6#undef PETSC_VERSION_RELEASE
7#define PETSC_VERSION_RELEASE 1
9#if PETSC_VERSION_GE(3, 6, 0)
10#include <petsc/private/petscimpl.h>
12#include <petsc-private/petscimpl.h>
15#if PETSC_VERSION_GE(3, 6, 0)
16#include <petsc/private/dmimpl.h>
19#include <petsc-private/dmimpl.h>
20#include <petsc-private/vecimpl.h>
34 template <InsertMode MODE>
37 MatSORType flag, PetscReal shift,
38 PetscInt its, PetscInt lits, Vec x);
86 boost::ptr_vector<PCMGSubMatrixCtx>
143template <InsertMode MODE>
147 CHKERR MatShellGetContext(
a, &void_ctx);
151 CHKERR VecScatterBegin(ctx->
sCat, x, ctx->
X, INSERT_VALUES, SCATTER_REVERSE);
152 CHKERR VecScatterEnd(ctx->
sCat, x, ctx->
X, INSERT_VALUES, SCATTER_REVERSE);
154 CHKERR VecScatterBegin(ctx->
sCat, ctx->
F, f, MODE, SCATTER_FORWARD);
155 CHKERR VecScatterEnd(ctx->
sCat, ctx->
F, f, MODE, SCATTER_FORWARD);
169 PetscReal shift, PetscInt its, PetscInt lits,
176 CHKERR MatShellGetContext(mat, &void_ctx);
180 CHKERR VecScatterBegin(ctx->
sCat, b, ctx->
X, INSERT_VALUES, SCATTER_REVERSE);
181 CHKERR VecScatterEnd(ctx->
sCat, b, ctx->
X, INSERT_VALUES, SCATTER_REVERSE);
182 CHKERR MatSOR(ctx->
A, ctx->
X,
omega, flag, shift, its, lits, ctx->
F);
183 CHKERR VecScatterBegin(ctx->
sCat, ctx->
F, x, INSERT_VALUES, SCATTER_FORWARD);
184 CHKERR VecScatterEnd(ctx->
sCat, ctx->
F, x, INSERT_VALUES, SCATTER_FORWARD);
193 CHKERRABORT(PETSC_COMM_WORLD,
ierr);
214#define GET_DM_FIELD(DM) \
216 static_cast<DMCtx *>(DM->data)->getInterface<DMMGViaApproxOrdersCtx>(); \
220 PetscValidHeaderSpecific(dm, DM_CLASSID, 1);
228 bool create_sub_matrix,
230 PetscValidHeaderSpecific(dm, DM_CLASSID, 1);
240 CHKERR AOApplicationToPetscIS(dm_field->aO, is2);
242 if (create_sub_matrix) {
248 CHKERR PetscObjectGetComm((PetscObject)A, &comm);
251 &(dm_field->shellMatrixCtxPtr.back()),
253 CHKERR MatShellSetOperation(sub_a_raw, MATOP_MULT,
255 CHKERR MatShellSetOperation(sub_a_raw, MATOP_MULT_ADD,
257 CHKERR MatShellSetOperation(sub_a_raw, MATOP_SOR,
259 dm_field->kspOperators.emplace_back(
263#if PETSC_VERSION_GE(3, 8, 0)
264 CHKERR MatCreateSubMatrix(A, is2, is2, MAT_INITIAL_MATRIX, &sub_a_raw);
266 CHKERR MatGetSubMatrix(A, is2, is2, MAT_INITIAL_MATRIX, &sub_a_raw);
268 dm_field->kspOperators.emplace_back(
277 PetscInfo(dm,
"Push back IS to DMMGViaApproxOrders\n");
282 PetscValidHeaderSpecific(dm, DM_CLASSID, 1);
285 if (dm_field->coarseningIS.back()) {
286 dm_field->coarseningIS.pop_back();
288 dm_field->kspOperators.pop_back();
289 PetscInfo(dm,
"Pop back IS to DMMGViaApproxOrders\n");
294 PetscValidHeaderSpecific(dm, DM_CLASSID, 1);
297 CHKERR dm_field->destroyCoarseningIS();
298 PetscInfo(dm,
"Clear DMs data structures\n");
314 PetscValidHeaderSpecific(dm, DM_CLASSID, 1);
319 ((
DMCtxImpl *)(dm->data))->incrementReference();
330#if PETSC_VERSION_GE(3, 17, 0)
331 PetscInfo(dm,
"Create DMMGViaApproxOrders reference = %d\n",
334 PetscInfo1(dm,
"Create DMMGViaApproxOrders reference = %d\n",
341 PetscValidHeaderSpecific(dm, DM_CLASSID, 1);
344 CHKERR dm_field->destroyCoarseningIS();
351 PetscValidHeaderSpecific(dm, DM_CLASSID, 1);
355 int leveldown = dm->leveldown;
357 if (dm_field->kspOperators.empty()) {
361 CHKERR PetscObjectGetComm((PetscObject)dm, &comm);
362 if (dm_field->kspOperators.empty()) {
364 "data inconsistency, operator can not be set");
366 if (
static_cast<int>(dm_field->kspOperators.size()) < leveldown) {
368 "data inconsistency, no IS for that level");
370 *M = dm_field->kspOperators[dm_field->kspOperators.size() - 1 - leveldown];
371 CHKERR PetscObjectReference((PetscObject)*M);
375#if PETSC_VERSION_GE(3, 17, 0)
376 PetscInfo(dm,
"Create Matrix DMMGViaApproxOrders leveldown = %d\n",
379 PetscInfo1(dm,
"Create Matrix DMMGViaApproxOrders leveldown = %d\n",
387 PetscValidHeaderSpecific(dm, DM_CLASSID, 1);
390 CHKERR PetscObjectGetComm((PetscObject)dm, &comm);
391 CHKERR DMCreate(comm, dmc);
392 (*dmc)->data = dm->data;
394 CHKERR DMGetType(dm, &type);
395 CHKERR DMSetType(*dmc, type);
397#if PETSC_VERSION_GE(3, 17, 0)
398 PetscInfo(dm,
"Coarsen DMMGViaApproxOrders leveldown = %d\n", dm->leveldown);
400 PetscInfo1(dm,
"Coarsen DMMGViaApproxOrders leveldown = %d\n", dm->leveldown);
407 PetscValidHeaderSpecific(dm1, DM_CLASSID, 1);
408 PetscValidHeaderSpecific(dm2, DM_CLASSID, 1);
412 CHKERR PetscObjectGetComm((PetscObject)dm1, &comm);
419 int dm_down_leveldown = dm_down->leveldown;
420 int dm_up_leveldown = dm_up->leveldown;
421#if PETSC_VERSION_GE(3, 17, 0)
423 "Create interpolation DMMGViaApproxOrders dm1_leveldown = %d "
424 "dm2_leveldown = %d\n",
425 dm_down_leveldown, dm_up_leveldown);
428 "Create interpolation DMMGViaApproxOrders dm1_leveldown = %d "
429 "dm2_leveldown = %d\n",
430 dm_down_leveldown, dm_up_leveldown);
437 if (
static_cast<int>(dm_field->coarseningIS.size()) < dm_down_leveldown) {
440 is_down = dm_field->coarseningIS[dm_field->coarseningIS.size() - 1 -
442 CHKERR ISGetSize(is_down, &M);
443 CHKERR ISGetLocalSize(is_down, &
m);
448 if (
static_cast<int>(dm_field->coarseningIS.size()) < dm_up_leveldown) {
453 ->coarseningIS[dm_field->coarseningIS.size() - 1 - dm_up_leveldown];
455 CHKERR ISGetLocalSize(is_up, &
n);
461 CHKERR MatCreate(comm, mat);
463 CHKERR MatSetType(*mat, MATMPIAIJ);
464 CHKERR MatMPIAIJSetPreallocation(*mat, 1, PETSC_NULLPTR, 0, PETSC_NULLPTR);
467 PetscLayout rmap, cmap;
468 CHKERR MatGetLayouts(*mat, &rmap, &cmap);
469 int rstart, rend, cstart, cend;
470 CHKERR PetscLayoutGetRange(rmap, &rstart, &rend);
471 CHKERR PetscLayoutGetRange(cmap, &cstart, &cend);
473 const int *row_indices_ptr, *col_indices_ptr;
474 CHKERR ISGetIndices(is_down, &row_indices_ptr);
475 CHKERR ISGetIndices(is_up, &col_indices_ptr);
477 map<int, int> idx_map;
478 for (
int ii = 0; ii <
m; ii++) {
479 idx_map[row_indices_ptr[ii]] = rstart + ii;
482 CHKERR MatZeroEntries(*mat);
484 for (
int jj = 0; jj <
n; jj++) {
485 map<int, int>::iterator mit = idx_map.find(col_indices_ptr[jj]);
486 if (mit != idx_map.end()) {
487 CHKERR MatSetValue(*mat, mit->second, cstart + jj, 1, INSERT_VALUES);
491 CHKERR ISRestoreIndices(is_down, &row_indices_ptr);
492 CHKERR ISRestoreIndices(is_up, &col_indices_ptr);
494 CHKERR MatAssemblyBegin(*mat, MAT_FINAL_ASSEMBLY);
495 CHKERR MatAssemblyEnd(*mat, MAT_FINAL_ASSEMBLY);
498 *vec = PETSC_NULLPTR;
505 PetscValidHeaderSpecific(dm, DM_CLASSID, 1);
507 int leveldown = dm->leveldown;
509 if (dm_field->kspOperators.empty()) {
512#if PETSC_VERSION_GE(3, 5, 3)
514 dm_field->kspOperators[dm_field->kspOperators.size() - 1 - leveldown],
518 dm_field->kspOperators[dm_field->kspOperators.size() - 1 - leveldown],
523#if PETSC_VERSION_GE(3, 17, 0)
524 PetscInfo(dm,
"Create global vector DMMGViaApproxOrders leveldown = %d\n",
527 PetscInfo1(dm,
"Create global vector DMMGViaApproxOrders leveldown = %d\n",
535 PetscOptionsBegin(PETSC_COMM_WORLD,
"",
536 "MOFEM Multi-Grid (Orders) pre-conditioner",
"none");
538 CHKERR PetscOptionsInt(
"-mofem_mg_levels",
"nb levels of multi-grid solver",
540 CHKERR PetscOptionsInt(
"-mofem_mg_coarse_order",
541 "approximation order of coarse level",
"", 2,
543 CHKERR PetscOptionsInt(
"-mofem_mg_order_at_last_level",
"order at last level",
545 CHKERR PetscOptionsInt(
"-mofem_mg_verbose",
"nb levels of multi-grid solver",
547 PetscBool shell_sub_a =
shellSubA ? PETSC_TRUE : PETSC_FALSE;
548 CHKERR PetscOptionsBool(
"-mofem_mg_shell_a",
"use shell matrix as sub matrix",
549 "", shell_sub_a, &shell_sub_a, NULL);
571 ->getPetscGlobalDofIdx();
577 string problem_name = problem_ptr->
getName();
579 order_at_next_level, is);
596 CHKERR PetscObjectGetComm((PetscObject)
dM, &comm);
598 MOFEM_LOG_C(
"PCMGViaApproximationOrders", Sev::inform,
"set MG levels %u\n",
604 std::vector<IS> is_vec(
nbLevels + 1);
607 for (
int kk = 0; kk <
nbLevels; kk++) {
611 CHKERR ISGetSize(is_vec[kk], &is_glob_size[kk]);
612 CHKERR ISGetLocalSize(is_vec[kk], &is_loc_size[kk]);
615 "Nb. dofs at level [ %d ] global %u local %d\n", kk,
616 is_glob_size[kk], is_loc_size[kk]);
619 if (is_glob_size[kk] == 0) {
624 for (
int kk = 0; kk !=
nbLevels; kk++) {
625 if (kk ==
nbLevels - 1 && use_mat_a) {
642 for (
unsigned int kk = 0; kk < is_vec.size(); kk++) {
652boost::shared_ptr<PCMGSetUpViaApproxOrdersCtx>
654 return boost::make_shared<PCMGSetUpViaApproxOrdersCtx>(dm, A, use_shell_mat);
658 PC pc, boost::shared_ptr<PCMGSetUpViaApproxOrdersCtx> ctx,
int verb) {
660 PetscValidHeaderSpecific(pc, PC_CLASSID, 1);
663 auto core_log = logging::core::get();
665 "PCMGViaApproximationOrders"));
667 MOFEM_LOG_TAG(
"PCMGViaApproximationOrders",
"PCMGViaApproximationOrders");
669 MOFEM_LOG(
"PCMGViaApproximationOrders", Sev::verbose)
670 <<
"Setup PCMGSetUpViaApproxOrders";
673 CHKERR ctx->buildProlongationOperator(
true, verb);
675#if PETSC_VERSION_GE(3, 8, 0)
676 CHKERR PCMGSetGalerkin(pc, PC_MG_GALERKIN_NONE);
678 CHKERR PCMGSetGalerkin(pc, PETSC_FALSE);
681 CHKERR PCMGSetLevels(pc, ctx->nbLevels, NULL);
683 MOFEM_LOG(
"PCMGViaApproximationOrders", Sev::noisy)
684 <<
"Setup PCMGSetUpViaApproxOrders <- end";
Implementation of DM context. You should not use it directly.
Discrete manager interface for MoFEM.
#define MOFEM_LOG_SEVERITY_SYNC(comm, severity)
Synchronise "SYNC" on curtain severity level.
#define MOFEM_LOG_C(channel, severity, format,...)
header of multi-grid solver for p- adaptivity
#define MoFEMFunctionReturnHot(a)
Last executable line of each PETSc function used for error handling. Replaces return()
#define MoFEMFunctionBegin
First executable line of each MoFEM function, used for error handling. Final line of MoFEM functions ...
@ MOFEM_DATA_INCONSISTENCY
#define MoFEMFunctionReturn(a)
Last executable line of each PETSc function used for error handling. Replaces return()
#define CHKERR
Inline error check.
#define MoFEMFunctionBeginHot
First executable line of each MoFEM function, used for error handling. Final line of MoFEM functions ...
constexpr double omega
Save field DOFS on vertices/tags.
MoFEMErrorCode DMMGViaApproxOrdersPopBackCoarseningIS(DM dm)
Pop IS form MG via approximation orders.
PetscErrorCode DMDestroy_MoFEM(DM dm)
Destroys dm with MoFEM data structure.
MoFEMErrorCode DMMGViaApproxOrdersPushBackCoarseningIS(DM dm, IS is, Mat A, bool create_sub_matrix, bool shell_sub_a)
Push back coarsening level to MG via approximation orders.
PetscErrorCode DMMoFEMGetProblemPtr(DM dm, const MoFEM::Problem **problem_ptr)
Get pointer to problem data structure.
MoFEMErrorCode DMCoarsen_MGViaApproxOrders(DM dm, MPI_Comm comm, DM *dmc)
Coarsen DM.
PetscErrorCode DMCreateMatrix_MoFEM(DM dm, Mat *M)
MoFEMErrorCode DMRegister_MGViaApproxOrders(const char sname[])
Register DM for Multi-Grid via approximation orders.
PetscErrorCode DMoFEMGetInterfacePtr(DM dm, MoFEM::Interface **m_field_ptr)
Get pointer to MoFEM::Interface.
PetscErrorCode DMCreateGlobalVector_MoFEM(DM dm, Vec *g)
DMShellSetCreateGlobalVector.
MoFEMErrorCode DMMGViaApproxOrdersClearCoarseningIS(DM dm)
Clear approximation orders.
MoFEMErrorCode DMCreateMatrix_MGViaApproxOrders(DM dm, Mat *M)
Create matrix for Multi-Grid via approximation orders.
PetscErrorCode DMSetOperators_MoFEM(DM dm)
Set operators for MoFEM dm.
MoFEMErrorCode isCreateProblemOrder(const std::string problem_name, RowColData rc, int min_order, int max_order, IS *is) const
create IS for given order range (collective)
static LoggerType & setLog(const std::string channel)
Set ans resset chanel logger.
#define MOFEM_LOG(channel, severity)
Log.
#define MOFEM_LOG_TAG(channel, tag)
Tag channel.
#define MOFEM_LOG_CHANNEL(channel)
Set and reset channel.
const double n
refractive index of diffusive medium
static MoFEMErrorCodeGeneric< PetscErrorCode > ierr
PetscErrorCode MoFEMErrorCode
MoFEM/PETSc error code.
implementation of Data Operators for Forces and Sources
MoFEMErrorCode sub_mat_sor(Mat mat, Vec b, PetscReal omega, MatSORType flag, PetscReal shift, PetscInt its, PetscInt lits, Vec x)
MoFEMErrorCode DMCreateInterpolation_MGViaApproxOrders(DM dm1, DM dm2, Mat *mat, Vec *vec)
Create interpolation matrix between data managers dm1 and dm2.
static MoFEMErrorCode ksp_set_operators(KSP ksp, Mat A, Mat B, void *ctx)
MoFEMErrorCode sub_mat_mult_generic(Mat a, Vec x, Vec f)
MoFEMErrorCode DMCreateGlobalVector_MGViaApproxOrders(DM dm, Vec *g)
Create global vector for DMGViaApproxOrders.
MoFEMErrorCode DMMGViaApproxOrdersSetAO(DM dm, AO ao)
Set DM ordering.
auto matCreateVecs(Mat mat)
boost::shared_ptr< PCMGSetUpViaApproxOrdersCtx > createPCMGSetUpViaApproxOrdersCtx(DM dm, Mat A, bool use_shell_mat)
createPCMGSetUpViaApproxOrdersCtx
auto createVecScatter(Vec x, IS ix, Vec y, IS iy)
Create a Vec Scatter object.
MoFEMErrorCode DMCreate_MGViaApproxOrders(DM dm)
Create DM data structure for Multi-Grid via approximation orders.
PetscErrorCode DMDestroy_MGViaApproxOrders(DM dm)
Destroy DM.
MoFEMErrorCode PCMGSetUpViaApproxOrders(PC pc, boost::shared_ptr< PCMGSetUpViaApproxOrdersCtx > ctx, int verb)
Function build MG structure.
MoFEMErrorCode sub_mat_mult_add(Mat a, Vec x, Vec f)
MoFEMErrorCode sub_mat_mult(Mat a, Vec x, Vec f)
FTensor::Index< 'm', 3 > m
Structure for DM for multi-grid via approximation orders.
std::vector< SmartPetscObj< Mat > > kspOperators
Get KSP operators.
MoFEMErrorCode query_interface(boost::typeindex::type_index type_index, MoFEM::UnknownInterface **iface) const
SmartPetscObj< DM > coarsenDM
std::vector< SmartPetscObj< IS > > coarseningIS
Coarsening IS.
virtual ~DMMGViaApproxOrdersCtx()
MoFEMErrorCode destroyCoarseningIS()
boost::ptr_vector< PCMGSubMatrixCtx > shellMatrixCtxPtr
Shell sub-matrix context.
Deprecated interface functions.
Section manager is used to create indexes and sections.
static boost::shared_ptr< SinkType > createSink(boost::shared_ptr< std::ostream > stream_ptr, std::string comm_filter)
Create a sink object.
static boost::shared_ptr< std::ostream > getStrmWorld()
Get the strm world object.
int orderAtLastLevel
set maximal evaluated order
DM dM
Distributed mesh manager.
virtual ~PCMGSetUpViaApproxOrdersCtx()=default
virtual MoFEMErrorCode destroyIsAtLevel(int kk, IS *is)
Destroy IS if internally created.
int coarseOrder
approximation order of coarse level
virtual MoFEMErrorCode createIsAtLevel(int kk, IS *is)
Set IS for levels.
virtual MoFEMErrorCode getOptions()
get options from line command
PCMGSetUpViaApproxOrdersCtx(DM dm, Mat a, bool shell_sub_a)
virtual MoFEMErrorCode buildProlongationOperator(bool use_mat_a, int verb=0)
Set up data structures for MG.
Mat A
Matrix at fine level.
int nbLevels
number of multi-grid levels
friend MoFEMErrorCode sub_mat_mult_generic(Mat a, Vec x, Vec f)
virtual ~PCMGSubMatrixCtx()=default
friend MoFEMErrorCode sub_mat_sor(Mat mat, Vec b, PetscReal omega, MatSORType flag, PetscReal shift, PetscInt its, PetscInt lits, Vec x)
PCMGSubMatrixCtx(Mat a, IS is)
PetscLogEvent MOFEM_EVENT_sor
MoFEMErrorCode initData(Vec x)
PetscLogEvent MOFEM_EVENT_mult
SmartPetscObj< VecScatter > sCat
keeps basic data about problem
DofIdx getNbLocalDofsRow() const
auto & getNumeredRowDofsPtr() const
get access to numeredRowDofsPtr storing DOFs on rows
intrusive_ptr for managing petsc objects
base class for all interface classes
MoFEMErrorCode getInterface(IFACE *&iface) const
Get interface reference to pointer of interface.