v0.14.0
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PostProcFatPrismOnRefinedMesh Struct Reference

Postprocess on prism. More...

#include <users_modules/basic_finite_elements/src/PostProcOnRefMesh.hpp>

Inheritance diagram for PostProcFatPrismOnRefinedMesh:
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Collaboration diagram for PostProcFatPrismOnRefinedMesh:
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Classes

struct  CommonData
 
struct  PointsMap3D
 

Public Types

typedef multi_index_container< PointsMap3D, indexed_by< ordered_unique< composite_key< PointsMap3D, member< PointsMap3D, const int, &PointsMap3D::kSi >, member< PointsMap3D, const int, &PointsMap3D::eTa >, member< PointsMap3D, const int, &PointsMap3D::zEta > > > > > PointsMap3D_multiIndex
 
- Public Types inherited from MoFEM::VolumeElementForcesAndSourcesCore
enum  Switches
 
- Public Types inherited from MoFEM::ForcesAndSourcesCore
typedef boost::function< int(int order_row, int order_col, int order_data)> RuleHookFun
 
typedef boost::function< MoFEMErrorCode(ForcesAndSourcesCore *fe_raw_ptr, int order_row, int order_col, int order_data)> GaussHookFun
 
- Public Types inherited from MoFEM::KspMethod
enum  KSPContext { CTX_SETFUNCTION, CTX_OPERATORS, CTX_KSPNONE }
 pass information about context of KSP/DM for with finite element is computed More...
 
- Public Types inherited from MoFEM::PetscData
enum  DataContext {
  CTX_SET_NONE = 0, CTX_SET_F = 1 << 0, CTX_SET_A = 1 << 1, CTX_SET_B = 1 << 2,
  CTX_SET_X = 1 << 3, CTX_SET_X_T = 1 << 4, CTX_SET_X_TT = 1 << 6, CTX_SET_TIME = 1 << 7
}
 
using Switches = std::bitset< 8 >
 
- Public Types inherited from MoFEM::SnesMethod
enum  SNESContext { CTX_SNESSETFUNCTION, CTX_SNESSETJACOBIAN, CTX_SNESNONE }
 
- Public Types inherited from MoFEM::TSMethod
enum  TSContext {
  CTX_TSSETRHSFUNCTION, CTX_TSSETRHSJACOBIAN, CTX_TSSETIFUNCTION, CTX_TSSETIJACOBIAN,
  CTX_TSTSMONITORSET, CTX_TSNONE
}
 

Public Member Functions

 PostProcFatPrismOnRefinedMesh (MoFEM::Interface &m_field, bool ten_nodes_post_proc_tets=true)
 
int getRuleTrianglesOnly (int order)
 
int getRuleThroughThickness (int order)
 
MoFEMErrorCode setGaussPtsTrianglesOnly (int order_triangles_only)
 
MoFEMErrorCode setGaussPtsThroughThickness (int order_thickness)
 
MoFEMErrorCode generateReferenceElementMesh ()
 
MoFEMErrorCode preProcess ()
 function is run at the beginning of loop More...
 
MoFEMErrorCode postProcess ()
 function is run at the end of loop More...
 
virtual PostProcCommonOnRefMesh::CommonDatagetCommonData ()
 
- Public Member Functions inherited from PostProcTemplateOnRefineMesh< MoFEM::FatPrismElementForcesAndSourcesCore >
 PostProcTemplateOnRefineMesh (MoFEM::Interface &m_field)
 
virtual ~PostProcTemplateOnRefineMesh ()
 
MoFEMErrorCode addFieldValuesPostProc (const std::string field_name, Vec v=PETSC_NULL)
 Add operator to post-process L2, H1, Hdiv, Hcurl field value. More...
 
MoFEMErrorCode addFieldValuesPostProc (const std::string field_name, const std::string tag_name, Vec v=PETSC_NULL)
 Add operator to post-process L2 or H1 field value. More...
 
MoFEMErrorCode addFieldValuesGradientPostProc (const std::string field_name, Vec v=PETSC_NULL)
 Add operator to post-process L2 or H1 field gradient. More...
 
MoFEMErrorCode addFieldValuesGradientPostProc (const std::string field_name, const std::string tag_name, Vec v=PETSC_NULL)
 Add operator to post-process L2 or H1 field gradient. More...
 
MoFEMErrorCode addFieldValuesGradientPostProc (const std::string field_name, int space_dim, Vec v=PETSC_NULL)
 Add operator to post-process L2 or H1 field gradient. More...
 
MoFEMErrorCode writeFile (const std::string file_name, const char *file_type="MOAB", const char *file_options="PARALLEL=WRITE_PART")
 wrote results in (MOAB) format, use "file_name.h5m" More...
 
- Public Member Functions inherited from MoFEM::FatPrismElementForcesAndSourcesCore
 FatPrismElementForcesAndSourcesCore (Interface &m_field)
 
MoFEMErrorCode operator() ()
 function is run for every finite element More...
 
- Public Member Functions inherited from MoFEM::VolumeElementForcesAndSourcesCore
 VolumeElementForcesAndSourcesCore (Interface &m_field, const EntityType type=MBTET)
 
MoFEMErrorCode operator() ()
 function is run for every finite element More...
 
- Public Member Functions inherited from MoFEM::ForcesAndSourcesCore
 ForcesAndSourcesCore (Interface &m_field)
 
boost::ptr_deque< UserDataOperator > & getOpPtrVector ()
 Use to push back operator for row operator. More...
 
auto & getElementPolynomialBase ()
 Get the Entity Polynomial Base object. More...
 
auto & getUserPolynomialBase ()
 Get the User Polynomial Base object. More...
 
int getMaxDataOrder () const
 Get max order of approximation for data fields. More...
 
int getMaxRowOrder () const
 Get max order of approximation for field in rows. More...
 
int getMaxColOrder () const
 Get max order of approximation for field in columns. More...
 
auto & getEntData (const FieldSpace space, const EntityType type, const int side)
 Get the entity data. More...
 
auto & getDataOnElementBySpaceArray ()
 Get data on entities and space. More...
 
auto & getDerivedDataOnElementBySpaceArray ()
 Get derived data on entities and space. More...
 
- Public Member Functions inherited from MoFEM::FEMethod
MoFEMErrorCode query_interface (boost::typeindex::type_index type_index, UnknownInterface **iface) const
 
 FEMethod ()=default
 
auto getFEName () const
 get finite element name More...
 
auto getDataDofsPtr () const
 
auto getDataVectorDofsPtr () const
 
const FieldEntity_vector_viewgetDataFieldEnts () const
 
boost::shared_ptr< FieldEntity_vector_view > & getDataFieldEntsPtr () const
 
auto & getRowFieldEnts () const
 
auto & getRowFieldEntsPtr () const
 
auto & getColFieldEnts () const
 
auto & getColFieldEntsPtr () const
 
auto getRowDofsPtr () const
 
auto getColDofsPtr () const
 
auto getNumberOfNodes () const
 
EntityHandle getFEEntityHandle () const
 
MoFEMErrorCode getNodeData (const std::string field_name, VectorDouble &data, const bool reset_dofs=true)
 
- Public Member Functions inherited from MoFEM::BasicMethod
 BasicMethod ()
 
virtual ~BasicMethod ()=default
 
int getNinTheLoop () const
 get number of evaluated element in the loop More...
 
int getLoopSize () const
 get loop size More...
 
auto getLoHiFERank () const
 Get lo and hi processor rank of iterated entities. More...
 
auto getLoFERank () const
 Get upper rank in loop for iterating elements. More...
 
auto getHiFERank () const
 Get upper rank in loop for iterating elements. More...
 
unsigned int getFieldBitNumber (std::string field_name) const
 
MoFEMErrorCode copyBasicMethod (const BasicMethod &basic)
 Copy data from other base method to this base method. More...
 
boost::weak_ptr< CacheTuplegetCacheWeakPtr () const
 Get the cache weak ptr object. More...
 
- Public Member Functions inherited from MoFEM::KspMethod
 KspMethod ()
 
virtual ~KspMethod ()=default
 
MoFEMErrorCode copyKsp (const KspMethod &ksp)
 copy data form another method More...
 
- Public Member Functions inherited from MoFEM::PetscData
 PetscData ()
 
virtual ~PetscData ()=default
 
MoFEMErrorCode copyPetscData (const PetscData &petsc_data)
 
- Public Member Functions inherited from MoFEM::UnknownInterface
template<class IFACE >
MoFEMErrorCode registerInterface (bool error_if_registration_failed=true)
 Register interface. More...
 
template<class IFACE >
MoFEMErrorCode getInterface (IFACE *&iface) const
 Get interface reference to pointer of interface. More...
 
template<class IFACE >
MoFEMErrorCode getInterface (IFACE **const iface) const
 Get interface pointer to pointer of interface. More...
 
template<class IFACE , typename boost::enable_if< boost::is_pointer< IFACE >, int >::type = 0>
IFACE getInterface () const
 Get interface pointer to pointer of interface. More...
 
template<class IFACE , typename boost::enable_if< boost::is_reference< IFACE >, int >::type = 0>
IFACE getInterface () const
 Get reference to interface. More...
 
template<class IFACE >
IFACE * getInterface () const
 Function returning pointer to interface. More...
 
virtual ~UnknownInterface ()=default
 
- Public Member Functions inherited from MoFEM::SnesMethod
 SnesMethod ()
 
virtual ~SnesMethod ()=default
 
MoFEMErrorCode copySnes (const SnesMethod &snes)
 Copy snes data. More...
 
- Public Member Functions inherited from MoFEM::TSMethod
 TSMethod ()
 
virtual ~TSMethod ()=default
 
MoFEMErrorCode copyTs (const TSMethod &ts)
 Copy TS solver data. More...
 

Public Attributes

bool tenNodesPostProcTets
 
std::map< EntityHandle, std::vector< EntityHandle > > elementsMap
 
std::map< EntityHandle, std::vector< PointsMap3D_multiIndex > > pointsMapVectorMap
 
CommonData commonData
 
- Public Attributes inherited from PostProcTemplateOnRefineMesh< MoFEM::FatPrismElementForcesAndSourcesCore >
moab::Core coreMesh
 
moab::Interface & postProcMesh
 
boost::shared_ptr< WrapMPIComm > wrapRefMeshComm
 
std::vector< EntityHandlemapGaussPts
 
- Public Attributes inherited from MoFEM::VolumeElementForcesAndSourcesCore
std::string meshPositionsFieldName
 
- Public Attributes inherited from MoFEM::ForcesAndSourcesCore
InterfacemField
 
RuleHookFun getRuleHook
 Hook to get rule. More...
 
GaussHookFun setRuleHook
 Set function to calculate integration rule. More...
 
MatrixDouble gaussPts
 Matrix of integration points. More...
 
- Public Attributes inherited from MoFEM::FEMethod
std::string feName
 Name of finite element. More...
 
boost::shared_ptr< const NumeredEntFiniteElementnumeredEntFiniteElementPtr
 
boost::function< bool(FEMethod *fe_method_ptr)> exeTestHook
 Tet if element to skip element. More...
 
- Public Attributes inherited from MoFEM::BasicMethod
int nInTheLoop
 number currently of processed method More...
 
int loopSize
 local number oe methods to process More...
 
std::pair< int, int > loHiFERank
 Llo and hi processor rank of iterated entities. More...
 
int rAnk
 processor rank More...
 
int sIze
 number of processors in communicator More...
 
const RefEntity_multiIndexrefinedEntitiesPtr
 container of mofem dof entities More...
 
const RefElement_multiIndexrefinedFiniteElementsPtr
 container of mofem finite element entities More...
 
const ProblemproblemPtr
 raw pointer to problem More...
 
const Field_multiIndexfieldsPtr
 raw pointer to fields container More...
 
const FieldEntity_multiIndexentitiesPtr
 raw pointer to container of field entities More...
 
const DofEntity_multiIndexdofsPtr
 raw pointer container of dofs More...
 
const FiniteElement_multiIndexfiniteElementsPtr
 raw pointer to container finite elements More...
 
const EntFiniteElement_multiIndexfiniteElementsEntitiesPtr
 
const FieldEntityEntFiniteElementAdjacencyMap_multiIndexadjacenciesPtr
 
boost::function< MoFEMErrorCode()> preProcessHook
 Hook function for pre-processing. More...
 
boost::function< MoFEMErrorCode()> postProcessHook
 Hook function for post-processing. More...
 
boost::function< MoFEMErrorCode()> operatorHook
 Hook function for operator. More...
 
boost::movelib::unique_ptr< boolvecAssembleSwitch
 
boost::movelib::unique_ptr< boolmatAssembleSwitch
 
boost::weak_ptr< CacheTuplecacheWeakPtr
 
- Public Attributes inherited from MoFEM::KspMethod
KSPContext ksp_ctx
 Context. More...
 
KSP ksp
 KSP solver. More...
 
Vec & ksp_f
 
Mat & ksp_A
 
Mat & ksp_B
 
- Public Attributes inherited from MoFEM::PetscData
Switches data_ctx
 
Vec f
 
Mat A
 
Mat B
 
Vec x
 
Vec x_t
 
Vec x_tt
 
- Public Attributes inherited from MoFEM::SnesMethod
SNESContext snes_ctx
 
SNES snes
 snes solver More...
 
Vec & snes_x
 state vector More...
 
Vec & snes_f
 residual More...
 
Mat & snes_A
 jacobian matrix More...
 
Mat & snes_B
 preconditioner of jacobian matrix More...
 
- Public Attributes inherited from MoFEM::TSMethod
TS ts
 time solver More...
 
TSContext ts_ctx
 
PetscInt ts_step
 time step number More...
 
PetscReal ts_a
 shift for U_t (see PETSc Time Solver) More...
 
PetscReal ts_aa
 shift for U_tt shift for U_tt More...
 
PetscReal ts_t
 time More...
 
PetscReal ts_dt
 time step size More...
 
Vec & ts_u
 state vector More...
 
Vec & ts_u_t
 time derivative of state vector More...
 
Vec & ts_u_tt
 second time derivative of state vector More...
 
Vec & ts_F
 residual vector More...
 
Mat & ts_A
 
Mat & ts_B
 Preconditioner for ts_A. More...
 

Additional Inherited Members

- Static Public Member Functions inherited from MoFEM::UnknownInterface
static MoFEMErrorCode getLibVersion (Version &version)
 Get library version. More...
 
static MoFEMErrorCode getFileVersion (moab::Interface &moab, Version &version)
 Get database major version. More...
 
static MoFEMErrorCode setFileVersion (moab::Interface &moab, Version version=Version(MoFEM_VERSION_MAJOR, MoFEM_VERSION_MINOR, MoFEM_VERSION_BUILD))
 Get database major version. More...
 
static MoFEMErrorCode getInterfaceVersion (Version &version)
 Get database major version. More...
 
- Static Public Attributes inherited from MoFEM::PetscData
static constexpr Switches CtxSetNone = PetscData::Switches(CTX_SET_NONE)
 
static constexpr Switches CtxSetF = PetscData::Switches(CTX_SET_F)
 
static constexpr Switches CtxSetA = PetscData::Switches(CTX_SET_A)
 
static constexpr Switches CtxSetB = PetscData::Switches(CTX_SET_B)
 
static constexpr Switches CtxSetX = PetscData::Switches(CTX_SET_X)
 
static constexpr Switches CtxSetX_T = PetscData::Switches(CTX_SET_X_T)
 
static constexpr Switches CtxSetX_TT = PetscData::Switches(CTX_SET_X_TT)
 
static constexpr Switches CtxSetTime = PetscData::Switches(CTX_SET_TIME)
 
- Protected Member Functions inherited from MoFEM::VolumeElementForcesAndSourcesCore
virtual MoFEMErrorCode setIntegrationPts ()
 Set integration points. More...
 
virtual MoFEMErrorCode calculateVolumeAndJacobian ()
 Calculate element volume and Jacobian. More...
 
virtual MoFEMErrorCode calculateCoordinatesAtGaussPts ()
 Calculate coordinate at integration points. More...
 
virtual MoFEMErrorCode getSpaceBaseAndOrderOnElement ()
 Determine approximation space and order of base functions. More...
 
virtual MoFEMErrorCode transformBaseFunctions ()
 Transform base functions based on geometric element Jacobian. More...
 
- Protected Member Functions inherited from MoFEM::ForcesAndSourcesCore
MoFEMErrorCode getEntitySense (const EntityType type, boost::ptr_vector< EntitiesFieldData::EntData > &data) const
 get sense (orientation) of entity More...
 
MoFEMErrorCode getEntityDataOrder (const EntityType type, const FieldSpace space, boost::ptr_vector< EntitiesFieldData::EntData > &data) const
 Get the entity data order. More...
 
template<EntityType type>
MoFEMErrorCode getEntitySense (EntitiesFieldData &data) const
 Get the entity sense (orientation) More...
 
template<EntityType type>
MoFEMErrorCode getEntityDataOrder (EntitiesFieldData &data, const FieldSpace space) const
 Get the entity data order for given space. More...
 
MoFEMErrorCode getFaceNodes (EntitiesFieldData &data) const
 Get nodes on faces. More...
 
MoFEMErrorCode getSpacesAndBaseOnEntities (EntitiesFieldData &data) const
 Get field approximation space and base on entities. More...
 
virtual int getRule (int order_row, int order_col, int order_data)
 another variant of getRule More...
 
virtual MoFEMErrorCode setGaussPts (int order_row, int order_col, int order_data)
 set user specific integration rule More...
 
MoFEMErrorCode calHierarchicalBaseFunctionsOnElement (const FieldApproximationBase b)
 Calculate base functions. More...
 
MoFEMErrorCode calHierarchicalBaseFunctionsOnElement ()
 Calculate base functions. More...
 
MoFEMErrorCode calBernsteinBezierBaseFunctionsOnElement ()
 Calculate Bernstein-Bezier base. More...
 
MoFEMErrorCode createDataOnElement (EntityType type)
 Create a entity data on element object. More...
 
MoFEMErrorCode loopOverOperators ()
 Iterate user data operators. More...
 
template<typename EXTRACTOR >
MoFEMErrorCode getNodesIndices (const int bit_number, FieldEntity_vector_view &ents_field, VectorInt &nodes_indices, VectorInt &local_nodes_indices, EXTRACTOR &&extractor) const
 get node indices More...
 
MoFEMErrorCode getRowNodesIndices (EntitiesFieldData &data, const int bit_number) const
 get row node indices from FENumeredDofEntity_multiIndex More...
 
MoFEMErrorCode getColNodesIndices (EntitiesFieldData &data, const int bit_number) const
 get col node indices from FENumeredDofEntity_multiIndex More...
 
template<typename EXTRACTOR >
MoFEMErrorCode getEntityIndices (EntitiesFieldData &data, const int bit_number, FieldEntity_vector_view &ents_field, const EntityType type_lo, const EntityType type_hi, EXTRACTOR &&extractor) const
 
MoFEMErrorCode getEntityRowIndices (EntitiesFieldData &data, const int bit_number, const EntityType type_lo=MBVERTEX, const EntityType type_hi=MBPOLYHEDRON) const
 
MoFEMErrorCode getEntityColIndices (EntitiesFieldData &data, const int bit_number, const EntityType type_lo=MBVERTEX, const EntityType type_hi=MBPOLYHEDRON) const
 
MoFEMErrorCode getNoFieldIndices (const int bit_number, boost::shared_ptr< FENumeredDofEntity_multiIndex > dofs, VectorInt &nodes_indices) const
 get NoField indices More...
 
MoFEMErrorCode getNoFieldRowIndices (EntitiesFieldData &data, const int bit_number) const
 get col NoField indices More...
 
MoFEMErrorCode getNoFieldColIndices (EntitiesFieldData &data, const int bit_number) const
 get col NoField indices More...
 
MoFEMErrorCode getBitRefLevelOnData ()
 
MoFEMErrorCode getNoFieldFieldData (const int bit_number, VectorDouble &ent_field_data, VectorDofs &ent_field_dofs, VectorFieldEntities &ent_field) const
 Get field data on nodes. More...
 
MoFEMErrorCode getNoFieldFieldData (EntitiesFieldData &data, const int bit_number) const
 
MoFEMErrorCode getNodesFieldData (EntitiesFieldData &data, const int bit_number) const
 Get data on nodes. More...
 
MoFEMErrorCode getEntityFieldData (EntitiesFieldData &data, const int bit_number, const EntityType type_lo=MBVERTEX, const EntityType type_hi=MBPOLYHEDRON) const
 
MoFEMErrorCode getProblemNodesIndices (const std::string &field_name, const NumeredDofEntity_multiIndex &dofs, VectorInt &nodes_indices) const
 get indices of nodal indices which are declared for problem but not this particular element More...
 
MoFEMErrorCode getProblemTypeIndices (const std::string &field_name, const NumeredDofEntity_multiIndex &dofs, EntityType type, int side_number, VectorInt &indices) const
 get indices by type (generic function) which are declared for problem but not this particular element More...
 
MoFEMErrorCode getProblemNodesRowIndices (const std::string &field_name, VectorInt &nodes_indices) const
 
MoFEMErrorCode getProblemTypeRowIndices (const std::string &field_name, EntityType type, int side_number, VectorInt &indices) const
 
MoFEMErrorCode getProblemNodesColIndices (const std::string &field_name, VectorInt &nodes_indices) const
 
MoFEMErrorCode getProblemTypeColIndices (const std::string &field_name, EntityType type, int side_number, VectorInt &indices) const
 
virtual int getRule (int order)
 
virtual MoFEMErrorCode setGaussPts (int order)
 
- Protected Attributes inherited from MoFEM::FatPrismElementForcesAndSourcesCore
double aRea [2]
 
VectorDouble normal
 
MatrixDouble gaussPtsTrianglesOnly
 
MatrixDouble coordsAtGaussPtsTrianglesOnly
 
MatrixDouble gaussPtsThroughThickness
 
EntitiesFieldData dataH1TrianglesOnly
 
EntitiesFieldData dataH1TroughThickness
 
MatrixDouble hoCoordsAtGaussPtsF3
 
MatrixDouble nOrmals_at_GaussPtF3
 
MatrixDouble tAngent1_at_GaussPtF3
 
MatrixDouble tAngent2_at_GaussPtF3
 
MatrixDouble hoCoordsAtGaussPtsF4
 
MatrixDouble nOrmals_at_GaussPtF4
 
MatrixDouble tAngent1_at_GaussPtF4
 
MatrixDouble tAngent2_at_GaussPtF4
 
OpGetCoordsAndNormalsOnPrism opHOCoordsAndNormals
 
- Protected Attributes inherited from MoFEM::VolumeElementForcesAndSourcesCore
VectorDouble coords
 
MatrixDouble3by3 jAc
 
MatrixDouble3by3 invJac
 
OpSetInvJacH1 opSetInvJacH1
 
OpSetContravariantPiolaTransform opContravariantPiolaTransform
 
OpSetCovariantPiolaTransform opCovariantPiolaTransform
 
OpSetInvJacHdivAndHcurl opSetInvJacHdivAndHcurl
 
doublevOlume
 
int num_nodes
 
const EntityHandleconn
 
FTensor::Tensor2< double *, 3, 3 > tJac
 
FTensor::Tensor2< double *, 3, 3 > tInvJac
 
- Protected Attributes inherited from MoFEM::ForcesAndSourcesCore
const std::array< boost::shared_ptr< EntitiesFieldData >, LASTSPACEdataOnElement
 Entity data on element entity rows fields. More...
 
const std::array< boost::shared_ptr< EntitiesFieldData >, LASTSPACEderivedDataOnElement
 Entity data on element entity columns fields. More...
 
EntitiesFieldDatadataNoField
 
EntitiesFieldDatadataH1
 
EntitiesFieldDatadataHcurl
 
EntitiesFieldDatadataHdiv
 
EntitiesFieldDatadataL2
 
boost::ptr_deque< UserDataOperatoropPtrVector
 Vector of finite element users data operators. More...
 
EntityType lastEvaluatedElementEntityType
 Last evaluated type of element entity. More...
 
MatrixDouble coordsAtGaussPts
 coordinated at gauss points More...
 
double elementMeasure
 

Detailed Description

Postprocess on prism.

Examples
elasticity.cpp.

Definition at line 973 of file PostProcOnRefMesh.hpp.

Member Typedef Documentation

◆ PointsMap3D_multiIndex

typedef multi_index_container< PointsMap3D, indexed_by<ordered_unique<composite_key< PointsMap3D, member<PointsMap3D, const int, &PointsMap3D::kSi>, member<PointsMap3D, const int, &PointsMap3D::eTa>, member<PointsMap3D, const int, &PointsMap3D::zEta> > > > > PostProcFatPrismOnRefinedMesh::PointsMap3D_multiIndex

Definition at line 1003 of file PostProcOnRefMesh.hpp.

Constructor & Destructor Documentation

◆ PostProcFatPrismOnRefinedMesh()

PostProcFatPrismOnRefinedMesh::PostProcFatPrismOnRefinedMesh ( MoFEM::Interface m_field,
bool  ten_nodes_post_proc_tets = true 
)
inline

Definition at line 979 of file PostProcOnRefMesh.hpp.

983  tenNodesPostProcTets(ten_nodes_post_proc_tets) {}

Member Function Documentation

◆ generateReferenceElementMesh()

MoFEMErrorCode PostProcFatPrismOnRefinedMesh::generateReferenceElementMesh ( )

Definition at line 320 of file PostProcOnRefMesh.cpp.

320  {
323 }

◆ getCommonData()

virtual PostProcCommonOnRefMesh::CommonData& PostProcFatPrismOnRefinedMesh::getCommonData ( )
inlinevirtual

Reimplemented from PostProcTemplateOnRefineMesh< MoFEM::FatPrismElementForcesAndSourcesCore >.

Definition at line 1022 of file PostProcOnRefMesh.hpp.

1022  {
1023  return commonData;
1024  }

◆ getRuleThroughThickness()

int PostProcFatPrismOnRefinedMesh::getRuleThroughThickness ( int  order)
inlinevirtual

Reimplemented from MoFEM::FatPrismElementForcesAndSourcesCore.

Definition at line 986 of file PostProcOnRefMesh.hpp.

986 { return -1; };

◆ getRuleTrianglesOnly()

int PostProcFatPrismOnRefinedMesh::getRuleTrianglesOnly ( int  order)
inlinevirtual

Reimplemented from MoFEM::FatPrismElementForcesAndSourcesCore.

Definition at line 985 of file PostProcOnRefMesh.hpp.

985 { return -1; };

◆ postProcess()

MoFEMErrorCode PostProcFatPrismOnRefinedMesh::postProcess ( )
virtual

function is run at the end of loop

It is used to assembly matrices and vectors, calculating global variables, f.e. total internal energy, ect.

Iterating over dofs: Example1 iterating over dofs in row by name of the field for(IT_GET_FEROW_BY_NAME_DOFS_FOR_LOOP(this,"DISPLACEMENT",it)) { ... }

Reimplemented from MoFEM::ForcesAndSourcesCore.

Definition at line 516 of file PostProcOnRefMesh.cpp.

516  {
518  ParallelComm *pcomm_post_proc_mesh =
519  ParallelComm::get_pcomm(&postProcMesh, MYPCOMM_INDEX);
520  if (pcomm_post_proc_mesh == NULL) {
521  // wrapRefMeshComm = boost::make_shared<WrapMPIComm>(mField.get_comm(), false);
522  pcomm_post_proc_mesh =
523  new ParallelComm(&postProcMesh, PETSC_COMM_WORLD/*wrapRefMeshComm->get_comm()*/);
524  }
525 
526  Range prims;
527  CHKERR postProcMesh.get_entities_by_type(0, MBPRISM, prims, false);
528  // std::cerr << "total prims size " << prims.size() << std::endl;
529  int rank = mField.get_comm_rank();
530  Range::iterator pit = prims.begin();
531  for (; pit != prims.end(); pit++) {
532  CHKERR postProcMesh.tag_set_data(pcomm_post_proc_mesh->part_tag(), &*pit, 1,
533  &rank);
534  }
535  CHKERR pcomm_post_proc_mesh->resolve_shared_ents(0);
537 }

◆ preProcess()

MoFEMErrorCode PostProcFatPrismOnRefinedMesh::preProcess ( )
virtual

function is run at the beginning of loop

It is used to zeroing matrices and vectors, calculation of shape functions on reference element, preprocessing boundary conditions, etc.

Reimplemented from MoFEM::ForcesAndSourcesCore.

Definition at line 511 of file PostProcOnRefMesh.cpp.

511  {
514 }

◆ setGaussPtsThroughThickness()

MoFEMErrorCode PostProcFatPrismOnRefinedMesh::setGaussPtsThroughThickness ( int  order_thickness)
virtual

Reimplemented from MoFEM::FatPrismElementForcesAndSourcesCore.

Definition at line 500 of file PostProcOnRefMesh.cpp.

501  {
503  if (gaussPtsThroughThickness.size1() == 0 ||
504  gaussPtsThroughThickness.size2() == 0) {
505  SETERRQ(PETSC_COMM_SELF, MOFEM_DATA_INCONSISTENCY,
506  "post-process mesh not generated");
507  }
509 }

◆ setGaussPtsTrianglesOnly()

MoFEMErrorCode PostProcFatPrismOnRefinedMesh::setGaussPtsTrianglesOnly ( int  order_triangles_only)
virtual

Reimplemented from MoFEM::FatPrismElementForcesAndSourcesCore.

Definition at line 325 of file PostProcOnRefMesh.cpp.

326  {
328  // if(gaussPtsTrianglesOnly.size1()==0 || gaussPtsTrianglesOnly.size2()==0) {
329  // SETERRQ(PETSC_COMM_SELF,MOFEM_DATA_INCONSISTENCY,"post-process mesh not
330  // generated");
331  // }
332 
333  int max_ref_level_thick = 0;
334  PetscBool flg = PETSC_TRUE;
335  PetscOptionsGetInt(PETSC_NULL, PETSC_NULL,
336  "-my_max_post_proc_ref_level_prism_thick",
337  &max_ref_level_thick, &flg);
338  int const level_thick = max_ref_level_thick + 1;
339  const EntityHandle *conn;
340  int num_nodes;
341  EntityHandle prism;
342  const int nb_on_triangle = 6;
343  const int nb_through_thickness = 3;
344 
345  std::vector<PointsMap3D_multiIndex> pointsMapVector;
346  PointsMap3D_multiIndex pointsMap;
347 
348  if (elementsMap.find(numeredEntFiniteElementPtr->getEnt()) !=
349  elementsMap.end()) {
350  pointsMapVector = pointsMapVectorMap[numeredEntFiniteElementPtr->getEnt()];
351  } else {
352  pointsMapVector.resize(0);
353  gaussPtsTrianglesOnly.resize(3, nb_on_triangle, false);
354  gaussPtsTrianglesOnly.clear();
355  gaussPtsThroughThickness.resize(2, nb_through_thickness * level_thick,
356  false);
357  gaussPtsThroughThickness.clear();
358 
359  MatrixDouble gauss_pts_triangles_only, gauss_pts_through_thickness;
360 
361  double inc_thick = 1.0 / (double)level_thick;
362  for (int ll = 0; ll < level_thick; ll++) {
363 
364  gauss_pts_triangles_only.resize(3, 3, false);
365  gauss_pts_triangles_only.clear();
366  gauss_pts_triangles_only(0, 0) = 0;
367  gauss_pts_triangles_only(1, 0) = 0;
368  gauss_pts_triangles_only(0, 1) = 1;
369  gauss_pts_triangles_only(1, 1) = 0;
370  gauss_pts_triangles_only(0, 2) = 0;
371  gauss_pts_triangles_only(1, 2) = 1;
372  gauss_pts_through_thickness.resize(2, 2, false);
373  gauss_pts_through_thickness(0, 0) = ll * inc_thick;
374  gauss_pts_through_thickness(0, 1) = (ll + 1) * inc_thick;
375 
376  ublas::vector<EntityHandle> prism_conn(6);
377  VectorDouble coords(3);
378  for (int ggf = 0; ggf != 3; ggf++) {
379  double ksi = gauss_pts_triangles_only(0, ggf);
380  double eta = gauss_pts_triangles_only(1, ggf);
381  coords[0] = ksi;
382  coords[1] = eta;
383  for (int ggt = 0; ggt != 2; ggt++) {
384  double zeta = gauss_pts_through_thickness(0, ggt);
385  coords[2] = zeta;
386  int side = ggt * 3 + ggf;
387  CHKERR postProcMesh.create_vertex(&coords[0], prism_conn[side]);
388  }
389  }
390  CHKERR postProcMesh.create_element(MBPRISM, &prism_conn[0], 6, prism);
391 
392  elementsMap[numeredEntFiniteElementPtr->getEnt()].push_back(prism);
393  // Range faces;
394  // CHKERR postProcMesh.get_adjacencies(&prism,1,2,true,faces);
395  Range edges;
396  CHKERR postProcMesh.get_adjacencies(&prism, 1, 1, true, edges);
397  EntityHandle meshset;
398  CHKERR postProcMesh.create_meshset(MESHSET_SET, meshset);
399  CHKERR postProcMesh.add_entities(meshset, &prism, 1);
400  // CHKERR postProcMesh.add_entities(meshset,faces);
401  CHKERR postProcMesh.add_entities(meshset, edges);
402  if (tenNodesPostProcTets) {
403  CHKERR postProcMesh.convert_entities(meshset, true, false, false);
404  }
405  CHKERR postProcMesh.delete_entities(&meshset, 1);
406  CHKERR postProcMesh.delete_entities(edges);
407  // CHKERR postProcMesh.delete_entities(faces);
408 
409  CHKERR mField.get_moab().get_connectivity(
410  numeredEntFiniteElementPtr->getEnt(), conn, num_nodes, true);
411  MatrixDouble coords_prism_global;
412  coords_prism_global.resize(num_nodes, 3, false);
413  CHKERR mField.get_moab().get_coords(conn, num_nodes,
414  &coords_prism_global(0, 0));
415 
416  CHKERR postProcMesh.get_connectivity(prism, conn, num_nodes, false);
417  MatrixDouble coords_prism_local;
418  coords_prism_local.resize(num_nodes, 3, false);
419  CHKERR postProcMesh.get_coords(conn, num_nodes,
420  &coords_prism_local(0, 0));
421 
422  const double eps = 1e-6;
423  int ggf = 0, ggt = 0;
424 
425  pointsMap.clear();
426 
427  for (int nn = 0; nn != num_nodes; nn++) {
428  double ksi = coords_prism_local(nn, 0);
429  double eta = coords_prism_local(nn, 1);
430  double zeta = coords_prism_local(nn, 2);
431  pointsMap.insert(PointsMap3D(ksi * 100, eta * 100, zeta * 100, nn));
432  if (fabs(zeta) < eps) {
433  gaussPtsTrianglesOnly(0, ggf) = ksi;
434  gaussPtsTrianglesOnly(1, ggf) = eta;
435  ggf++;
436  }
437  if (fabs(ksi) < eps && fabs(eta) < eps) {
438  gaussPtsThroughThickness(0, ggt + nb_through_thickness * ll) = zeta;
439  ggt++;
440  }
441  }
442 
443  pointsMapVector.push_back(pointsMap);
444 
445  for (int nn = 0; nn != num_nodes; nn++) {
446  const double ksi = coords_prism_local(nn, 0);
447  const double eta = coords_prism_local(nn, 1);
448  const double zeta = coords_prism_local(nn, 2);
449  const double n0 = N_MBTRI0(ksi, eta);
450  const double n1 = N_MBTRI1(ksi, eta);
451  const double n2 = N_MBTRI2(ksi, eta);
452  const double e0 = N_MBEDGE0(zeta);
453  const double e1 = N_MBEDGE1(zeta);
454  double coords_global[3];
455  for (int dd = 0; dd != 3; dd++) {
456  coords_global[dd] = n0 * e0 * coords_prism_global(0, dd) +
457  n1 * e0 * coords_prism_global(1, dd) +
458  n2 * e0 * coords_prism_global(2, dd) +
459  n0 * e1 * coords_prism_global(3, dd) +
460  n1 * e1 * coords_prism_global(4, dd) +
461  n2 * e1 * coords_prism_global(5, dd);
462  }
463  CHKERR postProcMesh.set_coords(&conn[nn], 1, coords_global);
464  }
465  }
466 
467  pointsMapVectorMap[numeredEntFiniteElementPtr->getEnt()] = pointsMapVector;
468  }
469 
470  mapGaussPts.clear();
471  mapGaussPts.resize(nb_through_thickness * nb_on_triangle * level_thick);
472  fill(mapGaussPts.begin(), mapGaussPts.end(), 0);
473  int gg = 0;
474  int ll;
475 
476  for (unsigned int ggf = 0; ggf != gaussPtsTrianglesOnly.size2(); ggf++) {
477  const double ksi = gaussPtsTrianglesOnly(0, ggf);
478  const double eta = gaussPtsTrianglesOnly(1, ggf);
479  for (unsigned int ggt = 0; ggt != gaussPtsThroughThickness.size2();
480  ggt++, gg++) {
481  ll = ggt / 3;
482  prism = elementsMap[numeredEntFiniteElementPtr->getEnt()][ll];
483  pointsMap = pointsMapVector[ll];
484  CHKERR postProcMesh.get_connectivity(prism, conn, num_nodes, false);
485 
486  const double zeta = gaussPtsThroughThickness(0, ggt);
487  PointsMap3D_multiIndex::iterator it;
488  it = pointsMap.find(boost::make_tuple(ksi * 100, eta * 100, zeta * 100));
489  if (it != pointsMap.end()) {
490  mapGaussPts[gg] = conn[it->nN];
491  }
492  }
493  }
494 
495  int g = 0;
496 
498 }

Member Data Documentation

◆ commonData

CommonData PostProcFatPrismOnRefinedMesh::commonData

Definition at line 1020 of file PostProcOnRefMesh.hpp.

◆ elementsMap

std::map<EntityHandle, std::vector<EntityHandle> > PostProcFatPrismOnRefinedMesh::elementsMap

Definition at line 1012 of file PostProcOnRefMesh.hpp.

◆ pointsMapVectorMap

std::map<EntityHandle, std::vector<PointsMap3D_multiIndex> > PostProcFatPrismOnRefinedMesh::pointsMapVectorMap

Definition at line 1014 of file PostProcOnRefMesh.hpp.

◆ tenNodesPostProcTets

bool PostProcFatPrismOnRefinedMesh::tenNodesPostProcTets

Definition at line 977 of file PostProcOnRefMesh.hpp.


The documentation for this struct was generated from the following files:
MoFEMFunctionReturnHot
#define MoFEMFunctionReturnHot(a)
Last executable line of each PETSc function used for error handling. Replaces return()
Definition: definitions.h:447
g
constexpr double g
Definition: shallow_wave.cpp:63
MYPCOMM_INDEX
#define MYPCOMM_INDEX
default communicator number PCOMM
Definition: definitions.h:215
PostProcFatPrismOnRefinedMesh::elementsMap
std::map< EntityHandle, std::vector< EntityHandle > > elementsMap
Definition: PostProcOnRefMesh.hpp:1012
EntityHandle
PostProcFatPrismOnRefinedMesh::pointsMapVectorMap
std::map< EntityHandle, std::vector< PointsMap3D_multiIndex > > pointsMapVectorMap
Definition: PostProcOnRefMesh.hpp:1014
PostProcTemplateOnRefineMesh< MoFEM::FatPrismElementForcesAndSourcesCore >::postProcMesh
moab::Interface & postProcMesh
Definition: PostProcOnRefMesh.hpp:122
MoFEM::Types::MatrixDouble
UBlasMatrix< double > MatrixDouble
Definition: Types.hpp:77
MoFEM::CoreInterface::get_comm_rank
virtual int get_comm_rank() const =0
MoFEM::FatPrismElementForcesAndSourcesCore::gaussPtsTrianglesOnly
MatrixDouble gaussPtsTrianglesOnly
Definition: FatPrismElementForcesAndSourcesCore.hpp:189
N_MBEDGE0
#define N_MBEDGE0(x)
edge shape function
Definition: fem_tools.h:105
zeta
double zeta
Viscous hardening.
Definition: plastic.cpp:126
MoFEM::VolumeElementForcesAndSourcesCore::coords
VectorDouble coords
Definition: VolumeElementForcesAndSourcesCore.hpp:89
CHKERR
#define CHKERR
Inline error check.
Definition: definitions.h:535
MoFEM::VolumeElementForcesAndSourcesCore::num_nodes
int num_nodes
Definition: VolumeElementForcesAndSourcesCore.hpp:100
MoFEM::CoreInterface::get_moab
virtual moab::Interface & get_moab()=0
PostProcFatPrismOnRefinedMesh::PointsMap3D_multiIndex
multi_index_container< PointsMap3D, indexed_by< ordered_unique< composite_key< PointsMap3D, member< PointsMap3D, const int, &PointsMap3D::kSi >, member< PointsMap3D, const int, &PointsMap3D::eTa >, member< PointsMap3D, const int, &PointsMap3D::zEta > > > > > PointsMap3D_multiIndex
Definition: PostProcOnRefMesh.hpp:1003
N_MBEDGE1
#define N_MBEDGE1(x)
edge shape function
Definition: fem_tools.h:106
double
MoFEM::VolumeElementForcesAndSourcesCore::conn
const EntityHandle * conn
Definition: VolumeElementForcesAndSourcesCore.hpp:101
eta
double eta
Definition: free_surface.cpp:170
PostProcTemplateOnRefineMesh
Generic post-processing class.
Definition: PostProcOnRefMesh.hpp:118
PostProcFatPrismOnRefinedMesh::tenNodesPostProcTets
bool tenNodesPostProcTets
Definition: PostProcOnRefMesh.hpp:977
MoFEM::FatPrismElementForcesAndSourcesCore
FatPrism finite element.
Definition: FatPrismElementForcesAndSourcesCore.hpp:31
MoFEM::FatPrismElementForcesAndSourcesCore::gaussPtsThroughThickness
MatrixDouble gaussPtsThroughThickness
Definition: FatPrismElementForcesAndSourcesCore.hpp:191
N_MBTRI0
#define N_MBTRI0(x, y)
triangle shape function
Definition: fem_tools.h:46
Range
FTensor::dd
const Tensor2_symmetric_Expr< const ddTensor0< T, Dim, i, j >, typename promote< T, double >::V, Dim, i, j > dd(const Tensor0< T * > &a, const Index< i, Dim > index1, const Index< j, Dim > index2, const Tensor1< int, Dim > &d_ijk, const Tensor1< double, Dim > &d_xyz)
Definition: ddTensor0.hpp:33
PostProcTemplateOnRefineMesh< MoFEM::FatPrismElementForcesAndSourcesCore >::mapGaussPts
std::vector< EntityHandle > mapGaussPts
Definition: PostProcOnRefMesh.hpp:125
N_MBTRI1
#define N_MBTRI1(x, y)
triangle shape function
Definition: fem_tools.h:47
eps
static const double eps
Definition: check_base_functions_derivatives_on_tet.cpp:11
MOFEM_DATA_INCONSISTENCY
@ MOFEM_DATA_INCONSISTENCY
Definition: definitions.h:31
MoFEM::Types::VectorDouble
UBlasVector< double > VectorDouble
Definition: Types.hpp:68
MoFEM::FEMethod::numeredEntFiniteElementPtr
boost::shared_ptr< const NumeredEntFiniteElement > numeredEntFiniteElementPtr
Definition: LoopMethods.hpp:383
MoFEMFunctionBeginHot
#define MoFEMFunctionBeginHot
First executable line of each MoFEM function, used for error handling. Final line of MoFEM functions ...
Definition: definitions.h:440
PostProcFatPrismOnRefinedMesh::commonData
CommonData commonData
Definition: PostProcOnRefMesh.hpp:1020
MoFEM::PetscOptionsGetInt
PetscErrorCode PetscOptionsGetInt(PetscOptions *, const char pre[], const char name[], PetscInt *ivalue, PetscBool *set)
Definition: DeprecatedPetsc.hpp:142
MoFEMFunctionReturn
#define MoFEMFunctionReturn(a)
Last executable line of each PETSc function used for error handling. Replaces return()
Definition: definitions.h:416
MoFEMFunctionBegin
#define MoFEMFunctionBegin
First executable line of each MoFEM function, used for error handling. Final line of MoFEM functions ...
Definition: definitions.h:346
MoFEM::ForcesAndSourcesCore::mField
Interface & mField
Definition: ForcesAndSourcesCore.hpp:24
N_MBTRI2
#define N_MBTRI2(x, y)
triangle shape function
Definition: fem_tools.h:48