v0.14.0
PipelineManager.cpp
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1 /** \file PipelineManager.cpp
2  * \brief Implementation of basic interface
3  * \ingroup mofem_basic_interface
4  */
5 
6 
7 namespace MoFEM {
8 
9 MoFEMErrorCode
10 PipelineManager::query_interface(boost::typeindex::type_index type_index,
11  UnknownInterface **iface) const {
12  *iface = const_cast<PipelineManager *>(this);
13  return 0;
14 }
15 
16 PipelineManager::PipelineManager(const MoFEM::Core &core)
17  : cOre(const_cast<Core &>(core)) {}
18 
19 MoFEMErrorCode PipelineManager::loopFiniteElements(SmartPetscObj<DM> dm) {
20  MoFEMFunctionBegin;
21  Interface &m_field = cOre;
22  Simple *simple = m_field.getInterface<Simple>();
23  if (!dm)
24  dm = simple->getDM();
25 
26  // Add element to calculate lhs of stiff part
27  if (feDomainLhs)
28  CHKERR DMoFEMLoopFiniteElements(dm, simple->getDomainFEName(), feDomainLhs);
29  if (feBoundaryLhs)
30  CHKERR DMoFEMLoopFiniteElements(dm, simple->getBoundaryFEName(),
31  feBoundaryLhs);
32  if (feSkeletonLhs)
33  CHKERR DMoFEMLoopFiniteElements(dm, simple->getSkeletonFEName(),
34  feSkeletonLhs);
35 
36  // Add element to calculate rhs of stiff part
37  if (feDomainRhs)
38  CHKERR DMoFEMLoopFiniteElements(dm, simple->getDomainFEName(), feDomainRhs);
39  if (feBoundaryRhs)
40  CHKERR DMoFEMLoopFiniteElements(dm, simple->getBoundaryFEName(),
41  feBoundaryRhs);
42  if (feSkeletonRhs)
43  CHKERR DMoFEMLoopFiniteElements(dm, simple->getSkeletonFEName(),
44  feSkeletonRhs);
45 
46  MoFEMFunctionReturn(0);
47 }
48 
49 SmartPetscObj<KSP> PipelineManager::createKSP(SmartPetscObj<DM> dm) {
50  Interface &m_field = cOre;
51  Simple *simple = m_field.getInterface<Simple>();
52 
53  auto copy_dm_struture = [&](auto simple_dm) {
54  MPI_Comm comm;
55  CHKERR PetscObjectGetComm(getPetscObject(simple_dm.get()), &comm);
56  DMType type;
57  CHKERR DMGetType(simple_dm, &type);
58  dm = createDM(comm, type);
59  CHKERR DMMoFEMDuplicateDMCtx(simple_dm, dm);
60  return dm;
61  };
62 
63  if (!dm)
64  dm = copy_dm_struture(simple->getDM());
65 
66  const MoFEM::Problem *prb_ptr;
67  CHKERR DMMoFEMGetProblemPtr(dm, &prb_ptr);
68 
69  auto set_dm_section = [&](auto dm) {
70  MoFEMFunctionBegin;
71  auto section =
72  m_field.getInterface<ISManager>()->sectionCreate(prb_ptr->getName());
73  CHKERR DMSetSection(dm, section);
74  MoFEMFunctionReturn(0);
75  };
76  CHKERR set_dm_section(dm);
77 
78  boost::shared_ptr<FEMethod> null;
79 
80  getDMKspCtx(dm)->clearLoops();
81 
82  // Add element to calculate lhs of stiff part
83  if (feDomainLhs)
84  CHKERR DMMoFEMKSPSetComputeOperators(dm, simple->getDomainFEName(),
85  feDomainLhs, null, null);
86  if (feBoundaryLhs)
87  CHKERR DMMoFEMKSPSetComputeOperators(dm, simple->getBoundaryFEName(),
88  feBoundaryLhs, null, null);
89  if (feSkeletonLhs)
90  CHKERR DMMoFEMKSPSetComputeOperators(dm, simple->getSkeletonFEName(),
91  feSkeletonLhs, null, null);
92 
93  // Add element to calculate rhs of stiff part
94  if (feDomainRhs)
95  CHKERR DMMoFEMKSPSetComputeRHS(dm, simple->getDomainFEName(), feDomainRhs,
96  null, null);
97  if (feBoundaryRhs)
98  CHKERR DMMoFEMKSPSetComputeRHS(dm, simple->getBoundaryFEName(),
99  feBoundaryRhs, null, null);
100  if (feSkeletonRhs)
101  CHKERR DMMoFEMKSPSetComputeRHS(dm, simple->getSkeletonFEName(),
102  feSkeletonRhs, null, null);
103 
104  auto ksp = MoFEM::createKSP(m_field.get_comm());
105  CHKERR KSPSetDM(ksp, dm);
106  return ksp;
107 }
108 
109 SmartPetscObj<SNES> PipelineManager::createSNES(SmartPetscObj<DM> dm) {
110  Interface &m_field = cOre;
111  Simple *simple = m_field.getInterface<Simple>();
112 
113  auto copy_dm_struture = [&](auto simple_dm) {
114  MPI_Comm comm;
115  CHKERR PetscObjectGetComm(getPetscObject(simple_dm.get()), &comm);
116  DMType type;
117  CHKERR DMGetType(simple_dm, &type);
118  dm = createDM(comm, type);
119  CHKERR DMMoFEMDuplicateDMCtx(simple_dm, dm);
120  return dm;
121  };
122 
123  if (!dm)
124  dm = copy_dm_struture(simple->getDM());
125 
126  const MoFEM::Problem *prb_ptr;
127  CHKERR DMMoFEMGetProblemPtr(dm, &prb_ptr);
128 
129  auto set_dm_section = [&](auto dm) {
130  MoFEMFunctionBegin;
131  auto section =
132  m_field.getInterface<ISManager>()->sectionCreate(prb_ptr->getName());
133  CHKERR DMSetSection(dm, section);
134  MoFEMFunctionReturn(0);
135  };
136  CHKERR set_dm_section(dm);
137 
138  getDMSnesCtx(dm)->clearLoops();
139 
140  boost::shared_ptr<FEMethod> null;
141 
142  // Add element to calculate lhs of stiff part
143  if (feDomainLhs)
144  CHKERR DMMoFEMSNESSetJacobian(dm, simple->getDomainFEName(), feDomainLhs,
145  null, null);
146  if (feBoundaryLhs)
147  CHKERR DMMoFEMSNESSetJacobian(dm, simple->getBoundaryFEName(),
148  feBoundaryLhs, null, null);
149  if (feSkeletonLhs)
150  CHKERR DMMoFEMSNESSetJacobian(dm, simple->getSkeletonFEName(),
151  feSkeletonLhs, null, null);
152 
153  // Add element to calculate rhs of stiff part
154  if (feDomainRhs)
155  CHKERR DMMoFEMSNESSetFunction(dm, simple->getDomainFEName(), feDomainRhs,
156  null, null);
157  if (feBoundaryRhs)
158  CHKERR DMMoFEMSNESSetFunction(dm, simple->getBoundaryFEName(),
159  feBoundaryRhs, null, null);
160  if (feSkeletonRhs)
161  CHKERR DMMoFEMSNESSetFunction(dm, simple->getSkeletonFEName(),
162  feSkeletonRhs, null, null);
163 
164  auto snes = MoFEM::createSNES(m_field.get_comm());
165  CHKERR SNESSetDM(snes, dm);
166  return snes;
167 }
168 
169 SmartPetscObj<TS> PipelineManager::createTS(const TSType type,
170  SmartPetscObj<DM> dm) {
171  switch (type) {
172  case EX:
173  return createTSEX(dm);
174  break;
175  case IM:
176  return createTSIM(dm);
177  break;
178  case IM2:
179  return createTSIM2(dm);
180  break;
181  case IMEX:
182  return createTSIMEX(dm);
183  break;
184  default:
185  CHK_THROW_MESSAGE(MOFEM_NOT_IMPLEMENTED,
186  "TS solver handling not implemented");
187  break;
188  }
189  return SmartPetscObj<TS>();
190 }
191 
192 SmartPetscObj<TS> PipelineManager::createTSEX(SmartPetscObj<DM> dm) {
193  Interface &m_field = cOre;
194  Simple *simple = m_field.getInterface<Simple>();
195 
196  auto copy_dm_struture = [&](auto simple_dm) {
197  MPI_Comm comm;
198  CHKERR PetscObjectGetComm(getPetscObject(simple_dm.get()), &comm);
199  DMType type;
200  CHKERR DMGetType(simple_dm, &type);
201  dm = createDM(comm, type);
202  CHKERR DMMoFEMDuplicateDMCtx(simple_dm, dm);
203  return dm;
204  };
205 
206  if (!dm)
207  dm = copy_dm_struture(simple->getDM());
208 
209  const MoFEM::Problem *prb_ptr;
210  CHKERR DMMoFEMGetProblemPtr(dm, &prb_ptr);
211 
212  auto set_dm_section = [&](auto dm) {
213  MoFEMFunctionBegin;
214  auto section =
215  m_field.getInterface<ISManager>()->sectionCreate(prb_ptr->getName());
216  CHKERR DMSetSection(dm, section);
217  MoFEMFunctionReturn(0);
218  };
219  CHKERR set_dm_section(dm);
220 
221  boost::shared_ptr<FEMethod> null;
222 
223  getDMTsCtx(dm)->clearLoops();
224 
225  // Add element to calculate rhs of slow part
226  if (feDomainExplicitRhs)
227  CHKERR DMMoFEMTSSetRHSFunction(dm, simple->getDomainFEName(),
228  feDomainExplicitRhs, null, null);
229  if (feBoundaryExplicitRhs)
230  CHKERR DMMoFEMTSSetRHSFunction(dm, simple->getBoundaryFEName(),
231  feBoundaryExplicitRhs, null, null);
232  if (feSkeletonExplicitRhs)
233  CHKERR DMMoFEMTSSetRHSFunction(dm, simple->getSkeletonFEName(),
234  feSkeletonExplicitRhs, null, null);
235 
236  // Note: More cases for explict, and implicit time interation cases can be
237  // implemented here.
238 
239  auto ts = MoFEM::createTS(m_field.get_comm());
240  CHKERR TSSetDM(ts, dm);
241  return ts;
242 }
243 
244 SmartPetscObj<TS> PipelineManager::createTSIM(SmartPetscObj<DM> dm) {
245  Interface &m_field = cOre;
246  Simple *simple = m_field.getInterface<Simple>();
247 
248  auto copy_dm_struture = [&](auto simple_dm) {
249  MPI_Comm comm;
250  CHKERR PetscObjectGetComm(getPetscObject(simple_dm.get()), &comm);
251  DMType type;
252  CHKERR DMGetType(simple_dm, &type);
253  dm = createDM(comm, type);
254  CHKERR DMMoFEMDuplicateDMCtx(simple_dm, dm);
255  return dm;
256  };
257 
258  if (!dm)
259  dm = copy_dm_struture(simple->getDM());
260 
261  const MoFEM::Problem *prb_ptr;
262  CHKERR DMMoFEMGetProblemPtr(dm, &prb_ptr);
263 
264  auto set_dm_section = [&](auto dm) {
265  MoFEMFunctionBegin;
266  auto section =
267  m_field.getInterface<ISManager>()->sectionCreate(prb_ptr->getName());
268  CHKERR DMSetSection(dm, section);
269  MoFEMFunctionReturn(0);
270  };
271  CHKERR set_dm_section(dm);
272 
273  boost::shared_ptr<FEMethod> null;
274 
275  // Add element to calculate lhs of stiff part
276  if (feDomainLhs)
277  CHKERR DMMoFEMTSSetIJacobian(dm, simple->getDomainFEName(), feDomainLhs,
278  null, null);
279  if (feBoundaryLhs)
280  CHKERR DMMoFEMTSSetIJacobian(dm, simple->getBoundaryFEName(), feBoundaryLhs,
281  null, null);
282  if (feSkeletonLhs)
283  CHKERR DMMoFEMTSSetIJacobian(dm, simple->getSkeletonFEName(), feSkeletonLhs,
284  null, null);
285 
286  // Add element to calculate rhs of stiff part
287  if (feDomainRhs)
288  CHKERR DMMoFEMTSSetIFunction(dm, simple->getDomainFEName(), feDomainRhs,
289  null, null);
290  if (feBoundaryRhs)
291  CHKERR DMMoFEMTSSetIFunction(dm, simple->getBoundaryFEName(), feBoundaryRhs,
292  null, null);
293  if (feSkeletonRhs)
294  CHKERR DMMoFEMTSSetIFunction(dm, simple->getSkeletonFEName(), feSkeletonRhs,
295  null, null);
296 
297  // Note: More cases for explict, and implicit time interation cases can be
298  // implemented here.
299 
300  auto ts = MoFEM::createTS(m_field.get_comm());
301  CHKERR TSSetDM(ts, dm);
302  return ts;
303 }
304 
305 SmartPetscObj<TS> PipelineManager::createTSIM2(SmartPetscObj<DM> dm) {
306  Interface &m_field = cOre;
307  Simple *simple = m_field.getInterface<Simple>();
308 
309  auto copy_dm_struture = [&](auto simple_dm) {
310  MPI_Comm comm;
311  CHKERR PetscObjectGetComm(getPetscObject(simple_dm.get()), &comm);
312  DMType type;
313  CHKERR DMGetType(simple_dm, &type);
314  dm = createDM(comm, type);
315  CHKERR DMMoFEMDuplicateDMCtx(simple_dm, dm);
316  return dm;
317  };
318 
319  if (!dm)
320  dm = copy_dm_struture(simple->getDM());
321 
322  const MoFEM::Problem *prb_ptr;
323  CHKERR DMMoFEMGetProblemPtr(dm, &prb_ptr);
324 
325  auto set_dm_section = [&](auto dm) {
326  MoFEMFunctionBegin;
327  auto section =
328  m_field.getInterface<ISManager>()->sectionCreate(prb_ptr->getName());
329  CHKERR DMSetSection(dm, section);
330  MoFEMFunctionReturn(0);
331  };
332  CHKERR set_dm_section(dm);
333 
334  boost::shared_ptr<FEMethod> null;
335 
336  // Add element to calculate lhs of stiff part
337  if (feDomainLhs)
338  CHKERR DMMoFEMTSSetI2Jacobian(dm, simple->getDomainFEName(), feDomainLhs,
339  null, null);
340  if (feBoundaryLhs)
341  CHKERR DMMoFEMTSSetI2Jacobian(dm, simple->getBoundaryFEName(),
342  feBoundaryLhs, null, null);
343  if (feSkeletonLhs)
344  CHKERR DMMoFEMTSSetI2Jacobian(dm, simple->getSkeletonFEName(),
345  feSkeletonLhs, null, null);
346 
347  // Add element to calculate rhs of stiff part
348  if (feDomainRhs)
349  CHKERR DMMoFEMTSSetI2Function(dm, simple->getDomainFEName(), feDomainRhs,
350  null, null);
351  if (feBoundaryRhs)
352  CHKERR DMMoFEMTSSetI2Function(dm, simple->getBoundaryFEName(),
353  feBoundaryRhs, null, null);
354  if (feSkeletonRhs)
355  CHKERR DMMoFEMTSSetI2Function(dm, simple->getSkeletonFEName(),
356  feSkeletonRhs, null, null);
357 
358  // Note: More cases for explict, and implicit time interation cases can be
359  // implemented here.
360 
361  auto ts = MoFEM::createTS(m_field.get_comm());
362  CHKERR TSSetDM(ts, dm);
363  return ts;
364 }
365 
366 SmartPetscObj<TS> PipelineManager::createTSIMEX(SmartPetscObj<DM> dm) {
367  Interface &m_field = cOre;
368  Simple *simple = m_field.getInterface<Simple>();
369 
370  auto copy_dm_struture = [&](auto simple_dm) {
371  MPI_Comm comm;
372  CHKERR PetscObjectGetComm(getPetscObject(simple_dm.get()), &comm);
373  DMType type;
374  CHKERR DMGetType(simple_dm, &type);
375  dm = createDM(comm, type);
376  CHKERR DMMoFEMDuplicateDMCtx(simple_dm, dm);
377  return dm;
378  };
379 
380  if (!dm)
381  dm = copy_dm_struture(simple->getDM());
382 
383  const MoFEM::Problem *prb_ptr;
384  CHKERR DMMoFEMGetProblemPtr(dm, &prb_ptr);
385 
386  auto set_dm_section = [&](auto dm) {
387  MoFEMFunctionBegin;
388  auto section =
389  m_field.getInterface<ISManager>()->sectionCreate(prb_ptr->getName());
390  CHKERR DMSetSection(dm, section);
391  MoFEMFunctionReturn(0);
392  };
393  CHKERR set_dm_section(dm);
394 
395  boost::shared_ptr<FEMethod> null;
396 
397  // Add element to calculate lhs of stiff part
398  if (feDomainLhs)
399  CHKERR DMMoFEMTSSetIJacobian(dm, simple->getDomainFEName(), feDomainLhs,
400  null, null);
401  if (feBoundaryLhs)
402  CHKERR DMMoFEMTSSetIJacobian(dm, simple->getBoundaryFEName(), feBoundaryLhs,
403  null, null);
404  if (feSkeletonLhs)
405  CHKERR DMMoFEMTSSetIJacobian(dm, simple->getSkeletonFEName(), feSkeletonLhs,
406  null, null);
407 
408  // Add element to calculate rhs of stiff part
409  if (feDomainRhs)
410  CHKERR DMMoFEMTSSetIFunction(dm, simple->getDomainFEName(), feDomainRhs,
411  null, null);
412  if (feBoundaryRhs)
413  CHKERR DMMoFEMTSSetIFunction(dm, simple->getBoundaryFEName(), feBoundaryRhs,
414  null, null);
415  if (feSkeletonRhs)
416  CHKERR DMMoFEMTSSetIFunction(dm, simple->getSkeletonFEName(), feSkeletonRhs,
417  null, null);
418 
419  // Add element to calculate rhs of stiff part
420  if (feDomainExplicitRhs)
421  CHKERR DMMoFEMTSSetRHSFunction(dm, simple->getDomainFEName(),
422  feDomainExplicitRhs, null, null);
423  if (feBoundaryExplicitRhs)
424  CHKERR DMMoFEMTSSetRHSFunction(dm, simple->getBoundaryFEName(),
425  feBoundaryExplicitRhs, null, null);
426  if (feSkeletonExplicitRhs)
427  CHKERR DMMoFEMTSSetRHSFunction(dm, simple->getSkeletonFEName(),
428  feSkeletonExplicitRhs, null, null);
429 
430  // Note: More cases for explict, and implicit time interation cases can be
431  // implemented here.
432 
433  auto ts = MoFEM::createTS(m_field.get_comm());
434  CHKERR TSSetDM(ts, dm);
435  return ts;
436 }
437 
438 } // namespace MoFEM
MoFEM::UnknownInterface::getInterface
MoFEMErrorCode getInterface(IFACE *&iface) const
Get interface reference to pointer of interface.
Definition: UnknownInterface.hpp:93
MoFEM::PipelineManager::EX
@ EX
Definition: PipelineManager.hpp:227
MoFEM::CoreTmp< 0 >
Core (interface) class.
Definition: Core.hpp:82
MoFEM::DMMoFEMKSPSetComputeRHS
PetscErrorCode DMMoFEMKSPSetComputeRHS(DM dm, const char fe_name[], MoFEM::FEMethod *method, MoFEM::BasicMethod *pre_only, MoFEM::BasicMethod *post_only)
set KSP right hand side evaluation function
Definition: DMMoFEM.cpp:637
MoFEM::PipelineManager::createSNES
SmartPetscObj< SNES > createSNES(SmartPetscObj< DM > dm=nullptr)
Create SNES (nonlinear) solver.
Definition: PipelineManager.cpp:109
MoFEM::createTS
auto createTS(MPI_Comm comm)
Definition: PetscSmartObj.hpp:249
MoFEM::CoreInterface::get_comm
virtual MPI_Comm & get_comm() const =0
CHK_THROW_MESSAGE
#define CHK_THROW_MESSAGE(err, msg)
Check and throw MoFEM exception.
Definition: definitions.h:609
MoFEM::createSNES
auto createSNES(MPI_Comm comm)
Definition: PetscSmartObj.hpp:255
MoFEM::getDMKspCtx
auto getDMKspCtx(DM dm)
Get KSP context data structure used by DM.
Definition: DMMoFEM.hpp:1113
MoFEM::PipelineManager::loopFiniteElements
MoFEMErrorCode loopFiniteElements(SmartPetscObj< DM > dm=nullptr)
Iterate finite elements.
Definition: PipelineManager.cpp:19
MoFEM::Exceptions::MoFEMErrorCode
PetscErrorCode MoFEMErrorCode
MoFEM/PETSc error code.
Definition: Exceptions.hpp:56
MoFEM::getPetscObject
PetscObject getPetscObject(T obj)
Definition: PetscSmartObj.hpp:9
MoFEM::PipelineManager::feBoundaryRhs
boost::shared_ptr< FEMethod > feBoundaryRhs
Element to assemble RHS side by integrating boundary.
Definition: PipelineManager.hpp:296
MoFEM::PipelineManager::feDomainLhs
boost::shared_ptr< FEMethod > feDomainLhs
Element to assemble LHS side by integrating domain.
Definition: PipelineManager.hpp:294
MoFEM::PipelineManager
PipelineManager interface.
Definition: PipelineManager.hpp:24
MoFEM::createKSP
auto createKSP(MPI_Comm comm)
Definition: PetscSmartObj.hpp:261
MoFEM::DMMoFEMKSPSetComputeOperators
PetscErrorCode DMMoFEMKSPSetComputeOperators(DM dm, const char fe_name[], MoFEM::FEMethod *method, MoFEM::BasicMethod *pre_only, MoFEM::BasicMethod *post_only)
Set KSP operators and push mofem finite element methods.
Definition: DMMoFEM.cpp:678
MoFEM::PipelineManager::createTSIM
SmartPetscObj< TS > createTSIM(SmartPetscObj< DM > dm=nullptr)
Create TS (time) implicit solver.
Definition: PipelineManager.cpp:244
MoFEM::Simple
Simple interface for fast problem set-up.
Definition: Simple.hpp:27
MoFEM::DeprecatedCoreInterface
Deprecated interface functions.
Definition: DeprecatedCoreInterface.hpp:16
MoFEM::PipelineManager::TSType
TSType
Definition: PipelineManager.hpp:227
MoFEM::PipelineManager::feBoundaryLhs
boost::shared_ptr< FEMethod > feBoundaryLhs
Element to assemble LHS side by integrating boundary.
Definition: PipelineManager.hpp:298
CHKERR
#define CHKERR
Inline error check.
Definition: definitions.h:548
MoFEM::DMMoFEMTSSetIJacobian
PetscErrorCode DMMoFEMTSSetIJacobian(DM dm, const std::string fe_name, boost::shared_ptr< MoFEM::FEMethod > method, boost::shared_ptr< MoFEM::BasicMethod > pre_only, boost::shared_ptr< MoFEM::BasicMethod > post_only)
set TS Jacobian evaluation function
Definition: DMMoFEM.cpp:853
MoFEM
implementation of Data Operators for Forces and Sources
Definition: Common.hpp:10
MoFEM::ISManager
Section manager is used to create indexes and sections.
Definition: ISManager.hpp:23
MoFEM::createDM
auto createDM(MPI_Comm comm, const std::string dm_type_name)
Creates smart DM object.
Definition: PetscSmartObj.hpp:141
MoFEM::DMMoFEMTSSetI2Jacobian
PetscErrorCode DMMoFEMTSSetI2Jacobian(DM dm, const std::string fe_name, boost::shared_ptr< MoFEM::FEMethod > method, boost::shared_ptr< MoFEM::BasicMethod > pre_only, boost::shared_ptr< MoFEM::BasicMethod > post_only)
set TS Jacobian evaluation function
Definition: DMMoFEM.cpp:1017
MoFEM::PipelineManager::feDomainRhs
boost::shared_ptr< FEMethod > feDomainRhs
Element to assemble RHS side by integrating domain.
Definition: PipelineManager.hpp:292
MoFEM::PipelineManager::cOre
MoFEM::Core & cOre
Definition: PipelineManager.hpp:289
MoFEM::DMMoFEMTSSetI2Function
PetscErrorCode DMMoFEMTSSetI2Function(DM dm, const std::string fe_name, boost::shared_ptr< MoFEM::FEMethod > method, boost::shared_ptr< MoFEM::BasicMethod > pre_only, boost::shared_ptr< MoFEM::BasicMethod > post_only)
set TS implicit function evaluation function
Definition: DMMoFEM.cpp:975
MoFEM::PipelineManager::IM
@ IM
Definition: PipelineManager.hpp:227
simple
void simple(double P1[], double P2[], double P3[], double c[], const int N)
Definition: acoustic.cpp:69
convert.type
type
Definition: convert.py:64
MoFEM::PipelineManager::createKSP
SmartPetscObj< KSP > createKSP(SmartPetscObj< DM > dm=nullptr)
Create KSP (linear) solver.
Definition: PipelineManager.cpp:49
MoFEM::PipelineManager::feBoundaryExplicitRhs
boost::shared_ptr< FEMethod > feBoundaryExplicitRhs
Definition: PipelineManager.hpp:307
MoFEM::PipelineManager::PipelineManager
PipelineManager(const MoFEM::Core &core)
Definition: PipelineManager.cpp:16
MoFEM::DMMoFEMSNESSetJacobian
PetscErrorCode DMMoFEMSNESSetJacobian(DM dm, const char fe_name[], MoFEM::FEMethod *method, MoFEM::BasicMethod *pre_only, MoFEM::BasicMethod *post_only)
set SNES Jacobian evaluation function
Definition: DMMoFEM.cpp:759
MoFEM::PipelineManager::feSkeletonLhs
boost::shared_ptr< FEMethod > feSkeletonLhs
Element to assemble LHS side by integrating skeleton.
Definition: PipelineManager.hpp:302
MoFEM::PipelineManager::query_interface
MoFEMErrorCode query_interface(boost::typeindex::type_index type_index, UnknownInterface **iface) const
Definition: PipelineManager.cpp:10
MoFEM::UnknownInterface
base class for all interface classes
Definition: UnknownInterface.hpp:34
MoFEM::PipelineManager::createTSEX
SmartPetscObj< TS > createTSEX(SmartPetscObj< DM > dm=nullptr)
Create TS (time) explit solver.
Definition: PipelineManager.cpp:192
MoFEM::DMMoFEMTSSetRHSFunction
PetscErrorCode DMMoFEMTSSetRHSFunction(DM dm, const std::string fe_name, boost::shared_ptr< MoFEM::FEMethod > method, boost::shared_ptr< MoFEM::BasicMethod > pre_only, boost::shared_ptr< MoFEM::BasicMethod > post_only)
set TS the right hand side function
Definition: DMMoFEM.cpp:882
MoFEM::DMMoFEMTSSetIFunction
PetscErrorCode DMMoFEMTSSetIFunction(DM dm, const char fe_name[], MoFEM::FEMethod *method, MoFEM::BasicMethod *pre_only, MoFEM::BasicMethod *post_only)
set TS implicit function evaluation function
Definition: DMMoFEM.cpp:800
MoFEM::PipelineManager::createTSIMEX
SmartPetscObj< TS > createTSIMEX(SmartPetscObj< DM > dm=nullptr)
Create TS (time) implicit-explicit solver.
Definition: PipelineManager.cpp:366
MoFEM::DMMoFEMGetProblemPtr
PetscErrorCode DMMoFEMGetProblemPtr(DM dm, const MoFEM::Problem **problem_ptr)
Get pointer to problem data structure.
Definition: DMMoFEM.cpp:426
MoFEM::PipelineManager::feDomainExplicitRhs
boost::shared_ptr< FEMethod > feDomainExplicitRhs
Element to assemble explict Rhs for IMEX solver.
Definition: PipelineManager.hpp:305
MoFEM::PipelineManager::IM2
@ IM2
Definition: PipelineManager.hpp:227
MoFEM::getDMSnesCtx
auto getDMSnesCtx(DM dm)
Get SNES context data structure used by DM.
Definition: DMMoFEM.hpp:1127
MoFEM::Problem
keeps basic data about problem
Definition: ProblemsMultiIndices.hpp:54
MoFEM::PipelineManager::createTS
SmartPetscObj< TS > createTS(const TSType type, SmartPetscObj< DM > dm=nullptr)
create TS (time) solver
Definition: PipelineManager.cpp:169
MoFEM::SmartPetscObj< DM >
MoFEM::DMMoFEMDuplicateDMCtx
PetscErrorCode DMMoFEMDuplicateDMCtx(DM dm, DM dm_duplicate)
Duplicate internal data struture.
Definition: DMMoFEM.cpp:180
MoFEM::Problem::getName
auto getName() const
Definition: ProblemsMultiIndices.hpp:372
MoFEM::PipelineManager::feSkeletonRhs
boost::shared_ptr< FEMethod > feSkeletonRhs
Element to assemble RHS side by integrating skeleton.
Definition: PipelineManager.hpp:300
MoFEM::PipelineManager::createTSIM2
SmartPetscObj< TS > createTSIM2(SmartPetscObj< DM > dm=nullptr)
Create TS (time) solver for second order equation in time.
Definition: PipelineManager.cpp:305
MoFEM::DMoFEMLoopFiniteElements
PetscErrorCode DMoFEMLoopFiniteElements(DM dm, const char fe_name[], MoFEM::FEMethod *method, CacheTupleWeakPtr cache_ptr=CacheTupleSharedPtr())
Executes FEMethod for finite elements in DM.
Definition: DMMoFEM.cpp:586
MoFEMFunctionReturn
#define MoFEMFunctionReturn(a)
Last executable line of each PETSc function used for error handling. Replaces return()
Definition: definitions.h:429
MOFEM_NOT_IMPLEMENTED
@ MOFEM_NOT_IMPLEMENTED
Definition: definitions.h:32
MoFEM::getDMTsCtx
auto getDMTsCtx(DM dm)
Get TS context data structure used by DM.
Definition: DMMoFEM.hpp:1141
MoFEMFunctionBegin
#define MoFEMFunctionBegin
First executable line of each MoFEM function, used for error handling. Final line of MoFEM functions ...
Definition: definitions.h:359
MoFEM::PipelineManager::IMEX
@ IMEX
Definition: PipelineManager.hpp:227
MoFEM::PipelineManager::feSkeletonExplicitRhs
boost::shared_ptr< FEMethod > feSkeletonExplicitRhs
Definition: PipelineManager.hpp:310
MoFEM::DMMoFEMSNESSetFunction
PetscErrorCode DMMoFEMSNESSetFunction(DM dm, const char fe_name[], MoFEM::FEMethod *method, MoFEM::BasicMethod *pre_only, MoFEM::BasicMethod *post_only)
set SNES residual evaluation function
Definition: DMMoFEM.cpp:718
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