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SetUpSchurImpl.cpp
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1/** @file SetUpSchurImpl
2 * @brief
3 * @date 2023-05-13
4 *
5 * @license{This project is released under the MIT License.}
6 *
7 */
8
10
12 : SetUpSchur(), mField(m_field), epCorePtr(ep_core_ptr) {}
13 virtual ~SetUpSchurImpl() {}
14
18
19private:
22
25
26 boost::shared_ptr<std::vector<boost::weak_ptr<NumeredDofEntity>>>
27 piolaZeroDofsVec; //< Dofs on crack surface
28 boost::shared_ptr<std::vector<unsigned char>>
29 piolaZeroDofsMarker; //< marker for crack dofs on surface
30
50
51 boost::shared_ptr<P_MultiGridData> pMGPtr;
52
54 std::vector<std::string> schur_field_list{epCorePtr->hybridSpatialDisp,
56 std::vector<boost::shared_ptr<Range>> dm_range_list{nullptr, nullptr};
57 return std::make_pair(schur_field_list, dm_range_list);
58 };
59
60 auto getA00Fields() {
61 auto a00_field_list =
62 epCorePtr->physicalEquations->getMaterialFields(*epCorePtr);
63 for (const auto &field : {epCorePtr->bubbleField, epCorePtr->piolaStress,
65 if (mField.check_field(field))
66 a00_field_list.push_back(field);
67 std::vector<boost::shared_ptr<Range>> range_list_ptr(a00_field_list.size(),
68 nullptr);
69 return std::make_pair(a00_field_list, range_list_ptr);
70 }
71};
72
75
76 auto create_schur_dm = [&](SmartPetscObj<DM> &dm_sub) {
78
79 dm_sub = createDM(mField.get_comm(), "DMMOFEM_MG");
80 CHKERR DMMoFEMCreateSubDM(dm_sub, epCorePtr->dmElastic, "SUB_SCHUR");
81 CHKERR DMMoFEMSetSquareProblem(dm_sub, PETSC_TRUE);
82 CHKERR DMMoFEMSetIsPartitioned(dm_sub, PETSC_TRUE);
85
86 int r_idx = 0;
87 auto [schur_field_list, schur_range_list] = getSchurFields();
88 for (auto f : schur_field_list) {
89 MOFEM_LOG("EP", Sev::inform) << "Add schur field: " << f;
90 CHKERR DMMoFEMAddSubFieldRow(dm_sub, f, schur_range_list[r_idx]);
91 CHKERR DMMoFEMAddSubFieldCol(dm_sub, f, schur_range_list[r_idx]);
92 ++r_idx;
93 }
94 CHKERR DMSetUp(dm_sub);
96 };
97
98 auto create_a00_dm = [&](SmartPetscObj<DM> &dm_sub) {
100 dm_sub = createDM(mField.get_comm(), "DMMOFEM");
101 CHKERR DMMoFEMCreateSubDM(dm_sub, epCorePtr->dmElastic, "SUB_A00");
102 CHKERR DMMoFEMSetSquareProblem(dm_sub, PETSC_TRUE);
103 CHKERR DMMoFEMSetIsPartitioned(dm_sub, PETSC_TRUE);
107
108 int r_idx = 0;
109 auto [a00_field_list, a00_range_list] = getA00Fields();
110 for (auto f : a00_field_list) {
111 MOFEM_LOG("EP", Sev::inform) << "Add a00 field: " << f;
112 CHKERR DMMoFEMAddSubFieldRow(dm_sub, f, a00_range_list[r_idx]);
113 CHKERR DMMoFEMAddSubFieldCol(dm_sub, f, a00_range_list[r_idx]);
114 ++r_idx;
115 }
116 CHKERR DMSetUp(dm_sub);
118 };
119
120 auto get_snes = [&](TS ts) {
121 SNES snes;
122 CHKERR TSGetSNES(ts, &snes);
123 return snes;
124 };
125
126 auto get_ksp = [&](SNES snes) {
127 KSP ksp;
128 CHKERR SNESGetKSP(snes, &ksp);
129 CHKERR KSPSetFromOptions(ksp);
130 return ksp;
131 };
132
133 auto get_pc = [&](KSP ksp) {
134 PC pc;
135 CHKERR KSPGetPC(ksp, &pc);
136 return pc;
137 };
138
139 auto ksp = get_ksp(get_snes(ts));
140 auto pc = get_pc(ksp);
141
142 PetscBool is_pcfs = PETSC_FALSE;
143 PetscObjectTypeCompare((PetscObject)pc, PCFIELDSPLIT, &is_pcfs);
144 if (is_pcfs) {
145
146 MOFEM_LOG("EP", Sev::inform) << "SetUpSchurImpl::setUp: PCFIELDSPLIT";
147
148 SmartPetscObj<DM> schur_dm, a00_dm;
149 CHKERR create_schur_dm(schur_dm);
150 CHKERR create_a00_dm(a00_dm);
151
152 auto dm_elastic = epCorePtr->dmElastic;
153 auto vol_elem_name = epCorePtr->elementVolumeName;
154 auto skel_elem_name = epCorePtr->skeletonElement;
155 auto contact_elem_name = epCorePtr->contactElement;
156 auto natural_bc_element_name = epCorePtr->naturalBcElement;
157
158 std::vector<std::pair<std::string, std::string>> mat_block_list = {
159
168
169 };
170
171 mat_block_list.push_back({epCorePtr->rotAxis, epCorePtr->rotAxis});
172 auto add_pair = [&](const std::string &row, const std::string &col) {
173 if (mField.check_field(row) && mField.check_field(col)) {
174 mat_block_list.emplace_back(row, col);
175 if (row != col)
176 mat_block_list.emplace_back(col, row);
177 }
178 };
179 for (const auto &[row, col] :
180 epCorePtr->physicalEquations->getMaterialCouplings(*epCorePtr))
181 add_pair(row, col);
182
183 auto get_nested_mat_data = [&](auto schur_dm, auto block_dm) {
184 auto block_mat_data = createBlockMatStructure(
185 dm_elastic,
186
187 {
188
189 {vol_elem_name, mat_block_list},
190
191 {skel_elem_name,
192
193 {
194
200
201 }},
202
203 {contact_elem_name,
204
205 {
206
212
213 }},
214
215 {natural_bc_element_name,
216
217 {
218
222
223 }}
224
225 }
226
227 );
228
229 auto [a00_field_list, a00_range_list] = getA00Fields();
230
232
233 {schur_dm, a00_dm}, block_mat_data,
234
235 a00_field_list,
236
237 a00_range_list,
238
239 false
240
241 );
242 };
243
244 auto nested_mat_data = get_nested_mat_data(schur_dm, a00_dm);
246 CHKERR DMSetMatType(epCorePtr->dmElastic, MATSHELL);
247
250
251 if (std::abs(epCorePtr->alphaRho) >
252 std::numeric_limits<double>::epsilon()) {
253 auto swap_assemble = [](TS ts, PetscReal t, Vec u, Vec u_t, Vec utt,
254 PetscReal a, PetscReal aa, Mat A, Mat B,
255 void *ctx) {
256 return TsSetI2Jacobian(ts, t, u, u_t, utt, a, aa, B, A, ctx);
257 };
258 auto ts_ctx_ptr = getDMTsCtx(epCorePtr->dmElastic);
259 CHKERR TSSetI2Jacobian(ts, m, p, swap_assemble, ts_ctx_ptr.get());
260 } else {
261 auto swap_assemble = [](TS ts, PetscReal t, Vec u, Vec u_t, PetscReal a,
262 Mat A, Mat B, void *ctx) {
263 return TsSetIJacobian(ts, t, u, u_t, a, B, A, ctx);
264 };
265 auto ts_ctx_ptr = getDMTsCtx(epCorePtr->dmElastic);
266 CHKERR TSSetIJacobian(ts, m, p, swap_assemble, ts_ctx_ptr.get());
267 }
268 CHKERR KSPSetOperators(ksp, m, p);
269
270 auto set_assembly = [&]() {
272
273 aoS = getDMSubData(schur_dm)->getSmartRowMap();
274 S = createDMHybridisedL2Matrix(schur_dm);
275 auto set_block_size = [&]<FieldApproximationBase Base>() {
278 CHKERR MatSetBlockSize(
279 S, SPACE_DIM * NBFACETRI_L2(Orders::hybrid(epCorePtr->spaceOrder)));
281 };
282 CHKERR epCorePtr->withFieldOrders(set_block_size);
283 epCorePtr->S = S;
284 epCorePtr->aoS = aoS;
285
286 auto set_assemble = [&]() {
288 auto schur_asmb_pre_proc_lhs = boost::make_shared<FEMethod>();
289 auto schur_asmb_pre_proc_rhs = boost::make_shared<FEMethod>();
290
291 schur_asmb_pre_proc_lhs->preProcessHook = [this]() {
293 CHKERR MatZeroEntries(S);
295 };
296
297 auto *schur_asmb_pre_proc_rhs_ptr = schur_asmb_pre_proc_rhs.get();
298 schur_asmb_pre_proc_rhs->preProcessHook =
299 [this, schur_asmb_pre_proc_rhs_ptr]() {
301 auto prb_ptr = schur_asmb_pre_proc_rhs_ptr->problemPtr;
302 auto dofs_prb = prb_ptr->getNumeredRowDofsPtr();
303
304 auto crack_faces = epCorePtr->crackFaces;
305 piolaZeroDofsVec->clear();
306 CHKERR mField.getInterface<ProblemsManager>()
307 ->getSideDofsOnBrokenSpaceEntities(
308 *piolaZeroDofsVec, prb_ptr->getName(), ROW,
309 epCorePtr->piolaStress, *crack_faces, SPACE_DIM, 0,
310 SPACE_DIM);
311
312 piolaZeroDofsMarker->resize(dofs_prb->size(), 0);
313 piolaZeroDofsMarker->clear();
314 for (auto &dof : *piolaZeroDofsVec) {
315 if (auto dof_ptr = dof.lock()) {
316 auto idx = dof_ptr->getPetscLocalDofIdx();
317 (*piolaZeroDofsMarker)[idx] = 1;
318 }
319 }
320 // FIXME: This needs investigation, true is required for fracture
321 constexpr bool hard_coded_set_bc_debug = true;
322 if constexpr (hard_coded_set_bc_debug) {
323
324 auto problem_name =
325 schur_asmb_pre_proc_rhs_ptr->problemPtr->getName();
326 auto crack_faces = epCorePtr->crackFaces;
327
328 SmartPetscObj<IS> crack_hybrid_is;
329 CHKERR epCorePtr->mField.getInterface<ISManager>()
330 ->isCreateProblemFieldAndRankLocal(
331 problem_name, ROW, epCorePtr->hybridSpatialDisp, 0,
332 SPACE_DIM, crack_hybrid_is, &*crack_faces);
333
334 SmartPetscObj<IS> crack_piola_is;
335 CHKERR epCorePtr->mField.getInterface<ISManager>()
336 ->isCreateProblemBrokenFieldAndRankLocal(*piolaZeroDofsVec,
337 crack_piola_is);
338
339 const double *a_x;
340 CHKERR VecGetArrayRead(schur_asmb_pre_proc_rhs_ptr->x, &a_x);
341 auto zero_by_is = [&](auto is) {
343 const PetscInt *is_array;
344 PetscInt is_size;
345 CHKERR ISGetLocalSize(is, &is_size);
346 CHKERR ISGetIndices(is, &is_array);
347 for (int i = 0; i != is_size; ++i) {
348 // FIXME: That is irregular, need investigate if needed
349 const_cast<double *>(a_x)[is_array[i]] = 0;
350 }
351 CHKERR ISRestoreIndices(is, &is_array);
353 };
354
355 CHKERR zero_by_is(crack_hybrid_is);
356 CHKERR zero_by_is(crack_piola_is);
357
358 CHKERR VecRestoreArrayRead(schur_asmb_pre_proc_rhs_ptr->x,
359 &a_x);
360
361 CHKERR epCorePtr->mField.getInterface<VecManager>()
362 ->setLocalGhostVector(problem_name, COL,
363 schur_asmb_pre_proc_rhs_ptr->x,
364 INSERT_VALUES, SCATTER_REVERSE);
365 }
366
368 };
369
370 auto schur_asmb_post_proc_lhs = boost::make_shared<FEMethod>();
371 auto schur_asmb_post_proc_rhs = boost::make_shared<FEMethod>();
372
373 auto schur_asmb_post_proc_rhs_weak_ptr =
374 boost::weak_ptr<FEMethod>(schur_asmb_post_proc_rhs);
375 schur_asmb_post_proc_rhs->postProcessHook =
376 [this, schur_asmb_post_proc_rhs_weak_ptr]() {
378
379 if (auto schur_asmb_post_proc_rhs_ptr =
380 schur_asmb_post_proc_rhs_weak_ptr.lock()) {
381
382 CHKERR VecGhostUpdateBegin(schur_asmb_post_proc_rhs_ptr->f,
383 ADD_VALUES, SCATTER_REVERSE);
384 CHKERR VecGhostUpdateEnd(schur_asmb_post_proc_rhs_ptr->f,
385 ADD_VALUES, SCATTER_REVERSE);
386 CHKERR VecAssemblyBegin(schur_asmb_post_proc_rhs_ptr->f);
387 CHKERR VecAssemblyEnd(schur_asmb_post_proc_rhs_ptr->f);
388 *(schur_asmb_post_proc_rhs_ptr->vecAssembleSwitch) = false;
389
390 {
391
392 auto problem_name =
393 schur_asmb_post_proc_rhs_ptr->problemPtr->getName();
394
395 auto crack_faces = epCorePtr->crackFaces;
396
397 SmartPetscObj<IS> crack_hybrid_is;
398 CHKERR epCorePtr->mField.getInterface<ISManager>()
399 ->isCreateProblemFieldAndRankLocal(
400 problem_name, ROW, epCorePtr->hybridSpatialDisp, 0,
401 SPACE_DIM, crack_hybrid_is, &*crack_faces);
402
403 SmartPetscObj<IS> crack_piola_is;
404 CHKERR epCorePtr->mField.getInterface<ISManager>()
405 ->isCreateProblemBrokenFieldAndRankLocal(
406 *piolaZeroDofsVec, crack_piola_is);
407
408 double *a_f;
409 CHKERR VecGetArray(schur_asmb_post_proc_rhs_ptr->f, &a_f);
410 const double *a_x;
411 CHKERR VecGetArrayRead(schur_asmb_post_proc_rhs_ptr->x, &a_x);
412 auto zero_by_is = [&](auto is) {
414 const PetscInt *is_array;
415 PetscInt is_size;
416 CHKERR ISGetLocalSize(is, &is_size);
417 CHKERR ISGetIndices(is, &is_array);
418 for (int i = 0; i != is_size; ++i) {
419 a_f[is_array[i]] = -a_x[is_array[i]];
420 }
421 CHKERR ISRestoreIndices(is, &is_array);
423 };
424
425 CHKERR zero_by_is(crack_hybrid_is);
426 CHKERR zero_by_is(crack_piola_is);
427
428 CHKERR VecRestoreArray(schur_asmb_post_proc_rhs_ptr->f, &a_f);
429 CHKERR VecRestoreArrayRead(schur_asmb_post_proc_rhs_ptr->x,
430 &a_x);
431 }
432
433 } else {
434 SETERRQ(PETSC_COMM_SELF, PETSC_ERR_PLIB,
435 "schur_asmb_post_proc_rhs is expired");
436 }
437
439 };
440
441 auto schur_asmb_post_proc_lhs_weak_ptr =
442 boost::weak_ptr<FEMethod>(schur_asmb_post_proc_lhs);
443 schur_asmb_post_proc_lhs->postProcessHook =
444 [this, schur_asmb_post_proc_lhs_weak_ptr]() {
446
447 if (auto schur_asmb_post_proc_lhs_ptr =
448 schur_asmb_post_proc_lhs_weak_ptr.lock()) {
449
450 if (pMGPtr) {
451 CHKERR pMGPtr->setUP();
452 pMGPtr.reset();
453 }
454
455 auto crack_faces = epCorePtr->crackFaces;
456
457 // Assemble matrix
458 CHKERR MatAssemblyBegin(schur_asmb_post_proc_lhs_ptr->B,
459 MAT_FINAL_ASSEMBLY);
460 CHKERR MatAssemblyEnd(schur_asmb_post_proc_lhs_ptr->B,
461 MAT_FINAL_ASSEMBLY);
462 *(schur_asmb_post_proc_lhs_ptr->matAssembleSwitch) = false;
463 {
464 SmartPetscObj<IS> crack_hybrid_is;
465 CHKERR epCorePtr->mField.getInterface<ISManager>()
466 ->isCreateProblemFieldAndRank(
467 "ELASTIC_PROBLEM", ROW, epCorePtr->hybridSpatialDisp,
468 0, SPACE_DIM, crack_hybrid_is, &*crack_faces);
469 CHKERR MatZeroRowsColumnsIS(schur_asmb_post_proc_lhs_ptr->B,
470 crack_hybrid_is, 1, PETSC_NULLPTR,
471 PETSC_NULLPTR);
472 }
473 {
474 SmartPetscObj<IS> crack_piola_is;
475 CHKERR epCorePtr->mField.getInterface<ISManager>()
476 ->isCreateProblemBrokenFieldAndRank(*piolaZeroDofsVec,
477 crack_piola_is);
478 CHKERR MatZeroRowsColumnsIS(schur_asmb_post_proc_lhs_ptr->B,
479 crack_piola_is, 1, PETSC_NULLPTR,
480 PETSC_NULLPTR);
481 }
482
483 auto [a00_field_list, a00_range_list] = getA00Fields();
485 epCorePtr->mField, schur_asmb_post_proc_lhs_ptr->B, S,
486 a00_field_list, a00_range_list, aoS);
487 epCorePtr->a00FieldList = a00_field_list;
488 epCorePtr->a00RangeList = a00_range_list;
489
490 // Apply essential constrains to Schur complement
491 CHKERR MatAssemblyBegin(S, MAT_FINAL_ASSEMBLY);
492 CHKERR MatAssemblyEnd(S, MAT_FINAL_ASSEMBLY);
493
494 SmartPetscObj<IS> crack_hybrid_is;
495 CHKERR epCorePtr->mField.getInterface<ISManager>()
496 ->isCreateProblemFieldAndRank(
497 "SUB_SCHUR", ROW, epCorePtr->hybridSpatialDisp, 0,
498 SPACE_DIM, crack_hybrid_is, &*crack_faces);
499 epCorePtr->crackHybridIs = crack_hybrid_is;
500 CHKERR MatZeroRowsColumnsIS(S, crack_hybrid_is, 1,
501 PETSC_NULLPTR, PETSC_NULLPTR);
502
503 } else {
504 SETERRQ(PETSC_COMM_SELF, PETSC_ERR_PLIB,
505 "schur_asmb_post_proc_lhs is expired");
506 }
507
509 };
510
511 auto ts_ctx_ptr = getDMTsCtx(epCorePtr->dmElastic);
512 ts_ctx_ptr->getPreProcessIFunction().push_front(
513 schur_asmb_pre_proc_rhs);
514 ts_ctx_ptr->getPostProcessIFunction().push_back(
515 schur_asmb_post_proc_rhs);
516 ts_ctx_ptr->getPreProcessIJacobian().push_front(
517 schur_asmb_pre_proc_lhs);
518 ts_ctx_ptr->getPostProcessIJacobian().push_back(
519 schur_asmb_post_proc_lhs);
521 };
522
524 boost::make_shared<std::vector<boost::weak_ptr<NumeredDofEntity>>>();
525 piolaZeroDofsMarker = boost::make_shared<std::vector<unsigned char>>();
526 CHKERR set_assemble();
527
529 };
530
531 auto set_pc = [&]() {
533 auto a00_is = getDMSubData(a00_dm)->getSmartRowIs();
534 auto schur_is = getDMSubData(schur_dm)->getSmartRowIs();
535 CHKERR PCFieldSplitSetIS(pc, NULL, a00_is);
536 CHKERR PCFieldSplitSetIS(pc, NULL, schur_is);
537 CHKERR PCFieldSplitSetSchurPre(pc, PC_FIELDSPLIT_SCHUR_PRE_USER, S);
539 };
540
541 auto set_diagonal_pc = [&]() {
543 KSP *subksp;
544 CHKERR PCFieldSplitSchurGetSubKSP(pc, PETSC_NULLPTR, &subksp);
545 auto get_pc = [](auto ksp) {
546 PC pc_raw;
547 CHKERR KSPGetPC(ksp, &pc_raw);
548 return SmartPetscObj<PC>(pc_raw, true); // bump reference
549 };
550 CHKERR setSchurA00MatSolvePC(get_pc(subksp[0]));
551
552 auto set_pc_p_mg = [&](auto dm, auto pc, auto S) {
554 CHKERR PCSetDM(pc, dm);
555 PetscBool same = PETSC_FALSE;
556 PetscObjectTypeCompare((PetscObject)pc, PCMG, &same);
557 if (same) {
558 auto smart_pc = SmartPetscObj<PC>(pc, true);
559 pMGPtr = boost::make_shared<P_MultiGridData>(dm, smart_pc, S);
560 }
561 PetscObjectTypeCompare((PetscObject)pc, PCKSP, &same);
562 if (same) {
563 MOFEM_LOG("EP", Sev::inform)
564 << "SetUpSchurImpl::setUp: fieldsplit 1 PCKSP";
565 CHKERR PCSetFromOptions(pc);
566 KSP ksp;
567 CHKERR PCKSPGetKSP(pc, &ksp);
568 CHKERR KSPSetFromOptions(ksp);
569 PC ksp_pc;
570 CHKERR KSPGetPC(ksp, &ksp_pc);
571 CHKERR PCSetFromOptions(ksp_pc);
572 PetscObjectTypeCompare((PetscObject)ksp_pc, PCMG, &same);
573 if (same) {
574 auto smart_pc = SmartPetscObj<PC>(ksp_pc, true);
575 pMGPtr = boost::make_shared<P_MultiGridData>(dm, smart_pc, S);
576 }
577 }
579 };
580
581 CHKERR set_pc_p_mg(schur_dm, get_pc(subksp[1]), S);
582
583 CHKERR PetscFree(subksp);
585 };
586
587 CHKERR set_assembly();
588 CHKERR set_pc();
589 CHKERR TSSetUp(ts);
590 CHKERR KSPSetUp(ksp);
591 CHKERR set_diagonal_pc();
592
593 } else {
594 MOFEM_LOG("EP", Sev::inform) << "SetUpSchurImpl::setUp: PCLU or other";
595
597 // Plastic coupling may extend the elastic matrix graph on first assembly.
599 CHKERR MatSetOption(m, MAT_NEW_NONZERO_ALLOCATION_ERR, PETSC_FALSE);
600 auto ts_ctx_ptr = getDMTsCtx(epCorePtr->dmElastic);
601 CHKERR TSSetIJacobian(ts, m, m, TsSetIJacobian, ts_ctx_ptr.get());
602
603 epCorePtr->elasticFeLhs->getOpPtrVector().push_front(
605 epCorePtr->elasticFeLhs->getOpPtrVector().push_back(
607 epCorePtr->elasticBcLhs->getOpPtrVector().push_front(
609 epCorePtr->elasticBcLhs->getOpPtrVector().push_back(
611 }
612
614}
615
616boost::shared_ptr<EshelbianCore::SetUpSchur>
618 EshelbianCore *ep_core_ptr) {
619 return boost::shared_ptr<SetUpSchur>(
620 new SetUpSchurImpl(m_field, ep_core_ptr));
621}
constexpr double a
@ COL
@ ROW
FieldApproximationBase
approximation base
Definition definitions.h:58
#define MoFEMFunctionBegin
First executable line of each MoFEM function, used for error handling. Final line of MoFEM functions ...
#define MoFEMFunctionReturn(a)
Last executable line of each PETSc function used for error handling. Replaces return()
#define CHKERR
Inline error check.
PetscErrorCode DMMoFEMSetIsPartitioned(DM dm, PetscBool is_partitioned)
Definition DMMoFEM.cpp:1113
PetscErrorCode DMMoFEMCreateSubDM(DM subdm, DM dm, const char problem_name[])
Must be called by user to set Sub DM MoFEM data structures.
Definition DMMoFEM.cpp:215
PetscErrorCode DMMoFEMAddElement(DM dm, std::string fe_name)
add element to dm
Definition DMMoFEM.cpp:488
PetscErrorCode DMMoFEMSetSquareProblem(DM dm, PetscBool square_problem)
set squared problem
Definition DMMoFEM.cpp:450
PetscErrorCode DMMoFEMAddSubFieldRow(DM dm, const char field_name[])
Definition DMMoFEM.cpp:238
PetscErrorCode DMMoFEMAddSubFieldCol(DM dm, const char field_name[])
Definition DMMoFEM.cpp:280
auto createDMMatrix(DM dm)
Get smart matrix from DM.
Definition DMMoFEM.hpp:1194
virtual bool check_field(const std::string &name) const =0
check if field is in database
#define MOFEM_LOG(channel, severity)
Log.
#define NBFACETRI_L2(P)
Number of base functions on triangle for L2 space.
FTensor::Index< 'i', SPACE_DIM > i
const FTensor::Tensor2< T, Dim, Dim > Vec
PetscErrorCode MoFEMErrorCode
MoFEM/PETSc error code.
PetscErrorCode TsSetIJacobian(TS ts, PetscReal t, Vec u, Vec u_t, PetscReal a, Mat A, Mat B, void *ctx)
Set function evaluating jacobian in TS solver.
Definition TsCtx.cpp:169
auto getDMTsCtx(DM dm)
Get TS context data structure used by DM.
Definition DMMoFEM.hpp:1279
OpSchurAssembleBase * createOpSchurAssembleEnd(std::vector< std::string > fields_name, std::vector< boost::shared_ptr< Range > > field_ents, SmartPetscObj< AO > ao, SmartPetscObj< Mat > schur, bool sym_schur, bool symm_op)
Construct a new Op Schur Assemble End object.
Definition Schur.cpp:2663
MoFEMErrorCode setSchurA00MatSolvePC(SmartPetscObj< PC > pc)
Set PC for A00 block.
Definition Schur.cpp:2705
boost::shared_ptr< PCMGSetUpViaApproxOrdersCtx > createPCMGSetUpViaApproxOrdersCtx(DM dm, Mat A, bool use_shell_mat)
createPCMGSetUpViaApproxOrdersCtx
auto createDMHybridisedL2Matrix(DM dm)
Get smart hybridised L2 matrix from DM.
Definition DMMoFEM.hpp:1207
auto getDMSubData(DM dm)
Get sub problem data structure.
Definition DMMoFEM.hpp:1295
PetscErrorCode TsSetI2Jacobian(TS ts, PetscReal t, Vec u, Vec u_t, Vec u_tt, PetscReal a, PetscReal aa, Mat A, Mat B, void *ctx)
Calculation Jacobian for second order PDE in time.
Definition TsCtx.cpp:519
MoFEMErrorCode PCMGSetUpViaApproxOrders(PC pc, boost::shared_ptr< PCMGSetUpViaApproxOrdersCtx > ctx, int verb)
Function build MG structure.
boost::shared_ptr< BlockStructure > createBlockMatStructure(DM dm, SchurFEOpsFEandFields schur_fe_op_vec)
Create a Mat Diag Blocks object.
Definition Schur.cpp:1082
boost::shared_ptr< NestSchurData > createSchurNestedMatrixStruture(std::pair< SmartPetscObj< DM >, SmartPetscObj< DM > > dms, boost::shared_ptr< BlockStructure > block_mat_data_ptr, std::vector< std::string > fields_names, std::vector< boost::shared_ptr< Range > > field_ents, bool add_preconditioner_block)
Get the Schur Nest Mat Array object.
Definition Schur.cpp:2421
MoFEMErrorCode DMMoFEMSetNestSchurData(DM dm, boost::shared_ptr< NestSchurData >)
Definition DMMoFEM.cpp:1555
auto createDMNestSchurMat(DM dm)
Definition DMMoFEM.hpp:1221
auto createDM(MPI_Comm comm, const std::string dm_type_name)
Creates smart DM object.
MoFEMErrorCode assembleBlockMatSchur(MoFEM::Interface &m_field, Mat B, Mat S, std::vector< std::string > fields_name, std::vector< boost::shared_ptr< Range > > field_ents, SmartPetscObj< AO > ao)
Assemble Schur matrix.
Definition Schur.cpp:1895
OpSchurAssembleBase * createOpSchurAssembleBegin()
Definition Schur.cpp:2658
auto createDMBlockMat(DM dm)
Definition DMMoFEM.hpp:1214
constexpr double t
plate stiffness
Definition plate.cpp:58
FTensor::Index< 'm', 3 > m
static boost::shared_ptr< SetUpSchur > createSetUpSchur(MoFEM::Interface &m_field, EshelbianCore *ep_core_ptr)
std::vector< boost::shared_ptr< Range > > a00RangeList
const std::string skeletonElement
MoFEM::Interface & mField
const std::string spatialL2Disp
SmartPetscObj< IS > crackHybridIs
boost::shared_ptr< FaceElementForcesAndSourcesCore > elasticBcLhs
const std::string elementVolumeName
const std::string piolaStress
std::vector< std::string > a00FieldList
const std::string bubbleField
boost::shared_ptr< VolumeElementForcesAndSourcesCore > elasticFeLhs
boost::shared_ptr< PhysicalEquations > physicalEquations
const std::string rotAxis
const std::string contactDisp
static PetscBool plasticVolume
const std::string naturalBcElement
boost::shared_ptr< Range > crackFaces
const std::string hybridSpatialDisp
SmartPetscObj< DM > dmElastic
Elastic problem.
MoFEMErrorCode withFieldOrders(Op &&op) const
const std::string contactElement
virtual MPI_Comm & get_comm() const =0
Deprecated interface functions.
intrusive_ptr for managing petsc objects
MoFEMErrorCode getInterface(IFACE *&iface) const
Get interface reference to pointer of interface.
P_MultiGridData(SmartPetscObj< DM > dm, SmartPetscObj< PC > pc, SmartPetscObj< Mat > S)
EshelbianCore * epCorePtr
boost::shared_ptr< std::vector< unsigned char > > piolaZeroDofsMarker
SmartPetscObj< Mat > S
boost::shared_ptr< std::vector< boost::weak_ptr< NumeredDofEntity > > > piolaZeroDofsVec
boost::shared_ptr< P_MultiGridData > pMGPtr
MoFEMErrorCode setUp(TS ts)
MoFEMErrorCode setUp(SmartPetscObj< KSP >)
virtual ~SetUpSchurImpl()
MoFEMErrorCode postProc()
SmartPetscObj< AO > aoS
MoFEMErrorCode preProc()
MoFEM::Interface & mField
SetUpSchurImpl(MoFEM::Interface &m_field, EshelbianCore *ep_core_ptr)
[Push operators to pipeline]
constexpr int SPACE_DIM
[Define dimension]
Definition elastic.cpp:18
constexpr AssemblyType A
[Define dimension]
Definition elastic.cpp:21