Tools.hpp

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/** \file Tools.hpp
 * \brief Tools interface
 *
 * Implementation of some useful and very often used methods * in MoFEM.
 *
 * \ingroup mofem_tools
 */
 
#ifndef __TOOLS_HPP__
#define __TOOLS_HPP__
 
namespace MoFEM {
 
/**
 * \brief Auxiliary tools
 * \nosubgrouping
 * \ingroup mofem_tools
 */
struct Tools : public UnknownInterface {
 
  MoFEMErrorCode query_interface(boost::typeindex::type_index type_index,
                                 UnknownInterface **iface) const;
 
  MoFEM::Core &cOre;
  Tools(const MoFEM::Core &core) : cOre(const_cast<MoFEM::Core &>(core)) {}
 
  /** \name Computational */
 
  /**
   * \brief Calculate tetrahedron volume length quality
   * @param  coords tet coordinates
   * @return        Volume-length quality
   */
  static double volumeLengthQuality(const double *coords);
 
  /**
   * @brief Calculate volume of tetrahedron
   *
   * @param coords
   * @return double volume
   */
  static double tetVolume(const double *coords);
 
  /**
   * \brief calculate minimal quality of tetrahedra in range
   * @param  tets        range
   * @param  min_quality minimal quality
   * @return             error code
   */
  MoFEMErrorCode minTetsQuality(
      const Range &tets, double &min_quality, Tag th = nullptr,
      boost::function<double(double, double)> f =
          [](double a, double b) -> double { return std::min(a, b); });
 
  static constexpr double shapeFunMBEDGE0At00 = N_MBEDGE0(0);
  static constexpr double shapeFunMBEDGE1At00 = N_MBEDGE1(0);
 
  /**
   * @brief Array of shape function at zero local point on reference element
   *
   */
  static constexpr std::array<double, 2> shapeFunMBEDGEAt00 = {
      shapeFunMBEDGE0At00, shapeFunMBEDGE1At00};
 
  static constexpr double diffN_MBEDGE0x = diffN_MBEDGE0;
  static constexpr double diffN_MBEDGE1x = diffN_MBEDGE1;
 
  static constexpr std::array<double, 2> diffShapeFunMBEDGE = {diffN_MBEDGE0x,
                                                               diffN_MBEDGE1x};
 
  static inline double shapeFunMBEDGE0(const double x);
 
  static inline double shapeFunMBEDGE1(const double x);
 
  /**
   * @brief Calculate shape functions on edge
   *
   * \note Template parameter is leading dimension of point coordinate arrays,
   * such that \f$ksi_{n+1} = ksi[n + LDB]\f$
   *
   * @tparam 1
   * @param shape shape functions
   * @param ksi pointer to first local coordinates
   * @param nb number of points
   * @return MoFEMErrorCode
   */
  template <int LDB = 1>
  static MoFEMErrorCode shapeFunMBEDGE(double *shape, const double *ksi,
                                       const int nb);
 
  static constexpr double diffShapeFunMBTRI0x =
      diffN_MBTRI0x; ///< derivative of triangle shape function
  static constexpr double diffShapeFunMBTRI0y =
      diffN_MBTRI0y; ///< derivative of triangle shape function
  static constexpr double diffShapeFunMBTRI1x =
      diffN_MBTRI1x; ///< derivative of triangle shape function
  static constexpr double diffShapeFunMBTRI1y =
      diffN_MBTRI1y; ///< derivative of triangle shape function
  static constexpr double diffShapeFunMBTRI2x =
      diffN_MBTRI2x; ///< derivative of triangle shape function
  static constexpr double diffShapeFunMBTRI2y =
      diffN_MBTRI2y; ///< derivative of triangle shape function
 
  static constexpr std::array<double, 6> diffShapeFunMBTRI = {
 
      diffShapeFunMBTRI0x, diffShapeFunMBTRI0y,
 
      diffShapeFunMBTRI1x, diffShapeFunMBTRI1y,
 
      diffShapeFunMBTRI2x, diffShapeFunMBTRI2y};
 
  static constexpr double shapeFunMBTRI0At00 = N_MBTRI0(0, 0);
  static constexpr double shapeFunMBTRI1At00 = N_MBTRI1(0, 0);
  static constexpr double shapeFunMBTRI2At00 = N_MBTRI2(0, 0);
 
  /**
   * @brief Array of shape function at zero local point on reference element
   *
   */
  static constexpr std::array<double, 3> shapeFunMBTRIAt00 = {
      shapeFunMBTRI0At00, shapeFunMBTRI1At00, shapeFunMBTRI2At00};
 
  static inline double shapeFunMBTRI0(const double x, const double y);
 
  static inline double shapeFunMBTRI1(const double x, const double y);
 
  static inline double shapeFunMBTRI2(const double x, const double y);
 
  /**
   * @brief Calculate shape functions on triangle
   *
   * \note Template parameter is leading dimension of point coordinate arrays,
   * such that \f$ksi_{n+1} = ksi[n + LDB]\f$
   *
   * @tparam 1
   * @param shape shape functions
   * @param ksi pointer to first local coordinates
   * @param eta pointer to second local coordinates
   * @param nb number of points
   * @return MoFEMErrorCode
   */
  template <int LDB = 1>
  static MoFEMErrorCode shapeFunMBTRI(double *shape, const double *ksi,
                                      const double *eta, const int nb);
 
  static constexpr double diffShapeFunMBQUADAtCenter0x =
      diffN_MBQUAD0x(0.5); ///< derivative of quad shape function
  static constexpr double diffShapeFunMBQUADAtCenter0y =
      diffN_MBQUAD0y(0.5); ///< derivative of quad shape function
  static constexpr double diffShapeFunMBQUADAtCenter1x =
      diffN_MBQUAD1x(0.5); ///< derivative of quad shape function
  static constexpr double diffShapeFunMBQUADAtCenter1y =
      diffN_MBQUAD1y(0.5); ///< derivative of quad shape function
  static constexpr double diffShapeFunMBQUADAtCenter2x =
      diffN_MBQUAD2x(0.5); ///< derivative of quad shape function
  static constexpr double diffShapeFunMBQUADAtCenter2y =
      diffN_MBQUAD2y(0.5); ///< derivative of quad shape function
  static constexpr double diffShapeFunMBQUADAtCenter3x =
      diffN_MBQUAD3x(0.5); ///< derivative of quad shape function
  static constexpr double diffShapeFunMBQUADAtCenter3y =
      diffN_MBQUAD3y(0.5); ///< derivative of quad shape function
 
  static constexpr double diffShapeFunMBHEXAtCenter0x =
      diffN_MBHEX0x(0.5, 0.5); ///< derivative of HEX shape function
  static constexpr double diffShapeFunMBHEXAtCenter0y =
      diffN_MBHEX0y(0.5, 0.5); ///< derivative of HEX shape function
  static constexpr double diffShapeFunMBHEXAtCenter0z =
      diffN_MBHEX0z(0.5, 0.5); ///< derivative of HEX shape function
  static constexpr double diffShapeFunMBHEXAtCenter1x =
      diffN_MBHEX1x(0.5, 0.5); ///< derivative of HEX shape function
  static constexpr double diffShapeFunMBHEXAtCenter1y =
      diffN_MBHEX1y(0.5, 0.5); ///< derivative of HEX shape function
  static constexpr double diffShapeFunMBHEXAtCenter1z =
      diffN_MBHEX1z(0.5, 0.5); ///< derivative of HEX shape function
  static constexpr double diffShapeFunMBHEXAtCenter2x =
      diffN_MBHEX2x(0.5, 0.5); ///< derivative of HEX shape function
  static constexpr double diffShapeFunMBHEXAtCenter2y =
      diffN_MBHEX2y(0.5, 0.5); ///< derivative of HEX shape function
  static constexpr double diffShapeFunMBHEXAtCenter2z =
      diffN_MBHEX2z(0.5, 0.5); ///< derivative of HEX shape function
  static constexpr double diffShapeFunMBHEXAtCenter3x =
      diffN_MBHEX3x(0.5, 0.5); ///< derivative of HEX shape function
  static constexpr double diffShapeFunMBHEXAtCenter3y =
      diffN_MBHEX3y(0.5, 0.5); ///< derivative of quad shape function
  static constexpr double diffShapeFunMBHEXAtCenter3z =
      diffN_MBHEX3z(0.5, 0.5); ///< derivative of quad shape function
  static constexpr double diffShapeFunMBHEXAtCenter4x =
      diffN_MBHEX4x(0.5, 0.5); ///< derivative of HEX shape function
  static constexpr double diffShapeFunMBHEXAtCenter4y =
      diffN_MBHEX4y(0.5, 0.5); ///< derivative of quad shape function
  static constexpr double diffShapeFunMBHEXAtCenter4z =
      diffN_MBHEX4z(0.5, 0.5); ///< derivative of quad shape function
  static constexpr double diffShapeFunMBHEXAtCenter5x =
      diffN_MBHEX5x(0.5, 0.5); ///< derivative of HEX shape function
  static constexpr double diffShapeFunMBHEXAtCenter5y =
      diffN_MBHEX5y(0.5, 0.5); ///< derivative of quad shape function
  static constexpr double diffShapeFunMBHEXAtCenter5z =
      diffN_MBHEX5z(0.5, 0.5); ///< derivative of quad shape function
  static constexpr double diffShapeFunMBHEXAtCenter6x =
      diffN_MBHEX6x(0.5, 0.5); ///< derivative of HEX shape function
  static constexpr double diffShapeFunMBHEXAtCenter6y =
      diffN_MBHEX6y(0.5, 0.5); ///< derivative of quad shape function
  static constexpr double diffShapeFunMBHEXAtCenter6z =
      diffN_MBHEX6z(0.5, 0.5); ///< derivative of quad shape function
  static constexpr double diffShapeFunMBHEXAtCenter7x =
      diffN_MBHEX7x(0.5, 0.5); ///< derivative of HEX shape function
  static constexpr double diffShapeFunMBHEXAtCenter7y =
      diffN_MBHEX7y(0.5, 0.5); ///< derivative of quad shape function
  static constexpr double diffShapeFunMBHEXAtCenter7z =
      diffN_MBHEX7z(0.5, 0.5); ///< derivative of quad shape function
 
  static constexpr std::array<double, 8> diffShapeFunMBQUADAtCenter = {
      diffShapeFunMBQUADAtCenter0x, diffShapeFunMBQUADAtCenter0y,
      diffShapeFunMBQUADAtCenter1x, diffShapeFunMBQUADAtCenter1y,
      diffShapeFunMBQUADAtCenter2x, diffShapeFunMBQUADAtCenter2y,
      diffShapeFunMBQUADAtCenter3x, diffShapeFunMBQUADAtCenter3y};
 
  static constexpr std::array<double, 24> diffShapeFunMBHEXAtCenter = {
 
      diffShapeFunMBHEXAtCenter0x, diffShapeFunMBHEXAtCenter0y,
      diffShapeFunMBHEXAtCenter0z,
 
      diffShapeFunMBHEXAtCenter1x, diffShapeFunMBHEXAtCenter1y,
      diffShapeFunMBHEXAtCenter1z,
 
      diffShapeFunMBHEXAtCenter2x, diffShapeFunMBHEXAtCenter2y,
      diffShapeFunMBHEXAtCenter2z,
 
      diffShapeFunMBHEXAtCenter3x, diffShapeFunMBHEXAtCenter3y,
      diffShapeFunMBHEXAtCenter3z,
 
      diffShapeFunMBHEXAtCenter4x, diffShapeFunMBHEXAtCenter4y,
      diffShapeFunMBHEXAtCenter4z,
 
      diffShapeFunMBHEXAtCenter5x, diffShapeFunMBHEXAtCenter5y,
      diffShapeFunMBHEXAtCenter5z,
 
      diffShapeFunMBHEXAtCenter6x, diffShapeFunMBHEXAtCenter6y,
      diffShapeFunMBHEXAtCenter6z,
 
      diffShapeFunMBHEXAtCenter7x, diffShapeFunMBHEXAtCenter7y,
      diffShapeFunMBHEXAtCenter7z
 
  };
 
  static constexpr double diffShapeFunMBTET0x =
      diffN_MBTET0x; ///< derivative of tetrahedral shape function
  static constexpr double diffShapeFunMBTET0y =
      diffN_MBTET0y; ///< derivative of tetrahedral shape function
  static constexpr double diffShapeFunMBTET0z =
      diffN_MBTET0z; ///< derivative of tetrahedral shape function
  static constexpr double diffShapeFunMBTET1x =
      diffN_MBTET1x; ///< derivative of tetrahedral shape function
  static constexpr double diffShapeFunMBTET1y =
      diffN_MBTET1y; ///< derivative of tetrahedral shape function
  static constexpr double diffShapeFunMBTET1z =
      diffN_MBTET1z; ///< derivative of tetrahedral shape function
  static constexpr double diffShapeFunMBTET2x =
      diffN_MBTET2x; ///< derivative of tetrahedral shape function
  static constexpr double diffShapeFunMBTET2y =
      diffN_MBTET2y; ///< derivative of tetrahedral shape function
  static constexpr double diffShapeFunMBTET2z =
      diffN_MBTET2z; ///< derivative of tetrahedral shape function
  static constexpr double diffShapeFunMBTET3x =
      diffN_MBTET3x; ///< derivative of tetrahedral shape function
  static constexpr double diffShapeFunMBTET3y =
      diffN_MBTET3y; ///< derivative of tetrahedral shape function
  static constexpr double diffShapeFunMBTET3z =
      diffN_MBTET3z; ///< derivative of tetrahedral shape function
 
  static constexpr std::array<double, 12> diffShapeFunMBTET = {
 
      diffShapeFunMBTET0x, diffShapeFunMBTET0y, diffShapeFunMBTET0z,
 
      diffShapeFunMBTET1x, diffShapeFunMBTET1y, diffShapeFunMBTET1z,
 
      diffShapeFunMBTET2x, diffShapeFunMBTET2y, diffShapeFunMBTET2z,
 
      diffShapeFunMBTET3x, diffShapeFunMBTET3y, diffShapeFunMBTET3z};
 
  static inline double shapeFunMBTET0(const double x, const double y,
                                      const double z);
 
  static inline double shapeFunMBTET1(const double x, const double y,
                                      const double z);
 
  static inline double shapeFunMBTET2(const double x, const double y,
                                      const double z);
 
  static inline double shapeFunMBTET3(const double x, const double y,
                                      const double z);
 
  static constexpr double shapeFunMBTET0At000 = N_MBTET0(0, 0, 0);
  static constexpr double shapeFunMBTET1At000 = N_MBTET1(0, 0, 0);
  static constexpr double shapeFunMBTET2At000 = N_MBTET2(0, 0, 0);
  static constexpr double shapeFunMBTET3At000 = N_MBTET3(0, 0, 0);
 
  static constexpr double shapeFunMBTET0AtOneThird =
      N_MBTET0(1. / 3., 1. / 3., 1. / 3.);
  static constexpr double shapeFunMBTET1AtOneThird =
      N_MBTET1(1. / 3., 1. / 3., 1. / 3.);
  static constexpr double shapeFunMBTET2AtOneThird =
      N_MBTET2(1. / 3., 1. / 3., 1. / 3.);
  static constexpr double shapeFunMBTET3AtOneThird =
      N_MBTET3(1. / 3., 1. / 3., 1. / 3.);
 
  /**
   * @brief Calculate shape functions on tetrahedron
   *
   * \note Template parameter is leading dimension of point coordinate arrays,
   * such that \f$ksi_{n+1} = ksi[n + LDB]\f$
   *
   * @tparam 1
   * @param shape shape functions
   * @param ksi pointer to first local coordinates
   * @param eta pointer to second local coordinates
   * @param zeta pointer to first third coordinates
   * @param nb number of points
   * @return MoFEMErrorCode
   */
  template <int LDB = 1>
  static MoFEMErrorCode shapeFunMBTET(double *shape, const double *ksi,
                                      const double *eta, const double *zeta,
                                      const double nb);
 
  /**
   * @brief Array of shape function at zero local point on reference element
   *
   */
  static constexpr std::array<double, 4> shapeFunMBTETAt000 = {
      shapeFunMBTET0At000, shapeFunMBTET1At000, shapeFunMBTET2At000,
      shapeFunMBTET3At000};
 
  /**
   * @brief Array of shape function at center on reference element
   *
   */
  static constexpr std::array<double, 4> shapeFunMBTETAtOneThird = {
      shapeFunMBTET0AtOneThird, shapeFunMBTET1AtOneThird,
      shapeFunMBTET2AtOneThird, shapeFunMBTET3AtOneThird};
 
  /**
   * @brief Get the local coordinates on reference four node tet object
   *
   * \code
   * MatrixDouble elem_coords(4, 3);
   * // Set nodal coordinates
   * MatrixDouble global_coords(5, 3);
   * // Set global coordinates
   * MatrixDouble local_coords(global_coords.size1(), 3);
   * CHKERR Tools::getLocalCoordinatesOnReferenceFourNodeTet(
   *     &elem_coords(0, 0), &global_coords(0, 0), global_coords.size1(),
   *     &local_coords(0, 0))
   * \endcode
   *
   * @param elem_coords Global element node coordinates
   * @param glob_coords Global coordinates
   * @param nb_nodes Number of points
   * @param local_coords Result
   * @return MoFEMErrorCode
   */
  static MoFEMErrorCode getLocalCoordinatesOnReferenceFourNodeTet(
      const double *elem_coords, const double *glob_coords, const int nb_nodes,
      double *local_coords);
 
  /**
   * @brief Get the local coordinates on reference three node tri object
   *
   * \code
   * MatrixDouble elem_coords(4, 3);
   * // Set nodal coordinates
   * MatrixDouble global_coords(5, 3);
   * // Set global coordinates
   * MatrixDouble local_coords(global_coords.size1(), 3);
   * CHKERR Tools::getLocalCoordinatesOnReferenceFourNodeTet(
   *     &elem_coords(0, 0), &global_coords(0, 0), global_coords.size1(),
   *     &local_coords(0, 0))
   * \endcode
   *
   * @param elem_coords Global element node coordinates
   * @param glob_coords Global coordinates
   * @param nb_nodes Number of points
   * @param local_coords Result
   * @param d_elem_coords Derivative of local coordinates 
   * @param d_global_coords
   * @return MoFEMErrorCode
   */
  static MoFEMErrorCode getLocalCoordinatesOnReferenceThreeNodeTri(
      const double *elem_coords, const double *glob_coords, const int nb_nodes,
      double *local_coords);
 
  /** @copydoc getLocalCoordinatesOnReferenceThreeNodeTri */
  static MoFEMErrorCode getLocalCoordinatesOnReferenceThreeNodeTri(
      const double *elem_coords, const std::complex<double> *glob_coords,
      const int nb_nodes, std::complex<double> *local_coords);
 
/** @deprecated use getLocalCoordinatesOnReferenceThreeNodeTri */
  DEPRECATED static MoFEMErrorCode getLocalCoordinatesOnReferenceTriNodeTri(
      const double *elem_coords, const double *glob_coords, const int nb_nodes,
      double *local_coords) {
    return getLocalCoordinatesOnReferenceThreeNodeTri(elem_coords, glob_coords,
                                                      nb_nodes, local_coords);
  }
 
  /**
   * @brief Get the local coordinates on reference four node tet object
   *
   * \code
   * MatrixDouble elem_coords(4, 3);
   * // Set nodal coordinates
   * MatrixDouble global_coords(5, 3);
   * // Set global coordinates
   * MatrixDouble local_coords(global_coords.size1(), 3);
   * CHKERR Tools::getLocalCoordinatesOnReferenceEdgeNodeEdge(
   *     &elem_coords(0, 0), &global_coords(0, 0), global_coords.size1(),
   *     &local_coords(0, 0))
   * \endcode
   *
   * @param elem_coords Global element node coordinates
   * @param glob_coords Global coordinates
   * @param nb_nodes Number of points
   * @param local_coords Result
   * @return MoFEMErrorCode
   */
  static MoFEMErrorCode getLocalCoordinatesOnReferenceEdgeNodeEdge(
      const double *elem_coords, const double *glob_coords, const int nb_nodes,
      double *local_coords);
 
  /**
   * @brief Get the Tets With Quality
   *
   * @param out_tets
   * @param tets
   * @param th
   * @param f
   * @return MoFEMErrorCode
   */
  MoFEMErrorCode getTetsWithQuality(
      Range &out_tets, const Range &tets, Tag th = nullptr,
      boost::function<bool(double)> f = [](double q) -> bool {
        if (q <= 0)
          return true;
        else
          return false;
      });
  /**
   * @brief Write file with tetrahedral of given quality
   *
   * @param file_name
   * @param file_type
   * @param options
   * @param tets
   * @param th
   * @param f
   * @return MoFEMErrorCode
   */
  MoFEMErrorCode writeTetsWithQuality(
      const char *file_name, const char *file_type, const char *options,
      const Range &tets, Tag th = nullptr,
      boost::function<bool(double)> f = [](double q) -> bool {
        if (q <= 0)
          return true;
        else
          return false;
      });
 
  /**
   * @brief Check of point is in tetrahedral
   *
   * @param tet_coords
   * @param global_coord
   * @param tol
   * @param result
   * @return MoFEMErrorCode
   */
  static MoFEMErrorCode checkIfPointIsInTet(const double tet_coords[],
                                            const double global_coord[],
                                            const double tol, bool &result);
 
  /**
   * @brief Get the Tri Normal objectGet triangle normal
   *
   * @param coords
   * @param normal
   * @param d_normal derbiative, if pointer is null, derbiative is not
   * calculated
   * @return MoFEMErrorCode
   */
  static MoFEMErrorCode getTriNormal(const double *coords, double *normal,
                                     double *d_normal = nullptr);
 
  /**
   * @brief Get triangle normal
   *
   * @param tri
   * @param normal
   * @return MoFEMErrorCode
   */
  MoFEMErrorCode getTriNormal(const EntityHandle tri, double *normal) const;
 
  /**
   * @brief Get triangle area
   *
   * @param tri
   * @return double
   */
  double getTriArea(const EntityHandle tri) const;
 
  /**
   * @brief Get edge length
   *
   * @param edge_coords
   * @return double
   */
  static double getEdgeLength(const double *edge_coords);
 
  /**
   * @brief Get edge length
   *
   * @param edge
   * @return double
   */
  double getEdgeLength(const EntityHandle edge);
 
  enum SEGMENT_MIN_DISTANCE {
    SOLUTION_EXIST,
    SEGMENT_ONE_IS_POINT,
    SEGMENT_TWO_IS_POINT,
    SEGMENT_TWO_AND_TWO_ARE_POINT,
    NO_SOLUTION
  };
 
  /**
   * @brief Find closet point on the segment from the point
   *
   * @param w_ptr segment first vertex coordinate
   * @param v_ptr segment second vertex coordinate
   * @param p_ptr coordinate of point
   * @param t_ptr distance on the segment
   *
   * \note If t is outside bounds [ 0,-1 ] point is on the line point
   * beyond segment.
   *
   * \code
   *
   * double w[] = {-1, 0, 0};
   * double v[] = {1, 0, 0};
   * double p[] = {0, 1, 0};
   * double t;
   * CHKERR Toolas::minDistancePointFromOnSegment(w, v, p, &t);
   * double point_on_segment[3];
   * for (int i = 0; i != 3; ++i)
   *   point_on_segment[i] = w[i] + t * (v[i] - w[i]);
   *
   * \endcode
   *
   * @return SEGMENT_MIN_DISTANCE
   */
  static SEGMENT_MIN_DISTANCE
  minDistancePointFromOnSegment(const double *w_ptr, const double *v_ptr,
                                const double *p_ptr,
                                double *const t_ptr = nullptr);
  /**
   * @brief Find points on two segments in closest distance
   *
   * @param w_ptr
   * @param v_ptr
   * @param k_ptr
   * @param l_ptr
   * @param tvw_ptr
   * @param tlk_ptr
   * @return SEGMENT_MIN_DISTANCE
   *
   * \note If tvwk or tlk are outside bound [0,-1], it means that points
   * are on the lines beyond segments, respectively for segment vw and
   * lk.
   *
   */
  static SEGMENT_MIN_DISTANCE
  minDistanceFromSegments(const double *w_ptr, const double *v_ptr,
                          const double *k_ptr, const double *l_ptr,
                          double *const tvw_ptr = nullptr,
                          double *const tlk_ptr = nullptr);
 
  /**
   * @brief Find minimal distance to edges
   *
   * \note Finding only edges with have smaller distance than distance
   * set on the input by min_dist_ptr
   *
   * @param v_ptr point coordinates
   * @param nb nb points
   * @param edges range of edges
   * @param min_dist_ptr on return minimal distance, on input starting
   * distance
   * @param o_ptr coordinates of the point on edge
   * @param o_segments closest segments
   * @return MoFEMErrorCode
   */
  MoFEMErrorCode
  findMinDistanceFromTheEdges(const double *v_ptr, const int nb, Range edges,
                              double *min_dist_ptr, double *o_ptr = nullptr,
                              EntityHandle *o_segments = nullptr) const;
 
  /** \name Debugging */
 
  /**@{*/
 
  /** \brief Print all DOFs for which element of vector is not a number
   *
   */
  MoFEMErrorCode checkVectorForNotANumber(const Problem *prb_ptr,
                                          const RowColData row_or_col, Vec v);
 
  /**@}*/
 
  static MoFEMErrorCode
  outerProductOfEdgeIntegrationPtsForQuad(MatrixDouble &pts, const int edge0,
                                          const int edge1);
 
  static MoFEMErrorCode
  outerProductOfEdgeIntegrationPtsForHex(MatrixDouble &pts, const int edge0,
                                         const int edge1, const int edge2);
 
  /** \name Mesh refinement */
 
  /**@{*/
 
  static constexpr std::array<int, 12> uniformTriangleRefineTriangles = {
 
      0, 3, 5, // 0
      3, 1, 4, // 1
      5, 4, 2, // 2
      5, 3, 4  // 3
 
  };
 
  using RefineTrianglesReturn =
      std::tuple<std::vector<double>, std::vector<int>, std::vector<int>>;
 
  /**
   * @brief create uniform triangle mesh of refined elements
   * 
   * @param nb_levels 
   * @return RefineTrianglesReturn 
   */
  static RefineTrianglesReturn refineTriangle(int nb_levels);
 
  /**
   * @brief generate integration points for refined triangle mesh for last level
   * 
   * @param pts 
   * @param refined 
   * @return MatrixDouble 
   */
  static MatrixDouble
  refineTriangleIntegrationPts(MatrixDouble pts, RefineTrianglesReturn refined);
 
  /**
   * @brief generate integration points for refined triangle mesh for last level
   * 
   * @param rule Gauss integration rule
   * @param refined 
   * @return MatrixDouble 
   */
  static MatrixDouble
  refineTriangleIntegrationPts(int rule, RefineTrianglesReturn refined);
 
  /**@}*/
 
};
 
double Tools::shapeFunMBEDGE0(const double x) {
  return N_MBEDGE0(x);
}
 
double Tools::shapeFunMBEDGE1(const double x) {
  return N_MBEDGE1(x);
}
 
template <int LDB>
MoFEMErrorCode Tools::shapeFunMBEDGE(double *shape, const double *ksi,
                                     const int nb) {
  MoFEMFunctionBeginHot;
  for (int n = 0; n != nb; ++n) {
    shape[0] = shapeFunMBEDGE0(*ksi);
    shape[1] = shapeFunMBEDGE1(*ksi);
    shape += 2;
    ksi += LDB;
  }
  MoFEMFunctionReturnHot(0);
}
 
double Tools::shapeFunMBTRI0(const double x, const double y) {
  return N_MBTRI0(x, y);
}
 
double Tools::shapeFunMBTRI1(const double x, const double y) {
  return N_MBTRI1(x, y);
}
 
double Tools::shapeFunMBTRI2(const double x, const double y) {
  return N_MBTRI2(x, y);
}
 
template <int LDB>
MoFEMErrorCode Tools::shapeFunMBTRI(double *shape, const double *ksi,
                                    const double *eta, const int nb) {
  MoFEMFunctionBeginHot;
  for (int n = 0; n != nb; ++n) {
    shape[0] = shapeFunMBTRI0(*ksi, *eta);
    shape[1] = shapeFunMBTRI1(*ksi, *eta);
    shape[2] = shapeFunMBTRI2(*ksi, *eta);
    shape += 3;
    ksi += LDB;
    eta += LDB;
  }
  MoFEMFunctionReturnHot(0);
}
 
double Tools::shapeFunMBTET0(const double x, const double y, const double z) {
  return N_MBTET0(x, y, z);
}
 
double Tools::shapeFunMBTET1(const double x, const double y, const double z) {
  return N_MBTET1(x, y, z);
}
 
double Tools::shapeFunMBTET2(const double x, const double y, const double z) {
  return N_MBTET2(x, y, z);
}
 
double Tools::shapeFunMBTET3(const double x, const double y, const double z) {
  return N_MBTET3(x, y, z);
};
 
template <int LDB>
MoFEMErrorCode Tools::shapeFunMBTET(double *shape, const double *ksi,
                                    const double *eta, const double *zeta,
                                    const double nb) {
  MoFEMFunctionBeginHot;
  for (int n = 0; n != nb; ++n) {
    shape[0] = shapeFunMBTET0(*ksi, *eta, *zeta);
    shape[1] = shapeFunMBTET1(*ksi, *eta, *zeta);
    shape[2] = shapeFunMBTET2(*ksi, *eta, *zeta);
    shape[3] = shapeFunMBTET3(*ksi, *eta, *zeta);
    shape += 4;
    ksi += LDB;
    eta += LDB;
    zeta += LDB;
  }
  MoFEMFunctionReturnHot(0);
}
 
 
} // namespace MoFEM
 
#endif // __TOOLS_HPP__a
 
/**
 * \defgroup mofem_tools Tools interface
 * \brief Interface for tools
 *
 * \ingroup mofem
 */