Atom test for building problems.
static char help[] =
"...\n\n";
int main(
int argc,
char *argv[]) {
try {
moab::Core mb_instance;
moab::Interface &moab = mb_instance;
int rank;
MPI_Comm_rank(PETSC_COMM_WORLD, &rank);
PetscBool flg = PETSC_TRUE;
#if PETSC_VERSION_GE(3, 6, 4)
255, &flg);
#else
CHKERR PetscOptionsGetString(PETSC_NULL, PETSC_NULL,
"-my_file",
#endif
if (flg != PETSC_TRUE)
MB_TAG_DENSE);
CHKERR prb_mng_ptr->buildProblem(
"P1",
true);
CHKERR prb_mng_ptr->partitionProblem(
"P1");
CHKERR prb_mng_ptr->partitionFiniteElements(
"P1");
CHKERR prb_mng_ptr->partitionGhostDofs(
"P1");
MOFEM_LOG(
"WORLD", Sev::inform) <<
"Create matrix";
->createMPIAIJWithArrays<PetscGlobalIdx_mi_tag>(
"P1",
A);
auto fe_ptr = boost::make_shared<FEMethod>();
auto pre_proc_hook = [&]() {
};
auto post_proc_hook = [&]() {
};
auto op_hook = [&]() {
<< "Iterate finite element " << *(fe_ptr->numeredEntFiniteElementPtr);
auto row_dofs = fe_ptr->getRowDofsPtr();
for (auto &dof : *row_dofs)
MOFEM_LOG(
"WORLD", Sev::noisy) << *dof << endl;
};
fe_ptr->preProcessHook = pre_proc_hook;
fe_ptr->postProcessHook = post_proc_hook;
fe_ptr->operatorHook = op_hook;
MOFEM_LOG(
"WORLD", Sev::inform) <<
"Iterate finite elements";
auto vol_ptr = boost::make_shared<Vol>(m_field);
return 0;
};
};
vol_ptr->getOpPtrVector().push_back(
new Op());
MOFEM_LOG(
"WORLD", Sev::inform) <<
"Iterate volume finite elements";
}
return 0;
}
#define CATCH_ERRORS
Catch errors.
@ AINSWORTH_LEGENDRE_BASE
Ainsworth Cole (Legendre) approx. base .
#define MoFEMFunctionBegin
First executable line of each MoFEM function, used for error handling. Final line of MoFEM functions ...
#define MoFEMFunctionReturn(a)
Last executable line of each PETSc function used for error handling. Replaces return()
#define CHKERR
Inline error check.
virtual MoFEMErrorCode add_finite_element(const std::string &fe_name, enum MoFEMTypes bh=MF_EXCL, int verb=DEFAULT_VERBOSITY)=0
add finite element
virtual MoFEMErrorCode build_finite_elements(int verb=DEFAULT_VERBOSITY)=0
Build finite elements.
virtual MoFEMErrorCode modify_finite_element_add_field_col(const std::string &fe_name, const std::string name_row)=0
set field col which finite element use
virtual MoFEMErrorCode add_ents_to_finite_element_by_type(const EntityHandle entities, const EntityType type, const std::string &name, const bool recursive=true)=0
add entities to finite element
virtual MoFEMErrorCode modify_finite_element_add_field_data(const std::string &fe_name, const std::string name_filed)=0
set finite element field data
virtual MoFEMErrorCode modify_finite_element_add_field_row(const std::string &fe_name, const std::string name_row)=0
set field row which finite element use
virtual MoFEMErrorCode build_fields(int verb=DEFAULT_VERBOSITY)=0
virtual MoFEMErrorCode set_field_order(const EntityHandle meshset, const EntityType type, const std::string &name, const ApproximationOrder order, int verb=DEFAULT_VERBOSITY)=0
Set order approximation of the entities in the field.
virtual MoFEMErrorCode add_ents_to_field_by_type(const Range &ents, const EntityType type, const std::string &name, int verb=DEFAULT_VERBOSITY)=0
Add entities to field meshset.
#define MOFEM_LOG(channel, severity)
Log.
#define MOFEM_LOG_CHANNEL(channel)
Set and reset channel.
virtual MoFEMErrorCode loop_finite_elements(const std::string problem_name, const std::string &fe_name, FEMethod &method, boost::shared_ptr< NumeredEntFiniteElement_multiIndex > fe_ptr=nullptr, MoFEMTypes bh=MF_EXIST, CacheTupleWeakPtr cache_ptr=CacheTupleSharedPtr(), int verb=DEFAULT_VERBOSITY)=0
Make a loop over finite elements.
virtual MoFEMErrorCode add_problem(const std::string &name, enum MoFEMTypes bh=MF_EXCL, int verb=DEFAULT_VERBOSITY)=0
Add problem.
virtual MoFEMErrorCode modify_problem_ref_level_add_bit(const std::string &name_problem, const BitRefLevel &bit)=0
add ref level to problem
virtual MoFEMErrorCode modify_problem_add_finite_element(const std::string name_problem, const std::string &fe_name)=0
add finite element to problem, this add entities assigned to finite element to a particular problem
PetscErrorCode MoFEMErrorCode
MoFEM/PETSc error code.
std::bitset< BITREFLEVEL_SIZE > BitRefLevel
Bit structure attached to each entity identifying to what mesh entity is attached.
implementation of Data Operators for Forces and Sources
virtual MoFEMErrorCode build_adjacencies(const Range &ents, int verb=DEFAULT_VERBOSITY)=0
build adjacencies
virtual MoFEMErrorCode add_field(const std::string &name, const FieldSpace space, const FieldApproximationBase base, const FieldCoefficientsNumber nb_of_coefficients, const TagType tag_type=MB_TAG_SPARSE, const enum MoFEMTypes bh=MF_EXCL, int verb=DEFAULT_VERBOSITY)=0
Add field.
static MoFEMErrorCode Initialize(int *argc, char ***args, const char file[], const char help[])
Initializes the MoFEM database PETSc, MOAB and MPI.
static MoFEMErrorCode Finalize()
Checks for options to be called at the conclusion of the program.
Deprecated interface functions.
Data on single entity (This is passed as argument to DataOperator::doWork)
@ OPROWCOL
operator doWork is executed on FE rows &columns
Matrix manager is used to build and partition problems.
Problem manager is used to build and partition problems.
intrusive_ptr for managing petsc objects
MoFEMErrorCode getInterface(IFACE *&iface) const
Get interface refernce to pointer of interface.
Volume finite element base.
MoFEMErrorCode doWork(int side, EntityType type, EntitiesFieldData::EntData &data)
VolEle::UserDataOperator VolOp