14static char help[] =
"...\n\n";
16int main(
int argc,
char *argv[]) {
20 auto core_log = logging::core::get();
27 moab::Core mb_instance;
28 moab::Interface &moab = mb_instance;
30 MPI_Comm_rank(PETSC_COMM_WORLD, &rank);
32 PetscBool flg = PETSC_TRUE;
34#if PETSC_VERSION_GE(3, 6, 4)
41 if (flg != PETSC_TRUE) {
42 SETERRQ(PETSC_COMM_SELF, 1,
"*** ERROR -my_file (MESH FILE NEEDED)");
61 enum bases { AINSWORTH, DEMKOWICZ, LASTBASEOP };
62 const char *list_bases[] = {
"ainsworth",
"demkowicz"};
64 PetscInt choice_base_value = AINSWORTH;
66 LASTBASEOP, &choice_base_value, &flg);
67 if (flg == PETSC_TRUE) {
69 if (choice_base_value == AINSWORTH)
71 else if (choice_base_value == DEMKOWICZ)
80 const char *list_spaces[] = {
"hdiv",
"hcurl"};
82 PetscInt choice_space_value =
HDIV;
84 LASTSPACEOP, &choice_space_value, &flg);
85 if (flg == PETSC_TRUE) {
87 if (choice_space_value ==
HDIV)
89 else if (choice_space_value ==
HCURL)
164 "F2", UserDataOperator::OPROW),
165 elemData(elem_data) {}
170 if (CN::Dimension(type) == 3) {
172 getCoordsAtGaussPts() - getFaceCoordsAtGaussPts();
175 <<
"getCoordsAtGaussPts() " << getCoordsAtGaussPts();
177 <<
"getFaceCoordsAtGaussPts() " << getFaceCoordsAtGaussPts();
179 constexpr double eps = 1e-12;
180 if (norm_inf(diff) >
eps) {
181 MOFEM_LOG(
"ATOM_TEST", Sev::error) <<
"diff " << diff;
183 "Coordinates at integration pts are different");
189 const size_t nb_integration_pts = getGaussPts().size2();
192 auto t_to_do_dot = getFTensor1Normal();
194 auto s1 = getFTensor1Tangent1();
195 auto s2 = getFTensor1Tangent2();
196 t_to_do_dot(
i) = s1(
i) + s2(
i);
200 if (getFEMethod()->nInTheLoop == 0)
201 ptr_dot_elem_data = &elemData.dotNormalEleLeft;
203 ptr_dot_elem_data = &elemData.dotNormalEleRight;
204 auto &dot_elem_data = *ptr_dot_elem_data;
205 if (dot_elem_data.size() == 0) {
206 dot_elem_data.resize(nb_integration_pts,
false);
207 dot_elem_data.clear();
211 for (
size_t gg = 0; gg != nb_integration_pts; ++gg) {
213 for (
size_t bb = 0; bb != nb_dofs; ++bb) {
214 dot_elem_data(gg) += (t_to_do_dot(
i) * t_hdiv_base(
i)) * t_data;
227 "F2", UserDataOperator::OPROW),
228 volSideFe(m_field),
elemData(elem_data) {
230 auto jac_ptr = boost::make_shared<MatrixDouble>();
231 auto inv_jac_ptr = boost::make_shared<MatrixDouble>();
232 auto det_ptr = boost::make_shared<VectorDouble>();
243 new SkeletonFE::OpVolSide(
elemData));
251 const size_t nb_integration_pts =
getGaussPts().size2();
253 if (side == 0 && type == MBEDGE) {
254 elemData.dotNormalFace.resize(nb_integration_pts,
false);
263 auto s1 = getFTensor1Tangent1();
264 auto s2 = getFTensor1Tangent2();
265 t_to_do_dot(
i) = s1(
i) + s2(
i);
268 for (
size_t gg = 0; gg != nb_integration_pts; ++gg) {
270 for (
size_t bb = 0; bb != nb_dofs; ++bb) {
272 (t_to_do_dot(
i) * t_hdiv_base(
i)) * t_data;
279 if (CN::Dimension(type) == 2) {
281 elemData.dotNormalEleLeft.resize(0,
false);
282 elemData.dotNormalEleRight.resize(0,
false);
283 CHKERR loopSideVolumes(
"V1", volSideFe);
285 auto check_continuity_of_base = [&](
auto &vol_dot_data) {
287 if (vol_dot_data.size() !=
elemData.dotNormalFace.size())
289 "Inconsistent number of integration points");
290 const double eps = 1e-12;
291 for (
size_t gg = 0; gg != nb_integration_pts; ++gg) {
293 std::abs(vol_dot_data(gg) -
elemData.dotNormalFace(gg));
294 MOFEM_LOG(
"ATOM_TEST", Sev::noisy) <<
"Error: " << error;
297 "Inconsistency %3.4e != %3.4e", vol_dot_data(gg),
302 if (
elemData.dotNormalEleLeft.size() != 0)
304 else if (
elemData.dotNormalEleRight.size() != 0)
314 face_fe.
getRuleHook = [](int, int, int) {
return 1; };
323 auto cache_ptr = boost::make_shared<CacheTuple>();
326 for (
auto &ent_ptr : (*field_ents_ptr)) {
327 MOFEM_LOG(
"ATOM_TEST", Sev::verbose) << *ent_ptr;
328 for(
auto &
v : ent_ptr->getEntFieldData())
332 for (
auto &
v : ent_ptr->getEntFieldData())
#define CATCH_ERRORS
Catch errors.
FieldApproximationBase
approximation base
@ AINSWORTH_LEGENDRE_BASE
Ainsworth Cole (Legendre) approx. base .
#define MoFEMFunctionReturnHot(a)
Last executable line of each PETSc function used for error handling. Replaces return()
FieldSpace
approximation spaces
@ LASTSPACE
FieldSpace in [ 0, LASTSPACE )
@ HCURL
field with continuous tangents
@ HDIV
field with continuous normal traction
#define MoFEMFunctionBegin
First executable line of each MoFEM function, used for error handling. Final line of MoFEM functions ...
@ MOFEM_ATOM_TEST_INVALID
#define MoFEMFunctionReturn(a)
Last executable line of each PETSc function used for error handling. Replaces return()
#define CHKERR
Inline error check.
#define MoFEMFunctionBeginHot
First executable line of each MoFEM function, used for error handling. Final line of MoFEM functions ...
virtual const FieldEntity_multiIndex * get_field_ents() const =0
Get the field ents object.
virtual MoFEMErrorCode add_ents_to_finite_element_by_dim(const EntityHandle entities, const int dim, const std::string &name, const bool recursive=true)=0
add entities to finite element
virtual MoFEMErrorCode add_finite_element(const std::string &fe_name, enum MoFEMTypes bh=MF_EXCL, int verb=DEFAULT_VERBOSITY)=0
add finite element
virtual MoFEMErrorCode build_finite_elements(int verb=DEFAULT_VERBOSITY)=0
Build finite elements.
virtual MoFEMErrorCode modify_finite_element_add_field_col(const std::string &fe_name, const std::string name_row)=0
set field col which finite element use
virtual MoFEMErrorCode modify_finite_element_add_field_data(const std::string &fe_name, const std::string name_filed)=0
set finite element field data
virtual MoFEMErrorCode modify_finite_element_add_field_row(const std::string &fe_name, const std::string name_row)=0
set field row which finite element use
virtual MoFEMErrorCode build_fields(int verb=DEFAULT_VERBOSITY)=0
virtual MoFEMErrorCode add_ents_to_field_by_dim(const Range &ents, const int dim, const std::string &name, int verb=DEFAULT_VERBOSITY)=0
Add entities to field meshset.
virtual MoFEMErrorCode set_field_order(const EntityHandle meshset, const EntityType type, const std::string &name, const ApproximationOrder order, int verb=DEFAULT_VERBOSITY)=0
Set order approximation of the entities in the field.
static LoggerType & setLog(const std::string channel)
Set ans resset chanel logger.
#define MOFEM_LOG(channel, severity)
Log.
virtual MoFEMErrorCode loop_finite_elements(const std::string problem_name, const std::string &fe_name, FEMethod &method, boost::shared_ptr< NumeredEntFiniteElement_multiIndex > fe_ptr=nullptr, MoFEMTypes bh=MF_EXIST, CacheTupleWeakPtr cache_ptr=CacheTupleSharedPtr(), int verb=DEFAULT_VERBOSITY)=0
Make a loop over finite elements.
MoFEMErrorCode partitionGhostDofs(const std::string name, int verb=VERBOSE)
determine ghost nodes
MoFEMErrorCode buildProblem(const std::string name, const bool square_matrix, int verb=VERBOSE)
build problem data structures
MoFEMErrorCode partitionProblem(const std::string name, int verb=VERBOSE)
partition problem dofs (collective)
MoFEMErrorCode partitionFiniteElements(const std::string name, bool part_from_moab=false, int low_proc=-1, int hi_proc=-1, int verb=VERBOSE)
partition finite elements
virtual MoFEMErrorCode add_problem(const std::string &name, enum MoFEMTypes bh=MF_EXCL, int verb=DEFAULT_VERBOSITY)=0
Add problem.
virtual MoFEMErrorCode modify_problem_ref_level_add_bit(const std::string &name_problem, const BitRefLevel &bit)=0
add ref level to problem
virtual MoFEMErrorCode modify_problem_add_finite_element(const std::string name_problem, const std::string &fe_name)=0
add finite element to problem, this add entities assigned to finite element to a particular problem
FTensor::Index< 'i', SPACE_DIM > i
const double v
phase velocity of light in medium (cm/ns)
PetscErrorCode MoFEMErrorCode
MoFEM/PETSc error code.
std::bitset< BITREFLEVEL_SIZE > BitRefLevel
Bit structure attached to each entity identifying to what mesh entity is attached.
implementation of Data Operators for Forces and Sources
PetscErrorCode PetscOptionsGetEList(PetscOptions *, const char pre[], const char name[], const char *const *list, PetscInt next, PetscInt *value, PetscBool *set)
PetscErrorCode PetscOptionsGetString(PetscOptions *, const char pre[], const char name[], char str[], size_t size, PetscBool *set)
virtual MoFEMErrorCode cache_problem_entities(const std::string prb_name, CacheTupleWeakPtr cache_ptr)=0
Cache variables.
virtual MoFEMErrorCode build_adjacencies(const Range &ents, int verb=DEFAULT_VERBOSITY)=0
build adjacencies
virtual MoFEMErrorCode add_field(const std::string &name, const FieldSpace space, const FieldApproximationBase base, const FieldCoefficientsNumber nb_of_coefficients, const TagType tag_type=MB_TAG_SPARSE, const enum MoFEMTypes bh=MF_EXCL, int verb=DEFAULT_VERBOSITY)=0
Add field.
static MoFEMErrorCode Initialize(int *argc, char ***args, const char file[], const char help[])
Initializes the MoFEM database PETSc, MOAB and MPI.
static MoFEMErrorCode Finalize()
Checks for options to be called at the conclusion of the program.
Deprecated interface functions.
auto getFTensor1Normal()
get edge normal NOTE: it should be used only in 2D analysis
Data on single entity (This is passed as argument to DataOperator::doWork)
const VectorDouble & getFieldData() const
get dofs values
FTensor::Tensor0< FTensor::PackPtr< double *, 1 > > getFTensor0FieldData()
Resturn scalar files as a FTensor of rank 0.
FTensor::Tensor1< FTensor::PackPtr< double *, Tensor_Dim >, Tensor_Dim > getFTensor1N(FieldApproximationBase base)
Get base functions for Hdiv/Hcurl spaces.
FieldSpace & getSpace()
Get field space.
default operator for TRI element
MatrixDouble & getGaussPts()
matrix of integration (Gauss) points for Volume Element
boost::ptr_deque< UserDataOperator > & getOpPtrVector()
Use to push back operator for row operator.
RuleHookFun getRuleHook
Hook to get rule.
static boost::shared_ptr< SinkType > createSink(boost::shared_ptr< std::ostream > stream_ptr, std::string comm_filter)
Create a sink object.
static boost::shared_ptr< std::ostream > getStrmSelf()
Get the strm self object.
Set inverse jacobian to base functions.
Problem manager is used to build and partition problems.
MoFEMErrorCode getInterface(IFACE *&iface) const
Get interface refernce to pointer of interface.
default operator for TET element
Base volume element used to integrate on skeleton.
MoFEMErrorCode doWork(int side, EntityType type, EntitiesFieldData::EntData &data)
Operator for linear form, usually to calculate values on right hand side.