#include "users_modules/eshelbian_plasticity/src/EshelbianPlasticity.hpp"

Inheritance diagram for EshelbianPlasticity::OpSpatialPhysical_du_dBubble:

Collaboration diagram for EshelbianPlasticity::OpSpatialPhysical_du_dBubble:

Public Member Functions
	OpSpatialPhysical_du_dBubble (std::string row_field, std::string col_field, boost::shared_ptr< DataAtIntegrationPts > data_ptr, const bool assemble_off=false)

MoFEMErrorCode	integrate (EntData &row_data, EntData &col_data)

Public Member Functions inherited from EshelbianPlasticity::OpAssembleVolume
MoFEMErrorCode	assemble (int row_side, int col_side, EntityType row_type, EntityType col_type, EntData &row_data, EntData &col_data)

Public Member Functions inherited from EshelbianPlasticity::OpAssembleBasic< VolUserDataOperator >
	OpAssembleBasic (const std::string &field_name, boost::shared_ptr< DataAtIntegrationPts > data_ptr, const char type)

	OpAssembleBasic (std::string row_field, std::string col_field, boost::shared_ptr< DataAtIntegrationPts > data_ptr, const char type, const bool assemble_symmetry, ScaleOff scale_off=[]() { return 1;})

	OpAssembleBasic (const FieldSpace space)

virtual MoFEMErrorCode	integrate (EntData &data)

virtual MoFEMErrorCode	integrate (int row_side, EntityType row_type, EntData &data)

virtual MoFEMErrorCode	assemble (EntData &data)

virtual MoFEMErrorCode	assemble (int row_side, EntityType row_type, EntData &data)

MoFEMErrorCode	doWork (int side, EntityType type, EntData &data)

MoFEMErrorCode	doWork (int row_side, int col_side, EntityType row_type, EntityType col_type, EntData &row_data, EntData &col_data)

Public Member Functions inherited from MoFEM::VolumeElementForcesAndSourcesCore::UserDataOperator
int	getNumNodes ()
	get element number of nodes

const EntityHandle *	getConn ()
	get element connectivity

double	getVolume () const
	element volume (linear geometry)

double &	getVolume ()
	element volume (linear geometry)

FTensor::Tensor2< double *, 3, 3 > &	getJac ()
	get element Jacobian

FTensor::Tensor2< double *, 3, 3 > &	getInvJac ()
	get element inverse Jacobian

VectorDouble &	getCoords ()
	nodal coordinates

VolumeElementForcesAndSourcesCore *	getVolumeFE () const
	return pointer to Generic Volume Finite Element object

Public Member Functions inherited from MoFEM::ForcesAndSourcesCore::UserDataOperator
	UserDataOperator (const FieldSpace space, const char type=OPSPACE, const bool symm=true)

	UserDataOperator (const std::string field_name, const char type, const bool symm=true)

	UserDataOperator (const std::string row_field_name, const std::string col_field_name, const char type, const bool symm=true)

boost::shared_ptr< const NumeredEntFiniteElement >	getNumeredEntFiniteElementPtr () const
	Return raw pointer to NumeredEntFiniteElement.

EntityHandle	getFEEntityHandle () const
	Return finite element entity handle.

int	getFEDim () const
	Get dimension of finite element.

EntityType	getFEType () const
	Get dimension of finite element.

boost::weak_ptr< SideNumber >	getSideNumberPtr (const int side_number, const EntityType type)
	Get the side number pointer.

EntityHandle	getSideEntity (const int side_number, const EntityType type)
	Get the side entity.

int	getNumberOfNodesOnElement () const
	Get the number of nodes on finite element.

MoFEMErrorCode	getProblemRowIndices (const std::string filed_name, const EntityType type, const int side, VectorInt &indices) const
	Get row indices.

MoFEMErrorCode	getProblemColIndices (const std::string filed_name, const EntityType type, const int side, VectorInt &indices) const
	Get col indices.

const FEMethod *	getFEMethod () const
	Return raw pointer to Finite Element Method object.

int	getOpType () const
	Get operator types.

void	setOpType (const OpType type)
	Set operator type.

void	addOpType (const OpType type)
	Add operator type.

int	getNinTheLoop () const
	get number of finite element in the loop

int	getLoopSize () const
	get size of elements in the loop

std::string	getFEName () const
	Get name of the element.

ForcesAndSourcesCore *	getPtrFE () const

ForcesAndSourcesCore *	getSidePtrFE () const

ForcesAndSourcesCore *	getRefinePtrFE () const

const PetscData::Switches &	getDataCtx () const

const KspMethod::KSPContext	getKSPCtx () const

const SnesMethod::SNESContext	getSNESCtx () const

const TSMethod::TSContext	getTSCtx () const

Vec	getKSPf () const

Mat	getKSPA () const

Mat	getKSPB () const

Vec	getSNESf () const

Vec	getSNESx () const

Mat	getSNESA () const

Mat	getSNESB () const

Vec	getTSu () const

Vec	getTSu_t () const

Vec	getTSu_tt () const

Vec	getTSf () const

Mat	getTSA () const

Mat	getTSB () const

int	getTSstep () const

double	getTStime () const

double	getTStimeStep () const

double	getTSa () const

double	getTSaa () const

MatrixDouble &	getGaussPts ()
	matrix of integration (Gauss) points for Volume Element

auto	getFTensor0IntegrationWeight ()
	Get integration weights.

MatrixDouble &	getCoordsAtGaussPts ()
	Gauss points and weight, matrix (nb. of points x 3)

auto	getFTensor1CoordsAtGaussPts ()
	Get coordinates at integration points assuming linear geometry.

double	getMeasure () const
	get measure of element

double &	getMeasure ()
	get measure of element

MoFEMErrorCode	loopSide (const string &fe_name, ForcesAndSourcesCore side_fe, const size_t dim, const EntityHandle ent_for_side=0, boost::shared_ptr< Range > fe_range=nullptr, const int verb=QUIET, const LogManager::SeverityLevel sev=Sev::noisy, AdjCache adj_cache=nullptr)
	User calls this function to loop over elements on the side of face. This function calls finite element with its operator to do calculations.

MoFEMErrorCode	loopThis (const string &fe_name, ForcesAndSourcesCore *this_fe, const int verb=QUIET, const LogManager::SeverityLevel sev=Sev::noisy)
	User calls this function to loop over the same element using a different set of integration points. This function calls finite element with its operator to do calculations.

MoFEMErrorCode	loopParent (const string &fe_name, ForcesAndSourcesCore *parent_fe, const int verb=QUIET, const LogManager::SeverityLevel sev=Sev::noisy)
	User calls this function to loop over parent elements. This function calls finite element with its operator to do calculations.

MoFEMErrorCode	loopChildren (const string &fe_name, ForcesAndSourcesCore *child_fe, const int verb=QUIET, const LogManager::SeverityLevel sev=Sev::noisy)
	User calls this function to loop over parent elements. This function calls finite element with its operator to do calculations.

MoFEMErrorCode	loopRange (const string &fe_name, ForcesAndSourcesCore *range_fe, boost::shared_ptr< Range > fe_range, const int verb=QUIET, const LogManager::SeverityLevel sev=Sev::noisy)
	Iterate over range of elements.

Public Member Functions inherited from MoFEM::DataOperator
	DataOperator (const bool symm=true)

virtual	~DataOperator ()=default

virtual MoFEMErrorCode	opLhs (EntitiesFieldData &row_data, EntitiesFieldData &col_data)

virtual MoFEMErrorCode	opRhs (EntitiesFieldData &data, const bool error_if_no_base=false)

bool	getSymm () const
	Get if operator uses symmetry of DOFs or not.

void	setSymm ()
	set if operator is executed taking in account symmetry

void	unSetSymm ()
	unset if operator is executed for non symmetric problem

Additional Inherited Members
Public Types inherited from EshelbianPlasticity::OpAssembleVolume
using	OP = OpAssembleBasic<VolUserDataOperator>

Public Types inherited from EshelbianPlasticity::OpAssembleBasic< VolUserDataOperator >
using	ScaleOff

Public Types inherited from MoFEM::ForcesAndSourcesCore::UserDataOperator
enum	OpType { OPROW = 1 << 0 , OPCOL = 1 << 1 , OPROWCOL = 1 << 2 , OPSPACE = 1 << 3 , OPLAST = 1 << 3 }
	Controls loop over entities on element. More...

using	AdjCache

Public Types inherited from MoFEM::DataOperator
using	DoWorkLhsHookFunType

using	DoWorkRhsHookFunType

Public Attributes inherited from EshelbianPlasticity::OpAssembleBasic< VolUserDataOperator >
const bool	assembleSymmetry

boost::shared_ptr< DataAtIntegrationPts >	dataAtPts
	data at integration pts

VectorDouble	nF
	local right hand side vector

MatrixDouble	K
	local tangent matrix

MatrixDouble	transposeK

ScaleOff	scaleOff

Public Attributes inherited from MoFEM::ForcesAndSourcesCore::UserDataOperator
char	opType

std::string	rowFieldName

std::string	colFieldName

FieldSpace	sPace

Public Attributes inherited from MoFEM::DataOperator
DoWorkLhsHookFunType	doWorkLhsHook

DoWorkRhsHookFunType	doWorkRhsHook

bool	sYmm
	If true assume that matrix is symmetric structure.

std::array< bool, MBMAXTYPE >	doEntities
	If true operator is executed for entity.

bool &	doVertices
	\deprectaed If false skip vertices

bool &	doEdges
	\deprectaed If false skip edges

bool &	doQuads
	\deprectaed

bool &	doTris
	\deprectaed

bool &	doTets
	\deprectaed

bool &	doPrisms
	\deprectaed

Static Public Attributes inherited from MoFEM::ForcesAndSourcesCore::UserDataOperator
static const char *const	OpTypeNames []

Protected Member Functions inherited from MoFEM::VolumeElementForcesAndSourcesCore::UserDataOperator
MoFEMErrorCode	setPtrFE (ForcesAndSourcesCore *ptr)

Protected Member Functions inherited from MoFEM::ForcesAndSourcesCore::UserDataOperator
Protected Attributes inherited from MoFEM::ForcesAndSourcesCore::UserDataOperator
ForcesAndSourcesCore *	ptrFE

Static Protected Attributes inherited from EshelbianPlasticity::OpAssembleVolume
static std::map< std::pair< std::string, std::string >, MatrixDouble >	mapMatrix

Detailed Description

Definition at line 741 of file EshelbianPlasticity.hpp.

Constructor & Destructor Documentation

◆ OpSpatialPhysical_du_dBubble()

EshelbianPlasticity::OpSpatialPhysical_du_dBubble::OpSpatialPhysical_du_dBubble	(	std::string	row_field,
		std::string	col_field,
		boost::shared_ptr< DataAtIntegrationPts >	data_ptr,
		const bool	assemble_off = false )

inline

Definition at line 742 of file EshelbianPlasticity.hpp.

                              {
 
struct CGGUserPolynomialBase : public TetPolynomialBase {
 
  using CachePhi = boost::tuple<int, int, MatrixDouble>;
 
  CGGUserPolynomialBase(boost::shared_ptr<CachePhi> cache_phi = nullptr);
  ~CGGUserPolynomialBase() = default;
 
  MoFEMErrorCode query_interface(boost::typeindex::type_index type_index,
                                 BaseFunctionUnknownInterface **iface) const;
  MoFEMErrorCode getValue(MatrixDouble &pts,
                          boost::shared_ptr<BaseFunctionCtx> ctx_ptr);
 
private:
  MatrixDouble shapeFun;
  boost::shared_ptr<CachePhi> cachePhiPtr;
 
  MoFEMErrorCode getValueHdivForCGGBubble(MatrixDouble &pts);
};
 
struct ContactTree;
 
enum SymmetrySelector { SYMMETRIC, NOT_SYMMETRIC, ANIT_SYMMETRIC };
enum RotSelector { SMALL_ROT, MODERATE_ROT, LARGE_ROT, NO_H1_CONFIGURATION };
enum StretchSelector {
  LINEAR,
  LOG /*linar extenion*/,
  LOG_QUADRATIC /*quadratic extension*/,
  STRETCH_SELECTOR_LAST
};
enum EnergyReleaseSelector { GRIFFITH_FORCE, GRIFFITH_SKELETON };
 
using MatrixPtr = boost::shared_ptr<MatrixDouble>;
using VectorPtr = boost::shared_ptr<VectorDouble>;
 
using EntData = EntitiesFieldData::EntData;
using UserDataOperator = ForcesAndSourcesCore::UserDataOperator;
using VolUserDataOperator = VolumeElementForcesAndSourcesCore::UserDataOperator;
using FaceUserDataOperator = FaceElementForcesAndSourcesCore::UserDataOperator;
using EleOnSide = PipelineManager::ElementsAndOpsByDim<SPACE_DIM>::FaceSideEle;
using SideEleOp = EleOnSide::UserDataOperator;
 
struct PhysicalEquations;
 
struct AnalyticalExprPython;
 
struct DataAtIntegrationPts
    : public boost::enable_shared_from_this<DataAtIntegrationPts> {
 
  MatrixDouble approxPAtPts;
  MatrixDouble approxSigmaAtPts;
  MatrixDouble divPAtPts;
  MatrixDouble divSigmaAtPts;
  MatrixDouble wL2AtPts;
  MatrixDouble wL2DotAtPts;
  MatrixDouble wL2DotDotAtPts;
  MatrixDouble logStretchTensorAtPts;
  MatrixDouble stretchTensorAtPts;
  VectorDouble jacobianAtPts;
  MatrixDouble tractionAtPts;
 
  MatrixDouble diffStretchTensorAtPts;
  VectorDouble detStretchTensorAtPts;
  MatrixDouble detStretchTensorAtPts_du;
  MatrixDouble logStretchDotTensorAtPts;
  MatrixDouble gradLogStretchDotTensorAtPts;
  MatrixDouble rotAxisAtPts;
  MatrixDouble rotAxisDotAtPts;
  MatrixDouble rotAxisGradDotAtPts;
  MatrixDouble rotAxis0AtPts;
  MatrixDouble WAtPts;
  MatrixDouble W0AtPts;
  MatrixDouble GAtPts;
  MatrixDouble G0AtPts;
  MatrixDouble wH1AtPts;
  MatrixDouble XH1AtPts;
  MatrixDouble contactL2AtPts;
  MatrixDouble wGradH1AtPts;
  MatrixDouble logStretch2H1AtPts;
  MatrixDouble logStretchTotalTensorAtPts;
 
  MatrixDouble hAtPts;
  MatrixDouble hdOmegaAtPts;
  MatrixDouble hdLogStretchAtPts;
  MatrixDouble leviKirchhoffAtPts;
  MatrixDouble leviKirchhoffdOmegaAtPts;
  MatrixDouble leviKirchhoffdLogStreatchAtPts;
  MatrixDouble leviKirchhoffPAtPts;
  MatrixDouble adjointPdstretchAtPts;
  MatrixDouble adjointPdUAtPts;
  MatrixDouble adjointPdUdOmegaAtPts;
  MatrixDouble adjointPdUdPAtPts;
  MatrixDouble rotMatAtPts;
  MatrixDouble PAtPts;
  MatrixDouble SigmaAtPts;
  VectorDouble energyAtPts; //< this is density of energy at integration points
  MatrixDouble flowL2AtPts;
 
  MatrixDouble varRotAxis;
  MatrixDouble varLogStreach;
  MatrixDouble varPiola;
  MatrixDouble varDivPiola;
  MatrixDouble varWL2;
 
  MatrixDouble P_du;
 
  MatrixDouble eigenVals;
  MatrixDouble eigenVecs;
  VectorInt nbUniq;
  MatrixDouble eigenValsC;
  MatrixDouble eigenVecsC;
  VectorInt nbUniqC;
 
  MatrixDouble matD;
  MatrixDouble matAxiatorD;
  MatrixDouble matDeviatorD;
  MatrixDouble matInvD;
 
  MatrixDouble internalStressAtPts;
 
  MatrixDouble facePiolaAtPts;
  MatrixDouble gradHybridDispAtPts;
  MatrixDouble faceMaterialForceAtPts;
  VectorDouble normalPressureAtPts;
 
  double mu;
  double lambda;
  double piolaScale = 1.;
  double faceEnergy = 0.;
 
  inline auto getPiolaScalePtr() {
    return boost::shared_ptr<double>(shared_from_this(), &piolaScale);
  }
 
  inline MatrixPtr getApproxSigmaAtPts() {
    return boost::shared_ptr<MatrixDouble>(shared_from_this(),
                                           &approxSigmaAtPts);
  }
  inline MatrixPtr getApproxPAtPts() {
    return boost::shared_ptr<MatrixDouble>(shared_from_this(), &approxPAtPts);
  }
 
  inline MatrixPtr getDivPAtPts() {
    return boost::shared_ptr<MatrixDouble>(shared_from_this(), &divPAtPts);
  }
 
  inline MatrixPtr getDivSigmaAtPts() {
    return boost::shared_ptr<MatrixDouble>(shared_from_this(), &divSigmaAtPts);
  }
 
  inline MatrixPtr getSmallWL2AtPts() {
    return boost::shared_ptr<MatrixDouble>(shared_from_this(), &wL2AtPts);
  }
 
  inline MatrixPtr getSmallWL2DotAtPts() {
    return boost::shared_ptr<MatrixDouble>(shared_from_this(), &wL2DotAtPts);
  }
 
  inline MatrixPtr getSmallWL2DotDotAtPts() {
    return boost::shared_ptr<MatrixDouble>(shared_from_this(), &wL2DotDotAtPts);
  }
 
  inline MatrixPtr getLogStretchTensorAtPts() {
    return boost::shared_ptr<MatrixDouble>(shared_from_this(),
                                           &logStretchTensorAtPts);
  }
 
  inline MatrixPtr getStretchTensorAtPts() {
    return boost::shared_ptr<MatrixDouble>(shared_from_this(),
                                           &stretchTensorAtPts);
  }
 
  inline MatrixPtr getLogStretchDotTensorAtPts() {
    return boost::shared_ptr<MatrixDouble>(shared_from_this(),
                                           &logStretchDotTensorAtPts);
  }
 
  inline MatrixPtr getGradLogStretchDotTensorAtPts() {
    return boost::shared_ptr<MatrixDouble>(shared_from_this(),
                                           &gradLogStretchDotTensorAtPts);
  }
 
  inline MatrixPtr getRotAxisAtPts() {
    return boost::shared_ptr<MatrixDouble>(shared_from_this(), &rotAxisAtPts);
  }
 
  inline MatrixPtr getRotAxis0AtPts() {
    return boost::shared_ptr<MatrixDouble>(shared_from_this(), &rotAxis0AtPts);
  }
 
  inline MatrixPtr getRotAxisDotAtPts() {
    return boost::shared_ptr<MatrixDouble>(shared_from_this(),
                                           &rotAxisDotAtPts);
  }
 
  inline MatrixPtr getRotAxisGradDotAtPts() {
    return boost::shared_ptr<MatrixDouble>(shared_from_this(),
                                           &rotAxisGradDotAtPts);
  }
 
  inline MatrixPtr getBigGAtPts() {
    return boost::shared_ptr<MatrixDouble>(shared_from_this(), &GAtPts);
  }
 
  inline MatrixPtr getBigG0AtPts() {
    return boost::shared_ptr<MatrixDouble>(shared_from_this(), &GAtPts);
  }
 
  inline MatrixPtr getMatDPtr() {
    return boost::shared_ptr<MatrixDouble>(shared_from_this(), &matD);
  }
 
  inline MatrixPtr getMatInvDPtr() {
    return boost::shared_ptr<MatrixDouble>(shared_from_this(), &matInvD);
  }
 
  inline MatrixPtr getMatAxiatorDPtr() {
    return boost::shared_ptr<MatrixDouble>(shared_from_this(), &matAxiatorD);
  }
 
  inline MatrixPtr getMatDeviatorDPtr() {
    return boost::shared_ptr<MatrixDouble>(shared_from_this(), &matDeviatorD);
  }
 
  inline MatrixPtr getSmallWH1AtPts() {
    return boost::shared_ptr<MatrixDouble>(shared_from_this(), &wH1AtPts);
  }
 
  inline MatrixPtr getLargeXH1AtPts() {
    return boost::shared_ptr<MatrixDouble>(shared_from_this(), &XH1AtPts);
  }
 
  inline MatrixPtr getContactL2AtPts() {
    return boost::shared_ptr<MatrixDouble>(shared_from_this(), &contactL2AtPts);
  }
 
  inline MatrixPtr getSmallWGradH1AtPts() {
    return boost::shared_ptr<MatrixDouble>(shared_from_this(), &wGradH1AtPts);
  }
 
  inline VectorPtr getJacobianAtPts() {
    return boost::shared_ptr<VectorDouble>(shared_from_this(), &jacobianAtPts);
  }
 
  inline MatrixPtr getLeviKirchhoffAtPts() {
    return boost::shared_ptr<MatrixDouble>(shared_from_this(),
                                           &leviKirchhoffAtPts);
  };
 
  inline MatrixPtr getVarRotAxisPts() {
    return boost::shared_ptr<MatrixDouble>(shared_from_this(), &varRotAxis);
  }
 
  inline MatrixPtr getVarLogStreachPts() {
    return boost::shared_ptr<MatrixDouble>(shared_from_this(), &varLogStreach);
  }
 
  inline MatrixPtr getVarPiolaPts() {
    return boost::shared_ptr<MatrixDouble>(shared_from_this(), &varPiola);
  }
 
  inline MatrixPtr getDivVarPiolaPts() {
    return boost::shared_ptr<MatrixDouble>(shared_from_this(), &varDivPiola);
  }
 
  inline MatrixPtr getVarWL2Pts() {
    return boost::shared_ptr<MatrixDouble>(shared_from_this(), &varWL2);
  }
 
  inline MatrixPtr getInternalStressAtPts() {
    return boost::shared_ptr<MatrixDouble>(shared_from_this(),
                                           &internalStressAtPts);
  }
 
  inline MatrixPtr getFacePiolaAtPts() {
    return boost::shared_ptr<MatrixDouble>(shared_from_this(), &facePiolaAtPts);
  }
 
  inline MatrixPtr getGradHybridDispAtPts() {
    return boost::shared_ptr<MatrixDouble>(shared_from_this(),
                                           &gradHybridDispAtPts);
  }
 
  inline MatrixPtr getEigenValsAtPts() {
    return boost::shared_ptr<MatrixDouble>(shared_from_this(), &eigenVals);
  } 
 
  boost::shared_ptr<PhysicalEquations> physicsPtr;
};
 
struct OpJacobian;
 
// Forward declarations
struct ExternalStrain;
using ExternalStrainVec = std::vector<ExternalStrain>;
struct PhysicalEquations {
 
  typedef FTensor::Tensor1<adouble, 3> ATensor1;
  typedef FTensor::Tensor2<adouble, 3, 3> ATensor2;
  typedef FTensor::Tensor3<adouble, 3, 3, 3> ATensor3;
  typedef FTensor::Tensor1<double, 3> DTensor1;
  typedef FTensor::Tensor2<double, 3, 3> DTensor2;
  typedef FTensor::Tensor3<double, 3, 3, 3> DTensor3;
 
  typedef FTensor::Tensor0<FTensor::PackPtr<double *, 1>> DTensor0Ptr;
 
  typedef FTensor::Tensor2<FTensor::PackPtr<double *, 1>, 3, 3> DTensor2Ptr;
  typedef FTensor::Tensor3<FTensor::PackPtr<double *, 1>, 3, 3, 3> DTensor3Ptr;
 
  PhysicalEquations() = delete;
  PhysicalEquations(const int size_active, const int size_dependent)
      : activeVariables(size_active, 0),
        dependentVariablesPiola(size_dependent, 0),
        dependentVariablesPiolaDirevatives(size_dependent * size_active, 0) {}
  virtual ~PhysicalEquations() = default;
 
  virtual MoFEMErrorCode recordTape(const int tag, DTensor2Ptr *t_h) = 0;
 
  virtual UserDataOperator *
  returnOpJacobian(const int tag, const bool eval_rhs, const bool eval_lhs,
                   boost::shared_ptr<DataAtIntegrationPts> data_ptr,
                   boost::shared_ptr<PhysicalEquations> physics_ptr);
 
  virtual VolUserDataOperator *
  returnOpSpatialPhysical(const std::string &field_name,
                          boost::shared_ptr<DataAtIntegrationPts> data_ptr,
                          const double alpha_u);
 
  virtual VolUserDataOperator *
    returnOpSpatialPhysicalExternalStrain(
      const std::string &field_name,
      boost::shared_ptr<DataAtIntegrationPts> data_ptr,
      boost::shared_ptr<ExternalStrainVec> external_strain_vec_ptr,
      std::map<std::string, boost::shared_ptr<ScalingMethod>> smv);
 
  virtual VolUserDataOperator *returnOpSpatialPhysical_du_du(
      std::string row_field, std::string col_field,
      boost::shared_ptr<DataAtIntegrationPts> data_ptr, const double alpha);
 
  virtual VolUserDataOperator *
  returnOpCalculateEnergy(boost::shared_ptr<DataAtIntegrationPts> data_ptr,
                          boost::shared_ptr<double> total_energy_ptr);
 
  virtual VolUserDataOperator *returnOpCalculateStretchFromStress(
      boost::shared_ptr<DataAtIntegrationPts> data_ptr,
      boost::shared_ptr<PhysicalEquations> physics_ptr);
 
  virtual VolUserDataOperator *returnOpCalculateVarStretchFromStress(
      boost::shared_ptr<DataAtIntegrationPts> data_ptr,
      boost::shared_ptr<PhysicalEquations> physics_ptr);
 
  virtual VolUserDataOperator *
  returnOpSetScale(boost::shared_ptr<double> scale_ptr,
                   boost::shared_ptr<PhysicalEquations> physics_ptr);
 
  std::vector<double> activeVariables;
  std::vector<double> dependentVariablesPiola;
  std::vector<double> dependentVariablesPiolaDirevatives;
 
  /** \name Active variables */
 
  /**@{*/
 
  template <int S>
  inline static DTensor2Ptr get_VecTensor2(std::vector<double> &v) {
    return DTensor2Ptr(&v[S + 0], &v[S + 1], &v[S + 2], &v[S + 3], &v[S + 4],
                       &v[S + 5], &v[S + 6], &v[S + 7], &v[S + 8]);
  }
 
  template <int S>
  inline static DTensor0Ptr get_VecTensor0(std::vector<double> &v) {
    return DTensor0Ptr(&v[S + 0]);
  }
 
  template <int S0>
  inline static DTensor3Ptr get_vecTensor3(std::vector<double> &v,
                                           const int nba) {
 
    const int A00 = nba * 0 + S0;
    const int A01 = nba * 1 + S0;
    const int A02 = nba * 2 + S0;
    const int A10 = nba * 3 + S0;
    const int A11 = nba * 4 + S0;
    const int A12 = nba * 5 + S0;
    const int A20 = nba * 6 + S0;
    const int A21 = nba * 7 + S0;
    const int A22 = nba * 8 + S0;
 
    return DTensor3Ptr(
 
        &v[A00 + 0], &v[A00 + 1], &v[A00 + 2], &v[A01 + 0], &v[A01 + 1],
        &v[A01 + 2], &v[A02 + 0], &v[A02 + 1], &v[A02 + 2],
 
        &v[A10 + 0], &v[A10 + 1], &v[A10 + 2], &v[A11 + 0], &v[A11 + 1],
        &v[A11 + 2], &v[A12 + 0], &v[A12 + 1], &v[A12 + 2],
 
        &v[A20 + 0], &v[A20 + 1], &v[A20 + 2], &v[A21 + 0], &v[A21 + 1],
        &v[A21 + 2], &v[A22 + 0], &v[A22 + 1], &v[A22 + 2]
 
    );
  }
 
  /**@}*/
 
  /** \name Active variables */
 
  /**@{*/
 
  inline DTensor2Ptr get_h() { return get_VecTensor2<0>(activeVariables); }
 
  /**@}*/
 
  /** \name Dependent variables */
 
  /**@{*/
 
  inline DTensor2Ptr get_P() {
    return get_VecTensor2<0>(dependentVariablesPiola);
  }
 
  /**@}*/
 
  /** \name Derivatives of dependent variables */
 
  /**@{*/
 
  inline DTensor3Ptr get_P_dh0() {
    return get_vecTensor3<0>(dependentVariablesPiolaDirevatives,
                             activeVariables.size());
  }
  inline DTensor3Ptr get_P_dh1() {
    return get_vecTensor3<3>(dependentVariablesPiolaDirevatives,
                             activeVariables.size());
  }
  inline DTensor3Ptr get_P_dh2() {
    return get_vecTensor3<6>(dependentVariablesPiolaDirevatives,
                             activeVariables.size());
  }
 
  /**@}*/
};
 
struct BcDisp {
  BcDisp(std::string name, std::vector<double> attr, Range faces);
  std::string blockName;
  Range faces;
  VectorDouble3 vals;
  VectorInt3 flags;
};
using BcDispVec = std::vector<BcDisp>;
 
struct BcRot {
  BcRot(std::string name, std::vector<double> attr, Range faces);
  std::string blockName;
  Range faces;
  VectorDouble vals;
  double theta;
};
using BcRotVec = std::vector<BcRot>;
 
typedef std::vector<Range> TractionFreeBc;
 
struct TractionBc {
  TractionBc(std::string name, std::vector<double> attr, Range faces);
  std::string blockName;
  Range faces;
  VectorDouble3 vals;
  VectorInt3 flags;
};
using TractionBcVec = std::vector<TractionBc>;
 
struct NormalDisplacementBc {
  NormalDisplacementBc(std::string name, std::vector<double> attr, Range faces);
  std::string blockName;
  Range faces;
  double val;
};
using NormalDisplacementBcVec = std::vector<NormalDisplacementBc>;
 
struct AnalyticalDisplacementBc {
  AnalyticalDisplacementBc(std::string name, std::vector<double> attr,
                           Range faces);
  std::string blockName;
  Range faces;
  VectorInt3 flags;
};
using AnalyticalDisplacementBcVec = std::vector<AnalyticalDisplacementBc>;
 
struct AnalyticalTractionBc {
  AnalyticalTractionBc(std::string name, std::vector<double> attr, Range faces);
  std::string blockName;
  Range faces;
  VectorInt3 flags;
};
using AnalyticalTractionBcVec = std::vector<AnalyticalTractionBc>;
 
struct PressureBc {
  PressureBc(std::string name, std::vector<double> attr, Range faces);
  std::string blockName;
  Range faces;
  double val;
};
using PressureBcVec = std::vector<PressureBc>;
 
struct ExternalStrain {
  ExternalStrain(std::string name, std::vector<double> attr, Range ents);
  std::string blockName;
  Range ents;
  double val;
  double bulkModulusK;
};
 
  #ifdef ENABLE_PYTHON_BINDING
struct AnalyticalExprPython {
  AnalyticalExprPython() = default;
  virtual ~AnalyticalExprPython() = default;
 
  MoFEMErrorCode analyticalExprInit(const std::string py_file);
  MoFEMErrorCode evalAnalyticalDisp(double delta_t, double t, np::ndarray x,
                                    np::ndarray y, np::ndarray z,
                                    np::ndarray nx, np::ndarray ny,
                                    np::ndarray nz,
                                    const std::string &block_name,
                                    np::ndarray &analytical_expr);
  MoFEMErrorCode evalAnalyticalTraction(double delta_t, double t, np::ndarray x,
                                        np::ndarray y, np::ndarray z,
                                        np::ndarray nx, np::ndarray ny,
                                        np::ndarray nz,
                                        const std::string &block_name,
                                        np::ndarray &analytical_expr);
 
  template <typename T>
  inline std::vector<T>
  py_list_to_std_vector(const boost::python::object &iterable) {
    return std::vector<T>(boost::python::stl_input_iterator<T>(iterable),
                          boost::python::stl_input_iterator<T>());
  }
 
private:
  bp::object mainNamespace;
  bp::object analyticalDispFun;
  bp::object analyticalTractionFun;
};
 
extern boost::weak_ptr<AnalyticalExprPython> AnalyticalExprPythonWeakPtr;
  #endif
 
  #include "EshelbianCore.hpp"
  #include "EshelbianOperators.hpp"
 
} // namespace EshelbianPlasticity
 
#endif //__ESHELBIAN_PLASTICITY_HPP__r all int␑<
 

Member Function Documentation

◆ integrate()

MoFEMErrorCode OpSpatialPhysical_du_dBubble::integrate	(	EntData &	row_data,
		EntData &	col_data )

virtual

Reimplemented from EshelbianPlasticity::OpAssembleBasic< VolUserDataOperator >.

Examples: EshelbianOperators.cpp.

Definition at line 2424 of file EshelbianOperators.cpp.

                                                                          {
  MoFEMFunctionBegin;
 
  FTENSOR_INDEX(SPACE_DIM, i);
  FTENSOR_INDEX(SPACE_DIM, j);
  FTENSOR_INDEX(SPACE_DIM, k);
  FTENSOR_INDEX(SPACE_DIM, l);
  FTENSOR_INDEX(size_symm, L) L;
 
  int nb_integration_pts = row_data.getN().size1();
  int row_nb_dofs = row_data.getIndices().size();
  int col_nb_dofs = col_data.getIndices().size();
  auto get_ftensor2 = [](MatrixDouble &m, const int r, const int c) {
    return FTensor::Tensor1<FTensor::PackPtr<double *, 1>, size_symm>(
        &m(r + 0, c), &m(r + 1, c), &m(r + 2, c), &m(r + 3, c), &m(r + 4, c),
        &m(r + 5, c));
  };
 
  auto v = getVolume();
  auto t_w = getFTensor0IntegrationWeight();
  auto t_row_base_fun = row_data.getFTensor0N();
 
  int row_nb_base_functions = row_data.getN().size2();
 
  auto t_approx_P_adjoint_log_du_dP =
      getFTensor3FromMat<3, 3, size_symm>(dataAtPts->adjointPdUdPAtPts);
 
  for (int gg = 0; gg != nb_integration_pts; ++gg) {
    double a = v * t_w;
    int rr = 0;
    for (; rr != row_nb_dofs / 6; ++rr) {
      auto t_m = get_ftensor2(K, 6 * rr, 0);
      auto t_col_base_fun = col_data.getFTensor2N<3, 3>(gg, 0);
      for (int cc = 0; cc != col_nb_dofs; ++cc) {
        t_m(L) -=
            a * (t_approx_P_adjoint_log_du_dP(i, j, L) * t_col_base_fun(i, j)) *
            t_row_base_fun;
        ++t_m;
        ++t_col_base_fun;
      }
      ++t_row_base_fun;
    }
    for (; rr != row_nb_base_functions; ++rr)
      ++t_row_base_fun;
    ++t_w;
    ++t_approx_P_adjoint_log_du_dP;
  }
  MoFEMFunctionReturn(0);
}

The documentation for this struct was generated from the following files:

users_modules/eshelbian_plasticity/src/EshelbianPlasticity.hpp
users_modules/eshelbian_plasticity/src/impl/EshelbianOperators.cpp

Public Member Functions

Additional Inherited Members

Detailed Description

Constructor & Destructor Documentation

◆ OpSpatialPhysical_du_dBubble()

Member Function Documentation

◆ integrate()