ForcesAndSourcesCore::UserDataOperator::getFEType
EntityType getFEType() const
Get dimension of finite element.
Definition: ForcesAndSourcesCore.hpp:1011
MoFEM::Types::MatrixDouble
UBlasMatrix< double > MatrixDouble
Definition: Types.hpp:77
J
FTensor::Index< 'J', DIM1 > J
Definition: level_set.cpp:30
MoFEM::OpCopyGeomDataToE< 2 >::toElePtr
boost::shared_ptr< FaceElementForcesAndSourcesCore > toElePtr
Definition: FaceElementForcesAndSourcesCore.hpp:371
FTensor::levi_civita
constexpr std::enable_if<(Dim0<=2 &&Dim1<=2), Tensor2_Expr< Levi_Civita< T >, T, Dim0, Dim1, i, j > >::type levi_civita(const Index< i, Dim0 > &, const Index< j, Dim1 > &)
levi_civita functions to make for easy adhoc use
Definition: Levi_Civita.hpp:617
FTensor::Tensor2
Definition: Tensor2_value.hpp:16
I
constexpr IntegrationType I
Definition: operators_tests.cpp:31
MoFEM::ForcesAndSourcesCore::UserDataOperator::getGaussPts
MatrixDouble & getGaussPts()
matrix of integration (Gauss) points for Volume Element
Definition: ForcesAndSourcesCore.hpp:1235
MoFEM::Tools::getLocalCoordinatesOnReferenceThreeNodeTri
static MoFEMErrorCode getLocalCoordinatesOnReferenceThreeNodeTri(const double *elem_coords, const double *glob_coords, const int nb_nodes, double *local_coords)
Get the local coordinates on reference three node tri object.
Definition: Tools.cpp:188
FTensor::Number< 0 >
CHKERR
#define CHKERR
Inline error check.
Definition: definitions.h:535
MoFEM::FaceElementForcesAndSourcesCore::UserDataOperator::getTangent2AtGaussPts
MatrixDouble & getTangent2AtGaussPts()
if higher order geometry return tangent vector to triangle at Gauss pts.
Definition: FaceElementForcesAndSourcesCore.hpp:310
MoFEM::FaceElementForcesAndSourcesCore::UserDataOperator
friend class UserDataOperator
Definition: FaceElementForcesAndSourcesCore.hpp:86
MoFEM::FaceElementForcesAndSourcesCore::UserDataOperator::getTangent1AtGaussPts
MatrixDouble & getTangent1AtGaussPts()
if higher order geometry return tangent vector to triangle at Gauss pts.
Definition: FaceElementForcesAndSourcesCore.hpp:304
get_jac
static MoFEMErrorCode get_jac(EntitiesFieldData::EntData &col_data, int gg, MatrixDouble &jac_stress, MatrixDouble &jac)
Definition: NonLinearElasticElement.cpp:731
MoFEM::Tools::diffShapeFunMBTRI
static constexpr std::array< double, 6 > diffShapeFunMBTRI
Definition: Tools.hpp:104
i
FTensor::Index< 'i', SPACE_DIM > i
Definition: hcurl_divergence_operator_2d.cpp:27
FTensor::Index
Definition: Index.hpp:23
convert.n
n
Definition: convert.py:82
j
FTensor::Index< 'j', 3 > j
Definition: matrix_function.cpp:19
MOFEM_DATA_INCONSISTENCY
@ MOFEM_DATA_INCONSISTENCY
Definition: definitions.h:31
m
FTensor::Index< 'm', 3 > m
Definition: shallow_wave.cpp:80
k
FTensor::Index< 'k', 3 > k
Definition: matrix_function.cpp:20
MoFEMFunctionReturn
#define MoFEMFunctionReturn(a)
Last executable line of each PETSc function used for error handling. Replaces return()
Definition: definitions.h:416
MOFEM_NOT_IMPLEMENTED
@ MOFEM_NOT_IMPLEMENTED
Definition: definitions.h:32
MoFEMFunctionBegin
#define MoFEMFunctionBegin
First executable line of each MoFEM function, used for error handling. Final line of MoFEM functions ...
Definition: definitions.h:346
MoFEM::FaceElementForcesAndSourcesCore::UserDataOperator::getCoords
VectorDouble & getCoords()
get triangle coordinates
Definition: FaceElementForcesAndSourcesCore.hpp:279